5.50 6928 6928 U 0 unclassified 94.50 119131 0 R 1 root 94.50 119131 2 R1 131567 cellular organisms 94.50 119128 876 D 2 Bacteria 39.42 49693 39 D1 1783272 Terrabacteria group 36.08 45481 114 P 1239 Bacillota 32.56 41049 691 C 186801 Clostridia 16.44 20729 196 O 186802 Eubacteriales 9.82 12381 1114 F 216572 Oscillospiraceae 3.41 4294 0 G 2842531 Solibaculum 3.41 4294 4294 S 2780922 Solibaculum mannosilyticum 1.76 2213 0 G 2172004 Lawsonibacter 1.76 2213 2213 S 2108523 Lawsonibacter asaccharolyticus 1.20 1515 1201 G 216851 Faecalibacterium 0.22 276 276 S 853 Faecalibacterium prausnitzii 0.02 26 26 S 3030638 Faecalibacterium taiwanense 0.01 7 0 G1 2646395 unclassified Faecalibacterium 0.00 3 3 S 2929492 Faecalibacterium sp. I3-3-33 0.00 3 3 S 2929493 Faecalibacterium sp. I3-3-89 0.00 1 1 S 2929489 Faecalibacterium sp. IP-3-29 0.00 5 5 S 411483 Faecalibacterium duncaniae 0.38 477 85 G 1263 Ruminococcus 0.14 179 179 S 1161942 Ruminococcus champanellensis 0.08 98 98 G1 2608920 unclassified Ruminococcus 0.04 51 51 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.02 25 25 S 2564099 Ruminococcus bovis 0.02 24 0 S 1264 Ruminococcus albus 0.02 24 24 S1 697329 Ruminococcus albus 7 = DSM 20455 0.01 15 15 S 438033 Ruminococcus gauvreauii 0.37 466 0 G 2304687 Petroclostridium 0.37 466 0 G1 2619260 unclassified Petroclostridium 0.37 466 466 S 3045146 Petroclostridium sp. X23 0.32 402 0 G 2038676 Paludihabitans 0.32 402 0 G1 2644543 unclassified Paludihabitans 0.32 402 402 S 3070656 Paludicola sp. MB14-C6 0.31 385 0 G 244127 Anaerotruncus 0.31 385 385 S 169435 Anaerotruncus colihominis 0.25 319 0 G 3048127 Thermocaproicibacter 0.25 319 319 S 2966552 Thermocaproicibacter melissae 0.22 279 0 G 2892397 Pusillibacter 0.22 279 279 S 2714358 Pusillibacter faecalis 0.21 266 0 G 459786 Oscillibacter 0.21 266 266 S 2763056 Oscillibacter hominis 0.18 222 173 G 2892396 Vescimonas 0.03 42 42 S 2714355 Vescimonas coprocola 0.01 7 7 S 2714353 Vescimonas fastidiosa 0.11 138 0 G 946234 Flavonifractor 0.11 138 138 S 292800 Flavonifractor plautii 0.11 135 58 G 292632 Subdoligranulum 0.06 76 76 S 214851 Subdoligranulum variabile 0.00 1 0 G1 512297 environmental samples 0.00 1 1 S 512298 uncultured Subdoligranulum sp. 0.04 56 12 G 35829 Acetivibrio 0.03 40 0 S 288965 Acetivibrio clariflavus 0.03 40 40 S1 720554 Acetivibrio clariflavus DSM 19732 0.00 4 4 S 1677857 Acetivibrio saccincola 0.02 31 0 G 1905344 Ruthenibacterium 0.02 31 31 S 1550024 Ruthenibacterium lactatiformans 0.02 19 2 G 2834348 Caproicibacterium 0.01 13 13 S 2666138 Caproicibacterium lactatifermentans 0.00 4 0 G1 2834349 unclassified Caproicibacterium 0.00 4 4 S 2994078 Caproicibacterium sp. BJN0003 0.01 18 0 G 253238 Ethanoligenens 0.01 18 18 S 253239 Ethanoligenens harbinense 0.01 14 14 G 3079925 Amygdalobacter 0.01 7 0 G 1637257 Mageeibacillus 0.01 7 0 S 884684 Mageeibacillus indolicus 0.01 7 7 S1 699246 Mageeibacillus indolicus UPII9-5 0.00 6 0 G 1508657 Ruminiclostridium 0.00 6 6 S 2488810 Ruminiclostridium herbifermentans 0.00 3 0 G 2304691 Thermoclostridium 0.00 3 3 S 1510 Thermoclostridium stercorarium 0.00 2 0 G 236752 Fastidiosipila 0.00 2 2 S 236753 Fastidiosipila sanguinis 4.41 5555 7 O1 538999 Eubacteriales incertae sedis 4.32 5448 0 G 1918454 Flintibacter 4.32 5448 0 G1 2610894 unclassified Flintibacter 4.32 5448 5448 S 2610895 Flintibacter sp. KGMB00164 0.06 81 0 G 1392389 Intestinimonas 0.06 81 81 S 1297617 Intestinimonas butyriciproducens 0.01 13 0 G 2717089 Massilistercora 0.01 13 13 S 2086584 Massilistercora timonensis 0.00 4 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 4 0 G 2886866 Sinanaerobacter 0.00 4 0 G1 2886867 unclassified Sinanaerobacter 0.00 4 4 S 3111540 Sinanaerobacter sp. ZZT-01 0.00 1 0 G 415014 Proteiniborus 0.00 1 0 G1 2622907 unclassified Proteiniborus 0.00 1 1 S 3050072 Proteiniborus sp. MB09-C3 0.00 1 1 G 1686313 Fenollaria 0.79 991 49 F 31979 Clostridiaceae 0.63 796 69 G 1485 Clostridium 0.25 311 311 S 1529 Clostridium cadaveris 0.06 81 0 G1 2614128 unclassified Clostridium 0.03 41 41 S 97138 Clostridium sp. MD294 0.01 15 15 S 411486 Clostridium sp. M62/1 0.01 12 12 S 1042156 Clostridium sp. SY8519 0.00 6 6 S 3070681 Clostridium sp. OS1-26 0.00 3 3 S 2779445 Clostridium sp. 'deep sea' 0.00 2 2 S 2681265 Clostridium sp. 16K-1-R1 0.00 1 1 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 2930219 Clostridium sp. BJN0001 0.05 67 67 S 46867 Clostridium chauvoei 0.05 65 64 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.05 62 62 S 182773 Clostridium isatidis 0.03 39 39 S 1504 Clostridium septicum 0.02 29 29 S 1502 Clostridium perfringens 0.01 16 16 S 1216932 Clostridium bornimense 0.01 11 11 S 1520 Clostridium beijerinckii 0.01 8 7 S 1491 Clostridium botulinum 0.00 1 0 S1 36831 Clostridium botulinum F 0.00 1 1 S2 441772 Clostridium botulinum F str. Langeland 0.01 8 8 S 1716543 Clostridium thermarum 0.00 6 6 S 84032 Clostridium thermosuccinogenes 0.00 5 5 S 1534 Clostridium kluyveri 0.00 5 5 S 94869 Clostridium gasigenes 0.00 3 0 S 1493 Clostridium cellulovorans 0.00 3 3 S1 573061 Clostridium cellulovorans 743B 0.00 3 3 S 36845 Clostridium intestinale 0.00 2 2 S 2068654 Clostridium fermenticellae 0.00 2 2 S 1497 Clostridium formicaceticum 0.00 1 1 S 2320868 Clostridium manihotivorum 0.00 1 1 S 1492 Clostridium butyricum 0.00 1 1 S 29341 Clostridium argentinense 0.00 1 0 S 238834 Clostridium estertheticum 0.00 1 1 S1 1552 Clostridium estertheticum subsp. estertheticum 0.09 112 0 G 1266 Sarcina 0.09 112 0 G1 2619470 unclassified Sarcina 0.09 112 112 S 2726954 Sarcina sp. JB2 0.02 23 0 G 49082 Candidatus Arthromitus 0.02 23 23 G1 2638829 unclassified Candidatus Arthromitus 0.00 6 0 G 44258 Caloramator 0.00 6 0 G1 2629145 unclassified Caloramator 0.00 6 6 S 2576307 Caloramator sp. E03 0.00 3 0 G 1769729 Hathewaya 0.00 3 3 S 1498 Hathewaya histolytica 0.00 2 0 G 1155385 Proteiniclasticum 0.00 2 0 G1 2630696 unclassified Proteiniclasticum 0.00 2 2 S 3036945 Proteiniclasticum sp. QWL-01 0.52 650 11 F 3085642 Butyricicoccaceae 0.48 609 0 G 1928820 Intestinibacillus 0.48 609 0 G1 2635293 unclassified Intestinibacillus 0.48 609 609 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.02 30 0 G 2048137 Agathobaculum 0.02 30 0 G1 2620324 unclassified Agathobaculum 0.02 30 30 S 3079302 Agathobaculum sp. NTUH-O15-33 0.36 450 1 F 186806 Eubacteriaceae 0.36 449 0 G 1730 Eubacterium 0.32 407 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.32 407 407 S 2841528 Eubacterium sp. MSJ-33 0.03 40 40 S 39496 Eubacterium ventriosum 0.00 2 2 S 2041044 Eubacterium maltosivorans 0.17 210 10 F 3082771 Acutalibacteraceae 0.11 136 0 G 1918385 Acutalibacter 0.11 136 136 S 1796620 Acutalibacter muris 0.05 64 60 G 1738645 Caproiciproducens 0.00 4 0 G1 2643836 unclassified Caproiciproducens 0.00 4 4 S 3030017 Caproiciproducens sp. CPB-2 0.16 196 0 F 2867375 Desulfallaceae 0.16 196 1 G 2867376 Desulfoscipio 0.15 195 0 S 102134 Desulfoscipio gibsoniae 0.15 195 195 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.03 39 0 F 186807 Peptococcaceae 0.01 16 0 G 2840454 Candidatus Formimonas 0.01 16 16 S 1761012 Candidatus Formimonas warabiya 0.01 11 0 G 2282742 Desulfofarcimen 0.01 11 0 S 58138 Desulfofarcimen acetoxidans 0.01 11 11 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.01 7 0 G 471826 Candidatus Desulforudis 0.01 7 7 S 471827 Candidatus Desulforudis audaxviator 0.00 4 0 G 2924872 Acididesulfobacillus 0.00 4 4 S 1561005 Acididesulfobacillus acetoxydans 0.00 1 0 G 2916693 Desulforamulus 0.00 1 0 S 1564 Desulforamulus ruminis 0.00 1 1 S1 696281 Desulforamulus ruminis DSM 2154 0.02 24 0 F 3046368 Aristaeellaceae 0.02 24 16 G 3046369 Aristaeella 0.01 8 8 S 3046382 Aristaeella hokkaidonensis 0.01 15 14 F 2937909 Desulfitobacteriaceae 0.00 1 1 G 36853 Desulfitobacterium 0.01 8 0 F 31984 Heliobacteriaceae 0.01 7 0 G 79598 Heliorestis 0.01 7 7 S 356322 Heliorestis convoluta 0.00 1 0 G 2831443 Heliomicrobium 0.00 1 0 S 35701 Heliomicrobium modesticaldum 0.00 1 1 S1 498761 Heliomicrobium modesticaldum Ice1 0.00 4 0 F 3047432 Maliibacteriaceae 0.00 4 0 G 3047433 Maliibacterium 0.00 4 4 S 2086585 Maliibacterium massiliense 0.00 3 0 F 2937910 Desulfotomaculaceae 0.00 3 0 G 1562 Desulfotomaculum 0.00 3 0 S 1565 Desulfotomaculum nigrificans 0.00 3 3 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 3 0 F 1491775 Proteinivoraceae 0.00 3 3 G 1491776 Proteinivorax 0.00 2 0 F 543349 Symbiobacteriaceae 0.00 2 0 G 2733 Symbiobacterium 0.00 2 0 S 2734 Symbiobacterium thermophilum 0.00 2 2 S1 292459 Symbiobacterium thermophilum IAM 14863 0.00 2 0 F 68298 Syntrophomonadaceae 0.00 2 0 G 862 Syntrophomonas 0.00 2 0 S 863 Syntrophomonas wolfei 0.00 2 0 S1 370885 Syntrophomonas wolfei subsp. wolfei 0.00 2 2 S2 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 14.81 18670 7 O 3085636 Lachnospirales 14.67 18487 1539 F 186803 Lachnospiraceae 2.97 3738 68 G 207244 Anaerostipes 2.04 2576 2574 S 649756 Anaerostipes hadrus 0.00 2 2 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.81 1026 1026 S 1229621 Anaerostipes rhamnosivorans 0.05 59 0 G1 2635253 unclassified Anaerostipes 0.05 59 59 S 3036926 Anaerostipes sp. PC18 0.01 9 9 S 105841 Anaerostipes caccae 1.32 1670 0 G 248744 Marvinbryantia 1.32 1670 0 S 168384 Marvinbryantia formatexigens 1.32 1670 1670 S1 478749 Marvinbryantia formatexigens DSM 14469 1.03 1296 546 G 572511 Blautia 0.52 659 1 S 40520 Blautia obeum 0.33 418 418 S1 411459 Blautia obeum ATCC 29174 0.19 240 240 S1 657314 Blautia obeum A2-162 0.02 24 24 S 1912897 Blautia argi 0.02 23 0 G1 2648079 unclassified Blautia 0.02 23 23 S 2479767 Blautia sp. SC05B48 0.02 20 0 S 53443 Blautia hydrogenotrophica 0.02 20 20 S1 476272 Blautia hydrogenotrophica DSM 10507 0.01 9 9 S 2779518 Blautia liquoris 0.00 6 6 S 89014 Blautia luti 0.00 5 5 S 2877527 Blautia parvula 0.00 4 4 S 33035 Blautia producta 0.96 1209 0 G 28050 Lachnospira 0.96 1209 1206 S 39485 Lachnospira eligens 0.00 3 3 S1 515620 [Eubacterium] eligens ATCC 27750 0.87 1103 0 