23.03 30311 30311 U 0 unclassified 76.97 101308 0 R 1 root 76.97 101308 2 R1 131567 cellular organisms 76.97 101301 2519 D 2 Bacteria 69.30 91215 34 P 1224 Pseudomonadota 39.41 51872 11 C 28211 Alphaproteobacteria 39.17 51553 13810 O 766 Rickettsiales 28.64 37698 6 F 942 Anaplasmataceae 28.61 37655 0 F1 952 Wolbachieae 28.61 37655 31441 G 953 Wolbachia 4.19 5517 1159 G1 2640676 unclassified Wolbachia 1.40 1842 1842 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.43 562 562 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.26 346 346 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.12 160 160 S 3077922 Wolbachia endosymbiont (group A) of Ischnus inquisitorius 0.11 142 142 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.10 134 134 S 2742717 Wolbachia endosymbiont of Wiebesia pumilae 0.07 98 98 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.07 96 96 S 2954037 Wolbachia endosymbiont (group B) of Pammene fasciana 0.07 92 92 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.07 92 92 S 3066179 Wolbachia endosymbiont (group B) of Idaea biselata 0.06 79 79 S 2954056 Wolbachia endosymbiont (group A) of Sicus ferrugineus 0.06 75 75 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.05 70 70 S 2954012 Wolbachia endosymbiont (group B) of Eucosma cana 0.05 66 66 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.04 51 51 S 2953988 Wolbachia endosymbiont (group A) of Bombylius major 0.04 48 48 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.04 47 47 S 3066148 Wolbachia endosymbiont (group A) of Myopa testacea 0.04 47 47 S 2954051 Wolbachia endosymbiont (group B) of Protocalliphora azurea 0.03 42 42 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.03 39 39 S 3066154 Wolbachia endosymbiont (group A) of Pipizella viduata 0.02 30 30 S 3066174 Wolbachia endosymbiont (group A) of Ennomos erosarius 0.02 30 30 S 2954031 Wolbachia endosymbiont (group A) of Merzomyia westermanni 0.02 25 25 S 3066184 Wolbachia endosymbiont (group B) of Xanthorhoe designata 0.01 19 19 S 2916816 Wolbachia endosymbiont of Howardula sp. 0.01 19 19 S 2954021 Wolbachia endosymbiont (group B) of Ischnura elegans 0.01 16 16 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.01 13 13 S 2953975 Wolbachia endosymbiont (group A) of Andrena dorsata 0.01 11 11 S 163164 Wolbachia endosymbiont of Drosophila melanogaster 0.01 11 11 S 3066175 Wolbachia endosymbiont (group B) of Ennomos erosarius 0.01 10 10 S 3066210 Wolbachia endosymbiont (group A) of Ophion ellenae 0.01 9 9 S 3066201 Wolbachia endosymbiont (group A) of Lasioglossum fulvicorne 0.01 8 8 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.00 5 5 S 2954057 Wolbachia endosymbiont (group A) of Sphaerophoria taeniata 0.00 4 4 S 2953978 Wolbachia endosymbiont (group A) of Anomoia purmunda 0.00 3 3 S 3066207 Wolbachia endosymbiont (group A) of Nomada goodeniana 0.00 3 0 S 77038 Wolbachia endosymbiont of Drosophila simulans 0.00 3 3 S1 1236908 Wolbachia endosymbiont of Drosophila simulans wNo 0.00 3 3 S 3066157 Wolbachia endosymbiont (group B) of Villa cingulata 0.00 3 3 S 215173 Wolbachia endosymbiont of Bemisia tabaci 0.00 3 3 S 80850 Wolbachia endosymbiont of Litomosoides sigmodontis 0.00 1 1 S 3066173 Wolbachia endosymbiont (group B) of Elophila nymphaeata 0.00 1 1 S 125593 Wolbachia endosymbiont of Trichogramma pretiosum 0.00 1 1 S 2954063 Wolbachia endosymbiont (group A) of Tiphia femorata 0.00 1 1 S 3066200 Wolbachia endosymbiont (group A) of Gastracanthus pulcherrimus 0.00 1 1 S 1812112 Wolbachia endosymbiont of Dipetalonema caudispina 0.49 641 641 S 955 Wolbachia pipientis 0.04 56 56 S 1845000 Candidatus Wolbachia massiliensis 0.01 16 0 G 2883098 Candidatus Mesenet 0.01 16 0 G1 3066220 unclassified Candidatus Mesenet 0.01 16 16 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.01 11 0 G 467749 Candidatus Neoehrlichia 0.01 11 11 S 89586 Neoehrlichia mikurensis 0.01 8 5 G 33993 Neorickettsia 0.00 2 0 S 33994 Neorickettsia helminthoeca 0.00 2 2 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.00 1 0 S 951 Neorickettsia sennetsu 0.00 1 1 S1 222891 Neorickettsia sennetsu str. Miyayama 0.00 1 1 G 768 Anaplasma 0.00 1 0 G 943 Ehrlichia 0.00 1 1 G1 106178 canis group 0.02 22 2 F 775 Rickettsiaceae 0.02 20 7 F1 33988 Rickettsieae 0.01 8 0 G 69474 Orientia 0.01 8 8 S 784 Orientia tsutsugamushi 0.00 4 0 G 780 Rickettsia 0.00 3 0 G1 114295 unclassified Rickettsia 0.00 3 3 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.00 1 0 G1 114277 spotted fever group 0.00 1 0 S 781 Rickettsia conorii 0.00 1 1 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G 1522201 Candidatus Trichorickettsia 0.00 1 1 S 1346319 Candidatus Trichorickettsia mobilis 0.01 17 0 F 1328881 Candidatus Midichloriaceae 0.01 16 0 G 411566 Candidatus Midichloria 0.01 16 0 S 234827 Candidatus Midichloria mitochondrii 0.01 16 16 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 1 1 G 2716172 Candidatus Bandiella 0.00 6 0 O1 1699067 unclassified Rickettsiales 0.00 6 6 S 2486578 Rickettsiales endosymbiont of Stachyamoeba lipophora 0.12 154 1 O 204441 Rhodospirillales 0.11 142 15 F 433 Acetobacteraceae 0.05 72 0 G 434 Acetobacter 0.05 72 0 G1 151157 Acetobacter subgen. Acetobacter 0.05 72 72 S 435 Acetobacter aceti 0.03 35 0 G 91914 Asaia 0.03 35 0 S 91915 Asaia bogorensis 0.03 35 35 S1 1231624 Asaia bogorensis NBRC 16594 0.01 10 10 G 522 Acidiphilium 0.00 5 3 G 1434011 Komagataeibacter 0.00 2 2 S 28448 Komagataeibacter xylinus 0.00 3 0 G 3027666 Aristophania 0.00 3 3 S 2697033 Aristophania vespae 0.00 1 0 G 320496 Neoasaia 0.00 1 1 S 320497 Neoasaia chiangmaiensis 0.00 1 0 G 125216 Roseomonas 0.00 1 1 S 1750527 Roseomonas fluvialis 0.00 5 0 F 2690195 Elioraeaceae 0.00 5 0 G 457933 Elioraea 0.00 5 5 S 2843330 Elioraea tepida 0.00 3 0 F 2829815 Azospirillaceae 0.00 2 2 G 204447 Skermanella 0.00 1 0 G 191 Azospirillum 0.00 1 0 G1 2630922 unclassified Azospirillum 0.00 1 1 S 652764 Azospirillum sp. TSH100 0.00 1 0 F 41295 Rhodospirillaceae 0.00 1 0 G 111830 Defluviicoccus 0.00 1 1 S 111831 Defluviicoccus vanus 0.00 1 0 F 597359 Kiloniellaceae 0.00 1 0 G 1647175 Aestuariispira 0.00 1 1 S 2775080 Aestuariispira ectoiniformans 0.00 1 0 F 3031144 Dongiaceae 0.00 1 1 G 2705399 Hypericibacter 0.07 95 0 O 356 Hyphomicrobiales 0.03 39 5 F 119045 Methylobacteriaceae 0.02 32 32 G 407 Methylobacterium 0.00 2 1 G 186650 Microvirga 0.00 1 1 S 1882682 Microvirga ossetica 0.02 31 0 F 41294 Nitrobacteraceae 0.02 31 1 G 374 Bradyrhizobium 0.02 30 0 G1 2631580 unclassified Bradyrhizobium 0.02 22 22 S 2590772 Bradyrhizobium sp. I71 0.01 7 7 S 2898442 Bradyrhizobium sp. 62B 0.00 1 1 S 2057741 Bradyrhizobium sp. SK17 0.01 11 0 F 45401 Hyphomicrobiaceae 0.01 8 2 G 81 Hyphomicrobium 0.00 6 0 G1 2619925 unclassified Hyphomicrobium 0.00 6 6 S 2682968 Hyphomicrobium sp. ghe19 0.00 2 2 G 1484898 Methyloceanibacter 0.00 1 0 G 29407 Rhodoplanes 0.00 1 0 G1 2619116 unclassified Rhodoplanes 0.00 1 1 S 674703 Rhodoplanes sp. Z2-YC6860 0.01 10 1 F 82115 Rhizobiaceae 0.01 7 6 F1 227290 Rhizobium/Agrobacterium group 0.00 1 0 G 357 Agrobacterium 0.00 1 1 S 2792015 Agrobacterium leguminum 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 28105 Sinorhizobium 0.00 1 1 S 382 Sinorhizobium meliloti 0.00 1 0 G 323620 Shinella 0.00 1 1 G1 2643062 unclassified Shinella 0.00 2 0 F 335928 Xanthobacteraceae 0.00 2 0 G 99 Ancylobacter 0.00 2 2 S 223390 Ancylobacter polymorphus 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 1 G 245876 Nitratireductor 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 169055 Nordella 0.00 1 0 G1 2623691 unclassified Nordella 0.00 1 1 S 2712222 Nordella sp. HKS 07 0.03 33 1 O 204455 Rhodobacterales 0.02 31 5 F 31989 Paracoccaceae 0.02 24 21 G 265 Paracoccus 0.00 2 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.00 1 0 S 34003 Paracoccus aminophilus 0.00 1 1 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 G 1653176 Cereibacter 0.00 1 0 G 2831955 Pikeienuella 0.00 1 1 S 2748098 Pikeienuella piscinae 0.00 1 0 F 2854170 Roseobacteraceae 0.00 1 0 G 74030 Roseovarius 0.00 1 0 G1 2614913 unclassified Roseovarius 0.00 1 1 S 2823043 Roseovarius sp. SCSIO 43702 0.01 15 0 O 204457 Sphingomonadales 0.01 12 0 F 41297 Sphingomonadaceae 0.01 12 6 G 13687 Sphingomonas 0.00 3 3 S 1541170 Sphingomonas morindae 0.00 3 0 G1 196159 unclassified Sphingomonas 0.00 3 3 S 3114300 Sphingomonas sp. M1-B02 0.00 3 2 F 335929 Erythrobacteraceae 0.00 1 0 G 2800680 Alteriqipengyuania 0.00 1 1 S 3053610 Alteriqipengyuania flavescens 0.01 8 0 O 204458 Caulobacterales 0.01 8 0 F 76892 Caulobacteraceae 0.00 3 3 G 41275 Brevundimonas 0.00 3 1 G 76890 Asticcacaulis 0.00 2 2 G1 2628350 unclassified Asticcacaulis 0.00 1 0 G 75 Caulobacter 0.00 1 0 G1 2648921 unclassified Caulobacter 0.00 1 1 S 3016000 Caulobacter sp. NIBR1757 0.00 1 0 G 2768684 Terricaulis 0.00 1 1 S 2686094 Terricaulis silvestris 0.00 3 0 O 1921002 Holosporales 0.00 3 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 3 0 G 1521255 Candidatus Paracaedibacter 0.00 3 3 S 91604 Candidatus Paracaedibacter acanthamoebae 29.27 38524 84 C 1236 Gammaproteobacteria 14.62 19247 0 O 72274 Pseudomonadales 14.62 19242 61 F 135621 Pseudomonadaceae 14.55 19151 17405 G 286 Pseudomonas 0.44 585 110 G1 196821 unclassified Pseudomonas 0.10 132 132 S 2931382 Pseudomonas sp. PIA16 0.06 79 79 S 2954092 Pseudomonas sp. FP2335 0.03 35 35 S 2954097 Pseudomonas sp. FP603 0.02 32 32 S 2954080 Pseudomonas sp. FP1762 0.02 22 22 S 2954094 Pseudomonas sp. FP453 0.02 21 21 S 2871095 Pseudomonas sp. DR48 0.01 19 19 S 2895471 Pseudomonas sp. B21-010 0.01 14 14 S 3137451 Pseudomonas sp. G.S.17 0.01 12 12 S 1649877 Pseudomonas sp. CCOS 191 0.01 12 12 S 2705472 Pseudomonas sp. MTM4 0.01 10 10 S 2954088 Pseudomonas sp. FP2262 0.01 