46.26 57023 57023 U 0 unclassified 53.74 66249 0 R 1 root 53.74 66249 3 R1 131567 cellular organisms 53.74 66245 4494 D 2 Bacteria 45.18 55691 24 P 1224 Pseudomonadota 42.40 52264 77 C 1236 Gammaproteobacteria 37.77 46560 1 O 72274 Pseudomonadales 37.77 46559 83 F 135621 Pseudomonadaceae 37.65 46416 42288 G 286 Pseudomonas 0.97 1201 218 G1 196821 unclassified Pseudomonas 0.22 268 268 S 2931382 Pseudomonas sp. PIA16 0.12 154 154 S 2954092 Pseudomonas sp. FP2335 0.08 94 94 S 2954097 Pseudomonas sp. FP603 0.05 64 64 S 2954080 Pseudomonas sp. FP1762 0.04 48 48 S 2895471 Pseudomonas sp. B21-010 0.03 36 36 S 2705472 Pseudomonas sp. MTM4 0.03 34 34 S 2954094 Pseudomonas sp. FP453 0.03 32 32 S 2954088 Pseudomonas sp. FP2262 0.02 30 30 S 1649877 Pseudomonas sp. CCOS 191 0.02 29 29 S 2976884 Pseudomonas sp. FJ2-5-13 0.02 26 26 S 2871095 Pseudomonas sp. DR48 0.02 24 24 S 3137451 Pseudomonas sp. G.S.17 0.02 23 23 S 2748080 Pseudomonas sp. ABC1 0.01 15 15 S 2559074 Pseudomonas sp. S150 0.01 14 14 S 2895472 Pseudomonas sp. B21-012 0.01 13 13 S 2921518 Pseudomonas sp. FSL L8-0168 0.01 12 12 S 2954078 Pseudomonas sp. FP1740 0.01 12 12 S 1500686 Pseudomonas sp. Os17 0.01 11 11 S 2944392 Pseudomonas sp. BYT-5 0.01 8 8 S 3035289 Pseudomonas sp. NyZ480 0.00 6 6 S 1357074 Pseudomonas sp. LS44 0.00 6 6 S 2762896 Pseudomonas sp. MPDS 0.00 5 5 S 2083051 Pseudomonas sp. SWI6 0.00 3 3 S 2018067 Pseudomonas sp. FDAARGOS_380 0.00 3 3 S 1207075 Pseudomonas sp. UW4 0.00 2 2 S 2954086 Pseudomonas sp. FP2196 0.00 2 2 S 1027966 Pseudomonas sp. HR96 0.00 2 2 S 1855380 Pseudomonas sp. Z003-0.4C(8344-21) 0.00 1 1 S 2954084 Pseudomonas sp. FP198 0.00 1 1 S 1702250 Pseudomonas sp. IB20 0.00 1 1 S 2498848 Pseudomonas sp. MPC6 0.00 1 1 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 2954096 Pseudomonas sp. FP597 0.00 1 1 S 2892442 Pseudomonas sp. CIP-10 0.00 1 1 S 2971912 Pseudomonas sp. CBS 0.83 1021 1 G1 136843 Pseudomonas fluorescens group 0.42 513 3 S 47883 Pseudomonas synxantha 0.41 510 510 S1 96901 Pseudomonas synxantha BG33R 0.23 287 287 S 47878 Pseudomonas azotoformans 0.09 108 108 S 183795 Pseudomonas mediterranea 0.04 46 46 S 200450 Pseudomonas trivialis 0.03 43 43 S 321662 Pseudomonas moraviensis 0.01 14 0 S 294 Pseudomonas fluorescens 0.01 14 14 S1 1038922 Pseudomonas fluorescens Q2-87 0.00 5 5 S 76761 Pseudomonas veronii 0.00 4 4 S 198620 Pseudomonas koreensis 0.49 609 14 G1 136845 Pseudomonas putida group 0.29 352 352 S 78327 Pseudomonas mosselii 0.20 243 243 S 303 Pseudomonas putida 0.30 373 0 G1 136841 Pseudomonas aeruginosa group 0.30 373 368 S 287 Pseudomonas aeruginosa 0.00 4 4 S1 1340851 Pseudomonas aeruginosa RP73 0.00 1 1 S1 381754 Pseudomonas aeruginosa PA7 0.16 203 203 S 46677 Pseudomonas agarici 0.14 178 178 S 2738125 Pseudomonas hefeiensis 0.13 162 0 G1 136842 Pseudomonas chlororaphis group 0.13 161 161 S 380021 Pseudomonas protegens 0.00 1 1 S 296 Pseudomonas fragi 0.06 77 0 G1 136849 Pseudomonas syringae group 0.06 77 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.06 77 3 S 317 Pseudomonas syringae 0.05 60 60 S1 1357285 Pseudomonas syringae CC457 0.01 14 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.01 14 14 S2 103796 Pseudomonas syringae pv. actinidiae 0.03 40 40 S 437900 Pseudomonas marincola 0.03 38 38 S 2954098 Pseudomonas wuhanensis 0.03 33 33 S 2853159 Pseudomonas pergaminensis 0.02 30 30 S 2599595 Pseudomonas eucalypticola 0.02 27 27 S 2894079 Pseudomonas oryziphila 0.02 26 26 S 1302376 Candidatus Pseudomonas adelgestsugas 0.02 20 20 S 1499686 Pseudomonas saudiphocaensis 0.01 18 18 S 930166 Pseudomonas brassicacearum 0.01 12 12 S 1198456 Pseudomonas guguanensis 0.01 11 11 S 321846 Pseudomonas simiae 0.01 10 10 S 2681983 Pseudomonas bijieensis 0.01 9 9 S 2842346 Pseudomonas siliginis 0.01 8 8 S 2219225 Pseudomonas asiatica 0.01 7 7 S 158627 Pseudomonas graminis 0.00 5 0 G1 62104 environmental samples 0.00 5 5 S 114707 uncultured Pseudomonas sp. 0.00 4 4 S 1853130 Pseudomonas silesiensis 0.00 2 2 S 3136738 Pseudomonas helvetica 0.00 1 1 S 2762576 Pseudomonas baltica 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.00 1 1 S 2995174 Pseudomonas quebecensis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.02 27 2 G 2758906 Entomomonas 0.01 18 0 G1 2785330 unclassified Entomomonas 0.01 18 18 S 2930213 Entomomonas sp. E2T0 0.00 6 6 S 2785331 Entomomonas asaccharolytica 0.00 1 1 S 2213226 Entomomonas moraniae 0.02 19 18 G 2901189 Halopseudomonas 0.00 1 1 S 797277 Halopseudomonas litoralis 0.01 7 0 G 2901164 Stutzerimonas 0.01 7 0 G1 136846 Stutzerimonas stutzeri group 0.00 6 6 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 3 0 F1 351 Azotobacter group 0.00 3 3 G 352 Azotobacter 0.00 3 0 G 1654787 Thiopseudomonas 0.00 3 3 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 G 2901261 Denitrificimonas 0.00 1 1 S 521720 Denitrificimonas caeni 4.16 5124 2 O 91347 Enterobacterales 4.05 4998 41 F 543 Enterobacteriaceae 3.81 4698 0 G 561 Escherichia 3.81 4696 4615 S 562 Escherichia coli 0.06 80 80 S1 316435 Escherichia coli Nissle 1917 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.00 2 2 S 564 Escherichia fergusonii 0.14 174 0 G 544 Citrobacter 0.14 172 172 S 2971264 Citrobacter enshiensis 0.00 2 0 G1 1344959 Citrobacter freundii complex 0.00 2 2 S 1639133 Citrobacter portucalensis 0.04 50 0 G 547 Enterobacter 0.04 50 0 G1 354276 Enterobacter cloacae complex 0.04 48 48 S 299767 Enterobacter ludwigii 0.00 2 2 S 158836 Enterobacter hormaechei 0.02 21 0 F1 2890311 Klebsiella/Raoultella group 0.02 21 0 G 570 Klebsiella 0.01 18 10 S 573 Klebsiella pneumoniae 0.01 8 7 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.00 2 2 S 548 Klebsiella aerogenes 0.00 1 1 S 244366 Klebsiella variicola 0.01 13 0 G 590 Salmonella 0.01 13 0 S 28901 Salmonella enterica 0.01 13 0 S1 59201 Salmonella enterica subsp. enterica 0.00 5 5 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 4 4 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 2 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 2 2 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 1 1 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 0 G 1330547 Kosakonia 0.00 1 1 S 208223 Kosakonia cowanii 0.05 58 39 F 1903411 Yersiniaceae 0.01 16 8 G 613 Serratia 0.00 6 6 S 61652 Serratia rubidaea 0.00 2 2 S 138074 Serratia symbiotica 0.00 2 0 G 629 Yersinia 0.00 2 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 2 0 S 632 Yersinia pestis 0.00 1 1 S1 748678 Yersinia pestis str. Pestoides B 0.00 1 1 S1 1035377 Yersinia pestis A1122 0.00 1 0 G 34037 Rahnella 0.00 1 1 S 1510570 Rahnella victoriana 0.04 48 4 F 1903414 Morganellaceae 0.03 36 15 G 586 Providencia 0.01 12 12 S 158850 Providencia rustigianii 0.01 8 0 S 516075 Providencia sneebia 0.01 8 8 S1 1141660 Providencia sneebia DSM 19967 0.00 1 0 G1 2633465 unclassified Providencia 0.00 1 1 S 2939731 Providencia sp. PROV188 0.00 6 0 G 581 Morganella 0.00 6 6 S 582 Morganella morganii 0.00 1 0 G 583 Proteus 0.00 1 1 S 584 Proteus mirabilis 0.00 1 0 G 637 Arsenophonus 0.00 1 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.01 10 0 F 2812006 Bruguierivoracaceae 0.01 10 0 G 84565 Sodalis 0.01 10 10 S 2697027 Sodalis