G 1506553 Lachnoclostridium 0.51 641 641 S 29347 [Clostridium] scindens 0.31 390 390 S 1512 [Clostridium] symbiosum 0.05 64 0 S 66219 Lachnoclostridium phytofermentans 0.05 64 64 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 6 6 S 89153 [Clostridium] hylemonae 0.00 2 2 S 1871021 Lachnoclostridium phocaeense 0.86 1082 186 G 830 Butyrivibrio 0.70 880 880 S 45851 Butyrivibrio crossotus 0.01 10 0 S 43305 Butyrivibrio proteoclasticus 0.01 10 10 S1 515622 Butyrivibrio proteoclasticus B316 0.00 3 3 S 831 Butyrivibrio fibrisolvens 0.00 3 3 S 185008 Butyrivibrio hungatei 0.81 1016 238 G 841 Roseburia 0.40 510 510 S 301301 Roseburia hominis 0.21 261 0 G1 2637578 unclassified Roseburia 0.17 213 213 S 1261635 Roseburia sp. 831b 0.04 48 48 S 1261634 Roseburia sp. 499 0.01 7 7 S 166486 Roseburia intestinalis 0.75 945 0 G 3031933 Chordicoccus 0.75 945 945 S 2709410 Chordicoccus furentiruminis 0.61 775 63 G 1164882 Lachnoanaerobaculum 0.33 410 410 S 2490855 Lachnoanaerobaculum gingivalis 0.24 302 302 S 617123 Lachnoanaerobaculum umeaense 0.58 733 251 G 2316020 Mediterraneibacter 0.29 370 0 S 33039 [Ruminococcus] torques 0.29 370 370 S1 657313 [Ruminococcus] torques L2-14 0.05 66 0 S 46228 [Ruminococcus] lactaris 0.05 66 66 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.04 46 46 S 33038 Mediterraneibacter gnavus 0.45 573 0 G 2163168 Kineothrix 0.45 573 33 G1 2625420 unclassified Kineothrix 0.27 336 336 S 3070215 Kineothrix sp. MB12-C1 0.16 204 204 S 3123317 Kineothrix sp. IPX-CK 0.32 408 218 G 2719231 Lacrimispora 0.08 95 95 S 29375 Lacrimispora xylanolytica 0.03 41 41 S 384636 Lacrimispora xylanisolvens 0.03 39 0 G1 2719232 unclassified Lacrimispora 0.03 39 39 S 3151850 Lacrimispora sp. BS-2 0.01 13 0 S 29370 Lacrimispora sphenoides 0.01 13 13 S1 1297793 Lacrimispora sphenoides JCM 1415 0.00 2 2 S 84030 Lacrimispora saccharolytica 0.30 378 34 G 33042 Coprococcus 0.13 159 159 S 410072 Coprococcus comes 0.08 104 104 S 116085 Coprococcus catus 0.06 81 0 G1 2684943 unclassified Coprococcus 0.06 81 81 S 751585 Coprococcus sp. ART55/1 0.25 316 0 G 2569097 Anaerobutyricum 0.25 316 316 S 39488 Anaerobutyricum hallii 0.21 271 0 G 2944195 Qiania 0.21 271 271 S 2763669 Qiania dongpingensis 0.17 210 5 G 2719313 Enterocloster 0.16 200 200 S 208479 Enterocloster bolteae 0.00 3 0 S 333367 Enterocloster asparagiformis 0.00 3 3 S1 518636 [Clostridium] asparagiforme DSM 15981 0.00 2 2 S 1531 Enterocloster clostridioformis 0.16 205 158 G 1843210 Anaerocolumna 0.02 26 26 S 2696063 Anaerocolumna sedimenticola 0.02 21 0 G1 2642604 unclassified Anaerocolumna 0.01 10 10 S 3081750 Anaerocolumna sp. AGMB13020 0.00 6 6 S 3070997 Anaerocolumna sp. MB42-C2 0.00 5 5 S 3039116 Anaerocolumna sp. AGMB13025 0.15 184 0 G 189330 Dorea 0.09 114 114 S 39486 Dorea formicigenerans 0.06 70 70 S 88431 Dorea longicatena 0.12 145 0 G 1213720 Stomatobaculum 0.12 145 0 G1 2643635 unclassified Stomatobaculum 0.12 145 145 S 3059030 Stomatobaculum sp. F0698 0.11 135 0 G 1769710 Sellimonas 0.11 135 135 S 1653434 Sellimonas intestinalis 0.10 128 0 G 2944193 Simiaoa 0.10 128 128 S 2763672 Simiaoa sunii 0.09 116 0 G 1766253 Agathobacter 0.09 116 116 S 39491 Agathobacter rectalis 0.08 107 0 G 2944198 Wansuia 0.08 107 107 S 2763667 Wansuia hejianensis 0.07 90 0 G 3076670 Claveliimonas 0.07 90 90 S 3028070 Claveliimonas bilis 0.04 53 0 G 3088373 Chakrabartyella 0.04 53 53 S 2918914 Chakrabartyella piscis 0.03 32 0 G 1506577 Tyzzerella 0.03 32 32 S 36835 [Clostridium] colinum 0.01 10 0 G 2997360 Anaeropeptidivorans 0.01 10 10 S 2934315 Anaeropeptidivorans aminofermentans 0.00 5 0 G 46205 Pseudobutyrivibrio 0.00 5 5 S 185007 Pseudobutyrivibrio xylanivorans 0.00 4 0 G 3024823 Anaeromicropila 0.00 4 4 S 2785025 Anaeromicropila herbilytica 0.00 3 0 G 1649459 Hungatella 0.00 3 3 S 154046 Hungatella hathewayi 0.00 3 0 G 2888809 Novisyntrophococcus 0.00 3 3 S 2068655 Novisyntrophococcus fermenticellae 0.00 3 0 G 2383 Candidatus Epulonipiscium 0.00 3 3 S 420336 Candidatus Epulonipiscium viviparus 0.00 2 0 G 1663717 Herbinix 0.00 2 2 S 1679721 Herbinix luporum 0.08 101 0 F 3118652 Anaerotignaceae 0.08 101 0 G 2039240 Anaerotignum 0.08 100 0 S 28446 Anaerotignum propionicum 0.08 100 100 S1 991789 Anaerotignum propionicum DSM 1682 0.00 1 0 G1 2685769 unclassified Anaerotignum 0.00 1 1 S 3070814 Anaerotignum sp. MB30-C6 0.05 65 0 F 3018741 Cellulosilyticaceae 0.05 65 65 G 698776 Cellulosilyticum 0.01 9 0 F 2603322 Vallitaleaceae 0.01 8 0 G 2603323 Petrocella 0.01 8 8 S 2173034 Petrocella atlantisensis 0.00 1 0 G 1348611 Vallitalea 0.00 1 1 S 1185412 Vallitalea guaymasensis 0.00 1 0 F 1185407 Defluviitaleaceae 0.00 1 0 G 1185408 Defluviitalea 0.00 1 1 S 879970 Defluviitalea saccharophila 0.74 928 1 O 3082720 Peptostreptococcales 0.63 788 311 F 186804 Peptostreptococcaceae 0.19 239 225 G 1501226 Romboutsia 0.01 14 0 G1 2626894 unclassified Romboutsia 0.01 14 14 S 2708053 Romboutsia sp. 13368 0.08 103 0 G 1505657 Intestinibacter 0.08 103 103 S 261299 Intestinibacter bartlettii 0.07 93 11 G 1505652 Terrisporobacter 0.06 81 81 S 1460447 Terrisporobacter petrolearius 0.00 1 1 S 2813371 Terrisporobacter hibernicus 0.02 20 0 G 1870884 Clostridioides 0.02 20 16 S 1496 Clostridioides difficile 0.00 2 2 S1 479832 Clostridioides difficile QCD-76w55 0.00 2 2 S1 699033 Clostridioides difficile 2007855 0.01 14 0 G 1849822 Paraclostridium 0.01 14 14 S 1505 Paraclostridium sordellii 0.00 3 0 G 1257 Peptostreptococcus 0.00 3 3 S 3003601 Peptostreptococcus equinus 0.00 3 0 G 2743582 Peptacetobacter 0.00 3 3 S 89152 Peptacetobacter hiranonis 0.00 2 0 G 214904 Tepidibacter 0.00 2 2 S 3036126 Tepidibacter hydrothermalis 0.10 126 0 F 3030910 Anaerovoracaceae 0.08 96 0 G 1926556 Emergencia 0.08 95 0 G1 2642996 unclassified Emergencia 0.08 95 95 S 3114296 Emergencia sp. JLR.KK010 0.00 1 1 S 1776384 Emergencia timonensis 0.02 29 29 G 2060094 Aminipila 0.00 1 1 G 86331 Mogibacterium 0.01 7 0 F 3118654 Caminicellaceae 0.01 7 0 G 166484 Caminicella 0.01 7 7 S 166485 Caminicella sporogenes 0.00 4 0 F 3118656 Natronincolaceae 0.00 3 0 G 114627 Alkaliphilus 0.00 2 0 S 208226 Alkaliphilus metalliredigens 0.00 2 2 S1 293826 Alkaliphilus metalliredigens QYMF 0.00 1 0 G1 2646756 unclassified Alkaliphilus 0.00 1 1 S 2731219 Alkaliphilus sp. B6464 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.00 2 0 F 3118655 Filifactoraceae 0.00 2 0 G 44259 Filifactor 0.00 2 0 S 143361 Filifactor alocis 0.00 2 2 S1 546269 Filifactor alocis ATCC 35896 0.01 11 0 O 3082768 Christensenellales 0.01 11 0 F 990719 Christensenellaceae 0.01 11 4 G 990721 Christensenella 0.01 7 7 S 1805714 Christensenella massiliensis 0.01 7 0 O 53433 Halanaerobiales 0.00 5 0 F 3046412 Halothermotrichaceae 0.00 5 0 G 32636 Halothermothrix 0.00 5 0 S 31909 Halothermothrix orenii 0.00 5 5 S1 373903 Halothermothrix orenii H 168 0.00 2 1 F 972 Halanaerobiaceae 0.00 1 1 G 2330 Halanaerobium 0.00 6 0 O 3039167 Moorellales 0.00 6 0 F 3039168 Moorellaceae 0.00 5 0 G 44260 Moorella 0.00 5 5 S 676965 Moorella humiferrea 0.00 1 0 G 202949 Thermanaeromonas 0.00 1 0 S 161154 Thermanaeromonas toyohensis 0.00 1 1 S1 698762 Thermanaeromonas toyohensis ToBE 0.00 4 0 O 68295 Thermoanaerobacterales 0.00 2 0 F 186814 Thermoanaerobacteraceae 0.00 2 0 G 3051499 Aceticella 0.00 2 2 S 2755338 Aceticella autotrophica 0.00 2 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 2 0 G 252965 Mahella 0.00 2 0 S 252966 Mahella australiensis 0.00 2 2 S1 697281 Mahella australiensis 50-1 BON 0.00 3 0 C1 189325 Clostridia incertae sedis 0.00 3 0 G 3136917 Helicovermis 0.00 3 3 S 3065157 Helicovermis profundi 2.30 2904 16 C 91061 Bacilli 2.20 2768 5 O 186826 Lactobacillales 2.03 2555 20 F 33958 Lactobacillaceae 1.81 2285 2123 G 2767887 Ligilactobacillus 0.08 102 87 S 1624 Ligilactobacillus salivarius 0.01 15 15 S1 1194971 Ligilactobacillus salivarius str. Ren 0.02 21 21 S 1605 Ligilactobacillus animalis 0.02 19 10 S 1623 Ligilactobacillus ruminis 0.01 9 9 S1 1069534 Ligilactobacillus ruminis ATCC 27782 0.01 8 8 S 762833 Ligilactobacillus faecis 0.01 7 7 S 89059 Ligilactobacillus acidipiscis 0.00 5 1 S 1622 Ligilactobacillus murinus 0.00 4 4 S1 1235801 Ligilactobacillus murinus ASF361 0.17 220 29 G 1578 Lactobacillus 0.11 142 142 S 151781 Lactobacillus intestinalis 0.03 43 43 S 508451 Lactobacillus taiwanensis 0.00 3 3 G1 2620435 unclassified Lactobacillus 0.00 1 1 S 1596 Lactobacillus gasseri 0.00 1 1 S 147802 Lactobacillus iners 0.00 1 1 S 1579 Lactobacillus acidophilus 0.01 12 9 G 2742598 Limosilactobacillus 0.00 2 2 S 1598 Limosilactobacillus reuteri 0.00 1 1 S 1633 Limosilactobacillus vaginalis 0.00 6 6 G 46255 Weissella 0.00 2 2 G 1243 Leuconostoc 0.00 2 0 G 2767881 Fructilactobacillus 0.00 2 2 S 1614 Fructilactobacillus fructivorans 0.00 2 0 G 2767842 Lactiplantibacillus 0.00 2 2 S 1590 Lactiplantibacillus plantarum 0.00 2 0 G 2767878 Bombilactobacillus 0.00 2 2 S 1303590 Bombilactobacillus bombi 0.00 1 0 G 1253 Pediococcus 0.00 1 1 S 1255 Pediococcus pentosaceus 0.00 1 1 G 2767893 Lentilactobacillus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 0 S 1597 Lacticaseibacillus paracasei 0.00 1 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 1 1 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.06 81 78 F 186828 Carnobacteriaceae 0.00 2 0 G 117563 Granulicatella 0.00 2 2 S 46124 Granulicatella adiacens 0.00 1 0 G 29393 Dolosigranulum 0.00 1 1 S 29394 Dolosigranulum pigrum 0.06 76 0 F 1300 Streptococcaceae 0.06 71 38 G 1301 Streptococcus 0.01 9 9 S 1346 Streptococcus iniae 0.01 8 4 S 1308 Streptococcus thermophilus 0.00 3 3 S1 767463 Streptococcus thermophilus ND03 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.00 6 6 S 2490633 Streptococcus periodonticum 0.00 3 3 S 1314 Streptococcus pyogenes 0.00 2 0 G1 119603 Streptococcus dysgalactiae group 0.00 2 2 S 1336 Streptococcus equi 0.00 1 1 S 1811193 Streptococcus pantholopis 0.00 1 1 S 1309 Streptococcus mutans 0.00 1 0 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2664091 Streptococcus