10 10 S 2748080 Pseudomonas sp. ABC1 0.01 9 9 S 2954078 Pseudomonas sp. FP1740 0.01 7 7 S 3035289 Pseudomonas sp. NyZ480 0.00 6 6 S 2892442 Pseudomonas sp. CIP-10 0.00 6 6 S 2895472 Pseudomonas sp. B21-012 0.00 6 6 S 2944392 Pseudomonas sp. BYT-5 0.00 6 6 S 1357074 Pseudomonas sp. LS44 0.00 6 6 S 2976884 Pseudomonas sp. FJ2-5-13 0.00 5 5 S 2559074 Pseudomonas sp. S150 0.00 3 3 S 2901380 Pseudomonas sp. NIBR-H-19 0.00 3 3 S 3002903 Pseudomonas sp. BSw22131 0.00 3 3 S 1855380 Pseudomonas sp. Z003-0.4C(8344-21) 0.00 2 2 S 2954101 Pseudomonas sp. FP830 0.00 2 2 S 2083051 Pseudomonas sp. SWI6 0.00 2 2 S 2762896 Pseudomonas sp. MPDS 0.00 2 2 S 2870750 Pseudomonas sp. CYM-20-01 0.00 2 2 S 1500686 Pseudomonas sp. Os17 0.00 1 1 S 1027966 Pseudomonas sp. HR96 0.00 1 1 S 2018067 Pseudomonas sp. FDAARGOS_380 0.00 1 1 S 2954086 Pseudomonas sp. FP2196 0.00 1 1 S 1207075 Pseudomonas sp. UW4 0.00 1 1 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 2883205 Pseudomonas sp. L5B5 0.00 1 1 S 2726989 Pseudomonas sp. gcc21 0.28 363 0 G1 136843 Pseudomonas fluorescens group 0.14 184 1 S 47883 Pseudomonas synxantha 0.14 183 183 S1 96901 Pseudomonas synxantha BG33R 0.06 75 75 S 47878 Pseudomonas azotoformans 0.04 50 50 S 183795 Pseudomonas mediterranea 0.02 26 26 S 200450 Pseudomonas trivialis 0.01 19 19 S 321662 Pseudomonas moraviensis 0.01 7 2 S 294 Pseudomonas fluorescens 0.00 5 5 S1 1038922 Pseudomonas fluorescens Q2-87 0.00 2 2 S 76761 Pseudomonas veronii 0.21 272 3 G1 136845 Pseudomonas putida group 0.11 143 143 S 78327 Pseudomonas mosselii 0.10 126 125 S 303 Pseudomonas putida 0.00 1 1 S1 1196325 Pseudomonas putida DOT-T1E 0.11 142 0 G1 136841 Pseudomonas aeruginosa group 0.11 141 141 S 287 Pseudomonas aeruginosa 0.00 1 1 S 53406 Pseudomonas anguilliseptica 0.06 79 79 S 46677 Pseudomonas agarici 0.06 77 77 S 2738125 Pseudomonas hefeiensis 0.06 76 0 G1 136842 Pseudomonas chlororaphis group 0.06 76 76 S 380021 Pseudomonas protegens 0.03 34 0 G1 136849 Pseudomonas syringae group 0.02 32 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.02 32 0 S 317 Pseudomonas syringae 0.02 20 20 S1 1357285 Pseudomonas syringae CC457 0.01 12 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.01 12 12 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 2 0 G2 251698 Pseudomonas syringae group genomosp. 2 0.00 2 2 S 29438 Pseudomonas savastanoi 0.02 23 23 S 437900 Pseudomonas marincola 0.01 16 16 S 2853159 Pseudomonas pergaminensis 0.01 12 12 S 2599595 Pseudomonas eucalypticola 0.01 10 10 S 2894079 Pseudomonas oryziphila 0.01 9 9 S 930166 Pseudomonas brassicacearum 0.01 9 9 S 2954098 Pseudomonas wuhanensis 0.01 8 8 S 1499686 Pseudomonas saudiphocaensis 0.01 7 7 S 1198456 Pseudomonas guguanensis 0.01 7 7 S 2681983 Pseudomonas bijieensis 0.00 5 5 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 2 2 S 485880 Pseudomonas kurunegalensis 0.00 2 0 G1 62104 environmental samples 0.00 2 2 S 114707 uncultured Pseudomonas sp. 0.00 1 1 S 1306993 Pseudomonas soli 0.00 1 1 S 2995174 Pseudomonas quebecensis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 2842346 Pseudomonas siliginis 0.00 1 1 S 3136738 Pseudomonas helvetica 0.00 1 1 S 244566 Pseudomonas lurida 0.00 1 1 S 2219225 Pseudomonas asiatica 0.00 1 1 S 158627 Pseudomonas graminis 0.01 13 13 G 2901189 Halopseudomonas 0.01 10 0 G 2758906 Entomomonas 0.01 10 0 G1 2785330 unclassified Entomomonas 0.01 10 10 S 2930213 Entomomonas sp. E2T0 0.00 3 0 G 2901164 Stutzerimonas 0.00 3 0 G1 136846 Stutzerimonas stutzeri group 0.00 2 2 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 G 2901261 Denitrificimonas 0.00 1 1 S 521720 Denitrificimonas caeni 0.00 3 0 F 3085096 Ketobacteraceae 0.00 3 0 G 2025617 Ketobacter 0.00 3 3 S 1917421 Ketobacter alkanivorans 0.00 2 0 F 2887365 Marinobacteraceae 0.00 2 0 G 2742 Marinobacter 0.00 2 2 G1 83889 unclassified Marinobacter 13.82 18196 77 O 91347 Enterobacterales 9.82 12927 8677 F 1903411 Yersiniaceae 2.88 3797 3314 G 613 Serratia 0.23 300 300 S 61652 Serratia rubidaea 0.10 138 138 S 138074 Serratia symbiotica 0.02 23 4 S 82996 Serratia plymuthica 0.01 19 19 S1 1006598 Serratia plymuthica RVH1 0.01 11 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.01 11 11 S 2785630 Serratia sp. CMO1 0.01 9 9 S 614 Serratia liquefaciens 0.00 2 0 S 2338073 Serratia inhibens 0.00 2 2 S1 1154756 Serratia inhibens PRI-2C 0.30 397 39 G 629 Yersinia 0.22 290 2 G1 1649845 Yersinia pseudotuberculosis complex 0.22 286 4 S 632 Yersinia pestis 0.13 172 172 S1 748678 Yersinia pestis str. Pestoides B 0.05 65 65 S1 1035377 Yersinia pestis A1122 0.02 22 22 S1 1345705 Yersinia pestis 1522 0.01 9 9 S1 649716 Yersinia pestis Pestoides G 0.00 6 6 S1 360102 Yersinia pestis Antiqua 0.00 6 6 S1 1345707 Yersinia pestis 3770 0.00 2 2 S1 1345701 Yersinia pestis 790 0.00 2 2 S 633 Yersinia pseudotuberculosis 0.03 34 20 S 630 Yersinia enterocolitica 0.01 14 0 S1 150053 Yersinia enterocolitica subsp. palearctica 0.01 14 14 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.01 17 0 S 29483 Yersinia aldovae 0.01 17 17 S1 1453495 Yersinia aldovae 670-83 0.01 9 9 S 935293 Yersinia entomophaga 0.01 8 8 S 29486 Yersinia ruckeri 0.01 17 0 G 34037 Rahnella 0.01 15 15 S 1510570 Rahnella victoriana 0.00 2 2 S 1805933 Rahnella sikkimica 0.01 16 0 G 1745211 Chania 0.01 16 0 S 1639108 Chania multitudinisentens 0.01 16 16 S1 1441930 Chania multitudinisentens RB-25 0.01 12 12 G 1927833 Candidatus Fukatsuia 0.01 10 0 G 929812 Gibbsiella 0.01 10 10 S 929813 Gibbsiella quercinecans 0.00 1 0 G 1964366 Nissabacter 0.00 1 0 G1 2636213 unclassified Nissabacter 0.00 1 1 S 2126321 Nissabacter sp. SGAir0207 3.75 4932 557 F 543 Enterobacteriaceae 2.18 2869 3 G 561 Escherichia 2.17 2862 2552 S 562 Escherichia coli 0.22 289 289 S1 316435 Escherichia coli Nissle 1917 0.00 6 6 S1 244320 Escherichia coli O55:H7 0.00 5 1 S1 83334 Escherichia coli O157:H7 0.00 4 4 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 2 0 S1 1038927 Escherichia coli O104:H4 0.00 2 2 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 2 2 S1 376725 Escherichia coli O103:H2 0.00 2 2 S1 655817 Escherichia coli ABU 83972 0.00 1 0 S1 83333 Escherichia coli K-12 0.00 1 1 S2 879462 Escherichia coli str. K-12 substr. MG1655star 0.00 1 1 S1 405955 Escherichia coli APEC O1 0.00 1 1 S1 1446600 Escherichia coli O15:H18 0.00 1 1 S1 331112 Escherichia coli HS 0.00 2 2 S 564 Escherichia fergusonii 0.00 2 2 S 208962 Escherichia albertii 0.62 820 1 G 544 Citrobacter 0.62 810 810 S 2971264 Citrobacter enshiensis 0.01 9 0 G1 1344959 Citrobacter freundii complex 0.00 5 5 S 1639133 Citrobacter portucalensis 0.00 3 3 S 546 Citrobacter freundii 0.00 1 1 S 67828 Citrobacter gillenii 0.24 320 0 G 547 Enterobacter 0.24 319 1 G1 354276 Enterobacter cloacae complex 0.22 288 288 S 299767 Enterobacter ludwigii 0.02 23 23 S 158836 Enterobacter hormaechei 0.00 3 3 S 208224 Enterobacter kobei 0.00 2 2 S 1812935 Enterobacter roggenkampii 0.00 1 1 S 550 Enterobacter cloacae 0.00 1 1 S 61645 Enterobacter asburiae 0.00 1 1 S 881260 Enterobacter bugandensis 0.12 155 3 G 590 Salmonella 0.12 152 24 S 28901 Salmonella enterica 0.10 128 7 S1 59201 Salmonella enterica subsp. enterica 0.03 44 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.02 29 29 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 15 15 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 19 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.01 16 16 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 2 2 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.01 13 13 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 12 12 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.01 12 12 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 5 3 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 2 2 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 5 5 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 3 3 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 2 2 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 2 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 2 2 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 2 2 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 486993 Salmonella enterica subsp. enterica serovar Eastbourne 0.00 1 1 S2 286783 Salmonella enterica subsp. enterica serovar Indiana 0.11 150 0 F1 2890311 Klebsiella/Raoultella group 0.11 148 1 G 570 Klebsiella 0.09 116 57 S 573 Klebsiella pneumoniae 0.04 59 58 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.01 10 7 S 1463165 Klebsiella quasipneumoniae 0.00 3 3 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 9 9 S 548 Klebsiella aerogenes 0.00 6 6 S 1134687 Klebsiella michiganensis 0.00 3 3 S 244366 Klebsiella variicola 0.00 2 0 G1 2608929 unclassified Klebsiella 0.00 1 1 S 2851540 Klebsiella sp. PL-2018 0.00 1 1 S 2829835 Klebsiella sp. P1954 0.00 1 1 S 2153354 Klebsiella huaxiensis 0.00 2 0 G 160674 Raoultella 0.00 2 2 S 577 Raoultella terrigena 0.01 15 1 F1 36866 unclassified Enterobacteriaceae 0.01 12 12 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 2 2 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 13 0 G 1330547 Kosakonia 0.01 13 13 S 208223 Kosakonia cowanii 0.01 9 0 G 620 Shigella 0.00 6 6 S 623 Shigella flexneri 0.00 3 3 S 621 Shigella boydii 0.00 5 0 G 2303321 Superficieibacter 0.00 5 0 G1 2645744 unclassified Superficieibacter 0.00 5 5 S 3031919 Superficieibacter sp. HKU1 0.00 3 0 G 409304 Candidatus Ishikawella 0.00 3 0 S 168169 Candidatus Ishikawella capsulata 0.00 3 3 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 3 0 G 451512 Mangrovibacter 0.00 3 3 S 1691903 Mangrovibacter phragmitis 0.00 2 0 G 2815296 Jejubacter 0.00 2 2 S 2579935 Jejubacter calystegiae 0.00 2 2 G 158483 Cedecea 0.00 2 0 G 1330545 