ligni 0.00 6 0 F 1903409 Erwiniaceae 0.00 6 0 G 53335 Pantoea 0.00 6 0 G1 1654067 Pantoea agglomerans group 0.00 6 6 S 549 Pantoea agglomerans 0.00 2 0 F 1903412 Hafniaceae 0.00 1 0 G 568 Hafnia 0.00 1 1 S 569 Hafnia alvei 0.00 1 0 G 635 Edwardsiella 0.00 1 1 S 636 Edwardsiella tarda 0.26 324 0 O 135623 Vibrionales 0.26 324 1 F 641 Vibrionaceae 0.24 297 268 G 662 Vibrio 0.00 6 0 G1 717610 Vibrio harveyi group 0.00 3 3 S 669 Vibrio harveyi 0.00 2 0 G2 2315253 Vibrio diabolicus subgroup 0.00 2 2 S 50719 Vibrio diabolicus 0.00 1 1 S 670 Vibrio parahaemolyticus 0.00 5 5 S 28173 Vibrio nigripulchritudo 0.00 5 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2751179 Vibrio sp. B1REV9 0.00 1 1 S 2819100 Vibrio sp. SCSIO 43140 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2163016 Vibrio sp. dhg 0.00 3 3 S 666 Vibrio cholerae 0.00 2 2 S 676 Vibrio fluvialis 0.00 2 2 S 1824638 Vibrio japonicus 0.00 1 1 S 672 Vibrio vulnificus 0.00 1 1 S 55601 Vibrio anguillarum 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 28172 Vibrio metschnikovii 0.00 1 1 S 687 Vibrio gazogenes 0.00 1 1 S 184755 Vibrio ruber 0.02 22 17 G 51366 Salinivibrio 0.00 5 5 S 334715 Salinivibrio proteolyticus 0.00 4 0 G 657 Photobacterium 0.00 4 4 S 38293 Photobacterium damselae 0.05 58 0 O 135614 Lysobacterales 0.04 55 1 F 32033 Lysobacteraceae 0.03 41 0 G 338 Xanthomonas 0.03 41 41 S 29447 Xanthomonas albilineans 0.01 11 5 G 40323 Stenotrophomonas 0.00 3 3 S 128780 Stenotrophomonas acidaminiphila 0.00 2 0 G1 995085 Stenotrophomonas maltophilia group 0.00 2 2 S 40324 Stenotrophomonas maltophilia 0.00 1 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2691571 Stenotrophomonas sp. 364 0.00 2 1 G 68 Lysobacter 0.00 1 1 S 2763317 Lysobacter solisilvae 0.00 3 0 F 1775411 Rhodanobacteraceae 0.00 1 0 G 70411 Frateuria 0.00 1 1 S 2898793 Frateuria edaphi 0.00 1 0 G 231454 Dyella 0.00 1 0 G1 2634549 unclassified Dyella 0.00 1 1 S 3075430 Dyella sp. BiH032 0.00 1 0 G 242605 Luteibacter 0.00 1 1 S 2911539 Luteibacter aegosomatissinici 0.04 46 0 O 135619 Oceanospirillales 0.03 43 5 F 28256 Halomonadaceae 0.03 36 1 G 2745 Halomonas 0.03 35 35 G1 2609666 unclassified Halomonas 0.00 2 0 G 404432 Salinicola 0.00 2 2 S 1949083 Salinicola endophyticus 0.00 2 0 F 2823145 Pleioneaceae 0.00 2 0 G 1502941 Pleionea 0.00 2 2 S 3070815 Pleionea litopenaei 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.02 28 0 O 2887326 Moraxellales 0.02 28 0 F 468 Moraxellaceae 0.01 13 6 G 469 Acinetobacter 0.00 5 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 3 3 S 470 Acinetobacter baumannii 0.00 2 0 S 48296 Acinetobacter pittii 0.00 2 2 S1 871585 Acinetobacter pittii PHEA-2 0.00 1 1 S 756892 Acinetobacter indicus 0.00 1 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 1827285 Acinetobacter sp. MYb10 0.01 9 0 G 497 Psychrobacter 0.01 9 0 G1 196806 unclassified Psychrobacter 0.01 9 9 S 1415574 Psychrobacter sp. LV10R520-6 0.00 6 5 G 475 Moraxella 0.00 1 0 G1 2685852 unclassified Moraxella 0.00 1 1 S 2904123 Moraxella sp. ZY210820 0.01 14 0 O 135622 Alteromonadales 0.01 8 0 F 267888 Pseudoalteromonadaceae 0.01 8 7 G 53246 Pseudoalteromonas 0.00 1 1 S 2774154 Pseudoalteromonas ostreae 0.00 3 1 F 72275 Alteromonadaceae 0.00 1 0 G 1751872 Lacimicrobium 0.00 1 1 S 1526571 Lacimicrobium alkaliphilum 0.00 1 1 G 1858563 Alkalimarinus 0.00 2 1 F 267889 Colwelliaceae 0.00 1 1 G 1518149 Thalassotalea 0.00 1 0 F 267890 Shewanellaceae 0.00 1 0 G 22 Shewanella 0.00 1 1 S 62322 Shewanella baltica 0.01 11 0 O 135613 Chromatiales 0.01 7 1 F 1046 Chromatiaceae 0.00 2 2 G 85072 Allochromatium 0.00 2 0 G 2828366 Caldichromatium 0.00 2 2 S 2699430 Caldichromatium japonicum 0.00 1 0 G 85073 Thermochromatium 0.00 1 0 S 1050 Thermochromatium tepidum 0.00 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 1 0 G 2796146 Candidatus Nitrosacidococcus 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 4 0 F 72276 Ectothiorhodospiraceae 0.00 4 3 G 1335745 Spiribacter 0.00 1 0 G1 2629425 unclassified Spiribacter 0.00 1 1 S 2666185 Spiribacter sp. 2438 0.01 8 0 O 135625 Pasteurellales 0.01 8 0 F 712 Pasteurellaceae 0.01 8 0 G 724 Haemophilus 0.01 8 8 S 729 Haemophilus parainfluenzae 0.01 7 0 O 135624 Aeromonadales 0.01 7 1 F 84642 Aeromonadaceae 0.00 3 2 G 225143 Oceanisphaera 0.00 1 1 S 1903694 Oceanisphaera avium 0.00 2 1 G 642 Aeromonas 0.00 1 1 S 70856 Aeromonas popoffii 0.00 1 0 G 43947 Tolumonas 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 2 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 1 S 66969 Legionella waltersii 0.00 1 0 F 118968 Coxiellaceae 0.00 1 1 G 254245 Aquicella 0.00 2 0 O 1240482 Orbales 0.00 2 0 F 1240483 Orbaceae 0.00 2 0 G 1193503 Gilliamella 0.00 1 1 S 1196095 Gilliamella apicola 0.00 1 0 G1 2685620 unclassified Gilliamella 0.00 1 1 S 2817969 Gilliamella sp. B3022 0.00 1 0 O 72273 Thiotrichales 0.00 1 0 F 135616 Piscirickettsiaceae 0.00 1 1 G 933 Thiomicrospira 0.00 1 0 O 1934945 Immundisolibacterales 0.00 1 0 F 1934946 Immundisolibacteraceae 0.00 1 0 G 1934947 Immundisolibacter 0.00 1 1 S 1810504 Immundisolibacter cernigliae 0.00 1 0 O 1706369 Cellvibrionales 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 1 S 86173 Microbulbifer elongatus 2.26 2781 4 C 28211 Alphaproteobacteria 2.12 2616 847 O 766 Rickettsiales 1.43 1765 0 F 942 Anaplasmataceae 1.43 1760 0 F1 952 Wolbachieae 1.43 1760 1430 G 953 Wolbachia 0.24 296 83 G1 2640676 unclassified Wolbachia 0.07 82 82 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.02 25 25 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.01 12 12 S 3077922 Wolbachia endosymbiont (group A) of Ischnus inquisitorius 0.01 12 12 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.01 8 8 S 2742717 Wolbachia endosymbiont of Wiebesia pumilae 0.01 8 8 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.01 8 8 S 2954012 Wolbachia endosymbiont (group B) of Eucosma cana 0.00 6 6 S 3066174 Wolbachia endosymbiont (group A) of Ennomos erosarius 0.00 6 6 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.00 6 6 S 2954037 Wolbachia endosymbiont (group B) of Pammene fasciana 0.00 5 5 S 2954056 Wolbachia endosymbiont (group A) of Sicus ferrugineus 0.00 5 5 S 2954051 Wolbachia endosymbiont (group B) of Protocalliphora azurea 0.00 4 4 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.00 3 3 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.00 3 3 S 2953988 Wolbachia endosymbiont (group A) of Bombylius major 0.00 3 3 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.00 3 3 S 3066179 Wolbachia endosymbiont (group B) of Idaea biselata 0.00 2 2 S 3066148 Wolbachia endosymbiont (group A) of Myopa testacea 0.00 2 2 S 2953978 Wolbachia endosymbiont (group A) of Anomoia purmunda 0.00 2 2 S 2953975 Wolbachia endosymbiont (group A) of Andrena dorsata 0.00 2 2 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.00 1 1 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.00 1 1 S 3066201 Wolbachia endosymbiont (group A) of Lasioglossum fulvicorne 0.00 1 1 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.00 1 0 S 77038 Wolbachia endosymbiont of Drosophila simulans 0.00 1 1 S1 1236908 Wolbachia endosymbiont of Drosophila simulans wNo 