sp. zg-86 0.00 1 1 S 1341 Streptococcus ratti 0.00 1 1 S 1335 Streptococcus equinus 0.00 5 2 G 1357 Lactococcus 0.00 2 2 S 1363 Lactococcus garvieae 0.00 1 1 S 1358 Lactococcus lactis 0.04 47 0 F 81852 Enterococcaceae 0.03 44 4 G 1350 Enterococcus 0.03 40 38 S 1351 Enterococcus faecalis 0.00 2 2 S1 1201292 Enterococcus faecalis ATCC 29212 0.00 3 0 G 2737 Vagococcus 0.00 3 3 S 218144 Vagococcus carniphilus 0.00 4 1 F 186827 Aerococcaceae 0.00 3 3 G 1375 Aerococcus 0.10 120 8 O 1385 Bacillales 0.06 70 6 F 186817 Bacillaceae 0.03 32 0 G 1386 Bacillus 0.02 26 0 G1 653685 Bacillus subtilis group 0.02 23 0 G2 1938374 Bacillus amyloliquefaciens group 0.02 21 21 S 492670 Bacillus velezensis 0.00 2 2 S 1390 Bacillus amyloliquefaciens 0.00 2 1 S 1423 Bacillus subtilis 0.00 1 1 S1 86029 Bacillus subtilis subsp. natto 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.00 5 2 G1 86661 Bacillus cereus group 0.00 2 2 S 2026186 Bacillus paranthracis 0.00 1 1 S 1428 Bacillus thuringiensis 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 2841656 Bacillus sp. ZHX3 0.00 6 3 G 400634 Lysinibacillus 0.00 3 3 S 2086577 Lysinibacillus timonensis 0.00 5 5 G 2837504 Heyndrickxia 0.00 4 0 G 84406 Virgibacillus 0.00 2 2 S 447199 Virgibacillus salarius 0.00 2 2 S 1216297 Virgibacillus natechei 0.00 4 2 G 129337 Geobacillus 0.00 1 1 S 860353 Geobacillus proteiniphilus 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1963025 Geobacillus sp. 46C-IIa 0.00 3 0 G 45667 Halobacillus 0.00 3 3 S 45668 Halobacillus litoralis 0.00 3 0 G 2800373 Priestia 0.00 3 3 S 1404 Priestia megaterium 0.00 2 0 G 2675232 Neobacillus 0.00 2 0 G1 2675272 unclassified Neobacillus 0.00 2 2 S 3070676 Neobacillus sp. PS2-9 0.00 2 0 G 1329200 Fictibacillus 0.00 2 0 G1 2644029 unclassified Fictibacillus 0.00 2 2 S 2991053 Fictibacillus sp. KU28468 0.00 1 0 G 182709 Oceanobacillus 0.00 1 1 S 545501 Oceanobacillus oncorhynchi 0.00 1 0 G 3033930 Fervidibacillus 0.00 1 1 S 2980027 Fervidibacillus halotolerans 0.00 1 0 G 150247 Anoxybacillus 0.00 1 0 S 33934 Anoxybacillus flavithermus 0.00 1 1 S1 491915 Anoxybacillus flavithermus WK1 0.01 12 0 F 186818 Planococcaceae 0.01 8 8 G 1372 Planococcus 0.00 4 1 G 1569 Sporosarcina 0.00 3 3 S 1571 Sporosarcina ureae 0.01 9 0 F 90964 Staphylococcaceae 0.01 8 2 G 1279 Staphylococcus 0.00 5 5 S 1280 Staphylococcus aureus 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 1 1 G 2803850 Mammaliicoccus 0.00 5 0 F 186822 Paenibacillaceae 0.00 5 0 G 44249 Paenibacillus 0.00 4 4 S 1406 Paenibacillus polymyxa 0.00 1 1 G1 2044880 Paenibacillus sonchi group 0.00 5 0 F 186823 Alicyclobacillaceae 0.00 2 0 G 29330 Alicyclobacillus 0.00 2 2 S 1475485 Alicyclobacillus dauci 0.00 2 0 G 1502725 Effusibacillus 0.00 2 2 S 2743772 Effusibacillus dendaii 0.00 1 1 G 432330 Tumebacillus 0.00 4 0 F 186821 Sporolactobacillaceae 0.00 4 0 G 475230 Pullulanibacillus 0.00 4 0 G1 2640606 unclassified Pullulanibacillus 0.00 4 4 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 3 0 F 186824 Thermoactinomycetaceae 0.00 3 0 G 1677050 Novibacillus 0.00 3 3 S 1471761 Novibacillus thermophilus 0.00 3 0 F 539738 Gemellaceae 0.00 3 2 G 1378 Gemella 0.00 1 1 S 29391 Gemella morbillorum 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 1 0 G 33986 Exiguobacterium 0.00 1 1 S 1428684 Exiguobacterium alkaliphilum 1.00 1260 0 C 526524 Erysipelotrichia 1.00 1260 0 O 526525 Erysipelotrichales 0.63 793 2 F 128827 Erysipelotrichaceae 0.43 543 0 G 174708 Allobaculum 0.36 448 448 S 2834459 Allobaculum mucilyticum 0.08 95 0 G1 2623473 unclassified Allobaculum 0.08 95 95 S 2853432 Allobaculum sp. Allo2 0.18 233 0 G 1729679 Faecalibaculum 0.18 233 233 S 1702221 Faecalibaculum rodentium 0.01 7 0 G 118747 Bulleidia 0.01 7 0 G1 2704656 unclassified Bulleidia 0.01 7 7 S 2806552 Bulleidia sp. zg-1006 0.01 7 0 G 2749267 Amedibacterium 0.01 7 7 S 2583452 Amedibacterium intestinale 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1514105 Erysipelothrix larvae 0.26 324 0 F 2810280 Coprobacillaceae 0.16 202 0 G 2678885 Faecalibacillus 0.16 202 202 S 1982626 Faecalibacillus intestinalis 0.08 103 19 G 3025755 Thomasclavelia 0.06 72 72 S 1547 Thomasclavelia ramosa 0.01 8 0 G1 3025756 unclassified Thomasclavelia 0.01 8 8 S 1965571 Erysipelatoclostridium sp. An173 0.00 4 0 S 29348 Thomasclavelia spiroformis 0.00 4 4 S1 428126 Thomasclavelia spiroformis DSM 1552 0.02 19 0 G 2943184 Tannockella 0.02 19 19 S 2899121 Tannockella kyphosi 0.11 143 0 F 2810281 Turicibacteraceae 0.11 143 106 G 191303 Turicibacter 0.02 30 30 S 154288 Turicibacter sanguinis 0.00 6 0 G1 2638206 unclassified Turicibacter 0.00 4 4 S 3114695 Turicibacter sp. KK003 0.00 2 2 S 1712675 Turicibacter sp. H121 0.00 1 1 S 2963365 Turicibacter faecis 0.08 98 0 P1 84086 unclassified Bacillota 0.08 98 98 S 243899 endosymbiont 'TC1' of Trimyema compressum 0.03 43 0 C 909932 Negativicutes 0.02 29 0 O 1843489 Veillonellales 0.02 29 0 F 31977 Veillonellaceae 0.02 22 11 G 39948 Dialister 0.01 7 7 S 487173 Dialister succinatiphilus 0.00 4 4 S 39950 Dialister pneumosintes 0.01 7 6 G 29465 Veillonella 0.00 1 1 S 39777 Veillonella atypica 0.01 7 0 O 909929 Selenomonadales 0.01 7 0 F 1843491 Selenomonadaceae 0.00 4 0 G 970 Selenomonas 0.00 3 3 S 69823 Selenomonas sputigena 0.00 1 1 S 2754044 Selenomonas timonae 0.00 3 0 G 158846 Megamonas 0.00 3 3 S 437897 Megamonas funiformis 0.01 7 0 O 1843488 Acidaminococcales 0.01 7 0 F 909930 Acidaminococcaceae 0.01 7 1 G 33024 Phascolarctobacterium 0.00 6 6 S 33025 Phascolarctobacterium faecium 0.01 12 0 C 1737404 Tissierellia 0.01 10 0 O 1737405 Tissierellales 0.01 9 0 F 1570339 Peptoniphilaceae 0.00 6 0 G 2126548 Miniphocaeibacter 0.00 6 6 S 2931922 Miniphocaeibacter halophilus 0.00 2 0 G 150022 Finegoldia 0.00 2 2 S 1260 Finegoldia magna 0.00 1 0 G 543311 Parvimonas 0.00 1 1 S 33033 Parvimonas micra 0.00 1 0 F 2992719 Tepidimicrobiaceae 0.00 1 0 G 1354809 Keratinibaculum 0.00 1 1 S 1278232 Keratinibaculum paraultunense 0.00 2 0 C1 1737407 Tissierellia incertae sedis 0.00 2 0 G 190972 Sedimentibacter 0.00 2 1 G1 2649220 unclassified Sedimentibacter 0.00 1 1 S 3070995 Sedimentibacter sp. MB35-C1 0.00 1 0 P1 2840488 Bacillota incertae sedis 0.00 1 0 O 3071001 Caldicellulosiruptorales 0.00 1 0 F 3071002 Caldicellulosiruptoraceae 0.00 1 1 G 44000 Caldicellulosiruptor 3.27 4122 3 P 201174 Actinomycetota 2.60 3281 2 C 84998 Coriobacteriia 1.39 1746 344 O 84999 Coriobacteriales 0.91 1145 0 F 3153719 Kribbibacteriaceae 0.91 1145 0 G 2995122 Leptogranulimonas 0.91 1145 1145 S 2894156 Leptogranulimonas caecicola 0.14 182 40 F 1643824 Atopobiaceae 0.10 125 2 G 133925 Olsenella 0.09 119 0 S 133926 Olsenella uli 0.09 119 119 S1 633147 Olsenella uli DSM 7084 0.00 4 0 G1 2638792 unclassified Olsenella 0.00 4 4 S 712411 Olsenella sp. oral taxon 807 0.00 6 0 G 2847307 Thermophilibacter 0.00 6 6 S 2779519 Thermophilibacter immobilis 0.00 4 0 G 2767327 Fannyhessea 0.00 4 4 S 82135 Fannyhessea vaginae 0.00 4 1 G 2767353 Lancefieldella 0.00 3 0 G1 2978947 unclassified Lancefieldella 0.00 3 3 S 3022127 Lancefieldella sp. Marseille-Q7238 0.00 3 3 G 2082587 Parolsenella 0.06 75 0 F 84107 Coriobacteriaceae 0.06 75 2 G 102106 Collinsella 0.05 68 68 S 74426 Collinsella aerofaciens 0.00 5 5 S 147206 Collinsella stercoris 1.22 1533 0 O 1643822 Eggerthellales 1.22 1533 90 F 1643826 Eggerthellaceae 0.91 1150 0 G 2981344 Xiamenia 0.91 1150 1150 S 2682776 Xiamenia xianingshaonis 0.09 119 0 G 1981050 Phoenicibacter 0.09 119 119 S 1944646 Phoenicibacter congonensis 0.06 81 2 G 84111 Eggerthella 0.05 68 0 G1 2648737 unclassified Eggerthella 0.05 68 68 S 502558 Eggerthella sp. YY7918 0.01 7 7 S 84112 Eggerthella lenta 0.00 4 4 S 2690837 Eggerthella guodeyinii 0.06 71 66 G 447020 Adlercreutzia 0.00 4 4 S 446660 Adlercreutzia equolifaciens 0.00 1 1 S 2707299 Adlercreutzia hattorii 0.01 8 0 G 2815775 Berryella 0.00 5 5 S 1531429 Berryella intestinalis 0.00 3 3 S 2734634 Berryella wangjianweii 0.00 6 0 G 644652 Gordonibacter 0.00 3 0 S 471189 Gordonibacter pamelaeae 0.00 3 3 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.00 3 3 S 1335613 Gordonibacter urolithinfaciens 0.00 4 0 G 79603 Denitrobacterium 0.00 4 4 S 79604 Denitrobacterium detoxificans 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.00 1 0 G 84162 Cryptobacterium 0.00 1 0 S 84163 Cryptobacterium curtum 0.00 1 1 S1 469378 Cryptobacterium curtum DSM 15641 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.00 1 0 G 2005386 Arabiibacter 0.00 1 1 S 1870985 Arabiibacter massiliensis 0.65 825 3 C 1760 Actinomycetes 0.41 514 0 O 85004 Bifidobacteriales 0.41 514 1 F 31953 Bifidobacteriaceae 0.41 512 357 G 1678 Bifidobacterium 0.08 102 77 S 216816 Bifidobacterium longum 0.02 22 22 S1 1682 Bifidobacterium longum subsp. infantis 0.00 2 2 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S1 1931217 Bifidobacterium longum subsp. suillum 0.03 42 2 S 1694 Bifidobacterium pseudolongum 0.03 39 39 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.00 1 1 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.00 3 3 S 1689 Bifidobacterium dentium 0.00 3 0 S 28025 Bifidobacterium animalis 0.00 3 0 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 3 3 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 2 2 G1 2608897 unclassified Bifidobacterium 0.00 1 1 S 1686 Bifidobacterium catenulatum 0.00 1 0 S 1687 Bifidobacterium coryneforme 0.00 1 1 S1 1341694 Bifidobacterium [indicum] DSM 20214 = LMG 11587 0.00 1 1 S 28026 Bifidobacterium pseudocatenulatum 0.00 1 1 G 2701 Gardnerella 0.12 147 3 O 85006 Micrococcales 0.09 115 103 F 85023 Microbacteriaceae 0.00 4 1 G 33882 Microbacterium 0.00 3 3 S 3079935 Microbacterium limosum 0.00 3 2 G 55968 Leucobacter 0.00 1 1 S 2873270 Leucobacter tenebrionis 0.00 2 2 G 1705353 Aurantimicrobium 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2175655 Curtobacterium sp. MCPF17_052 0.00 1 1 G 33877 Agromyces 0.00 1 0 G 1434032 Pontimonas 0.00 1 1 S 1159327 Pontimonas salivibrio 0.02 22 10 F 1268 