Lelliottia 0.00 2 2 S 61646 Lelliottia amnigena 0.00 2 0 F1 191675 Enterobacteriaceae incertae sedis 0.00 2 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 1 0 F3 84564 ant endosymbionts 0.00 1 0 G 203804 Candidatus Blochmanniella 0.00 1 1 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 0 G 579 Kluyvera 0.00 1 1 S 61648 Kluyvera intermedia 0.00 1 0 G 1330546 Pluralibacter 0.00 1 0 S 1334193 [Enterobacter] lignolyticus 0.00 1 1 S1 701347 [Enterobacter] lignolyticus SCF1 0.00 1 0 G 1048757 Candidatus Moranella 0.00 1 1 S 1048758 Candidatus Moranella endobia 0.00 1 0 G 158851 Trabulsiella 0.00 1 1 S 379893 Trabulsiella odontotermitis 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.15 195 17 F 1903414 Morganellaceae 0.10 126 12 G 586 Providencia 0.08 106 0 S 516075 Providencia sneebia 0.08 106 106 S1 1141660 Providencia sneebia DSM 19967 0.00 6 6 S 158850 Providencia rustigianii 0.00 1 1 S 588 Providencia stuartii 0.00 1 1 S 126385 Providencia alcalifaciens 0.03 46 0 G 581 Morganella 0.03 46 46 S 582 Morganella morganii 0.00 4 0 G 583 Proteus 0.00 4 4 S 584 Proteus mirabilis 0.00 1 0 G 626 Xenorhabdus 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 1 1 G 29487 Photorhabdus 0.03 40 0 F 2812006 Bruguierivoracaceae 0.03 40 0 G 84565 Sodalis 0.03 35 35 S 2697027 Sodalis ligni 0.00 4 0 S 1486991 Candidatus Sodalis pierantonius 0.00 4 4 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.01 18 1 F 1903409 Erwiniaceae 0.01 9 0 G 32199 Buchnera 0.01 9 6 S 9 Buchnera aphidicola 0.00 2 2 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 1 1 S1 2911030 Buchnera aphidicola (Sipha maydis) 0.00 6 0 G 53335 Pantoea 0.00 5 0 G1 1654067 Pantoea agglomerans group 0.00 5 5 S 549 Pantoea agglomerans 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.00 2 0 G 551 Erwinia 0.00 1 1 S 1922217 Candidatus Erwinia haradaeae 0.00 1 0 G1 2622719 unclassified Erwinia 0.00 1 1 S 215689 Erwinia sp. Ejp617 0.00 6 0 F 1903410 Pectobacteriaceae 0.00 5 5 G 204037 Dickeya 0.00 1 0 G 122277 Pectobacterium 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.00 1 0 F 1903412 Hafniaceae 0.00 1 0 G 635 Edwardsiella 0.00 1 1 S 93378 Edwardsiella hoshinae 0.46 608 0 O 135623 Vibrionales 0.46 608 13 F 641 Vibrionaceae 0.42 548 468 G 662 Vibrio 0.02 22 4 G1 717610 Vibrio harveyi group 0.01 10 0 G2 2315253 Vibrio diabolicus subgroup 0.01 10 10 S 50719 Vibrio diabolicus 0.00 6 6 S 669 Vibrio harveyi 0.00 2 2 S 670 Vibrio parahaemolyticus 0.01 16 16 S 666 Vibrio cholerae 0.01 13 2 G1 2614977 unclassified Vibrio 0.00 3 3 S 2819100 Vibrio sp. SCSIO 43140 0.00 2 2 S 3042300 Vibrio sp. YMD68 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2751179 Vibrio sp. B1REV9 0.00 1 1 S 2751177 Vibrio sp. B1FIG11 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2163016 Vibrio sp. dhg 0.00 6 6 S 1824638 Vibrio japonicus 0.00 3 3 S 2662262 Vibrio algicola 0.00 3 3 S 676 Vibrio fluvialis 0.00 3 0 S 52443 Vibrio tapetis 0.00 3 3 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 2 2 S 687 Vibrio gazogenes 0.00 2 2 S 1381081 Vibrio panuliri 0.00 2 2 S 28173 Vibrio nigripulchritudo 0.00 2 2 S 104609 Vibrio penaeicida 0.00 1 1 S 672 Vibrio vulnificus 0.00 1 1 S 1481923 Vibrio astriarenae 0.00 1 1 S 446374 Vibrio artabrorum 0.00 1 0 S 435912 Vibrio porteresiae 0.00 1 1 S1 1123496 Vibrio porteresiae DSM 19223 0.00 1 1 S 675 Vibrio cincinnatiensis 0.00 1 1 S 28172 Vibrio metschnikovii 0.03 40 38 G 51366 Salinivibrio 0.00 2 2 S 334715 Salinivibrio proteolyticus 0.01 7 0 G 657 Photobacterium 0.00 4 2 S 38293 Photobacterium damselae 0.00 2 2 S1 38294 Photobacterium damselae subsp. piscicida 0.00 3 1 S 553611 Photobacterium leiognathi 0.00 2 2 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.11 141 0 O 135619 Oceanospirillales 0.10 135 33 F 28256 Halomonadaceae 0.07 88 0 G 2745 Halomonas 0.07 86 81 G1 2609666 unclassified Halomonas 0.00 2 2 S 3084920 Halomonas sp. Bachu 37 0.00 2 2 S 2855441 Halomonas sp. 18071143 0.00 1 1 S 2773308 Halomonas sp. YLGW01 0.00 2 2 S 29570 Halomonas meridiana 0.01 11 0 G 404432 Salinicola 0.01 11 11 S 1949083 Salinicola endophyticus 0.00 2 0 F1 114403 Zymobacter group 0.00 2 0 G 235572 Candidatus Portiera 0.00 2 2 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 3137766 Vreelandella 0.00 1 1 S 29571 Vreelandella subglaciescola 0.00 6 0 F 135620 Oceanospirillaceae 0.00 3 1 G 28253 Marinomonas 0.00 2 2 S 2773454 Marinomonas algicola 0.00 1 1 G 187492 Thalassolituus 0.00 1 0 G 459520 Neptuniibacter 0.00 1 1 S 651666 Neptuniibacter halophilus 0.00 1 1 G 515417 Amphritea 0.05 70 1 O 135614 Lysobacterales 0.05 60 0 F 32033 Lysobacteraceae 0.04 50 0 G 338 Xanthomonas 0.04 50 50 S 29447 Xanthomonas albilineans 0.01 7 4 G 40323 Stenotrophomonas 0.00 3 3 S 216778 Stenotrophomonas rhizophila 0.00 2 1 G 83618 Pseudoxanthomonas 0.00 1 1 S 266062 Pseudoxanthomonas daejeonensis 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.01 9 2 F 1775411 Rhodanobacteraceae 0.00 5 3 G 75309 Rhodanobacter 0.00 1 1 S 582702 Rhodanobacter glycinis 0.00 1 1 G1 2621553 unclassified Rhodanobacter 0.00 1 0 G 242605 Luteibacter 0.00 1 1 S 2911539 Luteibacter aegosomatissinici 0.00 1 0 G 1453544 Tahibacter 0.00 1 1 S 2976241 Tahibacter amnicola 0.04 51 2 O 135622 Alteromonadales 0.03 35 0 F 267888 Pseudoalteromonadaceae 0.03 35 25 G 53246 Pseudoalteromonas 0.01 7 7 S 2774154 Pseudoalteromonas ostreae 0.00 2 2 S 2518973 Pseudoalteromonas rhizosphaerae 0.00 1 0 S 206042 Pseudoalteromonas mariniglutinosa 0.00 1 1 S1 1315277 Pseudoalteromonas mariniglutinosa NCIMB 1770 0.01 9 0 F 267890 Shewanellaceae 0.01 9 5 G 22 Shewanella 0.00 4 4 S 62322 Shewanella baltica 0.00 3 1 F 72275 Alteromonadaceae 0.00 2 0 F1 2903219 Alteromonas/Salinimonas group 0.00 2 0 G 226 Alteromonas 0.00 2 0 G1 2614992 unclassified Alteromonas 0.00 2 2 S 2267264 Alteromonas sp. RKMC-009 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 135575 Idiomarina 0.00 1 1 S 135577 Idiomarina loihiensis 0.00 1 0 F 267894 Psychromonadaceae 0.00 1 0 G 67572 Psychromonas 0.00 1 0 S 357794 Psychromonas ingrahamii 0.00 1 1 S1 357804 Psychromonas ingrahamii 37 0.03 38 0 O 2887326 Moraxellales 0.03 38 0 F 468 Moraxellaceae 0.01 18 10 G 469 Acinetobacter 0.00 3 3 S 1871111 Acinetobacter defluvii 0.00 2 1 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2714110 Acinetobacter sp. Marseille-Q1620 0.00 1 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 1 1 S 470 Acinetobacter baumannii 0.00 1 1 S 2662362 Acinetobacter wanghuae 0.00 1 1 S 202956 Acinetobacter towneri 0.01 14 2 G 497 Psychrobacter 0.01 12 4 G1 196806 unclassified Psychrobacter 0.00 4 4 S 1415574 Psychrobacter sp. LV10R520-6 0.00 4 4 S 3064892 Psychrobacter sp. van23A 0.00 6 4 G 475 Moraxella 0.00 2 2 S 2904120 Moraxella nasibovis 0.02 30 0 O 135625 Pasteurellales 0.02 30 0 F 712 Pasteurellaceae 0.01 16 0 G 724 Haemophilus 0.01 16 16 S 729 Haemophilus parainfluenzae 0.00 4 0 G 75984 Mannheimia 0.00 4 4 S 85402 Mannheimia granulomatis 0.00 3 0 G 745 Pasteurella 0.00 3 3 S 747 Pasteurella multocida 0.00 3 0 G 1960084 Rodentibacter 0.00 3 3 S 1796644 Rodentibacter caecimuris 0.00 2 1 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 1 0 G 713 Actinobacillus 0.00 1 0 S 718 Actinobacillus equuli 0.00 1 1 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.02 22 0 O 135624 Aeromonadales 0.02 21 0 F 84642 Aeromonadaceae 0.01 15 0 G 225143 Oceanisphaera 0.01 15 15 S 1903694 Oceanisphaera avium 0.00 6 1 G 642 Aeromonas 0.00 4 4 S 654 Aeromonas veronii 0.00 1 0 G1 257493 unclassified Aeromonas 0.00 1 1 S 2920537 Aeromonas sp. 19NY04SH05-1 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.01 15 0 O 135613 Chromatiales 0.01 13 2 F 1046 Chromatiaceae 0.00 4 0 G 2828366 Caldichromatium 0.00 4 4 S 2699430 Caldichromatium japonicum 0.00 2 2 G 61593 Thiorhodovibrio 0.00 2 0 G 2796146 Candidatus Nitrosacidococcus 0.00 2 2 S 553981 Candidatus Nitrosacidococcus tergens 0.00 1 1 G 67575 Rheinheimera 0.00 1 1 G 85072 Allochromatium 0.00 1 0 G 156885 Thioflavicoccus 0.00 1 0 S 80679 Thioflavicoccus mobilis 0.00 1 1 S1 765912 Thioflavicoccus mobilis 8321 0.00 1 0 F 72276 Ectothiorhodospiraceae 0.00 1 1 G 1335745 Spiribacter 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 1913444 Candidatus Thiodiazotropha 0.00 1 1 S 3065865 Candidatus Thiodiazotropha sp. CDECU1 0.01 9 0 O 135618 Methylococcales 0.01 9 1 F 403 Methylococcaceae 0.00 3 0 G 39773 Methylomicrobium 0.00 3 0 S 39775 Methylomicrobium album 0.00 3 3 S1 686340 Methylomicrobium album BG8 0.00 2 0 G 3135206 Candidatus Methylocalor 0.00 2 2 S 3108543 Candidatus Methylocalor cossyra 0.00 1 0 G 416 Methylomonas 0.00 1 1 S 1538553 Methylomonas denitrificans 0.00 1 0 G 73778 Methylocaldum 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.00 3 0 O 1706369 Cellvibrionales 0.00 3 3 F 1706372 Halieaceae 0.00 3 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 2 0 C2 32036 sulfur-oxidizing symbionts 0.00 2 0 G 2686004 Candidatus Vondammii 0.00 2 0 G1 2687300 unclassified Candidatus Vondammii 0.00 2 2 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 1 0 G 198346 Candidatus Palibaumannia 0.00 1 1 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 2 0 O 1934945 Immundisolibacterales 0.00 2 0 F 1934946 Immundisolibacteraceae 0.00 2 0 G 1934947 Immundisolibacter 0.00 2 2 S 1810504 Immundisolibacter cernigliae 0.00 2 0 O 3060226 Steroidobacterales 0.00 2 0 F 2689614 Steroidobacteraceae 0.00 2 0 G 469322 Steroidobacter 0.00 2 2 S 465721 Steroidobacter denitrificans 0.00 1 0 O 72273 Thiotrichales 0.00 1 0 F 135617 Thiotrichaceae 0.00 1 0 G 1030 Thiothrix 0.00 1 1 S 525917 Thiothrix lacustris 0.00 1 0 O 1775403 Nevskiales 0.00 1 0 F 568386 Nevskiaceae 0.00 1 0 G 2893022 Flagellatimonas 0.00 1 1 S 2806210 Flagellatimonas