0.00 1 1 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.00 1 1 S 80850 Wolbachia endosymbiont of Litomosoides sigmodontis 0.03 32 32 S 955 Wolbachia pipientis 0.00 2 2 S 1845000 Candidatus Wolbachia massiliensis 0.00 3 0 G 2883098 Candidatus Mesenet 0.00 3 0 G1 3066220 unclassified Candidatus Mesenet 0.00 3 3 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.00 1 1 G 768 Anaplasma 0.00 1 0 G 467749 Candidatus Neoehrlichia 0.00 1 1 S 89586 Neoehrlichia mikurensis 0.00 3 0 F 775 Rickettsiaceae 0.00 3 2 F1 33988 Rickettsieae 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.07 92 2 O 356 Hyphomicrobiales 0.04 47 4 F 41294 Nitrobacteraceae 0.03 43 1 G 374 Bradyrhizobium 0.03 42 0 G1 2631580 unclassified Bradyrhizobium 0.03 41 41 S 2590772 Bradyrhizobium sp. I71 0.00 1 1 S 114615 Bradyrhizobium sp. ORS 278 0.01 15 0 F 82115 Rhizobiaceae 0.01 15 3 F1 227290 Rhizobium/Agrobacterium group 0.01 11 0 G 357 Agrobacterium 0.01 7 0 G1 1183400 Agrobacterium tumefaciens complex 0.01 7 7 S 1176649 Agrobacterium fabrum 0.00 4 4 S 2792015 Agrobacterium leguminum 0.00 1 0 G 1525371 Neorhizobium 0.00 1 0 S 399 Neorhizobium galegae 0.00 1 0 S1 323656 Neorhizobium galegae bv. officinalis 0.00 1 1 S2 1028801 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 0.01 11 0 F 45401 Hyphomicrobiaceae 0.01 10 8 G 81 Hyphomicrobium 0.00 2 2 G1 2619925 unclassified Hyphomicrobium 0.00 1 0 G 1484898 Methyloceanibacter 0.00 1 0 G1 2617503 unclassified Methyloceanibacter 0.00 1 1 S 2170729 Methyloceanibacter sp. wino2 0.00 5 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 4 0 G 212791 Enhydrobacter 0.00 4 0 G1 2632691 unclassified Enhydrobacter 0.00 4 4 S 1894999 Enhydrobacter sp. 0.00 1 0 G 169055 Nordella 0.00 1 0 G1 2623691 unclassified Nordella 0.00 1 1 S 2712222 Nordella sp. HKS 07 0.00 5 0 F 2831106 Devosiaceae 0.00 5 4 G 46913 Devosia 0.00 1 0 G1 196773 unclassified Devosia 0.00 1 1 S 1736675 Devosia sp. A16 0.00 3 1 F 119045 Methylobacteriaceae 0.00 1 1 G 407 Methylobacterium 0.00 1 0 G 186650 Microvirga 0.00 1 0 G1 2617746 unclassified Microvirga 0.00 1 1 S 2807101 Microvirga sp. VF16 0.00 2 0 F 69277 Phyllobacteriaceae 0.00 2 2 G 245876 Nitratireductor 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.02 29 0 O 204441 Rhodospirillales 0.01 13 0 F 2844601 Stellaceae 0.01 13 0 G 93 Stella 0.01 13 13 S 94 Stella humosa 0.01 12 2 F 433 Acetobacteraceae 0.01 8 3 G 434 Acetobacter 0.00 5 0 G1 151157 Acetobacter subgen. Acetobacter 0.00 5 5 S 435 Acetobacter aceti 0.00 1 0 G 3027666 Aristophania 0.00 1 1 S 2697033 Aristophania vespae 0.00 1 0 G 512381 Acidisoma 0.00 1 0 G1 2634065 unclassified Acidisoma 0.00 1 1 S 3040935 Acidisoma sp. PAMC 29798 0.00 2 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 192 Azospirillum brasilense 0.00 1 0 G 1543704 Niveispirillum 0.00 1 1 S 1612173 Niveispirillum cyanobacteriorum 0.00 2 0 F 3031145 Novispirillaceae 0.00 2 0 G 1804663 Haematospirillum 0.00 2 2 S 1549855 Haematospirillum jordaniae 0.02 20 0 O 204455 Rhodobacterales 0.01 16 2 F 31989 Paracoccaceae 0.01 14 14 G 265 Paracoccus 0.00 4 0 F 2854170 Roseobacteraceae 0.00 4 0 G 2919626 Alloyangia 0.00 4 4 S 311180 Alloyangia pacifica 0.01 18 1 O 204457 Sphingomonadales 0.01 17 0 F 41297 Sphingomonadaceae 0.01 8 3 G 13687 Sphingomonas 0.00 3 3 S 298708 Sphingomonas kaistensis 0.00 1 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2653203 Sphingomonas sp. CL5.1 0.00 1 1 S 2872652 Sphingomonas nostoxanthinifaciens 0.01 7 2 G 165695 Sphingobium 0.00 4 0 G1 2611147 unclassified Sphingobium 0.00 4 4 S 627192 Sphingobium sp. SYK-6 0.00 1 1 S 13690 Sphingobium yanoikuyae 0.00 1 0 G 165696 Novosphingobium 0.00 1 0 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 3079861 Novosphingobium sp. ZN18A2 0.00 1 1 G 165697 Sphingopyxis 0.00 1 0 O 204458 Caulobacterales 0.00 1 0 F 76892 Caulobacteraceae 0.00 1 0 G 41275 Brevundimonas 0.00 1 0 G1 2622653 unclassified Brevundimonas 0.00 1 1 S 2560058 Brevundimonas sp. Bb-A 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 1 1 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.50 622 3 C 28216 Betaproteobacteria 0.40 492 3 O 80840 Burkholderiales 0.35 434 3 F 119060 Burkholderiaceae 0.23 283 277 G 48736 Ralstonia 0.00 5 0 G1 3116862 Ralstonia solanacearum species complex 0.00 5 5 S 305 Ralstonia solanacearum 0.00 1 0 G1 209769 unclassified Ralstonia 0.00 1 1 S 2880990 Ralstonia sp. RS650 0.11 141 16 G 106589 Cupriavidus 0.08 99 99 S 82633 Cupriavidus pauculus 0.02 24 24 S 164546 Cupriavidus taiwanensis 0.00 1 1 S 119219 Cupriavidus metallidurans 0.00 1 1 S 1040979 Cupriavidus neocaledonicus 0.00 5 0 G 47670 Lautropia 0.00 5 5 S 47671 Lautropia mirabilis 0.00 1 0 G 32008 Burkholderia 0.00 1 0 G1 111527 pseudomallei group 0.00 1 0 S 57975 Burkholderia thailandensis 0.00 1 1 S1 1249664 Burkholderia thailandensis 34 0.00 1 1 G 131079 Limnobacter 0.02 29 3 F 75682 Oxalobacteraceae 0.02 22 6 F1 2895353 Telluria group 0.01 14 9 G 149698 Massilia 0.00 5 0 G1 2609279 unclassified Massilia 0.00 5 5 S 2709303 Massilia sp. Se16.2.3 0.00 2 0 G 34069 Telluria 0.00 2 2 S 34071 Telluria mixta 0.00 3 0 G 846 Oxalobacter 0.00 3 3 S 933080 Oxalobacter vibrioformis 0.00 1 0 G 963 Herbaspirillum 0.00 1 1 S 863372 Herbaspirillum huttiense 0.01 17 0 F 80864 Comamonadaceae 0.01 8 3 G 283 Comamonas 0.00 5 5 S 2743470 Comamonas antarctica 0.00 3 2 G 28065 Rhodoferax 0.00 1 0 G1 2627954 unclassified Rhodoferax 0.00 1 1 S 2741720 Rhodoferax sp. BAB1 0.00 2 0 G 34072 Variovorax 0.00 2 2 G1 663243 unclassified Variovorax 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 0 G1 199682 environmental samples 0.00 1 1 S 199683 uncultured Hydrogenophaga sp. 0.00 1 1 G 80865 Delftia 0.00 5 0 F 995019 Sutterellaceae 0.00 3 0 G 40544 Sutterella 0.00 2 2 S 2494234 Sutterella megalosphaeroides 0.00 1 1 S 2584944 Sutterella faecalis 0.00 2 0 G 1918598 Turicimonas 0.00 2 2 S 1796652 Turicimonas muris 0.00 2 0 F 506 Alcaligenaceae 0.00 2 2 G 507 Alcaligenes 0.00 2 0 F 2975441 Sphaerotilaceae 0.00 2 1 G 93681 Roseateles 0.00 1 1 S 76731 Roseateles depolymerans 0.08 93 0 O 206351 Neisseriales 0.07 92 24 F 481 Neisseriaceae 0.04 55 29 G 482 Neisseria 0.02 21 0 G1 2623750 unclassified Neisseria 0.02 19 19 S 2972775 Neisseria sp. Marseille-Q5346 0.00 2 0 S 641148 Neisseria sp. oral taxon 014 0.00 2 2 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.00 3 3 S 28449 Neisseria subflava 0.00 2 2 S 607712 Neisseria shayeganii 0.01 7 2 G 299568 Uruburuella 0.00 5 5 S 252130 Uruburuella suis 0.00 3 0 G 32257 Kingella 0.00 3 3 S 502 Kingella denitrificans 0.00 1 0 G 59 Vitreoscilla 0.00 1 1 S 1689272 Vitreoscilla massiliensis 0.00 1 0 G 538 Eikenella 0.00 1 1 S 539 Eikenella corrodens 0.00 1 0 G 2898489 Paralysiella 0.00 1 1 S 2809020 Paralysiella testudinis 0.00 1 0 F 2897177 Chitinibacteraceae 0.00 1 0 G 885864 Jeongeupia 0.00 1 0 G1 2619593 unclassified Jeongeupia 0.00 1 1 S 1906741 Jeongeupia sp. USM3 0.03 31 0 O 32003 Nitrosomonadales 0.02 28 0 F 2008793 Sterolibacteriaceae 0.02 28 0 G 378210 Methyloversatilis 0.02 28 0 G1 2639971 unclassified Methyloversatilis 0.02 28 28 S 1842540 Methyloversatilis sp. RAC08 0.00 1 0 F 90627 Gallionellaceae 0.00 1 