Micrococcaceae 0.00 5 0 G 32207 Rothia 0.00 4 4 S 43675 Rothia mucilaginosa 0.00 1 1 S 2047 Rothia dentocariosa 0.00 3 3 G 1742989 Glutamicibacter 0.00 2 2 G 57493 Kocuria 0.00 1 1 G 1663 Arthrobacter 0.00 1 0 G 57494 Nesterenkonia 0.00 1 1 S 1548602 Nesterenkonia pannonica 0.00 2 1 F 2805590 Ornithinimicrobiaceae 0.00 1 0 G 125287 Ornithinimicrobium 0.00 1 1 S 1288636 Ornithinimicrobium flavum 0.00 2 1 F 85021 Intrasporangiaceae 0.00 1 0 G 53355 Terrabacter 0.00 1 0 G1 2630222 unclassified Terrabacter 0.00 1 1 S 3108389 Terrabacter sp. C0L_2 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1184606 Austwickia 0.00 1 1 S 100225 Austwickia chelonae 0.00 1 0 F 1042322 Demequinaceae 0.00 1 1 G 577469 Demequina 0.00 1 0 O1 577468 Micrococcales incertae sedis 0.00 1 0 G 2888818 Pengzhenrongella 0.00 1 1 S 2819238 Pengzhenrongella sicca 0.06 76 2 O 85009 Propionibacteriales 0.04 46 7 F 85015 Nocardioidaceae 0.03 39 0 G 1839 Nocardioides 0.03 39 39 S 2663857 Nocardioides marmotae 0.02 28 2 F 31957 Propionibacteriaceae 0.02 25 0 G 1912216 Cutibacterium 0.02 24 24 S 1747 Cutibacterium acnes 0.00 1 1 S 33010 Cutibacterium avidum 0.00 1 0 G 1743 Propionibacterium 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.02 27 0 O 85007 Mycobacteriales 0.02 20 0 F 1653 Corynebacteriaceae 0.02 20 16 G 1716 Corynebacterium 0.00 2 2 S 108486 Corynebacterium falsenii 0.00 1 0 G1 2624378 unclassified Corynebacterium 0.00 1 1 S 2599641 Corynebacterium sp. sy039 0.00 1 0 S 441501 Corynebacterium massiliense 0.00 1 1 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 6 0 F 1762 Mycobacteriaceae 0.00 4 1 G 1763 Mycobacterium 0.00 2 0 G1 120793 Mycobacterium avium complex (MAC) 0.00 2 2 S 560555 Mycobacterium mantenii 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 78331 Mycobacterium canetti 0.00 2 0 G 1866885 Mycolicibacterium 0.00 2 2 S 370524 Mycolicibacterium pallens 0.00 1 0 F 2805586 Lawsonellaceae 0.00 1 0 G 1847725 Lawsonella 0.00 1 1 S 1528099 Lawsonella clevelandensis 0.02 22 0 O 85011 Kitasatosporales 0.02 22 1 F 2062 Streptomycetaceae 0.02 21 10 G 1883 Streptomyces 0.01 9 1 G1 2593676 unclassified Streptomyces 0.00 4 4 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2975702 Streptomyces sp. NBC_00287 0.00 1 1 S 2975728 Streptomyces sp. NBC_00370 0.00 1 1 S 1460244 Streptomyces sp. PCS3-D2 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 2184053 Streptomyces cadmiisoli 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.01 14 0 O 85010 Pseudonocardiales 0.01 14 2 F 2070 Pseudonocardiaceae 0.00 5 4 G 1835 Saccharopolyspora 0.00 1 1 S 60894 Saccharopolyspora spinosa 0.00 5 0 G 1847 Pseudonocardia 0.00 3 0 S 240495 Pseudonocardia dioxanivorans 0.00 3 3 S1 675635 Pseudonocardia dioxanivorans CB1190 0.00 2 2 G1 2619320 unclassified Pseudonocardia 0.00 1 0 G 2893576 Allosaccharopolyspora 0.00 1 1 S 2665642 Allosaccharopolyspora coralli 0.00 1 0 G 2071 Saccharothrix 0.00 1 0 G1 2593673 unclassified Saccharothrix 0.00 1 1 S 3231910 Saccharothrix sp. HUAS TT1 0.01 7 0 O 85012 Streptosporangiales 0.01 7 0 F 2012 Thermomonosporaceae 0.01 7 0 G 2019 Thermomonospora 0.01 7 0 S 2020 Thermomonospora curvata 0.01 7 7 S1 471852 Thermomonospora curvata DSM 43183 0.00 5 0 O 2037 Actinomycetales 0.00 5 1 F 2049 Actinomycetaceae 0.00 3 1 G 1654 Actinomyces 0.00 1 1 S 1655 Actinomyces naeslundii 0.00 1 1 S 1960083 Actinomyces gaoshouyii 0.00 1 0 G 2529408 Schaalia 0.00 1 0 G1 2691889 unclassified Schaalia 0.00 1 1 S 3059028 Schaalia sp. HMT-172 0.00 5 0 O 2039638 Candidatus Nanopelagicales 0.00 5 0 F 2162846 Candidatus Nanopelagicaceae 0.00 5 4 G 622681 Candidatus Planktophila 0.00 1 1 S 1884913 Candidatus Planktophila lacus 0.00 3 0 O 85008 Micromonosporales 0.00 3 0 F 28056 Micromonosporaceae 0.00 2 2 G 35753 Dactylosporangium 0.00 1 1 G 1873 Micromonospora 0.00 2 0 O 1643682 Geodermatophilales 0.00 2 1 F 85030 Geodermatophilaceae 0.00 1 0 G 1860 Geodermatophilus 0.00 1 0 S 1861 Geodermatophilus obscurus 0.00 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.01 12 0 C 84992 Acidimicrobiia 0.01 12 0 O 84993 Acidimicrobiales 0.01 10 0 F 633392 Iamiaceae 0.00 3 0 G 467975 Iamia 0.00 3 0 G1 2624035 unclassified Iamia 0.00 3 3 S 2722752 Iamia sp. SCSIO 61187 0.00 3 0 G 1648491 Aquihabitans 0.00 3 0 G1 2633173 unclassified Aquihabitans 0.00 3 3 S 2849779 Aquihabitans sp. G128 0.00 2 0 G 2789775 Actinomarinicola 0.00 2 2 S 2789776 Actinomarinicola tropica 0.00 2 0 G 3075137 Dermatobacter 0.00 2 2 S 2884263 Dermatobacter hominis 0.00 2 0 F 2448023 Ilumatobacteraceae 0.00 2 0 G 682522 Ilumatobacter 0.00 2 0 S 467094 Ilumatobacter coccineus 0.00 2 2 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1755823 Egicoccales 0.00 1 0 F 1755824 Egicoccaceae 0.00 1 0 G 1755825 Egicoccus 0.00 1 1 S 1670830 Egicoccus halophilus 0.02 26 4 P 544448 Mycoplasmatota 0.01 17 0 C 31969 Mollicutes 0.01 14 0 O 186329 Acholeplasmatales 0.01 14 10 F 2146 Acholeplasmataceae 0.00 3 0 G 2147 Acholeplasma 0.00 3 3 S 2148 Acholeplasma laidlawii 0.00 1 0 G 2903105 Alteracholeplasma 0.00 1 0 S 38986 Alteracholeplasma palmae 0.00 1 1 S1 1318466 Alteracholeplasma palmae J233 0.00 2 0 O 2085 Mycoplasmatales 0.00 2 0 F 2092 Mycoplasmataceae 0.00 2 2 G 2093 Mycoplasma 0.00 1 0 O 186328 Entomoplasmatales 0.00 1 0 F 2131 Spiroplasmataceae 0.00 1 1 G 2132 Spiroplasma 0.00 3 0 O 2790996 Mycoplasmoidales 0.00 3 3 F 2790998 Mycoplasmoidaceae 0.00 2 0 C 1912503 Candidatus Izimaplasma 0.00 2 0 O 2975519 Candidatus Izemoplasmatales 0.00 2 0 F 2975520 Candidatus Izemoplasmataceae 0.00 2 0 G 2975521 Candidatus Xianfuyuplasma 0.00 2 2 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.01 14 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.01 14 0 P 1117 Cyanobacteriota 0.01 14 2 C 3028117 Cyanophyceae 0.00 6 0 O 3079749 Leptolyngbyales 0.00 6 0 F 1890438 Leptolyngbyaceae 0.00 6 0 F1 3081713 Leptolyngbya group 0.00 6 0 G 47251 Leptolyngbya 0.00 5 0 G1 2650499 unclassified Leptolyngbya 0.00 5 5 S 2812896 Leptolyngbya sp. 7M 0.00 1 1 S 1184 Leptolyngbya boryana 0.00 2 0 O 1161 Nostocales 0.00 2 0 F 1892263 Hapalosiphonaceae 0.00 2 0 G 1190 Fischerella 0.00 2 0 G1 494603 unclassified Fischerella 0.00 2 2 S 2597771 Fischerella sp. JS2 0.00 1 1 O 307595 Gloeobacterales 0.00 1 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1150 Oscillatoriales 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.00 1 0 O 1890424 Synechococcales 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 1 S 32046 Synechococcus elongatus 0.00 1 0 O 2881377 Pseudanabaenales 0.00 1 0 F 1890436 Pseudanabaenaceae 0.00 1 0 G 1152 Pseudanabaena 0.00 1 0 S 1112103 Pseudanabaena galeata 0.00 1 1 S1 2602720 Pseudanabaena galeata CCNP1313 0.01 10 0 P 200795 Chloroflexota 0.01 8 0 C 301297 Dehalococcoidia 0.01 7 0 O 1202465 Dehalococcoidales 0.01 7 0 F 1202464 Dehalococcoidaceae 0.00 5 5 G 61434 Dehalococcoides 0.00 2 0 G 670486 Dehalogenimonas 0.00 2 0 G1 2638108 unclassified Dehalogenimonas 0.00 2 2 S 3166643 Dehalogenimonas sp. 4OHTPN 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 1 0 C 292625 Anaerolineae 0.00 1 0 O 292629 Anaerolineales 0.00 1 0 F 292628 Anaerolineaceae 0.00 1 0 G 2019482 Brevefilum 0.00 1 1 S 1986204 Brevefilum fermentans 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 P 1297 Deinococcota 0.00 1 0 C 188787 Deinococci 0.00 1 0 O 68933 Thermales 0.00 1 0 F 188786 Thermaceae 0.00 1 0 G 270 Thermus 0.00 1 0 S 56957 Thermus oshimai 0.00 1 1 S1 751945 Thermus oshimai JL-2 22.74 28660 0 D1 1783270 FCB group 22.73 28650 0 D2 68336 Bacteroidota/Chlorobiota group 22.73 28648 27 P 976 Bacteroidota 21.46 27054 2 C 200643 Bacteroidia 21.45 27045 232 O 171549 Bacteroidales 14.42 18179 714 F 2005473 Muribaculaceae 6.99 8810 459 G 2518495 Duncaniella 4.62 5828 5828 S 2518971 Duncaniella dubosii 2.00 2523 2414 G1 2649562 unclassified Duncaniella 0.09 109 109 S 2576606 Duncaniella sp. B8 4.64 5851 0 G 2518497 Paramuribaculum 4.64 5851 5851 S 2094151 Paramuribaculum intestinale 2.19 2756 685 G 1918540 Muribaculum 0.98 1238 1238 S 1796646 Muribaculum intestinale 0.66 833 833 S 2530390 Muribaculum gordoncarteri 0.04 48 0 G 2815786 Sodaliphilus 0.04 48 48 S 2606626 Sodaliphilus pleomorphus 4.02 5066 24 F 815 Bacteroidaceae 3.20 4031 452 G 816 Bacteroides 1.14 1431 1431 S 817 Bacteroides fragilis 1.12 1409 1409 S 820 Bacteroides uniformis 0.11 139 139 S 28116 Bacteroides ovatus 0.11 138 0 G1 2646097 unclassified Bacteroides 0.11 137 137 S 3117552 Bacteroides sp. MSB163 0.00 1 1 S 2162637 Bacteroides sp. PHL 2737 0.11 135 135 S 28113 Bacteroides heparinolyticus 0.08 96 96 S 28111 Bacteroides eggerthii 0.07 92 0 S 290053 Bacteroides helcogenes 0.07 92 92 S1 693979 Bacteroides helcogenes P 36-108 0.06 78 78 S 47678 Bacteroides caccae 0.01 17 17 S 338188 Bacteroides finegoldii 0.01 8 8 S 329854 Bacteroides intestinalis 0.01 7 7 S 291645 Bacteroides nordii 0.00 6 6 S 1796613 Bacteroides caecimuris 0.00 5 0 G1 139043 environmental samples 0.00 5 5 S 162156 uncultured Bacteroides sp. 0.00 5 5 S 2715212 Bacteroides faecium 0.00 5 5 S 28119 Bacteroides zoogleoformans 0.00 2 2 S 46506 Bacteroides stercoris 0.00 2 2 S 291644 Bacteroides salyersiae 0.00 1 1 S 371601 Bacteroides xylanisolvens 0.00 1 1 S 477666 Bacteroides graminisolvens 0.00 1 1 S 2136147 Bacteroides sedimenti 0.00 1 1 S 2650157 Bacteroides zhangwenhongii 0.80 1011 169 G 909656 Phocaeicola 0.52 658 658 S 821 Phocaeicola vulgatus 0.12 157 157 S 357276 Phocaeicola dorei 0.01 17 17 S 387090 Phocaeicola coprophilus 0.01 10 0 S 376805 Phocaeicola salanitronis 0.01 10 10 S1 667015 Phocaeicola salanitronis DSM 18170 0.84 1064 0 F 171550 Rikenellaceae 0.71 891 188 G 239759 Alistipes 0.16 206 206 S 214856 Alistipes finegoldii 0.14 174 174 S 1288121 Alistipes senegalensis 0.12 150 150 S 2585118 Alistipes communis 0.06 73 73 S 2585119 Alistipes dispar 0.02 27 27 S 2364787 Alistipes megaguti 0.02 19 0 G1 538948 environmental samples 0.02 19 19 S 538949 uncultured Alistipes sp. 0.02 19 0 G1 2608932 unclassified Alistipes 