centrodinii 0.00 1 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 0 S 446 Legionella pneumophila 0.00 1 1 S1 91891 Legionella pneumophila subsp. pneumophila 0.60 785 11 C 28216 Betaproteobacteria 0.49 647 5 O 80840 Burkholderiales 0.41 541 3 F 119060 Burkholderiaceae 0.20 268 260 G 48736 Ralstonia 0.00 3 3 S 105219 Ralstonia mannitolilytica 0.00 3 0 G1 3116862 Ralstonia solanacearum species complex 0.00 2 2 S 305 Ralstonia solanacearum 0.00 1 1 S 1310165 Ralstonia pseudosolanacearum 0.00 2 0 G1 209769 unclassified Ralstonia 0.00 1 1 S 2880989 Ralstonia sp. RS647 0.00 1 1 S 2880990 Ralstonia sp. RS650 0.19 254 31 G 106589 Cupriavidus 0.16 210 210 S 82633 Cupriavidus pauculus 0.01 12 12 S 164546 Cupriavidus taiwanensis 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.01 7 1 G 32008 Burkholderia 0.00 4 0 G1 87882 Burkholderia cepacia complex 0.00 4 4 S 152500 Burkholderia dolosa 0.00 2 0 G1 111527 pseudomallei group 0.00 1 1 S 28450 Burkholderia pseudomallei 0.00 1 0 S 57975 Burkholderia thailandensis 0.00 1 1 S1 1249664 Burkholderia thailandensis 34 0.01 7 0 G 2038280 Robbsia 0.00 5 0 G1 2636574 unclassified Robbsia 0.00 5 5 S 3149231 Robbsia sp. KACC 23696 0.00 2 2 S 28092 Robbsia andropogonis 0.00 1 0 G 47670 Lautropia 0.00 1 1 S 47671 Lautropia mirabilis 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 1 S 2604047 Paraburkholderia dioscoreae 0.03 34 1 F 80864 Comamonadaceae 0.02 20 0 G 283 Comamonas 0.01 12 0 S 32013 Comamonas terrigena 0.01 12 12 S1 1219032 Comamonas terrigena NBRC 13299 0.01 7 7 S 225991 Comamonas aquatica 0.00 1 1 S 2743470 Comamonas antarctica 0.01 7 0 G 1436289 Candidatus Symbiobacter 0.01 7 0 S 1436290 Candidatus Symbiobacter mobilis 0.01 7 7 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 2 0 G 28065 Rhodoferax 0.00 2 0 G1 2627954 unclassified Rhodoferax 0.00 2 2 S 2741720 Rhodoferax sp. BAB1 0.00 1 0 G 34072 Variovorax 0.00 1 0 G1 663243 unclassified Variovorax 0.00 1 1 S 434008 Variovorax sp. PBS-H4 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 1 S 2716225 Hydrogenophaga crocea 0.00 1 1 G 80865 Delftia 0.00 1 0 G 174951 Ramlibacter 0.00 1 1 S 94132 Ramlibacter tataouinensis 0.02 30 0 F 506 Alcaligenaceae 0.02 23 23 G 507 Alcaligenes 0.00 4 0 G 517 Bordetella 0.00 4 4 S 123899 Bordetella trematum 0.00 2 0 G 1472344 Basilea 0.00 2 0 S 1472345 Basilea psittacipulmonis 0.00 2 2 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 1 0 G 1100891 Paenalcaligenes 0.00 1 1 S 2980099 Paenalcaligenes faecalis 0.01 14 0 F 2975441 Sphaerotilaceae 0.00 6 0 G 196013 Caldimonas 0.00 6 6 S 376175 Schlegelella aquatica 0.00 5 1 G 316612 Methylibium 0.00 4 0 S 105560 Methylibium petroleiphilum 0.00 4 4 S1 420662 Methylibium petroleiphilum PM1 0.00 3 0 G 93681 Roseateles 0.00 3 0 G1 2626991 unclassified Roseateles 0.00 3 3 S 2877940 Roseateles sp. XES5 0.01 10 0 O1 224471 Burkholderiales genera incertae sedis 0.01 10 0 G 114248 Tepidimonas 0.01 10 10 S 307486 Tepidimonas taiwanensis 0.01 7 0 F 75682 Oxalobacteraceae 0.00 4 2 F1 2895353 Telluria group 0.00 2 2 G 149698 Massilia 0.00 2 0 G 846 Oxalobacter 0.00 2 2 S 933080 Oxalobacter vibrioformis 0.00 1 1 G 963 Herbaspirillum 0.00 6 0 F 995019 Sutterellaceae 0.00 4 0 G 1918598 Turicimonas 0.00 4 4 S 1796652 Turicimonas muris 0.00 2 0 G 40544 Sutterella 0.00 2 2 S 2494234 Sutterella megalosphaeroides 0.08 109 7 O 32003 Nitrosomonadales 0.04 48 0 F 2008793 Sterolibacteriaceae 0.04 47 0 G 378210 Methyloversatilis 0.04 47 0 G1 2639971 unclassified Methyloversatilis 0.04 47 47 S 1842540 Methyloversatilis sp. RAC08 0.00 1 0 G 157591 Sterolibacterium 0.00 1 1 S 157592 Sterolibacterium denitrificans 0.01 19 0 F 2008790 Thiobacillaceae 0.01 10 0 G 1938335 Sulfuritortus 0.01 10 10 S 1914471 Sulfuritortus calidifontis 0.01 9 2 G 919 Thiobacillus 0.01 7 0 G1 2646513 unclassified Thiobacillus 0.00 4 4 S 3110231 Thiobacillus sp. SCUT-2 0.00 3 3 S 924 Thiobacillus sp. 0.01 12 11 F 32011 Methylophilaceae 0.00 1 0 G 2872156 Methyloradius 0.00 1 1 S 2778876 Methyloradius palustris 0.01 9 2 F 90627 Gallionellaceae 0.00 5 5 G 453161 Candidatus Nitrotoga 0.00 1 0 G 1443590 Ferriphaselus 0.00 1 1 S 1188319 Ferriphaselus amnicola 0.00 1 0 G 2249462 Ferrigenium 0.00 1 1 S 1682490 Ferrigenium kumadai 0.01 7 0 F 2772226 Sulfuricellaceae 0.00 4 0 G 935200 Sulfuricella 0.00 4 0 S 649841 Sulfuricella denitrificans 0.00 4 4 S1 1163617 Sulfuricella denitrificans skB26 0.00 3 3 G 1778653 Sulfuriferula 0.00 4 0 F 206379 Nitrosomonadaceae 0.00 4 4 G 914 Nitrosomonas 0.00 3 0 F 2803844 Usitatibacteraceae 0.00 3 3 G 2803845 Usitatibacter 0.01 13 0 O 206351 Neisseriales 0.01 11 3 F 481 Neisseriaceae 0.00 6 1 G 299568 Uruburuella 0.00 5 5 S 252130 Uruburuella suis 0.00 2 1 G 482 Neisseria 0.00 1 1 S 28449 Neisseria subflava 0.00 2 0 F 1499392 Chromobacteriaceae 0.00 2 0 G 568394 Pseudogulbenkiania 0.00 2 0 G1 2642558 unclassified Pseudogulbenkiania 0.00 2 2 S 748280 Pseudogulbenkiania sp. NH8B 0.00 5 0 O 206389 Rhodocyclales 0.00 3 0 F 2008795 Azonexaceae 0.00 2 0 G 73029 Dechloromonas 0.00 2 0 G1 2633351 unclassified Dechloromonas 0.00 2 2 S 447588 Dechloromonas sp. A34 0.00 1 0 G 146936 Azonexus 0.00 1 1 S 418702 Azonexus hydrophilus 0.00 2 0 F 75787 Rhodocyclaceae 0.00 1 1 G 146937 Azospira 0.00 1 0 G 1911577 Oryzomicrobium 0.00 1 1 S 1735038 Oryzomicrobium terrae 4.10 5395 6 D1 1783272 Terrabacteria group 3.71 4889 45 P 1239 Bacillota 3.29 4331 85 C 186801 Clostridia 1.64 2161 36 O 186802 Eubacteriales 0.89 1175 32 F 216572 Oscillospiraceae 0.33 439 20 G 1263 Ruminococcus 0.18 234 234 G1 2608920 unclassified Ruminococcus 0.10 138 138 S 1161942 Ruminococcus champanellensis 0.02 25 25 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.01 19 19 S 2564099 Ruminococcus bovis 0.00 2 2 S 438033 Ruminococcus gauvreauii 0.00 1 0 S 1264 Ruminococcus albus 0.00 1 1 S1 697329 Ruminococcus albus 7 = DSM 20455 0.26 347 295 G 216851 Faecalibacterium 0.04 52 52 S 853 Faecalibacterium prausnitzii 0.08 111 0 G 2842531 Solibaculum 0.08 111 111 S 2780922 Solibaculum mannosilyticum 0.05 67 34 G 292632 Subdoligranulum 0.02 27 27 S 214851 Subdoligranulum variabile 0.00 6 0 G1 512297 environmental samples 0.00 6 6 S 512298 uncultured Subdoligranulum sp. 0.03 37 0 G 2172004 Lawsonibacter 0.03 37 37 S 2108523 Lawsonibacter asaccharolyticus 0.03 35 0 G 2304687 Petroclostridium 0.03 35 0 G1 2619260 unclassified Petroclostridium 0.03 35 35 S 3045146 Petroclostridium sp. X23 0.02 21 0 G 459786 Oscillibacter 0.02 21 21 S 2763056 Oscillibacter hominis 0.01 19 11 G 2892396 Vescimonas 0.00 6 6 S 2714353 Vescimonas fastidiosa 0.00 2 2 S 2714355 Vescimonas coprocola 0.01 17 0 G 2038676 Paludihabitans 0.01 17 0 G1 2644543 unclassified Paludihabitans 0.01 17 17 S 3070656 Paludicola sp. MB14-C6 0.01 12 0 G 244127 Anaerotruncus 0.01 12 12 S 169435 Anaerotruncus colihominis 0.01 11 0 G 2892397 Pusillibacter 0.01 11 11 S 2714358 Pusillibacter faecalis 0.01 10 2 G 35829 Acetivibrio 0.00 3 0 S 288965 Acetivibrio clariflavus 0.00 3 3 S1 720554 Acetivibrio clariflavus DSM 19732 0.00 3 3 S 1677857 Acetivibrio saccincola 0.00 2 2 S 1515 Acetivibrio thermocellus 0.01 9 0 G 946234 Flavonifractor 0.01 9 9 S 292800 Flavonifractor plautii 0.00 4 1 G 2834348 Caproicibacterium 0.00 1 1 S 2666138 Caproicibacterium lactatifermentans 0.00 1 0 G1 2834349 unclassified Caproicibacterium 0.00 1 1 S 2994078 Caproicibacterium sp. BJN0003 0.00 1 1 S 3030016 Caproicibacterium argilliputei 0.00 1 0 G 1905344 Ruthenibacterium 0.00 1 1 S 1550024 Ruthenibacterium lactatiformans 0.00 1 0 G 3048127 Thermocaproicibacter 0.00 1 1 S 2966552 Thermocaproicibacter melissae 0.00 1 0 G 1508657 Ruminiclostridium 0.00 1 0 S 29362 Ruminiclostridium papyrosolvens 0.00 1 1 S1 588581 Ruminiclostridium papyrosolvens DSM 2782 0.00 1 0 G 253238 Ethanoligenens 0.00 1 1 S 253239 Ethanoligenens harbinense 0.56 737 26 F 31979 Clostridiaceae 0.45 591 125 G 1485 Clostridium 0.13 175 173 S 1502 Clostridium perfringens 0.00 2 2 S1 451751 Clostridium perfringens B 0.06 77 77 S 1529 Clostridium cadaveris 0.04 53 53 S 1216932 Clostridium bornimense 0.02 28 28 S 1504 Clostridium septicum 0.02 27 24 S 1520 Clostridium beijerinckii 0.00 3 3 S1 1428454 Clostridium beijerinckii NRRL B-598 0.02 22 0 S 238834 Clostridium estertheticum 0.02 22 22 S1 1552 Clostridium estertheticum subsp. estertheticum 0.02 20 20 S 46867 Clostridium chauvoei 0.01 19 18 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.01 17 0 G1 2614128 unclassified Clostridium 0.01 7 7 S 2930219 Clostridium sp. BJN0001 0.00 3 3 S 2681265 Clostridium sp. 16K-1-R1 0.00 2 2 S 97138 Clostridium sp. MD294 0.00 2 2 S 2507159 Clostridium sp. JN-9 0.00 1 1 S 3070681 Clostridium sp. OS1-26 0.00 1 1 S 3064705 Clostridium sp. JS66 0.00 1 1 S 1042156 Clostridium sp. SY8519 0.01 8 8 S 94869 Clostridium gasigenes 0.01 8 8 S 84032 Clostridium thermosuccinogenes 0.00 4 4 S 36845 Clostridium intestinale 0.00 2 2 S 182773 Clostridium isatidis 0.00 2 2 S 1716543 Clostridium thermarum 0.00 2 2 S 29341 Clostridium argentinense 0.00 1 1 S 2320868 Clostridium manihotivorum 0.00 1 1 S 1491 Clostridium botulinum 0.07 95 0 G 1266 Sarcina 0.07 95 0 G1 2619470 unclassified Sarcina 0.07 95 95 S 2726954 Sarcina sp. JB2 0.01 15 0 G 44258 Caloramator 0.01 15 0 G1 2629145 unclassified Caloramator 0.01 15 15 S 2576307 Caloramator sp. E03 0.01 10 0 G 49082 Candidatus Arthromitus 0.01 10 9 G1 2638829 unclassified Candidatus Arthromitus 0.00 1 1 S 1041504 Candidatus Arthromitus sp. SFB-rat-Yit 0.08 99 0 O1 538999 Eubacteriales incertae sedis 0.07 90 0 G 1918454 Flintibacter 0.07 90 0 G1 2610894 unclassified Flintibacter 0.07 90 90 S 2610895 Flintibacter sp. KGMB00164 0.00 3 0 G 415014 Proteiniborus 0.00 3 0 G1 2622907 unclassified Proteiniborus 0.00 3 3 S 3050072 Proteiniborus