0 G 2249462 Ferrigenium 0.00 1 1 S 1682490 Ferrigenium kumadai 0.00 1 0 F 206379 Nitrosomonadaceae 0.00 1 0 G 914 Nitrosomonas 0.00 1 0 S 916 Nitrosomonas eutropha 0.00 1 1 S1 335283 Nitrosomonas eutropha C91 0.00 1 0 F 2803844 Usitatibacteraceae 0.00 1 0 G 2803845 Usitatibacter 0.00 1 1 S 2732487 Usitatibacter palustris 0.00 3 0 O 206389 Rhodocyclales 0.00 3 0 F 2008794 Zoogloeaceae 0.00 3 0 G 2891324 Pseudothauera 0.00 3 3 S 2184083 Pseudothauera hydrothermalis 2.24 2764 24 D1 1783272 Terrabacteria group 1.91 2354 9 P 1239 Bacillota 1.43 1758 29 C 186801 Clostridia 0.69 849 32 O 186802 Eubacteriales 0.46 567 28 F 216572 Oscillospiraceae 0.18 224 11 G 1263 Ruminococcus 0.12 147 147 S 1161942 Ruminococcus champanellensis 0.03 35 35 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.01 14 14 S 438033 Ruminococcus gauvreauii 0.01 8 0 S 1264 Ruminococcus albus 0.01 8 8 S1 697329 Ruminococcus albus 7 = DSM 20455 0.00 5 5 G1 2608920 unclassified Ruminococcus 0.00 4 4 S 2564099 Ruminococcus bovis 0.05 67 0 G 2172004 Lawsonibacter 0.05 67 67 S 2108523 Lawsonibacter asaccharolyticus 0.05 59 0 G 2842531 Solibaculum 0.05 59 59 S 2780922 Solibaculum mannosilyticum 0.03 31 0 G 2304687 Petroclostridium 0.03 31 0 G1 2619260 unclassified Petroclostridium 0.03 31 31 S 3045146 Petroclostridium sp. X23 0.02 29 14 G 35829 Acetivibrio 0.01 13 0 S 288965 Acetivibrio clariflavus 0.01 13 13 S1 720554 Acetivibrio clariflavus DSM 19732 0.00 2 2 S 1515 Acetivibrio thermocellus 0.02 23 20 G 216851 Faecalibacterium 0.00 3 3 S 853 Faecalibacterium prausnitzii 0.01 17 11 G 2892396 Vescimonas 0.00 4 4 S 2714355 Vescimonas coprocola 0.00 2 2 S 2714353 Vescimonas fastidiosa 0.01 16 0 G 459786 Oscillibacter 0.01 16 16 S 2763056 Oscillibacter hominis 0.01 14 0 G 2892397 Pusillibacter 0.01 14 14 S 2714358 Pusillibacter faecalis 0.01 12 0 G 244127 Anaerotruncus 0.01 12 12 S 169435 Anaerotruncus colihominis 0.01 12 0 G 2038676 Paludihabitans 0.01 12 0 G1 2644543 unclassified Paludihabitans 0.01 12 12 S 3070656 Paludicola sp. MB14-C6 0.01 11 0 G 1905344 Ruthenibacterium 0.01 11 11 S 1550024 Ruthenibacterium lactatiformans 0.01 11 0 G 946234 Flavonifractor 0.01 11 11 S 292800 Flavonifractor plautii 0.00 5 0 G 292632 Subdoligranulum 0.00 5 5 S 214851 Subdoligranulum variabile 0.00 2 1 G 2834348 Caproicibacterium 0.00 1 1 S 3030016 Caproicibacterium argilliputei 0.00 2 0 G 236752 Fastidiosipila 0.00 2 2 S 236753 Fastidiosipila sanguinis 0.00 1 0 G 1508657 Ruminiclostridium 0.00 1 0 S 29362 Ruminiclostridium papyrosolvens 0.00 1 1 S1 588581 Ruminiclostridium papyrosolvens DSM 2782 0.00 1 0 G 2304691 Thermoclostridium 0.00 1 1 S 1510 Thermoclostridium stercorarium 0.00 1 0 G 253238 Ethanoligenens 0.00 1 1 S 253239 Ethanoligenens harbinense 0.00 1 1 G 3079925 Amygdalobacter 0.08 94 0 O1 538999 Eubacteriales incertae sedis 0.06 77 0 G 1918454 Flintibacter 0.06 77 0 G1 2610894 unclassified Flintibacter 0.06 77 77 S 2610895 Flintibacter sp. KGMB00164 0.01 14 0 G 1392389 Intestinimonas 0.01 14 14 S 1297617 Intestinimonas butyriciproducens 0.00 2 0 G 1686313 Fenollaria 0.00 2 2 S 938288 Fenollaria massiliensis 0.00 1 0 G 2717089 Massilistercora 0.00 1 1 S 2086584 Massilistercora timonensis 0.06 76 7 F 31979 Clostridiaceae 0.03 41 5 G 1485 Clostridium 0.01 11 11 S 1529 Clostridium cadaveris 0.01 7 0 G1 2614128 unclassified Clostridium 0.00 5 5 S 97138 Clostridium sp. MD294 0.00 1 1 S 411486 Clostridium sp. M62/1 0.00 1 1 S 1042156 Clostridium sp. SY8519 0.00 4 4 S 1561 Clostridium baratii 0.00 4 4 S 1216932 Clostridium bornimense 0.00 3 3 S 182773 Clostridium isatidis 0.00 1 1 S 1520 Clostridium beijerinckii 0.00 1 1 S 94869 Clostridium gasigenes 0.00 1 1 S 29341 Clostridium argentinense 0.00 1 1 S 1502 Clostridium perfringens 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 1 S 1504 Clostridium septicum 0.00 1 1 S 1497 Clostridium formicaceticum 0.02 20 0 G 49082 Candidatus Arthromitus 0.02 20 20 G1 2638829 unclassified Candidatus Arthromitus 0.00 6 0 G 44258 Caloramator 0.00 6 0 G1 2629145 unclassified Caloramator 0.00 6 6 S 2576307 Caloramator sp. E03 0.00 2 0 G 1769729 Hathewaya 0.00 2 2 S 1498 Hathewaya histolytica 0.03 37 7 F 3085642 Butyricicoccaceae 0.02 27 0 G 1928820 Intestinibacillus 0.02 27 0 G1 2635293 unclassified Intestinibacillus 0.02 27 27 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 3 0 G 2048137 Agathobaculum 0.00 3 0 G1 2620324 unclassified Agathobaculum 0.00 3 3 S 3079302 Agathobaculum sp. NTUH-O15-33 0.01 11 2 F 3082771 Acutalibacteraceae 0.01 7 0 G 1918385 Acutalibacter 0.01 7 7 S 1796620 Acutalibacter muris 0.00 2 2 G 1738645 Caproiciproducens 0.01 9 0 F 2867375 Desulfallaceae 0.01 9 0 G 2867376 Desulfoscipio 0.01 9 0 S 102134 Desulfoscipio gibsoniae 0.01 9 9 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.01 8 0 F 186806 Eubacteriaceae 0.01 8 0 G 1730 Eubacterium 0.00 6 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 6 6 S 2841528 Eubacterium sp. MSJ-33 0.00 2 2 S 39496 Eubacterium ventriosum 0.00 5 0 F 3046368 Aristaeellaceae 0.00 5 3 G 3046369 Aristaeella 0.00 2 2 S 3046382 Aristaeella hokkaidonensis 0.00 4 0 F 31984 Heliobacteriaceae 0.00 4 0 G 79598 Heliorestis 0.00 4 4 S 356322 Heliorestis convoluta 0.00 2 0 F 2937909 Desulfitobacteriaceae 0.00 2 0 G 79206 Desulfosporosinus 0.00 2 0 S 79209 Desulfosporosinus meridiei 0.00 2 2 S1 768704 Desulfosporosinus meridiei DSM 13257 0.00 2 0 F 543349 Symbiobacteriaceae 0.00 1 0 G 2733 Symbiobacterium 0.00 1 0 S 2734 Symbiobacterium thermophilum 0.00 1 1 S1 292459 Symbiobacterium thermophilum IAM 14863 0.00 1 0 G 1006480 Caldinitratiruptor 0.00 1 1 S 671077 Caldinitratiruptor microaerophilus 0.00 2 0 F 186807 Peptococcaceae 0.00 1 0 G 2282742 Desulfofarcimen 0.00 1 0 S 58138 Desulfofarcimen acetoxidans 0.00 1 1 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.00 1 0 G 2924872 Acididesulfobacillus 0.00 1 1 S 1561005 Acididesulfobacillus acetoxydans 0.66 815 0 O 3085636 Lachnospirales 0.66 808 102 F 186803 Lachnospiraceae 0.07 87 0 G 1506553 Lachnoclostridium 0.04 51 51 S 1512 [Clostridium] symbiosum 0.01 14 14 S 89153 [Clostridium] hylemonae 0.01 11 11 S 29347 [Clostridium] scindens 0.01 7 0 S 66219 Lachnoclostridium phytofermentans 0.01 7 7 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 4 4 S 1871021 Lachnoclostridium phocaeense 0.07 83 8 G 207244 Anaerostipes 0.06 69 68 S 649756 Anaerostipes hadrus 0.00 1 1 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.00 4 4 S 1229621 Anaerostipes rhamnosivorans 0.00 2 0 G1 2635253 unclassified Anaerostipes 0.00 2 2 S 3036926 Anaerostipes sp. PC18 0.05 61 0 G 248744 Marvinbryantia 0.05 61 0 S 168384 Marvinbryantia formatexigens 0.05 61 61 S1 478749 Marvinbryantia formatexigens DSM 14469 0.05 59 28 G 841 Roseburia 0.02 20 20 S 301301 Roseburia hominis 0.01 9 0 G1 2637578 unclassified Roseburia 0.00 6 6 S 1261634 Roseburia sp. 499 0.00 3 3 S 1261635 Roseburia sp. 831b 0.00 2 2 S 166486 Roseburia intestinalis 0.04 48 16 G 2316020 Mediterraneibacter 0.01 18 1 S 33039 [Ruminococcus] torques 0.01 17 17 S1 657313 [Ruminococcus] torques L2-14 0.01 7 7 S 33038 Mediterraneibacter gnavus 0.01 7 0 S 46228 [Ruminococcus] lactaris 0.01 7 7 