0.02 19 19 S 2662363 Alistipes sp. dk3624 0.01 15 15 S 626932 Alistipes indistinctus 0.01 12 0 S 328814 Alistipes shahii 0.01 12 12 S1 717959 Alistipes shahii WAL 8301 0.01 8 8 S 328813 Alistipes onderdonkii 0.14 173 0 G 1647173 Acetobacteroides 0.14 173 0 G1 1760810 environmental samples 0.14 173 173 S 1760811 uncultured Acetobacteroides sp. 0.67 848 1 F 2005525 Tannerellaceae 0.67 843 543 G 375288 Parabacteroides 0.17 219 219 S 1217282 Parabacteroides faecis 0.03 42 42 S 328812 Parabacteroides goldsteinii 0.02 29 29 S 46503 Parabacteroides merdae 0.00 5 5 S 823 Parabacteroides distasonis 0.00 4 4 S 2685834 Parabacteroides chongii 0.00 1 0 G1 2649774 unclassified Parabacteroides 0.00 1 1 S 2951805 Parabacteroides sp. AD58 0.00 4 4 G 195950 Tannerella 0.66 832 71 F 171552 Prevotellaceae 0.50 627 372 G 838 Prevotella 0.18 229 229 S 28128 Prevotella corporis 0.01 11 1 G1 2638335 unclassified Prevotella 0.01 7 0 S 652716 Prevotella sp. oral taxon 299 0.01 7 7 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 2 2 S 2691580 Prevotella sp. Rep29 0.00 1 1 S 2913621 Prevotella sp. E9-3 0.00 5 5 S 28132 Prevotella melaninogenica 0.00 4 0 S 52227 Prevotella dentalis 0.00 4 4 S1 908937 Prevotella dentalis DSM 3688 0.00 3 3 S 28131 Prevotella intermedia 0.00 2 2 S 2801997 Prevotella herbatica 0.00 1 1 S 28133 Prevotella nigrescens 0.08 100 0 G 577309 Paraprevotella 0.08 98 98 S 454154 Paraprevotella clara 0.00 2 0 S 454155 Paraprevotella xylaniphila 0.00 2 2 S1 762982 Paraprevotella xylaniphila YIT 11841 0.02 22 1 G 2974251 Segatella 0.02 21 15 S 165179 Segatella copri 0.00 6 6 S1 537011 Segatella copri DSM 18205 0.01 7 0 G 2884814 Pseudoprevotella 0.01 7 7 S 2133944 Pseudoprevotella muciniphila 0.00 4 0 G 558436 Xylanibacter 0.00 4 4 S 839 Xylanibacter ruminicola 0.00 1 0 G 2974257 Hoylesella 0.00 1 1 S 76123 Hoylesella enoeca 0.60 757 0 F 1853231 Odoribacteraceae 0.59 739 0 G 283168 Odoribacter 0.59 739 739 S 28118 Odoribacter splanchnicus 0.01 18 10 G 574697 Butyricimonas 0.00 5 5 S 544645 Butyricimonas virosa 0.00 3 3 S 1472417 Butyricimonas paravirosa 0.03 44 3 F 2005519 Barnesiellaceae 0.03 40 39 G 1348911 Coprobacter 0.00 1 1 S 1099853 Coprobacter fastidiosus 0.00 1 0 G 397864 Barnesiella 0.00 1 0 S 397865 Barnesiella viscericola 0.00 1 1 S1 880074 Barnesiella viscericola DSM 18177 0.01 14 0 F 2005520 Dysgonomonadaceae 0.01 12 0 G 156973 Dysgonomonas 0.01 10 10 G1 2630389 unclassified Dysgonomonas 0.00 2 2 S 45254 Dysgonomonas capnocytophagoides 0.00 2 0 G 294702 Proteiniphilum 0.00 2 2 S 1642647 Proteiniphilum saccharofermentans 0.01 9 0 F 171551 Porphyromonadaceae 0.01 8 1 G 836 Porphyromonas 0.00 3 3 S 28124 Porphyromonas endodontalis 0.00 2 0 G1 2645799 unclassified Porphyromonas 0.00 2 2 S 712435 Porphyromonas sp. oral taxon 275 0.00 1 0 S 28123 Porphyromonas asaccharolytica 0.00 1 1 S1 879243 Porphyromonas asaccharolytica DSM 20707 0.00 1 1 S 36874 Porphyromonas cangingivalis 0.00 1 0 G 1159323 Macellibacteroides 0.00 1 0 G1 1243006 environmental samples 0.00 1 1 S 1243007 uncultured Macellibacteroides sp. 0.01 7 0 O 1970189 Marinilabiliales 0.00 4 0 F 558415 Marinilabiliaceae 0.00 4 0 G 1193324 Alkalitalea 0.00 4 4 S 889453 Alkalitalea saponilacus 0.00 3 0 F 1471398 Prolixibacteraceae 0.00 3 0 G 1254401 Sunxiuqinia 0.00 3 0 G1 1573824 environmental samples 0.00 3 3 S 1573825 uncultured Sunxiuqinia sp. 1.22 1536 0 C 117743 Flavobacteriia 1.22 1536 19 O 200644 Flavobacteriales 1.13 1429 3 F 2762318 Weeksellaceae 1.13 1424 1 F1 2782232 Chryseobacterium group 1.13 1423 969 G 59732 Chryseobacterium 0.33 417 417 S 2929799 Chryseobacterium oryzae 0.01 16 0 G1 2593645 unclassified Chryseobacterium 0.00 6 6 S 2864040 Chryseobacterium sp. LJ668 0.00 5 5 S 3139392 Chryseobacterium sp. Chry.R1 0.00 2 2 S 1932669 Chryseobacterium sp. JV274 0.00 1 1 S 2039166 Chryseobacterium sp. 6424 0.00 1 1 S 2745153 Chryseobacterium sp. MYb264 0.00 1 1 S 2920939 Chryseobacterium sp. Y16C 0.01 8 8 S 2983606 Chryseobacterium fluminis 0.01 7 7 S 253 Chryseobacterium indologenes 0.00 2 2 S 192389 Chryseobacterium daecheongense 0.00 1 1 S 2759528 Chryseobacterium capnotolerans 0.00 1 1 S 1493872 Chryseobacterium shandongense 0.00 1 1 S 112234 Chryseobacterium joostei 0.00 1 1 S 3042315 Chryseobacterium gotjawalense 0.00 1 0 G 28250 Ornithobacterium 0.00 1 1 S 2497989 Candidatus Ornithobacterium hominis 0.00 1 0 G 1433995 Cruoricaptor 0.00 1 1 S 1118202 Cruoricaptor ignavus 0.07 83 4 F 49546 Flavobacteriaceae 0.06 73 0 G 216431 Croceibacter 0.06 73 73 S 313588 Croceibacter atlanticus 0.00 2 0 G 237 Flavobacterium 0.00 2 2 S 2906076 Flavobacterium covae 0.00 1 0 G 153265 Aequorivita 0.00 1 0 G1 2615031 unclassified Aequorivita 0.00 1 1 S 2494375 Aequorivita sp. H23M31 0.00 1 0 G 286104 Winogradskyella 0.00 1 1 S 2686077 Winogradskyella forsetii 0.00 1 0 G 221065 Kordia 0.00 1 0 G1 2685202 unclassified Kordia 0.00 1 1 S 2282170 Kordia sp. SMS9 0.00 1 0 G 83612 Psychroflexus 0.00 1 0 G1 196864 unclassified Psychroflexus 0.00 1 1 S 2777186 Psychroflexus sp. ALD_RP9 0.00 4 0 O1 313602 Flavobacteriales incertae sedis 0.00 4 0 G 336809 Candidatus Karelsulcia 0.00 4 4 S 336810 Candidatus Karelsulcia muelleri 0.00 1 0 F 1755828 Ichthyobacteriaceae 0.00 1 0 G 1755829 Ichthyobacterium 0.00 1 1 S 242600 Ichthyobacterium seriolicida 0.02 20 0 C 768503 Cytophagia 0.02 20 0 O 768507 Cytophagales 0.01 12 0 F 89373 Cytophagaceae 0.01 12 0 G 107 Spirosoma 0.01 12 12 S 2666025 Spirosoma endbachense 0.00 3 0 F 563798 Cyclobacteriaceae 0.00 2 0 G 246875 Algoriphagus 0.00 2 2 S 1727163 Algoriphagus sanaruensis 0.00 1 0 G 280472 Aquiflexum 0.00 1 0 S 280473 Aquiflexum balticum 0.00 1 1 S1 758820 Aquiflexum balticum DSM 16537 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 2 0 G 323449 Pontibacter 0.00 2 0 G1 2648980 unclassified Pontibacter 0.00 2 2 S 2571030 Pontibacter sp. SGAir0037 0.00 1 0 F 2762286 Fulvivirgaceae 0.00 1 0 G 1433993 Chryseolinea 0.00 1 1 S 2321403 Chryseolinea soli 0.00 1 0 F 2762306 Roseivirgaceae 0.00 1 0 G 290180 Roseivirga 0.00 1 1 S 333140 Roseivirga spongicola 0.00 1 0 F 3141702 Leadbetterellaceae 0.00 1 0 G 312278 Emticicia 0.00 1 0 G1 2627301 unclassified Emticicia 0.00 1 1 S 2916755 Emticicia sp. 21SJ11W-3 0.01 7 0 C 1853228 Chitinophagia 0.01 7 0 O 1853229 Chitinophagales 0.01 7 4 F 563835 Chitinophagaceae 0.00 1 1 G 379899 Niabella 0.00 1 0 G 2812019 Pseudocnuella 0.00 1 1 S 2502779 Pseudocnuella soli 0.00 1 0 G 1860196 Pseudobacter 0.00 1 1 S 661488 Pseudobacter ginsenosidimutans 0.00 3 0 C 117747 Sphingobacteriia 0.00 3 0 O 200666 Sphingobacteriales 0.00 3 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 0 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 3112958 Sphingobacterium sp. R2 0.00 1 0 G 376469 Olivibacter 0.00 1 1 G1 2632301 unclassified Olivibacter 0.00 1 0 G 1649482 Pseudopedobacter 0.00 1 0 S 151895 Pseudopedobacter saltans 0.00 1 1 S1 762903 Pseudopedobacter saltans DSM 12145 0.00 1 0 C 1937959 Saprospiria 0.00 1 0 O 1936988 Saprospirales 0.00 1 0 F 89374 Saprospiraceae 0.00 1 1 G 1007 Saprospira 0.00 1 0 P 1090 Chlorobiota 0.00 1 0 C 191410 Chlorobiia 0.00 1 0 O 191411 Chlorobiales 0.00 1 0 F 191412 Chlorobiaceae 0.00 1 0 G 1101 Prosthecochloris 0.00 1 0 G1 2632826 unclassified Prosthecochloris 0.00 1 1 S 1868325 Prosthecochloris sp. CIB 2401 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 0 O 1853224 Rhodothermales 0.00 1 0 F 563843 Rhodothermaceae 0.00 1 0 G 29548 Rhodothermus 0.00 1 1 S 29549 Rhodothermus marinus 0.01 8 0 P 142182 Gemmatimonadota 0.01 8 0 C 219685 Gemmatimonadia 0.01 8 0 O 219686 Gemmatimonadales 0.01 8 0 F 219687 Gemmatimonadaceae 0.00 5 3 G 173479 Gemmatimonas 0.00 1 0 S 173480 Gemmatimonas aurantiaca 0.00 1 1 S1 379066 Gemmatimonas aurantiaca T-27 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.00 3 0 G 1706036 Gemmatirosa 0.00 3 3 S 861299 Gemmatirosa kalamazoonensis 0.00 2 0 P 65842 Fibrobacterota 0.00 2 0 C 204430 Fibrobacteria 0.00 2 0 O 218872 Fibrobacterales 0.00 2 0 F 204431 Fibrobacteraceae 0.00 2 0 G 832 Fibrobacter 0.00 2 0 S 833 Fibrobacter succinogenes 0.00 2 0 S1 834 Fibrobacter succinogenes subsp. succinogenes 0.00 2 2 S2 59374 Fibrobacter succinogenes subsp. succinogenes S85 21.88 27581 16 P 1224 Pseudomonadota 17.98 22664 26 C 28211 Alphaproteobacteria 17.80 22439 7697 O 766 Rickettsiales 11.67 14716 9 F 942 Anaplasmataceae 11.56 14573 0 F1 952 Wolbachieae 11.56 14573 12063 G 953 Wolbachia 1.71 2156 504 G1 2640676 unclassified Wolbachia 0.51 647 647 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.14 173 173 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.11 134 134 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.05 63 63 S 3077922 Wolbachia endosymbiont (group A) of Ischnus inquisitorius 0.05 62 62 S 2954037 Wolbachia endosymbiont (group B) of Pammene fasciana 0.05 61 61 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.04 54 54 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.03 43 43 S 3066179 Wolbachia endosymbiont (group B) of Idaea biselata 0.03 36 36 S 2954056 Wolbachia endosymbiont (group A) of Sicus ferrugineus 0.03 33 33 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.03 32 32 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.02 27 27 S 2742717 Wolbachia endosymbiont of Wiebesia pumilae 0.02 27 27 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.02 24 24 S 2953988 Wolbachia endosymbiont (group A) of Bombylius major 0.02 21 21 S 3066154 Wolbachia endosymbiont (group A) of Pipizella viduata 0.02 21 21 S 3066148 Wolbachia endosymbiont (group A) of Myopa testacea 0.02 21 21 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.02 20 20 S 2954012 Wolbachia endosymbiont (group B) of Eucosma cana 0.02 20 20 S 2954051 Wolbachia endosymbiont (group B) of Protocalliphora azurea 0.01 18 18 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.01 17 17 S 3066174 Wolbachia endosymbiont (group A) of Ennomos erosarius 0.01 11 11 S 2954031 Wolbachia endosymbiont (group A) of Merzomyia westermanni 