sp. MB09-C3 0.00 3 0 G 1686313 Fenollaria 0.00 3 3 S 938288 Fenollaria massiliensis 0.00 1 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 1 0 G 2886866 Sinanaerobacter 0.00 1 0 G1 2886867 unclassified Sinanaerobacter 0.00 1 1 S 3111540 Sinanaerobacter sp. ZZT-01 0.00 1 0 G 1392389 Intestinimonas 0.00 1 1 S 1297617 Intestinimonas butyriciproducens 0.00 1 0 G 2717089 Massilistercora 0.00 1 1 S 2086584 Massilistercora timonensis 0.03 46 7 F 3085642 Butyricicoccaceae 0.03 36 0 G 1928820 Intestinibacillus 0.03 36 0 G1 2635293 unclassified Intestinibacillus 0.03 36 36 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 3 0 G 2048137 Agathobaculum 0.00 3 0 G1 2620324 unclassified Agathobaculum 0.00 3 3 S 3079302 Agathobaculum sp. NTUH-O15-33 0.02 30 0 F 3046368 Aristaeellaceae 0.02 30 7 G 3046369 Aristaeella 0.02 23 23 S 3046382 Aristaeella hokkaidonensis 0.01 13 0 F 186807 Peptococcaceae 0.01 8 0 G 2924872 Acididesulfobacillus 0.01 8 8 S 1561005 Acididesulfobacillus acetoxydans 0.00 5 0 G 2840454 Candidatus Formimonas 0.00 5 5 S 1761012 Candidatus Formimonas warabiya 0.01 13 2 F 3082771 Acutalibacteraceae 0.01 10 0 G 1918385 Acutalibacter 0.01 10 10 S 1796620 Acutalibacter muris 0.00 1 1 G 1738645 Caproiciproducens 0.01 8 0 F 186806 Eubacteriaceae 0.01 7 0 G 1730 Eubacterium 0.00 5 5 S 39496 Eubacterium ventriosum 0.00 1 1 S 1736 Eubacterium limosum 0.00 1 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 1 1 S 2841528 Eubacterium sp. MSJ-33 0.00 1 1 G 33951 Acetobacterium 0.00 2 0 F 68298 Syntrophomonadaceae 0.00 2 0 G 129001 Syntrophothermus 0.00 2 0 S 86170 Syntrophothermus lipocalidus 0.00 2 2 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.00 1 0 F 2867375 Desulfallaceae 0.00 1 0 G 2867376 Desulfoscipio 0.00 1 0 S 102134 Desulfoscipio gibsoniae 0.00 1 1 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 1 0 F 2937910 Desulfotomaculaceae 0.00 1 0 G 1562 Desulfotomaculum 0.00 1 0 S 1565 Desulfotomaculum nigrificans 0.00 1 1 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 1.29 1702 1 O 3085636 Lachnospirales 1.28 1686 180 F 186803 Lachnospiraceae 0.32 416 246 G 572511 Blautia 0.11 140 0 S 40520 Blautia obeum 0.06 85 85 S1 657314 Blautia obeum A2-162 0.04 55 55 S1 411459 Blautia obeum ATCC 29174 0.01 16 0 G1 2648079 unclassified Blautia 0.01 16 16 S 2479767 Blautia sp. SC05B48 0.00 6 0 S 53443 Blautia hydrogenotrophica 0.00 6 6 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 4 4 S 1912897 Blautia argi 0.00 3 3 S 89014 Blautia luti 0.00 1 1 S 2779518 Blautia liquoris 0.16 217 0 G 1766253 Agathobacter 0.16 217 217 S 39491 Agathobacter rectalis 0.09 120 94 G 841 Roseburia 0.01 14 14 S 301301 Roseburia hominis 0.01 11 0 G1 2637578 unclassified Roseburia 0.01 8 8 S 1261634 Roseburia sp. 499 0.00 3 3 S 1261635 Roseburia sp. 831b 0.00 1 1 S 166486 Roseburia intestinalis 0.09 112 6 G 207244 Anaerostipes 0.08 100 100 S 649756 Anaerostipes hadrus 0.00 4 0 G1 2635253 unclassified Anaerostipes 0.00 4 4 S 3036926 Anaerostipes sp. PC18 0.00 2 2 S 1229621 Anaerostipes rhamnosivorans 0.07 86 21 G 2316020 Mediterraneibacter 0.04 53 2 S 33039 [Ruminococcus] torques 0.04 51 51 S1 657313 [Ruminococcus] torques L2-14 0.01 10 10 S 33038 Mediterraneibacter gnavus 0.00 2 0 S 46228 [Ruminococcus] lactaris 0.00 2 2 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.06 80 0 G 2569097 Anaerobutyricum 0.06 80 80 S 39488 Anaerobutyricum hallii 0.05 72 0 G 1506553 Lachnoclostridium 0.03 37 37 S 1512 [Clostridium] symbiosum 0.02 25 25 S 29347 [Clostridium] scindens 0.00 6 6 S 1871021 Lachnoclostridium phocaeense 0.00 3 3 S 89153 [Clostridium] hylemonae 0.00 1 0 S 66219 Lachnoclostridium phytofermentans 0.00 1 1 S1 357809 Lachnoclostridium phytofermentans ISDg 0.04 55 0 G 3031933 Chordicoccus 0.04 55 55 S 2709410 Chordicoccus furentiruminis 0.04 53 0 G 189330 Dorea 0.03 44 44 S 88431 Dorea longicatena 0.01 9 9 S 39486 Dorea formicigenerans 0.03 41 0 G 248744 Marvinbryantia 0.03 41 0 S 168384 Marvinbryantia formatexigens 0.03 41 41 S1 478749 Marvinbryantia formatexigens DSM 14469 0.02 32 31 G 1843210 Anaerocolumna 0.00 1 0 G1 2642604 unclassified Anaerocolumna 0.00 1 1 S 3081750 Anaerocolumna sp. AGMB13020 0.02 27 5 G 33042 Coprococcus 0.01 15 15 S 116085 Coprococcus catus 0.00 5 5 S 410072 Coprococcus comes 0.00 2 0 G1 2684943 unclassified Coprococcus 0.00 2 2 S 751585 Coprococcus sp. ART55/1 0.02 21 0 G 2163168 Kineothrix 0.02 21 0 G1 2625420 unclassified Kineothrix 0.01 11 11 S 3123317 Kineothrix sp. IPX-CK 0.01 10 10 S 3070215 Kineothrix sp. MB12-C1 0.01 19 0 G 1213720 Stomatobaculum 0.01 19 0 G1 2643635 unclassified Stomatobaculum 0.01 19 19 S 3059030 Stomatobaculum sp. F0698 0.01 17 3 G 1164882 Lachnoanaerobaculum 0.01 9 9 S 617123 Lachnoanaerobaculum umeaense 0.00 5 5 S 2490855 Lachnoanaerobaculum gingivalis 0.01 17 0 G 1506577 Tyzzerella 0.01 17 17 S 36835 [Clostridium] colinum 0.01 16 0 G 28050 Lachnospira 0.01 16 16 S 39485 Lachnospira eligens 0.01 15 6 G 830 Butyrivibrio 0.01 7 7 S 45851 Butyrivibrio crossotus 0.00 1 1 S 831 Butyrivibrio fibrisolvens 0.00 1 0 S 43305 Butyrivibrio proteoclasticus 0.00 1 1 S1 515622 Butyrivibrio proteoclasticus B316 0.01 14 0 G 2944193 Simiaoa 0.01 14 14 S 2763672 Simiaoa sunii 0.01 14 9 G 2719231 Lacrimispora 0.00 4 4 S 384636 Lacrimispora xylanisolvens 0.00 1 1 S 29375 Lacrimispora xylanolytica 0.01 13 0 G 3024823 Anaeromicropila 0.01 13 13 S 2785025 Anaeromicropila herbilytica 0.01 12 0 G 3088373 Chakrabartyella 0.01 12 12 S 2918914 Chakrabartyella piscis 0.01 11 0 G 2944195 Qiania 0.01 11 11 S 2763669 Qiania dongpingensis 0.01 10 0 G 1769710 Sellimonas 0.01 10 10 S 1653434 Sellimonas intestinalis 0.01 7 1 G 2719313 Enterocloster 0.00 6 6 S 208479 Enterocloster bolteae 0.00 3 0 G 1663717 Herbinix 0.00 3 3 S 1679721 Herbinix luporum 0.00 1 0 G 2944198 Wansuia 0.00 1 1 S 2763667 Wansuia hejianensis 0.00 1 0 G 2997360 Anaeropeptidivorans 0.00 1 1 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 0 G 1649459 Hungatella 0.00 1 1 S 154046 Hungatella hathewayi 0.00 1 0 G 46205 Pseudobutyrivibrio 0.00 1 1 S 185007 Pseudobutyrivibrio xylanivorans 0.00 1 0 G 3076670 Claveliimonas 0.00 1 1 S 3028070 Claveliimonas bilis 0.00 1 0 G 2383 Candidatus Epulonipiscium 0.00 1 1 S 420336 Candidatus Epulonipiscium viviparus 0.01 13 0 F 2603322 Vallitaleaceae 0.01 13 0 G 2603323 Petrocella 0.01 13 13 S 2173034 Petrocella atlantisensis 0.00 1 0 F 1185407 Defluviitaleaceae 0.00 1 0 G 1185408 Defluviitalea 0.00 1 1 S 879970 Defluviitalea saccharophila 0.00 1 0 F 3018741 Cellulosilyticaceae 0.00 1 1 G 698776 Cellulosilyticum 0.28 372 1 O 3082720 Peptostreptococcales 0.27 351 114 F 186804 Peptostreptococcaceae 0.09 116 24 G 1505652 Terrisporobacter 0.07 91 91 S 1460447 Terrisporobacter petrolearius 0.00 1 1 S 2813371 Terrisporobacter hibernicus 0.05 61 30 G 1501226 Romboutsia 0.02 31 0 G1 2626894 unclassified Romboutsia 0.02 30 30 S 2708053 Romboutsia sp. 13368 0.00 1 1 S 2724150 Romboutsia sp. CE17 0.03 38 0 G 1505657 Intestinibacter 0.03 38 38 S 261299 Intestinibacter bartlettii 0.01 17 0 G 1870884 Clostridioides 0.01 17 17 S 1496 Clostridioides difficile 0.00 4 0 G 1849822 Paraclostridium 0.00 2 2 S 1490 Paraclostridium bifermentans 0.00 2 2 S 1505 Paraclostridium sordellii 0.00 1 0 G 1257 Peptostreptococcus 0.00 1 1 S 3003601 Peptostreptococcus equinus 0.01 13 0 F 3030910 Anaerovoracaceae 0.01 10 0 G 1926556 Emergencia 0.00 6 6 S 1776384 Emergencia timonensis 0.00 4 0 G1 2642996 unclassified Emergencia 0.00 4 4 S 3114296 Emergencia sp. JLR.KK010 0.00 3 3 G 2060094 Aminipila 0.00 5 0 F 3118656 Natronincolaceae 0.00 5 1 G 114627 Alkaliphilus 0.00 4 0 S 208226 Alkaliphilus metalliredigens 0.00 4 4 S1 293826 Alkaliphilus metalliredigens QYMF 0.00 1 0 F 3118654 Caminicellaceae 0.00 1 0 G 166484 Caminicella 0.00 1 1 S 166485 Caminicella sporogenes 0.00 1 0 F 3118655 Filifactoraceae 0.00 1 0 G 44259 Filifactor 0.00 1 0 S 143361 Filifactor alocis 0.00 1 1 S1 546269 Filifactor alocis ATCC 35896 0.01 10 0 O 3082768 Christensenellales 0.01 10 0 F 990719 Christensenellaceae 0.01 10 5 G 990721 Christensenella 0.00 5 5 S 1805714 Christensenella massiliensis 0.00 1 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 1 0 G 252965 Mahella 0.00 1 0 S 252966 Mahella australiensis 0.00 1 1 S1 697281 Mahella australiensis 50-1 BON 0.26 341 6 C 91061 Bacilli 0.14 179 3 O 186826 Lactobacillales 0.05 62 0 F 1300 Streptococcaceae 0.04 58 50 G 1301 Streptococcus 0.00 3 3 S 1346 Streptococcus iniae 0.00 1 1 S 68892 Streptococcus infantis 0.00 1 1 S 1348 Streptococcus parauberis 0.00 1 1 S 1335 Streptococcus equinus 0.00 1 1 S 1311 Streptococcus agalactiae 0.00 1 1 S 1310 Streptococcus sobrinus 0.00 4 4 G 1357 Lactococcus 0.05 62 0 F 33958 Lactobacillaceae 0.03 37 30 G 2767887 Ligilactobacillus 0.00 4 0 S 1622 Ligilactobacillus murinus 0.00 4 4 S1 1235801 Ligilactobacillus murinus ASF361 0.00 2 2 S 1624 Ligilactobacillus salivarius 0.00 1 1 S 762833 Ligilactobacillus faecis 0.01 12 6 G 1578 Lactobacillus 0.00 3 3 S 147802 Lactobacillus iners 0.00 2 0 S 1584 Lactobacillus delbrueckii 0.00 2 2 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 1 S 508451 Lactobacillus taiwanensis 0.00 5 0 G 2767881 Fructilactobacillus 0.00 5 5 S 1614 Fructilactobacillus fructivorans 0.00 4 0 G 2742598 Limosilactobacillus 0.00 3 3 S 97478 Limosilactobacillus mucosae 0.00 1 1 S 1633 Limosilactobacillus vaginalis 0.00 2 2 G 46255 Weissella 0.00 1 0 G 2767842 Lactiplantibacillus 0.00 1 1 S 1590 Lactiplantibacillus plantarum 0.00 1 0 G 2767877 Apilactobacillus 0.00 1 1 S 2923364 Apilactobacillus apisilvae 0.03 41 0 F 81852 Enterococcaceae 0.03 33 21 G 1350 Enterococcus 0.01 12 12 S 1351 Enterococcus faecalis 0.01 8 2 G 2737 Vagococcus 0.00 6 6 S 218144 Vagococcus carniphilus 0.01 