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.04 48 45 G 1843210 Anaerocolumna 0.00 1 1 S 433286 Anaerocolumna cellulosilytica 0.00 1 0 G1 2642604 unclassified Anaerocolumna 0.00 1 1 S 3081750 Anaerocolumna sp. AGMB13020 0.00 1 1 S 2696063 Anaerocolumna sedimenticola 0.04 44 30 G 572511 Blautia 0.01 9 0 S 40520 Blautia obeum 0.01 7 7 S1 657314 Blautia obeum A2-162 0.00 2 2 S1 411459 Blautia obeum ATCC 29174 0.00 3 0 G1 2648079 unclassified Blautia 0.00 3 3 S 2479767 Blautia sp. SC05B48 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 1 S 2779518 Blautia liquoris 0.03 37 0 G 3031933 Chordicoccus 0.03 37 37 S 2709410 Chordicoccus furentiruminis 0.03 37 0 G 2163168 Kineothrix 0.03 37 4 G1 2625420 unclassified Kineothrix 0.02 21 21 S 3123317 Kineothrix sp. IPX-CK 0.01 12 12 S 3070215 Kineothrix sp. MB12-C1 0.03 35 0 G 2944195 Qiania 0.03 35 35 S 2763669 Qiania dongpingensis 0.02 29 0 G 28050 Lachnospira 0.02 29 29 S 39485 Lachnospira eligens 0.02 22 4 G 2719231 Lacrimispora 0.01 16 0 G1 2719232 unclassified Lacrimispora 0.01 16 16 S 3151850 Lacrimispora sp. BS-2 0.00 2 2 S 384636 Lacrimispora xylanisolvens 0.02 19 0 G 2944193 Simiaoa 0.02 19 19 S 2763672 Simiaoa sunii 0.01 14 0 G 1769710 Sellimonas 0.01 14 14 S 1653434 Sellimonas intestinalis 0.01 13 9 G 830 Butyrivibrio 0.00 2 2 S 45851 Butyrivibrio crossotus 0.00 1 1 S 831 Butyrivibrio fibrisolvens 0.00 1 0 S 43305 Butyrivibrio proteoclasticus 0.00 1 1 S1 515622 Butyrivibrio proteoclasticus B316 0.01 10 0 G 2569097 Anaerobutyricum 0.01 10 10 S 39488 Anaerobutyricum hallii 0.01 9 0 G 1164882 Lachnoanaerobaculum 0.00 6 6 S 2490855 Lachnoanaerobaculum gingivalis 0.00 3 3 S 617123 Lachnoanaerobaculum umeaense 0.01 8 0 G 1766253 Agathobacter 0.01 8 8 S 39491 Agathobacter rectalis 0.01 8 0 G 1213720 Stomatobaculum 0.01 8 0 G1 2643635 unclassified Stomatobaculum 0.01 8 8 S 3059030 Stomatobaculum sp. F0698 0.01 8 5 G 33042 Coprococcus 0.00 3 3 S 116085 Coprococcus catus 0.00 5 1 G 2719313 Enterocloster 0.00 3 3 S 208479 Enterocloster bolteae 0.00 1 0 S 333367 Enterocloster asparagiformis 0.00 1 1 S1 518636 [Clostridium] asparagiforme DSM 15981 0.00 4 0 G 1506577 Tyzzerella 0.00 4 4 S 36835 [Clostridium] colinum 0.00 4 0 G 189330 Dorea 0.00 3 3 S 88431 Dorea longicatena 0.00 1 1 S 39486 Dorea formicigenerans 0.00 4 0 G 3076670 Claveliimonas 0.00 4 4 S 3028070 Claveliimonas bilis 0.00 4 0 G 46205 Pseudobutyrivibrio 0.00 4 4 S 185007 Pseudobutyrivibrio xylanivorans 0.00 2 0 G 1663717 Herbinix 0.00 2 2 S 1679721 Herbinix luporum 0.00 2 0 G 3088373 Chakrabartyella 0.00 2 2 S 2918914 Chakrabartyella piscis 0.00 1 0 G 2944198 Wansuia 0.00 1 1 S 2763667 Wansuia hejianensis 0.00 1 0 G 1649459 Hungatella 0.00 1 1 S 154046 Hungatella hathewayi 0.00 3 0 F 2603322 Vallitaleaceae 0.00 3 3 G 1348611 Vallitalea 0.00 2 0 F 3018741 Cellulosilyticaceae 0.00 2 2 G 698776 Cellulosilyticum 0.00 2 0 F 3118652 Anaerotignaceae 0.00 2 1 G 2039240 Anaerotignum 0.00 1 0 S 28446 Anaerotignum propionicum 0.00 1 1 S1 991789 Anaerotignum propionicum DSM 1682 0.04 48 0 O 3082720 Peptostreptococcales 0.04 46 18 F 186804 Peptostreptococcaceae 0.02 22 16 G 1501226 Romboutsia 0.00 6 0 G1 2626894 unclassified Romboutsia 0.00 6 6 S 2708053 Romboutsia sp. 13368 0.00 2 0 G 1505652 Terrisporobacter 0.00 2 2 S 1460447 Terrisporobacter petrolearius 0.00 2 0 G 1870884 Clostridioides 0.00 2 1 S 1496 Clostridioides difficile 0.00 1 1 S1 699033 Clostridioides difficile 2007855 0.00 1 0 G 1849822 Paraclostridium 0.00 1 1 S 1505 Paraclostridium sordellii 0.00 1 0 G 2743582 Peptacetobacter 0.00 1 1 S 89152 Peptacetobacter hiranonis 0.00 1 0 F 3030910 Anaerovoracaceae 0.00 1 0 G 1926556 Emergencia 0.00 1 0 G1 2642996 unclassified Emergencia 0.00 1 1 S 3114296 Emergencia sp. JLR.KK010 0.00 1 0 F 3118655 Filifactoraceae 0.00 1 0 G 44259 Filifactor 0.00 1 0 S 143361 Filifactor alocis 0.00 1 1 S1 546269 Filifactor alocis ATCC 35896 0.01 14 0 O 3082768 Christensenellales 0.01 14 0 F 990719 Christensenellaceae 0.01 14 10 G 990721 Christensenella 0.00 2 2 S 626937 Christensenella minuta 0.00 2 2 S 1805714 Christensenella massiliensis 0.00 2 0 O 53433 Halanaerobiales 0.00 2 0 F 53434 Halobacteroidaceae 0.00 2 0 G 28186 Acetohalobium 0.00 2 0 S 28187 Acetohalobium arabaticum 0.00 2 2 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 1 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 3051499 Aceticella 0.00 1 1 S 2755338 Aceticella autotrophica 0.41 501 4 C 91061 Bacilli 0.35 436 3 O 186826 Lactobacillales 0.14 173 0 F 1300 Streptococcaceae 0.14 172 122 G 1301 Streptococcus 0.01 16 16 S 1346 Streptococcus iniae 0.01 7 1 S 1308 Streptococcus thermophilus 0.00 5 5 S1 767463 Streptococcus thermophilus ND03 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.01 7 7 S 1314 Streptococcus pyogenes 0.00 6 6 S 1311 Streptococcus agalactiae 0.00 4 2 S 1313 Streptococcus pneumoniae 0.00 2 2 S1 1159083 Streptococcus pneumoniae PCS8235 0.00 4 4 S 68892 Streptococcus infantis 0.00 2 0 G1 119603 Streptococcus dysgalactiae group 0.00 2 2 S 1336 Streptococcus equi 0.00 1 1 S 1307 Streptococcus suis 0.00 1 0 G1 671232 Streptococcus anginosus group 0.00 1 1 S 1328 Streptococcus anginosus 0.00 1 1 S 1335 Streptococcus equinus 0.00 1 1 S 1341 Streptococcus ratti 0.00 1 0 G 1357 Lactococcus 0.00 1 1 S 1363 Lactococcus garvieae 0.13 164 6 F 33958 Lactobacillaceae 0.08 101 91 G 2767887 Ligilactobacillus 0.00 6 5 S 1624 Ligilactobacillus salivarius 0.00 1 1 S1 1194971 Ligilactobacillus salivarius str. Ren 0.00 3 3 S 762833 Ligilactobacillus faecis 0.00 1 1 S 89059 Ligilactobacillus acidipiscis 0.04 49 11 G 1578 Lactobacillus 0.02 25 25 S 508451 Lactobacillus taiwanensis 0.00 4 4 S 151781 Lactobacillus intestinalis 0.00 3 3 S 83683 Lactobacillus amylolyticus 0.00 2 2 S 1596 Lactobacillus gasseri 0.00 2 2 S 2107999 Lactobacillus paragasseri 0.00 1 1 S 1584 Lactobacillus delbrueckii 0.00 1 1 G1 2620435 unclassified Lactobacillus 0.00 3 1 G 2742598 Limosilactobacillus 0.00 1 1 S 1598 Limosilactobacillus reuteri 0.00 1 1 S 1633 Limosilactobacillus vaginalis 0.00 2 2 G 2767885 Latilactobacillus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.00 1 1 G 46255 Weissella 0.00 1 1 G 46254 Oenococcus 0.06 72 6 F 186827 Aerococcaceae 0.05 63 60 G 1375 Aerococcus 0.00 3 3 S 51665 Aerococcus urinaeequi 0.00 3 0 G 46123 Abiotrophia 0.00 3 3 S 46125 Abiotrophia defectiva 0.01 14 3 F 186828 Carnobacteriaceae 0.01 11 0 G 117563 Granulicatella 0.01 10 10 S 137732 Granulicatella elegans 0.00 1 1 S 46124 Granulicatella adiacens 0.01 10 0 F 81852 Enterococcaceae 0.01 10 0 G 1350 Enterococcus 0.01 10 9 S 1351 Enterococcus faecalis 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 0.05 61 2 O 1385 Bacillales 0.02 21 1 F 90964 Staphylococcaceae 0.01 16 2 G 1279 Staphylococcus 0.01 10 10 S 1280 Staphylococcus aureus 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 1 1 S 1283 Staphylococcus haemolyticus 0.00 1 1 S 28035 Staphylococcus lugdunensis 0.00 1 1 S 985002 Staphylococcus argenteus 0.00 4 4 G 2803850 Mammaliicoccus 0.02 20 0 F 186817 Bacillaceae 0.01 10 0 G 1386 Bacillus 0.01 7 0 G1 653685 Bacillus subtilis group 0.00 6 0 G2 1938374 Bacillus amyloliquefaciens group 0.00 5 5 S 492670 