0.01 11 11 S 2953978 Wolbachia endosymbiont (group A) of Anomoia purmunda 0.01 9 9 S 2954021 Wolbachia endosymbiont (group B) of Ischnura elegans 0.01 9 9 S 2916816 Wolbachia endosymbiont of Howardula sp. 0.01 8 8 S 2953975 Wolbachia endosymbiont (group A) of Andrena dorsata 0.01 8 8 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.01 7 7 S 3066210 Wolbachia endosymbiont (group A) of Ophion ellenae 0.01 7 7 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.01 7 7 S 3066175 Wolbachia endosymbiont (group B) of Ennomos erosarius 0.01 7 7 S 3066157 Wolbachia endosymbiont (group B) of Villa cingulata 0.00 3 3 S 215173 Wolbachia endosymbiont of Bemisia tabaci 0.00 2 2 S 3066184 Wolbachia endosymbiont (group B) of Xanthorhoe designata 0.00 2 2 S 163164 Wolbachia endosymbiont of Drosophila melanogaster 0.00 1 0 S 77038 Wolbachia endosymbiont of Drosophila simulans 0.00 1 1 S1 1236908 Wolbachia endosymbiont of Drosophila simulans wNo 0.00 1 1 S 2953997 Wolbachia endosymbiont (group B) of Chorthippus parallelus 0.00 1 1 S 3066201 Wolbachia endosymbiont (group A) of Lasioglossum fulvicorne 0.00 1 1 S 3066200 Wolbachia endosymbiont (group A) of Gastracanthus pulcherrimus 0.00 1 1 S 2954057 Wolbachia endosymbiont (group A) of Sphaerophoria taeniata 0.00 1 1 S 3066173 Wolbachia endosymbiont (group B) of Elophila nymphaeata 0.00 1 1 S 80850 Wolbachia endosymbiont of Litomosoides sigmodontis 0.26 327 327 S 955 Wolbachia pipientis 0.02 27 27 S 1845000 Candidatus Wolbachia massiliensis 0.09 115 0 G 2883098 Candidatus Mesenet 0.09 115 0 G1 3066220 unclassified Candidatus Mesenet 0.09 115 115 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.01 12 8 G 33993 Neorickettsia 0.00 3 0 S 33994 Neorickettsia helminthoeca 0.00 3 3 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.00 1 0 S 951 Neorickettsia sennetsu 0.00 1 1 S1 222891 Neorickettsia sennetsu str. Miyayama 0.00 4 0 G 467749 Candidatus Neoehrlichia 0.00 4 4 S 89586 Neoehrlichia mikurensis 0.00 2 2 G 768 Anaplasma 0.00 1 0 G 943 Ehrlichia 0.00 1 1 G1 106178 canis group 0.02 19 0 F 775 Rickettsiaceae 0.01 18 5 F1 33988 Rickettsieae 0.01 8 0 G 69474 Orientia 0.01 8 8 S 784 Orientia tsutsugamushi 0.00 3 0 G 2601645 Candidatus Sneabacter 0.00 3 3 S 2601646 Candidatus Sneabacter namystus 0.00 2 0 G 780 Rickettsia 0.00 2 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) 0.00 1 1 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.00 1 0 G 2115980 Candidatus Phycorickettsia 0.00 1 1 S 2115978 Candidatus Phycorickettsia trachydisci 0.01 7 0 F 1328881 Candidatus Midichloriaceae 0.01 7 0 G 411566 Candidatus Midichloria 0.01 7 0 S 234827 Candidatus Midichloria mitochondrii 0.01 7 7 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.08 100 2 O 204441 Rhodospirillales 0.07 84 5 F 433 Acetobacteraceae 0.03 33 0 G 434 Acetobacter 0.03 33 0 G1 151157 Acetobacter subgen. Acetobacter 0.03 33 33 S 435 Acetobacter aceti 0.02 30 0 G 91914 Asaia 0.02 30 0 S 91915 Asaia bogorensis 0.02 30 30 S1 1231624 Asaia bogorensis NBRC 16594 0.01 10 6 G 1434011 Komagataeibacter 0.00 4 4 S 265960 Komagataeibacter nataicola 0.00 2 0 G 512381 Acidisoma 0.00 2 0 G1 2634065 unclassified Acidisoma 0.00 2 2 S 3040935 Acidisoma sp. PAMC 29798 0.00 2 0 G 2603324 Acidibrevibacterium 0.00 2 2 S 1969806 Acidibrevibacterium fodinaquatile 0.00 1 0 G 1519186 Nguyenibacter 0.00 1 1 S 1216886 Nguyenibacter vanlangensis 0.00 1 0 G 3027666 Aristophania 0.00 1 1 S 2697033 Aristophania vespae 0.01 10 5 F 41295 Rhodospirillaceae 0.00 5 0 G 111830 Defluviicoccus 0.00 5 5 S 111831 Defluviicoccus vanus 0.00 2 0 F 2829815 Azospirillaceae 0.00 1 1 G 191 Azospirillum 0.00 1 1 G 204447 Skermanella 0.00 2 0 F 2844601 Stellaceae 0.00 2 0 G 93 Stella 0.00 2 2 S 94 Stella humosa 0.03 38 0 O 356 Hyphomicrobiales 0.01 10 0 F 82115 Rhizobiaceae 0.01 9 5 F1 227290 Rhizobium/Agrobacterium group 0.00 3 2 G 379 Rhizobium 0.00 1 1 S 2081791 Rhizobium ruizarguesonis 0.00 1 0 G 357 Agrobacterium 0.00 1 1 S 2792015 Agrobacterium leguminum 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 28105 Sinorhizobium 0.00 1 1 S 382 Sinorhizobium meliloti 0.00 6 0 F 69277 Phyllobacteriaceae 0.00 5 5 G 245876 Nitratireductor 0.00 1 0 G 68287 Mesorhizobium 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2654249 Mesorhizobium sp. NBSH29 0.00 6 0 F 2831106 Devosiaceae 0.00 2 1 G 46913 Devosia 0.00 1 0 G1 196773 unclassified Devosia 0.00 1 1 S 1736675 Devosia sp. A16 0.00 2 0 G 1082930 Pelagibacterium 0.00 2 2 G1 2623280 unclassified Pelagibacterium 0.00 2 0 G 3064792 Mariluticola 0.00 2 2 S 2909283 Mariluticola halotolerans 0.00 4 2 F 41294 Nitrobacteraceae 0.00 2 1 G 374 Bradyrhizobium 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 3140246 Bradyrhizobium sp. B117 0.00 4 0 F 119045 Methylobacteriaceae 0.00 4 3 G 407 Methylobacterium 0.00 1 0 S 31998 Methylobacterium radiotolerans 0.00 1 1 S1 426355 Methylobacterium radiotolerans JCM 2831 0.00 3 0 F 45401 Hyphomicrobiaceae 0.00 3 2 G 81 Hyphomicrobium 0.00 1 0 G1 2619925 unclassified Hyphomicrobium 0.00 1 1 S 2682968 Hyphomicrobium sp. ghe19 0.00 2 0 F 335928 Xanthobacteraceae 0.00 2 0 G 556257 Pseudolabrys 0.00 2 0 G1 2638514 unclassified Pseudolabrys 0.00 2 2 S 2562284 Pseudolabrys sp. FHR47 0.00 1 0 F 45404 Beijerinckiaceae 0.00 1 1 G 120652 Methylocella 0.00 1 0 F 118882 Brucellaceae 0.00 1 0 F1 2826938 Brucella/Ochrobactrum group 0.00 1 0 G 234 Brucella 0.00 1 0 G1 2632610 unclassified Brucella 0.00 1 1 S 3142977 Brucella sp. BE17 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 212791 Enhydrobacter 0.00 1 0 G1 2632691 unclassified Enhydrobacter 0.00 1 1 S 1894999 Enhydrobacter sp. 0.03 32 3 O 204455 Rhodobacterales 0.02 28 1 F 31989 Paracoccaceae 0.02 27 21 G 265 Paracoccus 0.00 6 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 6 6 S 3030011 Paracoccus sp. S3-43 0.00 1 0 F 2854170 Roseobacteraceae 0.00 1 0 G 2919626 Alloyangia 0.00 1 1 S 311180 Alloyangia pacifica 0.01 11 1 O 204457 Sphingomonadales 0.01 10 1 F 41297 Sphingomonadaceae 0.01 7 6 G 13687 Sphingomonas 0.00 1 1 S 2071607 Sphingomonas rhizophila 0.00 2 0 G 165695 Sphingobium 0.00 2 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 627192 Sphingobium sp. SYK-6 0.00 1 1 S 1144307 Sphingobium sp. AP49 0.01 10 0 O 204458 Caulobacterales 0.01 10 0 F 76892 Caulobacteraceae 0.00 5 3 G 41275 Brevundimonas 0.00 1 1 S 2774189 Brevundimonas pondensis 0.00 1 1 S 2800818 Brevundimonas vitisensis 0.00 5 5 G 76890 Asticcacaulis 0.01 7 0 O 1921002 Holosporales 0.00 5 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 5 0 G 1521255 Candidatus Paracaedibacter 0.00 5 5 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 2 2 F 44746 Holosporaceae 0.00 1 0 O 255473 Parvularculales 0.00 1 0 F 255474 Parvularculaceae 0.00 1 0 G 1795639 Aquisalinus 0.00 1 1 S 1526572 Aquisalinus flavus 3.42 4307 48 C 1236 Gammaproteobacteria 2.14 2699 0 O 72274 Pseudomonadales 2.14 2699 6 F 135621 Pseudomonadaceae 2.13 2685 2433 G 286 Pseudomonas 0.06 78 0 G1 136843 Pseudomonas fluorescens group 0.03 42 0 S 47883 Pseudomonas synxantha 0.03 42 42 S1 96901 Pseudomonas synxantha BG33R 0.02 22 22 S 47878 Pseudomonas azotoformans 0.01 9 9 S 183795 Pseudomonas mediterranea 0.00 2 2 S 321662 Pseudomonas moraviensis 0.00 2 2 S 200450 Pseudomonas trivialis 0.00 1 0 S 294 Pseudomonas fluorescens 0.00 1 1 S1 1038922 Pseudomonas fluorescens Q2-87 0.06 72 7 G1 196821 unclassified Pseudomonas 0.02 25 25 S 2931382 Pseudomonas sp. PIA16 0.01 8 8 S 2954092 Pseudomonas sp. FP2335 0.00 4 4 S 1649877 Pseudomonas sp. CCOS 191 0.00 3 3 S 2901380 Pseudomonas sp. NIBR-H-19 0.00 3 3 S 2895471 Pseudomonas sp. B21-010 0.00 3 3 S 2954097 Pseudomonas sp. FP603 0.00 2 2 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 2 2 S 2954080 Pseudomonas sp. FP1762 0.00 2 2 S 2748080 Pseudomonas sp. ABC1 0.00 2 2 S 1027966 Pseudomonas sp. HR96 0.00 2 2 S 2892442 Pseudomonas sp. CIP-10 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 1856685 Pseudomonas sp. TCU-HL1 0.00 1 1 S 3035289 Pseudomonas sp. NyZ480 0.00 1 1 S 2895472 Pseudomonas sp. B21-012 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 1500686 Pseudomonas sp. Os17 0.00 1 1 S 3002903 Pseudomonas sp. BSw22131 0.00 1 1 S 2559074 Pseudomonas sp. S150 0.00 1 1 S 2976884 Pseudomonas sp. FJ2-5-13 0.02 24 2 G1 136845 Pseudomonas putida group 0.01 11 11 S 303 Pseudomonas putida 0.01 11 11 S 78327 Pseudomonas mosselii 0.02 22 0 G1 136841 Pseudomonas aeruginosa group 0.02 22 19 S 287 Pseudomonas aeruginosa 0.00 2 2 S1 381754 Pseudomonas aeruginosa PA7 0.00 1 1 S1 1340851 Pseudomonas aeruginosa RP73 0.01 12 12 S 46677 Pseudomonas agarici 0.01 9 0 G1 136842 Pseudomonas chlororaphis group 0.01 9 9 S 380021 Pseudomonas protegens 0.00 5 5 S 2738125 Pseudomonas hefeiensis 0.00 4 0 G1 136849 Pseudomonas syringae group 0.00 4 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 4 0 S 317 Pseudomonas syringae 0.00 3 3 S1 1357285 Pseudomonas syringae CC457 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 4 4 S 1198456 Pseudomonas guguanensis 0.00 3 3 S 2954098 Pseudomonas wuhanensis 0.00 3 3 S 2599595 Pseudomonas eucalypticola 0.00 3 3 S 244566 Pseudomonas lurida 0.00 2 2 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 2 2 S 2842346 Pseudomonas siliginis 0.00 2 2 S 930166 Pseudomonas brassicacearum 0.00 2 2 S 437900 Pseudomonas marincola 0.00 1 1 S 2894079 Pseudomonas oryziphila 0.00 1 1 S 1605838 Pseudomonas coleopterorum 0.00 1 1 S 1499686 Pseudomonas saudiphocaensis 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 2995174 Pseudomonas quebecensis 0.00 6 0 G 2901164 Stutzerimonas 0.00 6 0 G1 136846 Stutzerimonas stutzeri group 0.00 5 5 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 2 0 G 2758906 Entomomonas 0.00 2 0 G1 2785330 unclassified Entomomonas 0.00 2 2 S 2930213 Entomomonas sp. E2T0 0.91 1147 32 O 91347 Enterobacterales 0.76 955 99 F 543 Enterobacteriaceae 0.46 575 0 G 561 Escherichia 0.46 575 513 S 562 Escherichia coli 0.05 61 61 S1 316435 Escherichia coli