10 6 F 186828 Carnobacteriaceae 0.00 4 0 G 117563 Granulicatella 0.00 4 4 S 46124 Granulicatella adiacens 0.00 1 0 F 186827 Aerococcaceae 0.00 1 1 G 1375 Aerococcus 0.12 156 11 O 1385 Bacillales 0.06 81 28 F 186817 Bacillaceae 0.01 19 0 G 1386 Bacillus 0.01 13 0 G1 653685 Bacillus subtilis group 0.01 13 0 G2 1938374 Bacillus amyloliquefaciens group 0.01 11 11 S 492670 Bacillus velezensis 0.00 2 2 S 1390 Bacillus amyloliquefaciens 0.00 3 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 2 2 S 2841656 Bacillus sp. ZHX3 0.00 1 1 S 467262 Bacillus sp. T3 0.00 2 0 G1 86661 Bacillus cereus group 0.00 1 0 S 1396 Bacillus cereus 0.00 1 1 S1 288681 Bacillus cereus E33L 0.00 1 1 S 2026186 Bacillus paranthracis 0.00 1 0 G1 1792192 Bacillus altitudinis complex 0.00 1 1 S 293387 Bacillus altitudinis 0.01 7 0 G 2675232 Neobacillus 0.01 7 1 G1 2675272 unclassified Neobacillus 0.00 6 6 S 3048535 Neobacillus sp. 114 0.00 6 0 G 2837504 Heyndrickxia 0.00 6 6 S 1398 Heyndrickxia coagulans 0.00 3 0 G 459532 Terribacillus 0.00 3 3 S 586416 Terribacillus aidingensis 0.00 3 3 G 2675231 Mesobacillus 0.00 2 0 G 2675230 Cytobacillus 0.00 2 2 S 859143 Cytobacillus kochii 0.00 2 2 G 129337 Geobacillus 0.00 2 0 G 84406 Virgibacillus 0.00 2 2 S 447199 Virgibacillus salarius 0.00 2 0 G 45667 Halobacillus 0.00 2 2 S 45668 Halobacillus litoralis 0.00 1 0 G 175304 Lentibacillus 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.00 1 1 G 1329200 Fictibacillus 0.00 1 0 G 1906945 Parageobacillus 0.00 1 0 S 1426 Parageobacillus thermoglucosidasius 0.00 1 1 S1 634956 Parageobacillus thermoglucosidasius C56-YS93 0.00 1 0 G 2005375 Alkalicoccus 0.00 1 1 S 1667239 Alkalicoccus halolimnae 0.00 1 0 G 74385 Gracilibacillus 0.00 1 1 S 2663022 Gracilibacillus salitolerans 0.00 1 0 G 400634 Lysinibacillus 0.00 1 1 S 28031 Lysinibacillus fusiformis 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.03 39 0 F 186818 Planococcaceae 0.03 39 25 G 1372 Planococcus 0.01 14 14 S 192421 Planococcus maritimus 0.01 11 0 F 90964 Staphylococcaceae 0.01 11 1 G 1279 Staphylococcus 0.01 9 9 S 1280 Staphylococcus aureus 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 5 0 F 186822 Paenibacillaceae 0.00 4 1 G 44249 Paenibacillus 0.00 3 0 G1 185978 unclassified Paenibacillus 0.00 2 2 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 715179 Paenibacillus sp. sptzw28 0.00 1 0 G 329857 Cohnella 0.00 1 1 S 2598458 Cohnella cholangitidis 0.00 4 0 F 186821 Sporolactobacillaceae 0.00 3 0 G 2077 Sporolactobacillus 0.00 3 0 G1 2628533 unclassified Sporolactobacillus 0.00 3 3 S 3160863 Sporolactobacillus sp. Y61 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 3 0 F 539738 Gemellaceae 0.00 3 2 G 1378 Gemella 0.00 1 1 S 84135 Gemella sanguinis 0.00 1 0 F 186823 Alicyclobacillaceae 0.00 1 0 G 29330 Alicyclobacillus 0.00 1 1 S 2931921 Alicyclobacillus mengziensis 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 F 539003 Bacillales Family X. Incertae Sedis 0.00 1 0 G 1609627 Hydrogenibacillus 0.00 1 0 G1 2773237 unclassified Hydrogenibacillus 0.00 1 1 S 2866627 Hydrogenibacillus sp. N12 0.10 136 0 C 526524 Erysipelotrichia 0.10 136 0 O 526525 Erysipelotrichales 0.05 67 0 F 2810281 Turicibacteraceae 0.05 67 61 G 191303 Turicibacter 0.00 6 6 S 154288 Turicibacter sanguinis 0.04 50 0 F 128827 Erysipelotrichaceae 0.02 32 0 G 1729679 Faecalibaculum 0.02 32 32 S 1702221 Faecalibaculum rodentium 0.01 15 0 G 174708 Allobaculum 0.01 14 0 G1 2623473 unclassified Allobaculum 0.01 14 14 S 2853432 Allobaculum sp. Allo2 0.00 1 1 S 2834459 Allobaculum mucilyticum 0.00 3 0 G 2749267 Amedibacterium 0.00 3 3 S 2583452 Amedibacterium intestinale 0.01 19 0 F 2810280 Coprobacillaceae 0.01 9 1 G 3025755 Thomasclavelia 0.00 5 0 S 29348 Thomasclavelia spiroformis 0.00 5 5 S1 428126 Thomasclavelia spiroformis DSM 1552 0.00 3 3 S 1547 Thomasclavelia ramosa 0.00 5 0 G 2678885 Faecalibacillus 0.00 5 5 S 1982626 Faecalibacillus intestinalis 0.00 4 0 G 2943184 Tannockella 0.00 4 4 S 2899121 Tannockella kyphosi 0.00 1 0 G 135858 Catenibacterium 0.00 1 1 S 100886 Catenibacterium mitsuokai 0.02 23 0 C 909932 Negativicutes 0.01 12 0 O 1843489 Veillonellales 0.01 12 0 F 31977 Veillonellaceae 0.00 6 3 G 29465 Veillonella 0.00 2 2 S 39777 Veillonella atypica 0.00 1 1 S 29466 Veillonella parvula 0.00 6 2 G 39948 Dialister 0.00 4 4 S 487173 Dialister succinatiphilus 0.00 6 0 O 1843488 Acidaminococcales 0.00 6 0 F 909930 Acidaminococcaceae 0.00 6 0 G 33024 Phascolarctobacterium 0.00 6 6 S 626940 Phascolarctobacterium succinatutens 0.00 5 0 O 909929 Selenomonadales 0.00 3 0 F 1843491 Selenomonadaceae 0.00 3 0 G 158846 Megamonas 0.00 3 3 S 437897 Megamonas funiformis 0.00 2 0 F 1843490 Sporomusaceae 0.00 2 0 G 81463 Anaeromusa 0.00 2 0 G1 673272 environmental samples 0.00 2 2 S 673273 uncultured Anaeromusa sp. 0.01 7 1 C 1737404 Tissierellia 0.00 6 0 O 1737405 Tissierellales 0.00 3 1 F 1570339 Peptoniphilaceae 0.00 2 0 G 162289 Peptoniphilus 0.00 2 2 S 54006 Peptoniphilus ivorii 0.00 2 0 F 2992719 Tepidimicrobiaceae 0.00 2 0 G 1354809 Keratinibaculum 0.00 2 2 S 1278232 Keratinibaculum paraultunense 0.00 1 0 F 2042895 Gottschalkiaceae 0.00 1 0 G 1505664 Gottschalkia 0.00 1 0 S 1556 Gottschalkia acidurici 0.00 1 1 S1 1128398 Gottschalkia acidurici 9a 0.00 5 0 P1 84086 unclassified Bacillota 0.00 5 5 S 243899 endosymbiont 'TC1' of Trimyema compressum 0.00 1 0 C 1676648 Limnochordia 0.00 1 0 O 1676649 Limnochordales 0.00 1 0 F 1676650 Limnochordaceae 0.00 1 0 G 1676651 Limnochorda 0.00 1 1 G1 2618576 unclassified Limnochorda 0.34 453 4 P 201174 Actinomycetota 0.27 361 3 C 1760 Actinomycetes 0.11 143 0 O 85007 Mycobacteriales 0.08 106 0 F 85025 Nocardiaceae 0.08 105 0 G 1827 Rhodococcus 0.08 103 0 G1 2840174 Rhodococcus erythropolis group 0.08 103 103 S 1833 Rhodococcus erythropolis 0.00 2 2 S 38310 Rhodococcus coprophilus 0.00 1 0 G 1817 Nocardia 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975997 Nocardia sp. NBC_01503 0.03 35 0 F 1762 Mycobacteriaceae 0.02 25 0 G 1866885 Mycolicibacterium 0.02 24 24 S 370524 Mycolicibacterium pallens 0.00 1 0 S 46351 Mycolicibacterium hassiacum 0.00 1 1 S1 1122247 Mycolicibacterium hassiacum DSM 44199 0.01 10 0 G 1763 Mycobacterium 0.01 10 0 G1 77643 Mycobacterium tuberculosis complex 0.01 10 10 S 78331 Mycobacterium canetti 0.00 2 0 F 1653 Corynebacteriaceae 0.00 2 1 G 1716 Corynebacterium 0.00 1 1 S 61592 Corynebacterium durum 0.06 74 2 O 85009 Propionibacteriales 0.03 39 0 F 85015 Nocardioidaceae 0.03 38 0 G 1839 Nocardioides 0.03 36 36 S 2663857 Nocardioides marmotae 0.00 2 0 G1 2615069 unclassified Nocardioides 0.00 2 2 S 3036374 Nocardioides sp. BP30 0.00 1 0 G 2044 Pimelobacter 0.00 1 1 S 2045 Pimelobacter simplex 0.02 32 1 F 31957 Propionibacteriaceae 0.02 20 0 G 1912216 Cutibacterium 0.02 20 20 S 1747 Cutibacterium acnes 0.01 10 0 G 1743 Propionibacterium 0.01 10 10 S 1744 Propionibacterium freudenreichii 0.00 1 0 G 1085622 Propioniciclava 0.00 1 0 G1 2642922 unclassified Propioniciclava 0.00 1 1 S 2760308 Propioniciclava sp. MC1595 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 1 G 182639 Kribbella 0.04 59 0 O 85004 Bifidobacteriales 0.04 59 0 F 31953 Bifidobacteriaceae 0.04 59 45 G 1678 Bifidobacterium 0.01 12 9 S 216816 Bifidobacterium longum 0.00 2 2 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 1 S 28025 Bifidobacterium animalis 0.00 1 1 S 28026 Bifidobacterium pseudocatenulatum 0.03 33 2 O 85006 Micrococcales 0.01 18 5 F 1268 Micrococcaceae 0.00 6 6 G 1742989 Glutamicibacter 0.00 4 0 G 32207 Rothia 0.00 3 3 S 43675 Rothia mucilaginosa 0.00 1 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 3047030 Rothia sp. SD9660Na 0.00 2 2 G 1663 Arthrobacter 0.00 1 1 G 1742992 Paenarthrobacter 0.01 9 2 F 85023 Microbacteriaceae 0.00 6 0 G 33877 Agromyces 0.00 6 0 G1 2639701 unclassified Agromyces 0.00 6 6 S 2498704 Agromyces sp. LHK192 0.00 1 0 G 33882 Microbacterium 0.00 1 1 S 69362 Microbacterium schleiferi 0.00 3 0 F 85018 Dermatophilaceae 0.00 3 0 G 1184606 Austwickia 0.00 3 3 S 100225 Austwickia chelonae 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 157920 Cellulosimicrobium 0.00 1 1 S 2587808 Cellulosimicrobium protaetiae 0.03 33 0 O 85011 Kitasatosporales 0.03 33 1 F 2062 Streptomycetaceae 0.02 30 4 G 1883 Streptomyces 0.02 20 0 G1 2593676 unclassified Streptomyces 0.01 15 15 S 2933779 Streptomyces sp. WAC00303 0.00 3 3 S 1460244 Streptomyces sp. PCS3-D2 0.00 1 1 S 2975702 Streptomyces sp. NBC_00287 0.00 1 1 S 2903786 Streptomyces sp. NBC_01232 0.00 2 2 S 83291 Streptomyces armeniacus 0.00 2 0 G1 1477431 Streptomyces albidoflavus group 0.00 2 2 S 1886 Streptomyces albidoflavus 0.00 1 1 S 66425 Streptomyces luteoverticillatus 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 67350 Streptomyces pseudovenezuelae 0.00 1 0 G 2063 Kitasatospora 0.00 1 0 G1 2633591 unclassified Kitasatospora 0.00 1 1 S 2903570 Kitasatospora sp. NBC_01246 0.00 1 0 G 2995702 Actinacidiphila 0.00 1 1 S 235986 Actinacidiphila glaucinigra 0.01 7 0 O 2037 Actinomycetales 0.01 7 1 F 2049 Actinomycetaceae 0.00 4 0 G 1654 Actinomyces 0.00 4 4 G1 2609248 unclassified Actinomyces 0.00 1 1 G 28263 Arcanobacterium 0.00 1 0 G 2815785 Scrofimicrobium 0.00 1 0 G1 2815815 unclassified Scrofimicrobium 0.00 1 1 S 3079930 Scrofimicrobium sp. R131 0.00 3 0 O 85012 Streptosporangiales 0.00 3 0 F 2012 Thermomonosporaceae 0.00 3 0 G 2019 Thermomonospora 0.00 3 0 S 2020 Thermomonospora curvata 0.00 3 3 S1 471852 Thermomonospora curvata DSM 43183 0.00 2 0 O 85008 Micromonosporales 0.00 2 0 F 28056 Micromonosporaceae 0.00 2 0 G 1873 Micromonospora 0.00 2 2 S 47857 Micromonospora echinaurantiaca 0.00 2 0 O 85010 Pseudonocardiales 0.00 2 0 F 2070 Pseudonocardiaceae 0.00 1 0 G 40566 Actinosynnema 0.00 1 0 S 40567 Actinosynnema