Bacillus velezensis 0.00 1 1 S 1390 Bacillus amyloliquefaciens 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.00 2 0 G1 86661 Bacillus cereus group 0.00 2 1 S 1428 Bacillus thuringiensis 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 1 1 S 1455 Bacillus badius 0.00 4 0 G 459532 Terribacillus 0.00 4 4 S 586416 Terribacillus aidingensis 0.00 2 0 G 2837506 Niallia 0.00 2 2 S 1397 Niallia circulans 0.00 2 0 G 2675232 Neobacillus 0.00 2 0 G1 2675272 unclassified Neobacillus 0.00 2 2 S 3070677 Neobacillus sp. PS3-12 0.00 1 0 G 182709 Oceanobacillus 0.00 1 1 S 545501 Oceanobacillus oncorhynchi 0.00 1 0 G 2800373 Priestia 0.00 1 0 S 1404 Priestia megaterium 0.00 1 1 S1 1006007 Priestia megaterium WSH-002 0.01 13 0 F 186818 Planococcaceae 0.01 13 11 G 1372 Planococcus 0.00 2 2 S 192421 Planococcus maritimus 0.00 2 0 F 186822 Paenibacillaceae 0.00 2 0 G 44249 Paenibacillus 0.00 1 0 S 1406 Paenibacillus polymyxa 0.00 1 1 S1 886882 Paenibacillus polymyxa SC2 0.00 1 0 G1 185978 unclassified Paenibacillus 0.00 1 1 S 2954525 Paenibacillus sp. FSL M8-0142 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 1 0 F 186824 Thermoactinomycetaceae 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 0.00 1 0 F 539738 Gemellaceae 0.00 1 1 G 1378 Gemella 0.05 65 0 C 526524 Erysipelotrichia 0.05 65 0 O 526525 Erysipelotrichales 0.03 41 0 F 128827 Erysipelotrichaceae 0.02 22 0 G 174708 Allobaculum 0.01 17 0 G1 2623473 unclassified Allobaculum 0.01 17 17 S 2853432 Allobaculum sp. Allo2 0.00 5 5 S 2834459 Allobaculum mucilyticum 0.01 17 0 G 1729679 Faecalibaculum 0.01 17 17 S 1702221 Faecalibaculum rodentium 0.00 2 0 G 2749267 Amedibacterium 0.00 2 2 S 2583452 Amedibacterium intestinale 0.01 14 0 F 2810280 Coprobacillaceae 0.01 12 2 G 3025755 Thomasclavelia 0.00 6 6 S 1547 Thomasclavelia ramosa 0.00 2 0 S 29348 Thomasclavelia spiroformis 0.00 2 2 S1 428126 Thomasclavelia spiroformis DSM 1552 0.00 2 0 G1 3025756 unclassified Thomasclavelia 0.00 2 2 S 1965571 Erysipelatoclostridium sp. An173 0.00 2 0 G 2943184 Tannockella 0.00 2 2 S 2899121 Tannockella kyphosi 0.01 10 0 F 2810281 Turicibacteraceae 0.01 10 3 G 191303 Turicibacter 0.01 7 7 S 154288 Turicibacter sanguinis 0.01 17 0 C 909932 Negativicutes 0.01 9 0 O 909929 Selenomonadales 0.01 9 0 F 1843491 Selenomonadaceae 0.00 6 0 G 970 Selenomonas 0.00 6 6 S 69823 Selenomonas sputigena 0.00 3 0 G 158846 Megamonas 0.00 3 3 S 437897 Megamonas funiformis 0.01 7 0 O 1843489 Veillonellales 0.01 7 0 F 31977 Veillonellaceae 0.01 7 3 G 29465 Veillonella 0.00 4 4 S 423477 Veillonella rogosae 0.00 1 0 O 1843488 Acidaminococcales 0.00 1 0 F 909930 Acidaminococcaceae 0.00 1 0 G 33024 Phascolarctobacterium 0.00 1 1 S 33025 Phascolarctobacterium faecium 0.00 3 0 C 1737404 Tissierellia 0.00 2 0 O 1737405 Tissierellales 0.00 2 0 F 1570339 Peptoniphilaceae 0.00 1 1 G 165779 Anaerococcus 0.00 1 0 G 543311 Parvimonas 0.00 1 1 S 33033 Parvimonas micra 0.00 1 0 C1 1737407 Tissierellia incertae sedis 0.00 1 0 G 1582879 Ezakiella 0.00 1 1 S 1852374 Ezakiella massiliensis 0.00 1 0 P1 84086 unclassified Bacillota 0.00 1 1 S 243899 endosymbiont 'TC1' of Trimyema compressum 0.30 372 1 P 201174 Actinomycetota 0.27 330 2 C 1760 Actinomycetes 0.11 134 0 O 85007 Mycobacteriales 0.10 126 2 F 1762 Mycobacteriaceae 0.06 75 0 G 1763 Mycobacterium 0.06 75 0 G1 77643 Mycobacterium tuberculosis complex 0.06 75 75 S 78331 Mycobacterium canetti 0.04 49 0 G 1866885 Mycolicibacterium 0.04 48 48 S 370524 Mycolicibacterium pallens 0.00 1 1 S 1431246 Mycolicibacterium anyangense 0.00 3 0 F 85025 Nocardiaceae 0.00 2 0 G 1817 Nocardia 0.00 1 1 S 2749991 Nocardia gipuzkoensis 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975993 Nocardia sp. NBC_00565 0.00 1 1 G 1827 Rhodococcus 0.00 3 0 F 85029 Dietziaceae 0.00 3 0 G 37914 Dietzia 0.00 3 3 G1 2617939 unclassified Dietzia 0.00 2 0 F 1653 Corynebacteriaceae 0.00 2 0 G 1716 Corynebacterium 0.00 1 1 S 44750 Corynebacterium auris 0.00 1 1 S 43768 Corynebacterium matruchotii 0.05 57 0 O 85004 Bifidobacteriales 0.05 57 0 F 31953 Bifidobacteriaceae 0.05 57 52 G 1678 Bifidobacterium 0.00 5 5 S 216816 Bifidobacterium longum 0.04 54 0 O 85011 Kitasatosporales 0.04 54 7 F 2062 Streptomycetaceae 0.04 47 2 G 1883 Streptomyces 0.03 38 2 G1 2593676 unclassified Streptomyces 0.03 32 32 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 1460244 Streptomyces sp. PCS3-D2 0.00 1 1 S 2903875 Streptomyces sp. NBC_01460 0.00 1 1 S 2944250 Streptomyces sp. M92 0.00 1 1 S 2975689 Streptomyces sp. NBC_00247 0.00 2 2 S 83291 Streptomyces armeniacus 0.00 1 1 S 249567 Streptomyces decoyicus 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.00 1 1 S 42234 Streptomyces acidiscabies 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 68274 Streptomyces tauricus 0.00 1 1 S 2878388 Streptomyces marincola 0.03 34 2 O 85006 Micrococcales 0.01 15 10 F 85023 Microbacteriaceae 0.00 4 0 G 33882 Microbacterium 0.00 3 3 S 370764 Microbacterium pygmaeum 0.00 1 0 G1 2609290 unclassified Microbacterium 0.00 1 1 S 1714373 Microbacterium sp. No. 7 0.00 1 0 F1 1655488 Luna cluster 0.00 1 0 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 1 G1 2617988 unclassified Aquiluna 0.01 14 9 F 1268 Micrococcaceae 0.00 3 1 G 32207 Rothia 0.00 2 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 2 2 S 3047030 Rothia sp. SD9660Na 0.00 1 0 G 1742990 Paeniglutamicibacter 0.00 1 0 G1 2639426 unclassified Paeniglutamicibacter 0.00 1 1 S 2853258 Paeniglutamicibacter sp. Y32M11 0.00 1 1 G 1742989 Glutamicibacter 0.00 2 0 F 2805426 Kytococcaceae 0.00 2 0 G 57499 Kytococcus 0.00 2 2 S 1276 Kytococcus sedentarius 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 1 G 1707 Cellulomonas 0.03 31 0 O 85009 Propionibacteriales 0.01 14 0 F 85015 Nocardioidaceae 0.01 14 0 G 1839 Nocardioides 0.01 13 13 S 2663857 Nocardioides marmotae 0.00 1 1 S 2712223 Nocardioides anomalus 0.01 13 0 F 31957 Propionibacteriaceae 0.01 9 0 G 1912216 Cutibacterium 0.01 9 9 S 1747 Cutibacterium acnes 0.00 3 0 G 1743 Propionibacterium 0.00 3 3 S 1744 Propionibacterium freudenreichii 0.00 1 0 G 29404 Microlunatus 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.00 4 0 F 2726069 Kribbellaceae 0.00 4 4 G 182639 Kribbella 0.01 8 0 O 85010 Pseudonocardiales 0.01 8 0 F 2070 Pseudonocardiaceae 0.00 5 0 G 1851 Saccharomonospora 0.00 5 0 S 1852 Saccharomonospora viridis 0.00 5 5 S1 471857 Saccharomonospora viridis DSM 43017 0.00 1 0 G 1847 Pseudonocardia 0.00 1 1 G1 2619320 unclassified Pseudonocardia 0.00 1 0 G 2071 Saccharothrix 0.00 1 0 G1 2593673 unclassified Saccharothrix 0.00 1 1 S 3231910 Saccharothrix sp. HUAS TT1 0.00 1 0 G 165301 Lentzea 0.00 1 1 G1 2643253 unclassified Lentzea 0.00 4 0 O 85008 Micromonosporales 0.00 4 3 F 28056 Micromonosporaceae 0.00 1 0 G 1873 Micromonospora 0.00 1 0 G1 2617518 unclassified Micromonospora 0.00 1 1 S 2742132 Verrucosispora sp. NA02020 0.00 3 0 O 2037 Actinomycetales 0.00 3 0 F 2049 Actinomycetaceae 0.00 1 1 G 1069494 Trueperella 0.00 1 0 G 2529408 Schaalia 0.00 1 1 S 131110 Schaalia radingae 0.00 1 0 G 2767318 Boudabousia 0.00 1 1 S 1912795 Boudabousia tangfeifanii 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 0 F 2162846 