Nissle 1917 0.00 1 1 S1 1446600 Escherichia coli O15:H18 0.14 171 1 G 544 Citrobacter 0.13 170 170 S 2971264 Citrobacter enshiensis 0.04 51 0 G 547 Enterobacter 0.04 51 0 G1 354276 Enterobacter cloacae complex 0.03 42 42 S 299767 Enterobacter ludwigii 0.00 5 5 S 158836 Enterobacter hormaechei 0.00 1 0 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 1 S 208224 Enterobacter kobei 0.00 1 1 S 1812935 Enterobacter roggenkampii 0.00 1 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.02 29 0 F1 2890311 Klebsiella/Raoultella group 0.02 29 0 G 570 Klebsiella 0.02 28 20 S 573 Klebsiella pneumoniae 0.01 8 8 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S 1134687 Klebsiella michiganensis 0.02 23 1 G 590 Salmonella 0.02 22 2 S 28901 Salmonella enterica 0.02 20 0 S1 59201 Salmonella enterica subsp. enterica 0.01 7 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 4 4 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 2 2 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 1 1 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.00 4 2 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 2 2 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 4 4 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 1 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 1 1 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 2 0 G 1330545 Lelliottia 0.00 2 2 S 61646 Lelliottia amnigena 0.00 2 0 G 1330547 Kosakonia 0.00 2 2 S 208223 Kosakonia cowanii 0.00 1 0 G 1177214 Candidatus Profftia 0.00 1 1 S 1987921 Candidatus Profftia lariciata 0.00 1 0 G 702 Plesiomonas 0.00 1 1 S 703 Plesiomonas shigelloides 0.00 1 1 F1 36866 unclassified Enterobacteriaceae 0.07 88 20 F 1903414 Morganellaceae 0.04 46 25 G 586 Providencia 0.01 12 12 S 158850 Providencia rustigianii 0.01 8 0 S 516075 Providencia sneebia 0.01 8 8 S1 1141660 Providencia sneebia DSM 19967 0.00 1 0 G1 2633465 unclassified Providencia 0.00 1 1 S 3015951 Providencia sp. 21OH12SH02B-Prov 0.02 19 0 G 581 Morganella 0.02 19 19 S 582 Morganella morganii 0.00 2 0 G 637 Arsenophonus 0.00 2 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 1 1 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 1 0 G 583 Proteus 0.00 1 1 S 584 Proteus mirabilis 0.04 54 24 F 1903411 Yersiniaceae 0.02 19 14 G 613 Serratia 0.00 2 2 S 614 Serratia liquefaciens 0.00 1 1 S 61652 Serratia rubidaea 0.00 1 0 S 82996 Serratia plymuthica 0.00 1 1 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 138074 Serratia symbiotica 0.01 11 5 G 629 Yersinia 0.00 4 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 4 0 S 632 Yersinia pestis 0.00 3 3 S1 748678 Yersinia pestis str. Pestoides B 0.00 1 1 S1 1035377 Yersinia pestis A1122 0.00 1 0 S 29483 Yersinia aldovae 0.00 1 1 S1 1453495 Yersinia aldovae 670-83 0.00 1 1 S 29486 Yersinia ruckeri 0.01 10 0 F 2812006 Bruguierivoracaceae 0.01 10 0 G 84565 Sodalis 0.01 8 8 S 2697027 Sodalis ligni 0.00 2 0 S 1486991 Candidatus Sodalis pierantonius 0.00 2 2 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.01 7 1 F 1903409 Erwiniaceae 0.00 3 2 G 53335 Pantoea 0.00 1 1 G1 2630326 unclassified Pantoea 0.00 2 0 G 551 Erwinia 0.00 2 0 G1 2622719 unclassified Erwinia 0.00 2 2 S 215689 Erwinia sp. Ejp617 0.00 1 0 G 32199 Buchnera 0.00 1 1 S 9 Buchnera aphidicola 0.00 1 1 F 1903412 Hafniaceae 0.10 129 0 O 135625 Pasteurellales 0.10 129 3 F 712 Pasteurellaceae 0.10 121 1 G 724 Haemophilus 0.09 112 111 S 729 Haemophilus parainfluenzae 0.00 1 1 S1 888828 Haemophilus parainfluenzae ATCC 33392 0.00 6 6 S 735 Haemophilus parahaemolyticus 0.00 1 1 S 726 Haemophilus haemolyticus 0.00 1 1 S 730 [Haemophilus] ducreyi 0.00 2 1 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 1 0 G 75984 Mannheimia 0.00 1 1 S 85402 Mannheimia granulomatis 0.00 1 0 G 155493 Gallibacterium 0.00 1 1 S 750 Gallibacterium anatis 0.00 1 0 G 1960084 Rodentibacter 0.00 1 1 S 1796644 Rodentibacter caecimuris 0.08 102 0 O 135623 Vibrionales 0.08 102 2 F 641 Vibrionaceae 0.07 94 78 G 662 Vibrio 0.01 7 1 G1 717610 Vibrio harveyi group 0.00 2 2 S 663 Vibrio alginolyticus 0.00 2 0 G2 2315253 Vibrio diabolicus subgroup 0.00 2 2 S 50719 Vibrio diabolicus 0.00 1 1 S 669 Vibrio harveyi 0.00 1 1 S 670 Vibrio parahaemolyticus 0.00 2 2 S 666 Vibrio cholerae 0.00 1 1 S 1824638 Vibrio japonicus 0.00 1 1 S 687 Vibrio gazogenes 0.00 1 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2587862 Vibrio aquimaris 0.00 1 1 S 28172 Vibrio metschnikovii 0.00 1 0 S 55601 Vibrio anguillarum 0.00 1 1 S1 42323 Vibrio anguillarum serovar O1 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 4 4 G 51366 Salinivibrio 0.00 2 0 G 657 Photobacterium 0.00 1 1 S 38293 Photobacterium damselae 0.00 1 1 S 553611 Photobacterium leiognathi 0.05 65 0 O 135614 Lysobacterales 0.05 62 0 F 32033 Lysobacteraceae 0.03 44 1 G 338 Xanthomonas 0.03 43 43 S 29447 Xanthomonas albilineans 0.01 9 8 G 40323 Stenotrophomonas 0.00 1 0 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 5 0 G 68 Lysobacter 0.00 2 2 S 2763317 Lysobacter solisilvae 0.00 1 1 S 84531 Lysobacter antibioticus 0.00 1 1 S 2795387 Lysobacter arenosi 0.00 1 0 G1 2635362 unclassified Lysobacter 0.00 1 1 S 2904252 Lysobacter sp. KIS68-7 0.00 2 0 G 490567 Arenimonas 0.00 2 2 S 370777 Arenimonas daejeonensis 0.00 1 1 G 83614 Luteimonas 0.00 1 1 G 83618 Pseudoxanthomonas 0.00 3 0 F 1775411 Rhodanobacteraceae 0.00 2 2 G 75309 Rhodanobacter 0.00 1 0 G 242605 Luteibacter 0.00 1 1 S 2589080 Luteibacter pinisoli 0.04 50 0 O 135619 Oceanospirillales 0.04 47 8 F 28256 Halomonadaceae 0.03 35 1 G 2745 Halomonas 0.03 33 32 G1 2609666 unclassified Halomonas 0.00 1 1 S 2785909 Halomonas sp. A40-4 0.00 1 1 S 29570 Halomonas meridiana 0.00 4 0 G 404432 Salinicola 0.00 4 4 S 1949083 Salinicola endophyticus 0.00 2 0 F 135620 Oceanospirillaceae 0.00 1 0 G 28253 Marinomonas 0.00 1 1 S 2773454 Marinomonas algicola 0.00 1 1 G 187492 Thalassolituus 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 0 G 59753 Alcanivorax 0.00 1 0 G1 2638842 unclassified Alcanivorax 0.00 1 1 S 1872427 Alcanivorax sp. 0.03 35 0 O 2887326 Moraxellales 0.03 35 0 F 468 Moraxellaceae 0.02 31 22 G 469 Acinetobacter 0.00 6 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 6 6 S 470 Acinetobacter baumannii 0.00 3 3 S 29430 Acinetobacter haemolyticus 0.00 3 3 G 475 Moraxella 0.00 1 0 G 497 Psychrobacter 0.00 1 0 G1 196806 unclassified Psychrobacter 0.00 1 1 S 3064892 Psychrobacter sp. van23A 0.01 11 1 O 135622 Alteromonadales 0.00 6 0 F 267888 Pseudoalteromonadaceae 0.00 6 5 G 53246 Pseudoalteromonas 0.00 1 1 S 2774154 Pseudoalteromonas ostreae 0.00 4 0 F 267890 Shewanellaceae 0.00 4 3 G 22 Shewanella 0.00 1 1 G1 196818 unclassified Shewanella 0.00 6 0 O 135624 Aeromonadales 0.00 5 0 F 84642 Aeromonadaceae 0.00 3 1 G 642 Aeromonas 0.00 1 1 S 648 Aeromonas caviae 0.00 1 1 S 644 Aeromonas hydrophila 0.00 1 0 G 43947 Tolumonas 0.00 1 1 S 43948 Tolumonas auensis 0.00 1 0 G 225143 Oceanisphaera 0.00 1 1 S 1903694 Oceanisphaera avium 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.00 3 0 O 1775403 Nevskiales 0.00 3 3 F 568386 Nevskiaceae 0.00 3 0 O 135613 Chromatiales 0.00 2 0 F 1046 Chromatiaceae 0.00 1 0 G 67575 Rheinheimera 0.00 1 0 G1 115860 unclassified Rheinheimera 0.00 1 1 S 3072790 Rheinheimera sp. MMS21-TC3 0.00 1 0 G 2796146 Candidatus Nitrosacidococcus 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 1 0 F 72276 Ectothiorhodospiraceae 0.00 1 1 G 1335745 Spiribacter 0.00 2 0 O 72273 Thiotrichales 0.00 2 2 F 135616 Piscirickettsiaceae 0.00 2 0 O 1706369 Cellvibrionales 0.00 1 0 F 1706371 Cellvibrionaceae 0.00 1 0 G 2425 Teredinibacter 0.00 1 1 S 2426 Teredinibacter turnerae 0.00 1 0 F 1706372 Halieaceae 0.00 1 0 G 3040948 Candidatus Paraluminiphilus 0.00 1 1 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 2 2 C1 118884 Gammaproteobacteria incertae sedis 0.00 1 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 1 S 66969 Legionella waltersii 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 1 G 261963 Kangiella 0.00 1 0 O 3060226 Steroidobacterales 0.00 1 0 F 2689614 Steroidobacteraceae 0.00 1 0 G 469322 Steroidobacter 0.00 1 1 S 465721 Steroidobacter denitrificans 0.47 593 10 C 28216 Betaproteobacteria 0.42 533 4 O 80840 Burkholderiales 0.31 385 2 F 119060 Burkholderiaceae 0.20 246 236 G 48736 Ralstonia 0.01 7 0 G1 3116862 Ralstonia solanacearum species complex 0.00 6 6 S 305 Ralstonia solanacearum 0.00 1 1 S 1310165 Ralstonia pseudosolanacearum 0.00 2 0 G1 209769 unclassified Ralstonia 0.00 2 2 S 2880990 Ralstonia sp. RS650 0.00 1 1 S 105219 Ralstonia mannitolilytica 0.11 133 21 G 106589 Cupriavidus 0.09 108 108 S 82633 Cupriavidus pauculus 0.00 3 3 S 164546 Cupriavidus taiwanensis 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.00 3 1 G 32008 Burkholderia 0.00 2 0 G1 87882 Burkholderia cepacia complex 0.00 1 1 S 95485 Burkholderia stabilis 0.00 1 1 S 152500 Burkholderia dolosa 0.00 1 0 G 2038280 Robbsia 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.06 77 0 F 995019 Sutterellaceae 0.06 75 0 G 1918598 Turicimonas 0.06 75 75 S 1796652 Turicimonas muris 0.00 1 0 G 40544 Sutterella 0.00 1 1 S 2494234 Sutterella megalosphaeroides 0.00 1 0 G 1980697 Duodenibacillus 0.00 1 1 S 1852381 Duodenibacillus massiliensis 0.03 36 3 F 80864 Comamonadaceae 0.01 17 3 G 283 Comamonas 0.01 13 13 S 225991 Comamonas aquatica 0.00 1 1 S 363952 Comamonas thiooxydans 0.00 5 0 G 34072 Variovorax 0.00 5 4 G1 663243 unclassified Variovorax 0.00 1 1 S 1795631 Variovorax sp. PAMC 28711 0.00 5 0 G 1436289 Candidatus Symbiobacter 0.00 5 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 5 5 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 3 3 G 80865 Delftia 0.00 3 0 G 665874 Limnohabitans 0.00 3 3 G1 2626134 unclassified Limnohabitans 0.01 15 0 F 506 Alcaligenaceae 0.01 12 12 G 507 Alcaligenes 0.00 1 0 G 517 Bordetella 0.00 1 1 S 521 Bordetella avium 0.00 1 0 G 1472344 Basilea 0.00 1 0 S 1472345 Basilea psittacipulmonis 0.00 1 1 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 