mirum 0.00 1 1 S1 446462 Actinosynnema mirum DSM 43827 0.00 1 0 G 43356 Kutzneria 0.00 1 0 S 43357 Kutzneria albida 0.00 1 1 S1 1449976 Kutzneria albida DSM 43870 0.00 1 0 O 2805415 Jatrophihabitantales 0.00 1 0 F 2805416 Jatrophihabitantaceae 0.00 1 0 G 1434010 Jatrophihabitans 0.00 1 1 S 2038343 Jatrophihabitans telluris 0.00 1 0 O 85014 Glycomycetales 0.00 1 0 F 85034 Glycomycetaceae 0.00 1 0 G 283810 Stackebrandtia 0.00 1 0 S 283811 Stackebrandtia nassauensis 0.00 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.06 75 0 C 84998 Coriobacteriia 0.03 42 1 O 84999 Coriobacteriales 0.02 29 0 F 84107 Coriobacteriaceae 0.02 29 0 G 102106 Collinsella 0.02 27 27 S 74426 Collinsella aerofaciens 0.00 2 2 S 147206 Collinsella stercoris 0.01 7 0 F 3153719 Kribbibacteriaceae 0.01 7 0 G 2995122 Leptogranulimonas 0.01 7 7 S 2894156 Leptogranulimonas caecicola 0.00 5 1 F 1643824 Atopobiaceae 0.00 2 0 G 133925 Olsenella 0.00 2 0 S 133926 Olsenella uli 0.00 2 2 S1 633147 Olsenella uli DSM 7084 0.00 2 2 G 2082587 Parolsenella 0.03 33 0 O 1643822 Eggerthellales 0.03 33 2 F 1643826 Eggerthellaceae 0.01 17 9 G 447020 Adlercreutzia 0.00 4 4 S 446660 Adlercreutzia equolifaciens 0.00 4 4 S 2707299 Adlercreutzia hattorii 0.00 6 0 G 644652 Gordonibacter 0.00 4 4 S 1335613 Gordonibacter urolithinfaciens 0.00 2 0 S 471189 Gordonibacter pamelaeae 0.00 2 2 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.00 3 0 G 1926677 Raoultibacter 0.00 3 3 S 1907662 Raoultibacter timonensis 0.00 3 0 G 1981050 Phoenicibacter 0.00 3 3 S 1944646 Phoenicibacter congonensis 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.01 10 1 C 1497346 Thermoleophilia 0.00 5 0 O 588674 Thermoleophilales 0.00 5 0 F 320796 Thermoleophilaceae 0.00 5 0 G 192992 Thermoleophilum 0.00 5 5 S 29539 Thermoleophilum album 0.00 4 0 O 588673 Solirubrobacterales 0.00 3 0 F 320583 Conexibacteraceae 0.00 3 0 G 191494 Conexibacter 0.00 3 0 G1 2627773 unclassified Conexibacter 0.00 2 2 S 2937801 Conexibacter sp. DBS9H8 0.00 1 1 S 2937800 Conexibacter sp. S30A1 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 1 G 2600304 Baekduia 0.00 2 0 C 84992 Acidimicrobiia 0.00 2 0 O 84993 Acidimicrobiales 0.00 2 0 F 2448023 Ilumatobacteraceae 0.00 2 0 G 682522 Ilumatobacter 0.00 2 0 S 467094 Ilumatobacter coccineus 0.00 2 2 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 1 G 42255 Rubrobacter 0.02 27 0 P 200795 Chloroflexota 0.01 15 0 C 292625 Anaerolineae 0.01 15 0 O 292629 Anaerolineales 0.01 15 0 F 292628 Anaerolineaceae 0.01 8 0 G 1649478 Pelolinea 0.01 8 8 S 913107 Pelolinea submarina 0.00 6 0 G 233189 Anaerolinea 0.00 6 0 S 167964 Anaerolinea thermophila 0.00 6 6 S1 926569 Anaerolinea thermophila UNI-1 0.00 1 0 G 2019482 Brevefilum 0.00 1 1 S 1986204 Brevefilum fermentans 0.00 4 0 C 301297 Dehalococcoidia 0.00 4 0 O 1202465 Dehalococcoidales 0.00 4 0 F 1202464 Dehalococcoidaceae 0.00 3 3 G 61434 Dehalococcoides 0.00 1 0 G 670486 Dehalogenimonas 0.00 1 0 G1 2638108 unclassified Dehalogenimonas 0.00 1 1 S 3166643 Dehalogenimonas sp. 4OHTPN 0.00 3 0 C 2682225 Tepidiformia 0.00 3 0 O 2682226 Tepidiformales 0.00 3 0 F 2682227 Tepidiformaceae 0.00 3 0 G 2682228 Tepidiforma 0.00 3 3 S 2601677 Tepidiforma bonchosmolovskayae 0.00 2 0 C 1495646 Thermoflexia 0.00 2 0 O 1495647 Thermoflexales 0.00 2 0 F 1495648 Thermoflexaceae 0.00 2 0 G 1495649 Thermoflexus 0.00 2 2 S 1495650 Thermoflexus hugenholtzii 0.00 1 0 C 32061 Chloroflexia 0.00 1 1 O 32064 Chloroflexales 0.00 1 0 C 1382928 Ardenticatenia 0.00 1 0 O 3085098 Candidatus Promineifilales 0.00 1 0 F 3085097 Candidatus Promineifilaceae 0.00 1 0 G 1988031 Candidatus Promineifilum 0.00 1 1 S 1806508 Candidatus Promineifilum breve 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.01 12 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.01 12 0 P 1117 Cyanobacteriota 0.01 12 0 C 3028117 Cyanophyceae 0.01 7 0 O 1161 Nostocales 0.01 7 0 F 1892263 Hapalosiphonaceae 0.01 7 0 G 1190 Fischerella 0.01 7 0 G1 494603 unclassified Fischerella 0.01 7 7 S 2597771 Fischerella sp. JS2 0.00 2 2 O 307595 Gloeobacterales 0.00 1 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1150 Oscillatoriales 0.00 1 0 F 2934961 Sirenicapillariaceae 0.00 1 0 G 2596745 Limnospira 0.00 1 0 S 147322 Limnospira indica 0.00 1 1 S1 2760438 Limnospira indica BM01 0.00 1 0 O 3079749 Leptolyngbyales 0.00 1 0 F 1890438 Leptolyngbyaceae 0.00 1 0 F1 3081713 Leptolyngbya group 0.00 1 0 G 47251 Leptolyngbya 0.00 1 0 G1 2650499 unclassified Leptolyngbya 0.00 1 1 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 3079753 Coleofasciculales 0.00 1 0 F 1892251 Coleofasciculaceae 0.00 1 0 G 2886347 Allocoleopsis 0.00 1 0 S 2886352 Allocoleopsis franciscana 0.00 1 1 S1 1173027 Allocoleopsis franciscana PCC 7113 0.00 6 5 P 544448 Mycoplasmatota 0.00 1 0 O 2790996 Mycoplasmoidales 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2767358 Mycoplasmopsis 0.00 1 1 S 33923 Mycoplasmopsis felis 0.00 1 0 P 67819 Armatimonadota 0.00 1 0 C 1077257 Chthonomonadia 0.00 1 0 O 1077263 Chthonomonadales 0.00 1 0 F 1077264 Chthonomonadaceae 0.00 1 0 G 1077265 Chthonomonas 0.00 1 0 S 454171 Chthonomonas calidirosea 0.00 1 1 S1 1303518 Chthonomonas calidirosea T49 0.00 1 0 P 1154676 Vulcanimicrobiota 0.00 1 0 C 2829293 Vulcanimicrobiia 0.00 1 0 O 2599632 Vulcanimicrobiales 0.00 1 0 F 2829291 Vulcanimicrobiaceae 0.00 1 0 G 3016049 Vulcanimicrobium 0.00 1 1 S 3016050 Vulcanimicrobium alpinum 0.83 1089 0 D1 1783270 FCB group 0.83 1087 0 D2 68336 Bacteroidota/Chlorobiota group 0.83 1087 2 P 976 Bacteroidota 0.76 996 0 C 200643 Bacteroidia 0.76 996 15 O 171549 Bacteroidales 0.44 574 33 F 2005473 Muribaculaceae 0.14 182 2 G 1918540 Muribaculum 0.13 173 173 S 2530390 Muribaculum gordoncarteri 0.01 7 7 S 1796646 Muribaculum intestinale 0.14 182 0 G 2518497 Paramuribaculum 0.14 182 182 S 2094151 Paramuribaculum intestinale 0.13 172 8 G 2518495 Duncaniella 0.10 134 132 G1 2649562 unclassified Duncaniella 0.00 2 2 S 2576606 Duncaniella sp. B8 0.02 30 30 S 2518971 Duncaniella dubosii 0.00 5 0 G 2815786 Sodaliphilus 0.00 5 5 S 2606626 Sodaliphilus pleomorphus 0.21 270 23 F 815 Bacteroidaceae 0.12 157 32 G 816 Bacteroides 0.02 32 0 S 290053 Bacteroides helcogenes 0.02 32 32 S1 693979 Bacteroides helcogenes P 36-108 0.02 23 23 S 1796613 Bacteroides caecimuris 0.02 22 22 S 820 Bacteroides uniformis 0.01 14 14 S 817 Bacteroides fragilis 0.01 13 13 S 28113 Bacteroides heparinolyticus 0.00 6 6 S 329854 Bacteroides intestinalis 0.00 5 5 S 47678 Bacteroides caccae 0.00 2 0 G1 2646097 unclassified Bacteroides 0.00 2 2 S 3117552 Bacteroides sp. MSB163 0.00 2 2 S 28116 Bacteroides ovatus 0.00 2 2 S 338188 Bacteroides finegoldii 0.00 2 2 S 291644 Bacteroides salyersiae 0.00 1 1 S 818 Bacteroides thetaiotaomicron 0.00 1 1 S 291645 Bacteroides nordii 0.07 90 6 G 909656 Phocaeicola 0.04 49 0 S 376805 Phocaeicola salanitronis 0.04 49 49 S1 667015 Phocaeicola salanitronis DSM 18170 0.03 33 33 S 821 Phocaeicola vulgatus 0.00 2 2 S 357276 Phocaeicola dorei 0.04 57 0 F 171550 Rikenellaceae 0.03 42 3 G 239759 Alistipes 0.01 9 0 S 328814 Alistipes shahii 0.01 9 9 S1 717959 Alistipes shahii WAL 8301 0.01 8 2 S 214856 Alistipes finegoldii 0.00 6 6 S1 679935 Alistipes finegoldii DSM 17242 0.01 8 8 S 2364787 Alistipes megaguti 0.00 5 0 G1 538948 environmental samples 0.00 5 5 S 538949 uncultured Alistipes sp. 0.00 4 4 S 328813 Alistipes onderdonkii 0.00 2 2 S 2585118 Alistipes communis 0.00 1 1 S 626932 Alistipes indistinctus 0.00 1 1 S 1288121 Alistipes senegalensis 0.00 1 1 S 2585119 Alistipes dispar 0.01 15 0 G 1647173 Acetobacteroides 0.01 15 0 G1 1760810 environmental samples 0.01 15 15 S 1760811 uncultured Acetobacteroides sp. 0.03 35 0 F 2005525 Tannerellaceae 0.03 33 28 G 375288 Parabacteroides 0.00 3 2 S 46503 Parabacteroides merdae 0.00 1 1 S1 411477 Parabacteroides merdae ATCC 43184 0.00 1 1 S 823 Parabacteroides distasonis 0.00 1 1 S 2685834 Parabacteroides chongii 0.00 2 1 G 195950 Tannerella 0.00 1 1 S 712710 Tannerella serpentiformis 0.02 27 3 F 171552 Prevotellaceae 0.01 10 2 G 577309 Paraprevotella 0.01 8 8 S 454154 Paraprevotella clara 0.01 8 4 G 838 Prevotella 0.00 3 3 S 28132 Prevotella melaninogenica 0.00 1 1 S 470565 Prevotella histicola 0.00 5 0 G 2974251 Segatella 0.00 5 4 S 165179 Segatella copri 0.00 1 1 S1 537011 Segatella copri DSM 18205 0.00 1 0 G 2974257 Hoylesella 0.00 1 1 S 76123 Hoylesella enoeca 0.01 12 0 F 1853231 Odoribacteraceae 0.01 7 0 G 283168 Odoribacter 0.01 7 7 S 28118 Odoribacter splanchnicus 0.00 5 4 G 574697 Butyricimonas 0.00 1 1 S 544645 Butyricimonas virosa 0.00 4 0 F 2005520 Dysgonomonadaceae 0.00 2 0 G 156973 Dysgonomonas 0.00 2 2 S 45254 Dysgonomonas capnocytophagoides 0.00 2 0 G 307628 Petrimonas 0.00 2 2 S 1642646 Petrimonas mucosa 0.00 1 0 F 171551 Porphyromonadaceae 0.00 1 0 G 836 Porphyromonas 0.00 1 1 S 393921 Porphyromonas crevioricanis 0.00 1 0 F 2005519 Barnesiellaceae 0.00 1 1 G 1348911 Coprobacter 0.05 61 0 C 117743 Flavobacteriia 0.05 61 6 O 200644 Flavobacteriales 0.04 49 0 F 2762318 Weeksellaceae 0.04 49 0 F1 2782232 Chryseobacterium group 0.04 49 31 G 59732 Chryseobacterium 0.01 17 17 S 2929799 Chryseobacterium oryzae 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.00 6 2 F 49546 Flavobacteriaceae 0.00 1 0 G 237 Flavobacterium 0.00 1 0 G1 196869 unclassified Flavobacterium 0.00 1 1 S 2775246 Flavobacterium sp. CS20 0.00 1 0 G 2913017 Aggregatimonas 0.00 1 1 S 2583587 Aggregatimonas sangjinii 0.00 1 0 G 216431 Croceibacter 0.00 1 1 S 313588 Croceibacter atlanticus 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.01 16 0 C 768503 Cytophagia 0.01 16 9 O 768507 Cytophagales 0.00 3 0 F 2762286 Fulvivirgaceae 0.00 3 0 G 1433993 Chryseolinea 0.00 3 3 S 2321403 Chryseolinea soli 0.00 2 0 F 563798 