Candidatus Nanopelagicaceae 0.00 2 2 G 622681 Candidatus Planktophila 0.00 1 0 O 85014 Glycomycetales 0.00 1 0 F 85034 Glycomycetaceae 0.00 1 0 G 2838311 Natronoglycomyces 0.00 1 1 S 2811108 Natronoglycomyces albus 0.03 36 0 C 84998 Coriobacteriia 0.02 28 0 O 1643822 Eggerthellales 0.02 28 7 F 1643826 Eggerthellaceae 0.01 10 10 G 447020 Adlercreutzia 0.00 6 0 G 1981050 Phoenicibacter 0.00 6 6 S 1944646 Phoenicibacter congonensis 0.00 2 0 G 2981344 Xiamenia 0.00 2 2 S 2682776 Xiamenia xianingshaonis 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 0 G 644652 Gordonibacter 0.00 1 1 S 1335613 Gordonibacter urolithinfaciens 0.00 1 0 G 2815775 Berryella 0.00 1 1 S 2734634 Berryella wangjianweii 0.01 8 1 O 84999 Coriobacteriales 0.00 4 0 F 84107 Coriobacteriaceae 0.00 3 0 G 102106 Collinsella 0.00 2 2 S 147206 Collinsella stercoris 0.00 1 1 S 74426 Collinsella aerofaciens 0.00 1 0 G 33870 Coriobacterium 0.00 1 0 S 33871 Coriobacterium glomerans 0.00 1 1 S1 700015 Coriobacterium glomerans PW2 0.00 2 0 F 3153719 Kribbibacteriaceae 0.00 2 0 G 2995122 Leptogranulimonas 0.00 2 2 S 2894156 Leptogranulimonas caecicola 0.00 1 0 F 1643824 Atopobiaceae 0.00 1 0 G 2847307 Thermophilibacter 0.00 1 1 S 2779519 Thermophilibacter immobilis 0.00 3 0 C 84992 Acidimicrobiia 0.00 3 0 O 84993 Acidimicrobiales 0.00 3 0 F 633392 Iamiaceae 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.00 1 0 G 1648491 Aquihabitans 0.00 1 0 G1 2633173 unclassified Aquihabitans 0.00 1 1 S 2849779 Aquihabitans sp. G128 0.00 1 0 G 3075137 Dermatobacter 0.00 1 1 S 2884263 Dermatobacter hominis 0.00 2 0 C 1497346 Thermoleophilia 0.00 2 0 O 588673 Solirubrobacterales 0.00 2 0 F 2600303 Baekduiaceae 0.00 2 0 G 2600304 Baekduia 0.00 2 2 S 2997333 Baekduia alba 0.01 7 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.01 7 0 P 1117 Cyanobacteriota 0.01 7 0 C 3028117 Cyanophyceae 0.00 3 0 O 1890424 Synechococcales 0.00 3 0 F 1890426 Synechococcaceae 0.00 3 0 G 1129 Synechococcus 0.00 3 0 G1 2626047 unclassified Synechococcus 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 1 S 1353138 Synechococcus sp. CBW1006 0.00 1 1 S 1173263 Synechococcus sp. PCC 7502 0.00 2 0 O 3079744 Acaryochloridales 0.00 2 0 F 1890429 Acaryochloridaceae 0.00 2 0 G 155977 Acaryochloris 0.00 2 0 S 155978 Acaryochloris marina 0.00 2 2 S1 2762553 Acaryochloris marina S15 0.00 1 0 O 1161 Nostocales 0.00 1 0 F 1892263 Hapalosiphonaceae 0.00 1 0 G 1190 Fischerella 0.00 1 0 G1 494603 unclassified Fischerella 0.00 1 1 S 2597771 Fischerella sp. JS2 0.00 1 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1150 Oscillatoriales 0.00 1 0 O1 1892256 Oscillatoriales incertae sedis 0.00 1 0 G 2023214 Koinonema 0.00 1 0 G1 2781947 unclassified Koinonema 0.00 1 1 S 222819 [Phormidium] sp. ETS-05 0.00 4 0 P 200795 Chloroflexota 0.00 3 0 C 475962 Caldilineae 0.00 3 0 O 475963 Caldilineales 0.00 3 0 F 475964 Caldilineaceae 0.00 3 0 G 233191 Caldilinea 0.00 3 0 S 133453 Caldilinea aerophila 0.00 3 3 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 61434 Dehalococcoides 0.00 2 0 P 544448 Mycoplasmatota 0.00 2 0 C 31969 Mollicutes 0.00 1 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 1 G 2093 Mycoplasma 0.00 1 0 O 186329 Acholeplasmatales 0.00 1 0 F 2146 Acholeplasmataceae 0.00 1 0 G 2147 Acholeplasma 0.00 1 1 S 2148 Acholeplasma laidlawii 0.00 1 0 P 1297 Deinococcota 0.00 1 0 C 188787 Deinococci 0.00 1 0 O 118964 Deinococcales 0.00 1 0 F 183710 Deinococcaceae 0.00 1 1 G 1298 Deinococcus 1.54 1895 0 D1 1783270 FCB group 1.54 1895 0 D2 68336 Bacteroidota/Chlorobiota group 1.54 1893 3 P 976 Bacteroidota 1.33 1635 0 C 200643 Bacteroidia 1.33 1634 18 O 171549 Bacteroidales 0.69 856 31 F 2005473 Muribaculaceae 0.32 391 0 G 2518497 Paramuribaculum 0.32 391 391 S 2094151 Paramuribaculum intestinale 0.21 258 12 G 2518495 Duncaniella 0.11 141 141 S 2518971 Duncaniella dubosii 0.09 105 105 G1 2649562 unclassified Duncaniella 0.14 168 75 G 1918540 Muribaculum 0.04 52 52 S 1796646 Muribaculum intestinale 0.03 41 41 S 2530390 Muribaculum gordoncarteri 0.01 8 0 G 2815786 Sodaliphilus 0.01 8 8 S 2606626 Sodaliphilus pleomorphus 0.31 378 53 F 171552 Prevotellaceae 0.17 207 2 G 838 Prevotella 0.16 195 195 S 28128 Prevotella corporis 0.01 9 0 G1 2638335 unclassified Prevotella 0.00 4 4 S 2691580 Prevotella sp. Rep29 0.00 2 0 S 652716 Prevotella sp. oral taxon 299 0.00 2 2 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 2 2 S 2937774 Prevotella sp. E15-22 0.00 1 1 S 2913621 Prevotella sp. E9-3 0.00 1 1 S 28131 Prevotella intermedia 0.07 84 2 G 577309 Paraprevotella 0.07 82 82 S 454154 Paraprevotella clara 0.02 26 0 G 2974251 Segatella 0.02 21 20 S 165179 Segatella copri 0.00 1 1 S1 537011 Segatella copri DSM 18205 0.00 4 4 S 2518605 Segatella hominis 0.00 1 1 S 28135 Segatella oris 0.01 8 0 G 2884814 Pseudoprevotella 0.01 8 8 S 2133944 Pseudoprevotella muciniphila 0.15 180 0 F 171550 Rikenellaceae 0.13 162 27 G 239759 Alistipes 0.04 51 51 S 214856 Alistipes finegoldii 0.03 36 36 S 1288121 Alistipes senegalensis 0.02 24 24 S 2585119 Alistipes dispar 0.01 9 0 G1 538948 environmental samples 0.01 9 9 S 538949 uncultured Alistipes sp. 0.01 7 7 S 2585118 Alistipes communis 0.00 5 5 S 2364787 Alistipes megaguti 0.00 2 2 S 626932 Alistipes indistinctus 0.00 1 0 G1 2608932 unclassified Alistipes 0.00 1 1 S 2662363 Alistipes sp. dk3624 0.01 18 0 G 1647173 Acetobacteroides 0.01 18 0 G1 1760810 environmental samples 0.01 18 18 S 1760811 uncultured Acetobacteroides sp. 0.10 129 0 F 815 Bacteroidaceae 0.09 107 7 G 816 Bacteroides 0.05 57 57 S 820 Bacteroides uniformis 0.01 11 11 S 46506 Bacteroides stercoris 0.01 7 7 S 817 Bacteroides fragilis 0.00 6 6 S 28113 Bacteroides heparinolyticus 0.00 6 0 G1 2646097 unclassified Bacteroides 0.00 6 6 S 3117552 Bacteroides sp. MSB163 0.00 5 5 S 291645 Bacteroides nordii 0.00 4 0 S 290053 Bacteroides helcogenes 0.00 4 4 S1 693979 Bacteroides helcogenes P 36-108 0.00 2 2 S 28116 Bacteroides ovatus 0.00 1 1 S 47678 Bacteroides caccae 0.00 1 1 S 291644 Bacteroides salyersiae 0.02 22 0 G 909656 Phocaeicola 0.01 10 10 S 821 Phocaeicola vulgatus 0.01 8 8 S 357276 Phocaeicola dorei 0.00 2 0 S 376805 Phocaeicola salanitronis 0.00 2 2 S1 667015 Phocaeicola salanitronis DSM 18170 0.00 2 2 S 387090 Phocaeicola coprophilus 0.04 51 0 F 2005525 Tannerellaceae 0.04 51 22 G 375288 Parabacteroides 0.01 18 18 S 1217282 Parabacteroides faecis 0.01 7 7 S 46503 Parabacteroides merdae 0.00 3 0 G1 2649774 unclassified Parabacteroides 0.00 3 3 S 2951805 Parabacteroides sp. AD58 0.00 1 1 S 823 Parabacteroides distasonis 0.01 9 1 F 2005519 Barnesiellaceae 0.01 7 7 G 1348911 Coprobacter 0.00 1 0 G 397864 Barnesiella 0.00 1 0 G1 2645177 unclassified Barnesiella 0.00 1 1 S 1965590 Barnesiella sp. An22 0.01 7 0 F 171551 Porphyromonadaceae 0.01 7 0 G 836 Porphyromonas 0.01 7 0 G1 2645799 unclassified Porphyromonas 0.01 7 7 S 712435 Porphyromonas sp. oral taxon 275 0.00 3 0 F 2005520 Dysgonomonadaceae 0.00 2 1 G 294702 Proteiniphilum 0.00 1 1 S 1642647 Proteiniphilum saccharofermentans 0.00 1 0 G 156973 Dysgonomonas 0.00 1 1 S 45254 Dysgonomonas capnocytophagoides 0.00 2 0 F 1853231 Odoribacteraceae 0.00 2 0 G 283168 Odoribacter 