1 0 G 305976 Pusillimonas 0.00 1 0 G1 2640016 unclassified Pusillimonas 0.00 1 1 S 2716226 Pusillimonas sp. DMV24BSW_D 0.01 9 1 F 75682 Oxalobacteraceae 0.00 4 2 F1 2895353 Telluria group 0.00 1 0 G 34069 Telluria 0.00 1 1 S 34071 Telluria mixta 0.00 1 0 G 149698 Massilia 0.00 1 1 S 457921 Massilia varians 0.00 2 1 G 963 Herbaspirillum 0.00 1 1 S 92645 Herbaspirillum frisingense 0.00 1 0 G 29580 Janthinobacterium 0.00 1 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 0 G 401469 Undibacterium 0.00 1 1 G1 2630295 unclassified Undibacterium 0.01 7 1 F 2975441 Sphaerotilaceae 0.00 4 1 G 196013 Caldimonas 0.00 3 3 S 376175 Schlegelella aquatica 0.00 1 0 G 93681 Roseateles 0.00 1 1 S 76731 Roseateles depolymerans 0.00 1 0 G 316612 Methylibium 0.00 1 0 S 105560 Methylibium petroleiphilum 0.00 1 1 S1 420662 Methylibium petroleiphilum PM1 0.02 29 0 O 32003 Nitrosomonadales 0.02 20 0 F 2008793 Sterolibacteriaceae 0.01 18 0 G 378210 Methyloversatilis 0.01 18 0 G1 2639971 unclassified Methyloversatilis 0.01 18 18 S 1842540 Methyloversatilis sp. RAC08 0.00 1 1 G 311181 Denitratisoma 0.00 1 0 G 3050898 Sulfuricystis 0.00 1 1 S 2211108 Sulfuricystis multivorans 0.00 4 0 F 2803844 Usitatibacteraceae 0.00 4 3 G 2803845 Usitatibacter 0.00 1 1 S 2732487 Usitatibacter palustris 0.00 2 0 F 2008790 Thiobacillaceae 0.00 2 0 G 1938335 Sulfuritortus 0.00 2 2 S 1914471 Sulfuritortus calidifontis 0.00 1 0 F 90627 Gallionellaceae 0.00 1 0 G 2249462 Ferrigenium 0.00 1 1 S 1682490 Ferrigenium kumadai 0.00 1 1 F 206379 Nitrosomonadaceae 0.00 1 0 F 2772226 Sulfuricellaceae 0.00 1 1 G 1778653 Sulfuriferula 0.01 11 0 O 206389 Rhodocyclales 0.00 6 0 F 2008794 Zoogloeaceae 0.00 2 2 G 12960 Azoarcus 0.00 2 0 G 33057 Thauera 0.00 2 0 G1 2609274 unclassified Thauera 0.00 2 2 S 3142262 Thauera sp. JM12B12 0.00 2 0 G 2891324 Pseudothauera 0.00 2 2 S 2184083 Pseudothauera hydrothermalis 0.00 4 2 F 2008795 Azonexaceae 0.00 2 0 G 73029 Dechloromonas 0.00 2 2 S 281362 Dechloromonas denitrificans 0.00 1 0 F 75787 Rhodocyclaceae 0.00 1 0 G 551759 Aromatoleum 0.00 1 1 S 76116 Aromatoleum petrolei 0.01 10 0 O 206351 Neisseriales 0.01 8 6 F 481 Neisseriaceae 0.00 1 1 G 482 Neisseria 0.00 1 0 G 299568 Uruburuella 0.00 1 1 S 252130 Uruburuella suis 0.00 2 2 F 2897177 Chitinibacteraceae 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 7.22 9100 0 P 200940 Thermodesulfobacteriota 7.21 9088 0 C 3031449 Desulfovibrionia 7.21 9088 5 O 213115 Desulfovibrionales 7.21 9083 8 F 194924 Desulfovibrionaceae 7.03 8859 0 G 3126915 Taurinivorans 7.03 8859 8859 S 2787751 Taurinivorans muris 0.14 175 33 G 872 Desulfovibrio 0.11 133 133 S 44742 Desulfovibrio fairfieldensis 0.00 5 5 S 1725232 Candidatus Desulfovibrio trichonymphae 0.00 4 4 S 876 Desulfovibrio desulfuricans 0.03 32 0 G 2802295 Nitratidesulfovibrio 0.02 31 31 S 881 Nitratidesulfovibrio vulgaris 0.00 1 1 S 2604158 Nitratidesulfovibrio liaohensis 0.01 7 0 G 2909705 Oleidesulfovibrio 0.01 7 0 S 58180 Oleidesulfovibrio alaskensis 0.01 7 7 S1 207559 Oleidesulfovibrio alaskensis G20 0.00 1 0 G 1981028 Mailhella 0.00 1 0 G1 1981030 environmental samples 0.00 1 1 S 1981031 uncultured Mailhella sp. 0.00 1 1 G 2794998 Maridesulfovibrio 0.01 9 2 C 3031651 Desulfuromonadia 0.00 5 0 O 3031668 Geobacterales 0.00 5 2 F 213422 Geobacteraceae 0.00 2 0 G 115782 Trichlorobacter 0.00 2 2 S 313985 Trichlorobacter lovleyi 0.00 1 0 G 28231 Geobacter 0.00 1 1 S 345632 Geobacter pickeringii 0.00 2 0 O 69541 Desulfuromonadales 0.00 2 0 F 213421 Desulfuromonadaceae 0.00 2 2 G 890 Desulfuromonas 0.00 2 0 C 3031451 Desulfobulbia 0.00 2 0 O 3024411 Desulfobulbales 0.00 2 0 F 2886822 Desulfocapsaceae 0.00 2 0 G 53318 Desulfocapsa 0.00 2 0 S 65555 Desulfocapsa sulfexigens 0.00 2 2 S1 1167006 Desulfocapsa sulfexigens DSM 10523 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 0 O 188710 Thermodesulfobacteriales 0.00 1 0 F 3031464 Thermodesulfatatoraceae 0.00 1 0 G 241192 Thermodesulfatator 0.00 1 0 S 171695 Thermodesulfatator indicus 0.00 1 1 S1 667014 Thermodesulfatator indicus DSM 15286 1.99 2513 0 D1 1783257 PVC group 1.99 2510 0 P 74201 Verrucomicrobiota 1.99 2508 0 C 203494 Verrucomicrobiia 1.99 2507 0 O 48461 Verrucomicrobiales 1.99 2507 0 F 1647988 Akkermansiaceae 1.99 2507 439 G 239934 Akkermansia 1.63 2049 2049 S 239935 Akkermansia muciniphila 0.01 10 0 G1 2608915 unclassified Akkermansia 0.01 10 10 S 3040764 Akkermansia sp. N21116 0.01 7 7 S 2927224 Akkermansia massiliensis 0.00 2 2 S 1679444 Akkermansia glycaniphila 0.00 1 0 O 134621 Limisphaerales 0.00 1 0 F 3050006 Fontisphaeraceae 0.00 1 0 G 3050007 Fontisphaera 0.00 1 1 S 2974023 Fontisphaera persica 0.00 2 1 C 414999 Opitutia 0.00 1 0 O 415000 Opitutales 0.00 1 0 F 134623 Opitutaceae 0.00 1 0 G 2028344 Ereboglobus 0.00 1 1 S 1796921 Ereboglobus luteus 0.00 3 0 P 203682 Planctomycetota 0.00 2 0 C 203683 Planctomycetia 0.00 1 0 O 2691354 Pirellulales 0.00 1 0 F 2691357 Pirellulaceae 0.00 1 0 G 123 Pirellula 0.00 1 0 S 125 Pirellula staleyi 0.00 1 1 S1 530564 Pirellula staleyi DSM 6068 0.00 1 0 O 2691355 Gemmatales 0.00 1 0 F 1914233 Gemmataceae 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.00 1 0 C 2897345 Candidatus Uabimicrobiia 0.00 1 0 O 2897347 Candidatus Uabimicrobiales 0.00 1 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 1 0 G 2897349 Candidatus Uabimicrobium 0.00 1 1 S 2596890 Candidatus Uabimicrobium amorphum 0.26 327 0 P 29547 Campylobacterota 0.26 327 0 C 3031852 Epsilonproteobacteria 0.26 327 0 O 213849 Campylobacterales 0.26 327 0 F 72293 Helicobacteraceae 0.26 327 90 G 209 Helicobacter 0.16 201 201 S 213 Helicobacter cinaedi 0.02 19 19 S 76936 Helicobacter typhlonius 0.01 12 12 S 135569 Helicobacter apodemus 0.00 2 2 S 212 Helicobacter acinonychis 0.00 1 1 S 210 Helicobacter pylori 0.00 1 0 S 35817 Helicobacter heilmannii 0.00 1 1 S1 1216962 Helicobacter heilmannii ASB1.4 0.00 1 1 S 157268 Helicobacter winghamensis 0.11 143 0 P 203691 Spirochaetota 0.11 143 1 C 203692 Spirochaetia 0.11 138 0 O 136 Spirochaetales 0.11 138 0 F 2845253 Treponemataceae 0.11 138 132 G 157 Treponema 0.00 4 4 S 2787628 Treponema peruense 0.00 1 1 S 744515 Treponema ruminis 0.00 1 1 S 409322 Treponema pedis 0.00 4 0 O 1643688 Leptospirales 0.00 4 0 F 170 Leptospiraceae 0.00 2 1 G 171 Leptospira 0.00 1 0 G1 2633828 unclassified Leptospira 0.00 1 1 S 1513297 Leptospira sp. GIMC2001 0.00 2 0 G 338321 Turneriella 0.00 2 0 S 29510 Turneriella parva 0.00 2 2 S1 869212 Turneriella parva DSM 21527 0.09 112 0 D1 2323 Bacteria incertae sedis 0.09 112 0 D2 1783234 Bacteria candidate phyla 0.09 112 8 P 95818 Candidatus Saccharibacteria 0.08 104 0 C 2093818 Candidatus Saccharimonadia 0.08 104 0 O 2093825 Candidatus Saccharimonadales 0.08 104 0 F 2171986 Candidatus Saccharimonadaceae 0.08 104 0 G 1331051 Candidatus Saccharimonas 0.08 104 104 S 1332188 Candidatus Saccharimonas aalborgensis 0.06 77 0 P 200930 Deferribacterota 0.06 77 0 C 68337 Deferribacteres 0.06 77 0 O 191393 Deferribacterales 0.06 77 0 F 2945020 Mucispirillaceae 0.06 77 0 G 248038 Mucispirillum 0.06 77 0 S 248039 Mucispirillum schaedleri 0.06 77 77 S1 1379858 Mucispirillum schaedleri ASF457 0.02 30 0 P 57723 Acidobacteriota 0.01 16 0 C 204432 Terriglobia 0.01 12 0 O 204433 Terriglobales 0.01 7 0 F 204434 Acidobacteriaceae 0.00 4 0 G 388463 Edaphobacter 0.00 4 0 G1 2637509 unclassified Edaphobacter 0.00 4 4 S 2763071 Edaphobacter sp. 4G125 0.00 2 0 G 33973 Acidobacterium 0.00 2 0 S 33075 Acidobacterium capsulatum 0.00 2 2 S1 240015 Acidobacterium capsulatum ATCC 51196 0.00 1 0 G 940557 Granulicella 0.00 1 0 S 940614 Granulicella mallensis 0.00 1 1 S1 682795 Granulicella mallensis MP5ACTX8 0.00 5 0 F 3121618 Candidatus Korobacteraceae 0.00 5 0 G 658061 Candidatus Korobacter 0.00 5 0 S 658062 Candidatus Korobacter versatilis 0.00 5 5 S1 204669 Candidatus Koribacter versatilis Ellin345 0.00 4 0 O 332160 Bryobacterales 0.00 4 0 F 1962910 Bryobacteraceae 0.00 4 4 G 1649475 Paludibaculum 0.01 11 0 C 1813735 Vicinamibacteria 0.01 11 0 O 2910145 Vicinamibacterales 0.01 11 0 F 2211325 Vicinamibacteraceae 0.01 11 11 G 2004797 Luteitalea 0.00 3 0 C 533205 Holophagae 0.00 3 0 O 533206 Acanthopleuribacterales 0.00 3 0 F 533207 Acanthopleuribacteraceae 0.00 3 0 G 2915177 Sulfidibacter 0.00 3 3 S 2818388 Sulfidibacter corallicola 0.01 7 0 P 2818505 Myxococcota 0.00 5 0 C 32015 Myxococcia 0.00 5 0 O 29 Myxococcales 0.00 5 0 O1 80811 Cystobacterineae 0.00 2 0 F 31 Myxococcaceae 0.00 2 1 G 83461 Corallococcus 0.00 1 1 S 35 Corallococcus macrosporus 0.00 2 0 F 1524215 Anaeromyxobacteraceae 0.00 2 2 G 161492 Anaeromyxobacter 0.00 1 0 F 39 Archangiaceae 0.00 1 0 G 40 Stigmatella 0.00 1 0 S 41 Stigmatella aurantiaca 0.00 1 1 S1 378806 Stigmatella aurantiaca DW4/3-1 0.00 2 0 P1 3031711 Polyangia 0.00 2 0 O 3031712 Polyangiales 0.00 1 0 F 49 Polyangiaceae 0.00 1 0 G 50 Chondromyces 0.00 1 1 S 52 Chondromyces crocatus 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.00 5 0 P 40117 Nitrospirota 0.00 3 0 C 203693 Nitrospiria 0.00 3 0 O 189778 Nitrospirales 0.00 3 0 F 189779 Nitrospiraceae 0.00 3 1 G 1234 Nitrospira 0.00 2 2 S 1325564 Nitrospira japonica 0.00 2 0 C 2811502 Thermodesulfovibrionia 0.00 2 0 O 2811503 Thermodesulfovibrionales 0.00 2 0 F 2811505 Dissulfurispiraceae 0.00 2 0 G 2811506 Dissulfurispira 0.00 2 2 S 2715679 Dissulfurispira thermophila 0.00 4 0 P 32066 Fusobacteriota 0.00 4 0 C 203490 Fusobacteriia 0.00 4 0 O 203491 Fusobacteriales 0.00 2 0 F 203492 Fusobacteriaceae 0.00 1 0 G 848 Fusobacterium 0.00 1 1 S 2764326 Fusobacterium hominis 0.00 1 0 G 180162 Cetobacterium 0.00 1 1 S 188913 Cetobacterium somerae 0.00 2 0 F 1129771 Leptotrichiaceae 0.00 1 1 G 32067 Leptotrichia 0.00 1 0 G 32068 Sebaldella 0.00 1 0 S 826 Sebaldella termitidis 0.00 1 1 S1 526218 Sebaldella termitidis ATCC 33386 0.00 1 0 D 2157 Archaea 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 183963 Halobacteria 0.00 1 0 O 2235 Halobacteriales 0.00 1 0 F 2236 Halobacteriaceae 0.00 1 1 G 2239 Halobacterium