Cyclobacteriaceae 0.00 1 0 G 246875 Algoriphagus 0.00 1 0 G1 2641541 unclassified Algoriphagus 0.00 1 1 S 2705473 Algoriphagus sp. NBT04N3 0.00 1 0 G 280472 Aquiflexum 0.00 1 0 S 280473 Aquiflexum balticum 0.00 1 1 S1 758820 Aquiflexum balticum DSM 16537 0.00 1 0 F 89373 Cytophagaceae 0.00 1 0 G 107 Spirosoma 0.00 1 1 S 2666025 Spirosoma endbachense 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 1 G 323449 Pontibacter 0.01 7 0 C 117747 Sphingobacteriia 0.01 7 0 O 200666 Sphingobacteriales 0.00 4 2 F 84566 Sphingobacteriaceae 0.00 2 0 G 1649482 Pseudopedobacter 0.00 2 0 S 151895 Pseudopedobacter saltans 0.00 2 2 S1 762903 Pseudopedobacter saltans DSM 12145 0.00 3 0 F 3088888 Aurantibacillaceae 0.00 3 0 G 3088889 Aurantibacillus 0.00 3 3 S 3036359 Aurantibacillus circumpalustris 0.00 5 0 C 1853228 Chitinophagia 0.00 5 0 O 1853229 Chitinophagales 0.00 5 0 F 563835 Chitinophagaceae 0.00 1 0 G 379899 Niabella 0.00 1 1 S 1176587 Niabella ginsenosidivorans 0.00 1 0 G 398041 Flavisolibacter 0.00 1 1 S 1492898 Flavisolibacter tropicus 0.00 1 0 G 504481 Sediminibacterium 0.00 1 0 G1 2635961 unclassified Sediminibacterium 0.00 1 1 S 575378 Sediminibacterium sp. TEGAF015 0.00 1 0 G 79328 Chitinophaga 0.00 1 1 S 2920382 Chitinophaga horti 0.00 1 0 G 1649506 Thermoflavifilum 0.00 1 0 G1 3099314 unclassified Thermoflavifilum 0.00 1 1 S 1968839 Thermoflavifilum sp. 0.00 2 0 P 142182 Gemmatimonadota 0.00 2 0 C 219685 Gemmatimonadia 0.00 2 0 O 219686 Gemmatimonadales 0.00 2 0 F 219687 Gemmatimonadaceae 0.00 1 0 G 173479 Gemmatimonas 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.00 1 0 G 1706036 Gemmatirosa 0.00 1 1 S 861299 Gemmatirosa kalamazoonensis 0.63 828 0 P 203691 Spirochaetota 0.63 828 0 C 203692 Spirochaetia 0.63 827 0 O 136 Spirochaetales 0.63 827 0 F 2845253 Treponemataceae 0.63 827 823 G 157 Treponema 0.00 1 0 G1 2638727 unclassified Treponema 0.00 1 1 S 1539298 Treponema sp. OMZ 838 0.00 1 1 S 744515 Treponema ruminis 0.00 1 1 S 409322 Treponema pedis 0.00 1 0 S 167 Treponema succinifaciens 0.00 1 1 S1 869209 Treponema succinifaciens DSM 2489 0.00 1 0 O 1643688 Leptospirales 0.00 1 0 F 170 Leptospiraceae 0.00 1 1 G 171 Leptospira 0.10 136 5 P 200940 Thermodesulfobacteriota 0.08 99 0 C 3031449 Desulfovibrionia 0.08 99 0 O 213115 Desulfovibrionales 0.07 98 6 F 194924 Desulfovibrionaceae 0.04 51 0 G 3126915 Taurinivorans 0.04 51 51 S 2787751 Taurinivorans muris 0.02 29 1 G 872 Desulfovibrio 0.01 14 14 S 876 Desulfovibrio desulfuricans 0.00 6 6 S 1725232 Candidatus Desulfovibrio trichonymphae 0.00 5 5 S 44742 Desulfovibrio fairfieldensis 0.00 2 0 G1 2593640 unclassified Desulfovibrio 0.00 2 2 S 631220 Desulfovibrio sp. G11 0.00 1 1 S 901 Desulfovibrio piger 0.01 10 10 G 2794998 Maridesulfovibrio 0.00 1 0 G 2035811 Pseudodesulfovibrio 0.00 1 0 S 182210 Pseudodesulfovibrio aespoeensis 0.00 1 1 S1 643562 Pseudodesulfovibrio aespoeensis Aspo-2 0.00 1 0 G 2773294 Desulfolutivibrio 0.00 1 1 S 2773299 Desulfolutivibrio sulfoxidireducens 0.00 1 0 F 213116 Desulfomicrobiaceae 0.00 1 0 G 898 Desulfomicrobium 0.00 1 0 S 132132 Desulfomicrobium orale 0.00 1 1 S1 888061 Desulfomicrobium orale DSM 12838 0.01 11 0 C 3031646 Desulfarculia 0.01 11 0 O 453227 Desulfarculales 0.01 11 7 F 453228 Desulfarculaceae 0.00 4 0 G 3093638 Desulfoferula 0.00 4 4 S 3058419 Desulfoferula mesophila 0.01 9 0 C 3031648 Syntrophia 0.01 9 0 O 2914038 Syntrophales 0.01 9 0 F 213468 Syntrophaceae 0.01 9 0 G 43773 Syntrophus 0.01 9 0 S 316277 Syntrophus aciditrophicus 0.01 9 9 S1 56780 Syntrophus aciditrophicus SB 0.00 4 0 C 3031451 Desulfobulbia 0.00 4 0 O 3024411 Desulfobulbales 0.00 4 0 F 213121 Desulfobulbaceae 0.00 4 0 G 893 Desulfobulbus 0.00 2 2 S 1986146 Desulfobulbus oralis 0.00 1 0 G1 111746 environmental samples 0.00 1 1 S 239745 uncultured Desulfobulbus sp. 0.00 1 1 S 1909699 Desulfobulbus oligotrophicus 0.00 3 0 C 3024418 Desulfobacteria 0.00 3 3 O 213118 Desulfobacterales 0.00 3 0 C 3031651 Desulfuromonadia 0.00 3 0 O 3031668 Geobacterales 0.00 3 0 F 213422 Geobacteraceae 0.00 2 0 G 28231 Geobacter 0.00 1 0 S 35554 Geobacter sulfurreducens 0.00 1 1 S1 1260928 Geobacter sulfurreducens subsp. ethanolicus 0.00 1 1 S 345632 Geobacter pickeringii 0.00 1 0 G 115782 Trichlorobacter 0.00 1 1 S 313985 Trichlorobacter lovleyi 0.00 2 0 C 3031647 Desulfobaccia 0.00 2 0 O 3031655 Desulfobaccales 0.00 2 0 F 3031656 Desulfobaccaceae 0.00 2 0 G 60892 Desulfobacca 0.00 2 0 S 60893 Desulfobacca acetoxidans 0.00 2 2 S1 880072 Desulfobacca acetoxidans DSM 11109 0.03 34 0 P 29547 Campylobacterota 0.03 34 0 C 3031852 Epsilonproteobacteria 0.02 32 0 O 213849 Campylobacterales 0.02 32 0 F 72293 Helicobacteraceae 0.02 32 21 G 209 Helicobacter 0.00 4 4 S 135569 Helicobacter apodemus 0.00 3 3 S 29419 Helicobacter canis 0.00 2 2 S 76936 Helicobacter typhlonius 0.00 1 1 S 287948 Helicobacter mastomyrinus 0.00 1 1 S 222136 Helicobacter enhydrae 0.00 2 0 O 235899 Nautiliales 0.00 2 0 F 2795691 Nitratiruptoraceae 0.00 2 0 G 269258 Nitratiruptor 0.00 2 2 G1 2624044 unclassified Nitratiruptor 0.02 31 0 D1 1783257 PVC group 0.02 29 0 P 74201 Verrucomicrobiota 0.02 28 0 C 203494 Verrucomicrobiia 0.02 28 0 O 48461 Verrucomicrobiales 0.02 27 0 F 1647988 Akkermansiaceae 0.02 27 3 G 239934 Akkermansia 0.02 24 24 S 239935 Akkermansia muciniphila 0.00 1 0 F 203557 Verrucomicrobiaceae 0.00 1 0 G 518753 Luteolibacter 0.00 1 1 S 2728835 Luteolibacter luteus 0.00 1 0 C 414999 Opitutia 0.00 1 0 O 415000 Opitutales 0.00 1 1 F 134623 Opitutaceae 0.00 2 0 P 203682 Planctomycetota 0.00 2 0 C 203683 Planctomycetia 0.00 1 0 O 2691354 Pirellulales 0.00 1 0 F 2691357 Pirellulaceae 0.00 1 0 G 2795775 Lignipirellula 0.00 1 1 S 2528010 Lignipirellula cremea 0.00 1 0 O 2691355 Gemmatales 0.00 1 0 F 1914233 Gemmataceae 0.00 1 0 G 113 Gemmata 0.00 1 1 S 114 Gemmata obscuriglobus 0.01 14 0 P 40117 Nitrospirota 0.01 12 0 C 2811502 Thermodesulfovibrionia 0.01 12 0 O 2811503 Thermodesulfovibrionales 0.01 12 0 F 2811505 Dissulfurispiraceae 0.01 12 0 G 2811506 Dissulfurispira 0.01 12 12 S 2715679 Dissulfurispira thermophila 0.00 2 0 C 203693 Nitrospiria 0.00 2 0 O 189778 Nitrospirales 0.00 2 0 F 189779 Nitrospiraceae 0.00 2 1 G 179 Leptospirillum 0.00 1 0 G1 655606 Leptospirillum sp. Group I 0.00 1 0 S 180 Leptospirillum ferrooxidans 0.00 1 1 S1 1162668 Leptospirillum ferrooxidans C2-3 0.01 11 0 D1 2323 Bacteria incertae sedis 0.01 11 0 D2 1783234 Bacteria candidate phyla 0.01 11 8 P 95818 Candidatus Saccharibacteria 0.00 2 0 C 2093818 Candidatus Saccharimonadia 0.00 2 0 O 2093825 Candidatus Saccharimonadales 0.00 2 0 F 2171986 Candidatus Saccharimonadaceae 0.00 2 0 G 1331051 Candidatus Saccharimonas 0.00 2 2 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 1 0 G 2831665 Candidatus Mycosynbacter 0.00 1 1 S 2665156 Candidatus Mycosynbacter amalyticus 0.01 9 0 P 57723 Acidobacteriota 0.00 4 0 C 204432 Terriglobia 0.00 3 0 O 332160 Bryobacterales 0.00 3 0 F 1962910 Bryobacteraceae 0.00 3 3 G 1649475 Paludibaculum 0.00 1 0 O 204433 Terriglobales 0.00 1 1 F 204434 Acidobacteriaceae 0.00 4 0 C 1813735 Vicinamibacteria 0.00 4 0 O 2910145 Vicinamibacterales 0.00 4 0 F 2211325 Vicinamibacteraceae 0.00 4 4 G 2004797 Luteitalea 0.00 1 0 C 533205 Holophagae 0.00 1 0 O 574975 Holophagales 0.00 1 0 F 574976 Holophagaceae 0.00 1 0 G 35838 Holophaga 0.00 1 0 G1 89282 environmental samples 0.00 1 1 S 188475 uncultured Holophaga sp. 0.00 5 0 P 2818505 Myxococcota 0.00 3 1 P1 3031711 Polyangia 0.00 1 0 O 3031712 Polyangiales 0.00 1 0 F 49 Polyangiaceae 0.00 1 1 G 39643 Sorangium 0.00 1 0 O 3031713 Nannocystales 0.00 1 0 F 224463 Nannocystaceae 0.00 1 0 G 53 Nannocystis 0.00 1 1 S 2995304 Nannocystis poenicansa 0.00 2 0 C 32015 Myxococcia 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 1 0 F 39 Archangiaceae 0.00 1 0 G 42 Cystobacter 0.00 1 1 S 43 Cystobacter fuscus 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 0 G 161492 Anaeromyxobacter 0.00 1 1 S 2918171 Anaeromyxobacter paludicola 0.00 5 0 P 200918 Thermotogota 0.00 5 0 C 188708 Thermotogae 0.00 5 0 O 1643947 Petrotogales 0.00 5 0 F 1643949 Petrotogaceae 0.00 5 0 G 1255275 Oceanotoga 0.00 5 0 G1 2618448 unclassified Oceanotoga 0.00 5 5 S 2984951 Oceanotoga sp. DSM 15011 0.00 5 0 P 508458 Synergistota 0.00 5 0 C 649775 Synergistia 0.00 5 0 O 649776 Synergistales 0.00 5 0 F 649777 Synergistaceae 0.00 5 0 G 508459 Cloacibacillus 0.00 5 5 S 1197717 Cloacibacillus porcorum 0.00 4 0 P 32066 Fusobacteriota 0.00 4 0 C 203490 Fusobacteriia 0.00 4 0 O 203491 Fusobacteriales 0.00 3 0 F 203492 Fusobacteriaceae 0.00 3 0 G 848 Fusobacterium 0.00 3 3 S 2764326 Fusobacterium hominis 0.00 1 0 F 1129771 Leptotrichiaceae 0.00 1 1 G 32067 Leptotrichia 0.00 1 0 P 1930617 Calditrichota 0.00 1 0 C 1962850 Calditrichia 0.00 1 0 O 1962852 Calditrichales 0.00 1 0 F 1962854 Calditrichaceae 0.00 1 0 G 187144 Caldithrix 0.00 1 0 S 187145 Caldithrix abyssi 0.00 1 1 S1 880073 Caldithrix abyssi DSM 13497 0.00 5 0 D 2157 Archaea 0.00 3 0 P 2283796 Candidatus Thermoplasmatota 0.00 3 0 C 183967 Thermoplasmata 0.00 3 0 O 1235850 Methanomassiliicoccales 0.00 3 2 F 1577788 Methanomassiliicoccaceae 0.00 1 0 G 1080709 Methanomassiliicoccus 0.00 1 1 S 1406512 Candidatus Methanomassiliicoccus intestinalis 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 224756 Methanomicrobia 0.00 1 0 O 2191 Methanomicrobiales 0.00 1 0 F 1198451 Methanoregulaceae 0.00 1 0 G 395331 Methanoregula 0.00 1 0 G1 511148 environmental samples 0.00 1 1 S 1005933 uncultured Methanoregula sp. 0.00 1 0 D1 1783275 TACK group 0.00 1 0 P 28889 Thermoproteota 0.00 1 0 C 183924 Thermoprotei 0.00 1 0 O 2281 Sulfolobales 0.00 1 0 F 118883 Sulfolobaceae 0.00 1 0 G 12914 Acidianus 0.00 1 0 S 563177 Acidianus hospitalis 0.00 1 1 S1 933801 Acidianus hospitalis W1