0.00 2 2 S 28118 Odoribacter splanchnicus 0.00 1 0 F 2005523 Paludibacteraceae 0.00 1 0 G 346096 Paludibacter 0.00 1 0 S 185300 Paludibacter propionicigenes 0.00 1 1 S1 694427 Paludibacter propionicigenes WB4 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 0 F 558415 Marinilabiliaceae 0.00 1 0 G 1628153 Carboxylicivirga 0.00 1 0 G1 1628155 environmental samples 0.00 1 1 S 1628156 uncultured Carboxylicivirga sp. 0.18 222 0 C 117743 Flavobacteriia 0.18 222 12 O 200644 Flavobacteriales 0.15 180 0 F 2762318 Weeksellaceae 0.15 180 0 F1 2782232 Chryseobacterium group 0.15 180 117 G 59732 Chryseobacterium 0.05 59 59 S 2929799 Chryseobacterium oryzae 0.00 3 0 G1 2593645 unclassified Chryseobacterium 0.00 2 2 S 2713414 Chryseobacterium sp. POL2 0.00 1 1 S 3139392 Chryseobacterium sp. Chry.R1 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.02 30 3 F 49546 Flavobacteriaceae 0.02 24 0 G 216431 Croceibacter 0.02 24 24 S 313588 Croceibacter atlanticus 0.00 2 0 G 237 Flavobacterium 0.00 2 0 G1 196869 unclassified Flavobacterium 0.00 2 2 S 2775246 Flavobacterium sp. CS20 0.00 1 1 G 1016 Capnocytophaga 0.03 31 0 C 768503 Cytophagia 0.03 31 6 O 768507 Cytophagales 0.02 23 0 F 89373 Cytophagaceae 0.02 23 0 G 107 Spirosoma 0.02 23 23 S 2666025 Spirosoma endbachense 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 1 G 89966 Hymenobacter 0.00 1 0 F 2896860 Spirosomataceae 0.00 1 0 G 105 Runella 0.00 1 1 S 2259595 Runella rosea 0.00 1 0 C 117747 Sphingobacteriia 0.00 1 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 84567 Pedobacter 0.00 1 1 S 2789740 Pedobacter endophyticus 0.00 1 0 C 1937959 Saprospiria 0.00 1 0 O 1936988 Saprospirales 0.00 1 0 F 89374 Saprospiraceae 0.00 1 1 G 1007 Saprospira 0.00 2 0 P 1090 Chlorobiota 0.00 2 0 C 191410 Chlorobiia 0.00 2 0 O 191411 Chlorobiales 0.00 2 0 F 191412 Chlorobiaceae 0.00 2 0 G 1101 Prosthecochloris 0.00 2 0 G1 2632826 unclassified Prosthecochloris 0.00 2 2 S 1868325 Prosthecochloris sp. CIB 2401 1.03 1267 0 P 203691 Spirochaetota 1.03 1267 3 C 203692 Spirochaetia 1.03 1264 0 O 136 Spirochaetales 1.03 1264 0 F 2845253 Treponemataceae 1.03 1264 1249 G 157 Treponema 0.01 9 9 S 744515 Treponema ruminis 0.00 2 2 S 2787628 Treponema peruense 0.00 2 0 S 167 Treponema succinifaciens 0.00 2 2 S1 869209 Treponema succinifaciens DSM 2489 0.00 1 0 G1 2638727 unclassified Treponema 0.00 1 1 S 1539298 Treponema sp. OMZ 838 0.00 1 1 S 165 Treponema saccharophilum 0.07 83 0 P 200940 Thermodesulfobacteriota 0.06 78 0 C 3031449 Desulfovibrionia 0.06 78 0 O 213115 Desulfovibrionales 0.06 78 5 F 194924 Desulfovibrionaceae 0.03 40 6 G 872 Desulfovibrio 0.01 17 17 S 876 Desulfovibrio desulfuricans 0.01 14 14 S 1725232 Candidatus Desulfovibrio trichonymphae 0.00 1 1 S 901 Desulfovibrio piger 0.00 1 1 S 44742 Desulfovibrio fairfieldensis 0.00 1 0 G1 2593640 unclassified Desulfovibrio 0.00 1 1 S 631220 Desulfovibrio sp. G11 0.02 26 0 G 3126915 Taurinivorans 0.02 26 26 S 2787751 Taurinivorans muris 0.00 6 6 G 2794998 Maridesulfovibrio 0.00 1 0 G 2909705 Oleidesulfovibrio 0.00 1 0 S 58180 Oleidesulfovibrio alaskensis 0.00 1 1 S1 207559 Oleidesulfovibrio alaskensis G20 0.00 4 0 C 3031651 Desulfuromonadia 0.00 3 0 O 69541 Desulfuromonadales 0.00 3 0 F 213421 Desulfuromonadaceae 0.00 3 3 G 890 Desulfuromonas 0.00 1 0 O 3031668 Geobacterales 0.00 1 0 F 213422 Geobacteraceae 0.00 1 0 G 2883512 Citrifermentans 0.00 1 1 S 60035 Citrifermentans bremense 0.00 1 0 C 3031646 Desulfarculia 0.00 1 0 O 453227 Desulfarculales 0.00 1 0 F 453228 Desulfarculaceae 0.00 1 0 G 3093638 Desulfoferula 0.00 1 1 S 3058419 Desulfoferula mesophila 0.01 18 0 P 32066 Fusobacteriota 0.01 18 0 C 203490 Fusobacteriia 0.01 18 0 O 203491 Fusobacteriales 0.01 11 0 F 203492 Fusobacteriaceae 0.00 6 5 G 848 Fusobacterium 0.00 1 1 S 861 Fusobacterium ulcerans 0.00 5 0 G 180162 Cetobacterium 0.00 5 5 S 188913 Cetobacterium somerae 0.01 7 0 F 1129771 Leptotrichiaceae 0.00 6 3 G 32067 Leptotrichia 0.00 3 0 G1 2633022 unclassified Leptotrichia 0.00 3 3 S 712357 Leptotrichia sp. oral taxon 212 0.00 1 0 G 2755140 Pseudoleptotrichia 0.00 1 1 S 157692 Pseudoleptotrichia goodfellowii 0.01 11 0 D1 1783257 PVC group 0.01 7 0 P 74201 Verrucomicrobiota 0.01 7 0 C 203494 Verrucomicrobiia 0.01 7 0 O 48461 Verrucomicrobiales 0.01 7 0 F 1647988 Akkermansiaceae 0.01 7 3 G 239934 Akkermansia 0.00 4 4 S 239935 Akkermansia muciniphila 0.00 2 0 P 203682 Planctomycetota 0.00 2 0 C 203683 Planctomycetia 0.00 1 0 O 112 Planctomycetales 0.00 1 0 F 126 Planctomycetaceae 0.00 1 0 G 2714737 Alienimonas 0.00 1 1 S 2527989 Alienimonas californiensis 0.00 1 0 O 2691355 Gemmatales 0.00 1 0 F 1914233 Gemmataceae 0.00 1 0 G 113 Gemmata 0.00 1 1 S 114 Gemmata obscuriglobus 0.00 2 0 P 204428 Chlamydiota 0.00 2 1 C 204429 Chlamydiia 0.00 1 0 O 51291 Chlamydiales 0.00 1 0 F 809 Chlamydiaceae 0.00 1 0 F1 1113537 Chlamydia/Chlamydophila group 0.00 1 1 G 810 Chlamydia 0.01 8 0 P 29547 Campylobacterota 0.01 8 0 C 3031852 Epsilonproteobacteria 0.01 8 0 O 213849 Campylobacterales 0.00 6 0 F 72293 Helicobacteraceae 0.00 6 2 G 209 Helicobacter 0.00 2 2 S 76936 Helicobacter typhlonius 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 1 S 135569 Helicobacter apodemus 0.00 1 0 F 2771471 Sulfurimonadaceae 0.00 1 0 G 202746 Sulfurimonas 0.00 1 1 G1 2623549 unclassified Sulfurimonas 0.00 1 0 F 2808963 Arcobacteraceae 0.00 1 0 G 2321111 Aliarcobacter 0.00 1 1 S 28197 Aliarcobacter butzleri 0.01 7 0 P 57723 Acidobacteriota 0.00 4 0 C 1813735 Vicinamibacteria 0.00 4 0 O 2910145 Vicinamibacterales 0.00 4 0 F 2211325 Vicinamibacteraceae 0.00 4 4 G 2004797 Luteitalea 0.00 3 0 C 204432 Terriglobia 0.00 3 0 O 204433 Terriglobales 0.00 3 1 F 204434 Acidobacteriaceae 0.00 1 1 G 388463 Edaphobacter 0.00 1 0 G 392733 Terriglobus 0.00 1 1 S 1592106 Terriglobus albidus 0.00 3 0 P 2818505 Myxococcota 0.00 3 0 P1 3031711 Polyangia 0.00 3 0 O 3031712 Polyangiales 0.00 2 0 F 1055686 Sandaracinaceae 0.00 2 0 G 1055688 Sandaracinus 0.00 2 2 S 927083 Sandaracinus amylolyticus 0.00 1 0 F 1524216 Labilitrichaceae 0.00 1 0 G 1524217 Labilithrix 0.00 1 1 S 1391654 Labilithrix luteola 0.00 2 0 P 40117 Nitrospirota 0.00 2 0 C 203693 Nitrospiria 0.00 2 0 O 189778 Nitrospirales 0.00 2 0 F 189779 Nitrospiraceae 0.00 2 0 G 179 Leptospirillum 0.00 2 0 G1 655606 Leptospirillum sp. Group I 0.00 2 0 S 180 Leptospirillum ferrooxidans 0.00 2 2 S1 1162668 Leptospirillum ferrooxidans C2-3 0.00 1 0 P 74152 Elusimicrobiota 0.00 1 0 C 641853 Elusimicrobia 0.00 1 0 O 641854 Elusimicrobiales 0.00 1 0 F 641876 Elusimicrobiaceae 0.00 1 0 G 423604 Elusimicrobium 0.00 1 0 S 423605 Elusimicrobium minutum 0.00 1 1 S1 445932 Elusimicrobium minutum Pei191 0.00 1 0 P 508458 Synergistota 0.00 1 0 C 649775 Synergistia 0.00 1 0 O 649776 Synergistales 0.00 1 0 F 3029088 Dethiosulfovibrionaceae 0.00 1 0 G 47054 Dethiosulfovibrio 0.00 1 0 G1 114537 environmental samples 0.00 1 1 S 185448 uncultured Dethiosulfovibrio sp. 0.00 1 0 D 2157 Archaea 0.00 1 0 D1 1783275 TACK group 0.00 1 0 P 651137 Nitrososphaerota 0.00 1 0 C 1643678 Nitrososphaeria 0.00 1 0 O 1033996 Nitrososphaerales 0.00 1 0 F 1033997 Nitrososphaeraceae 0.00 1 1 G 1826864 Candidatus Nitrosocosmicus