16.05 13308 13308 U 0 unclassified 83.95 69583 0 R 1 root 83.95 69583 1 R1 131567 cellular organisms 83.94 69581 918 D 2 Bacteria 46.94 38912 13 D1 1783272 Terrabacteria group 43.93 36414 276 P 1239 Bacillota 40.88 33888 592 C 186801 Clostridia 18.50 15334 27 O 3085636 Lachnospirales 18.25 15128 1234 F 186803 Lachnospiraceae 6.32 5235 3335 G 572511 Blautia 1.92 1595 2 S 40520 Blautia obeum 1.07 889 889 S1 657314 Blautia obeum A2-162 0.85 704 704 S1 411459 Blautia obeum ATCC 29174 0.19 156 0 G1 2648079 unclassified Blautia 0.19 154 154 S 2479767 Blautia sp. SC05B48 0.00 2 2 S 2860051 Blautia sp. KLE_1732_HM_1032 0.09 73 0 S 53443 Blautia hydrogenotrophica 0.09 73 73 S1 476272 Blautia hydrogenotrophica DSM 10507 0.05 43 43 S 89014 Blautia luti 0.03 23 23 S 1912897 Blautia argi 0.01 6 6 S 2877527 Blautia parvula 0.00 4 4 S 2779518 Blautia liquoris 4.41 3656 0 G 1766253 Agathobacter 4.41 3656 3644 S 39491 Agathobacter rectalis 0.01 12 12 S1 515619 Agathobacter rectalis ATCC 33656 1.57 1304 977 G 841 Roseburia 0.24 197 197 S 301301 Roseburia hominis 0.15 125 0 G1 2637578 unclassified Roseburia 0.13 105 105 S 1261635 Roseburia sp. 831b 0.02 20 20 S 1261634 Roseburia sp. 499 0.01 5 5 S 166486 Roseburia intestinalis 1.09 907 249 G 2316020 Mediterraneibacter 0.72 600 1 S 33039 [Ruminococcus] torques 0.72 599 599 S1 657313 [Ruminococcus] torques L2-14 0.06 51 0 S 46228 [Ruminococcus] lactaris 0.06 51 51 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.01 7 6 S 33038 Mediterraneibacter gnavus 0.00 1 1 S1 411470 Mediterraneibacter gnavus ATCC 29149 0.93 773 0 G 189330 Dorea 0.85 704 704 S 88431 Dorea longicatena 0.08 69 69 S 39486 Dorea formicigenerans 0.74 610 0 G 2569097 Anaerobutyricum 0.74 610 610 S 39488 Anaerobutyricum hallii 0.43 357 91 G 33042 Coprococcus 0.15 128 128 S 116085 Coprococcus catus 0.13 104 104 S 410072 Coprococcus comes 0.04 34 0 G1 2684943 unclassified Coprococcus 0.04 34 34 S 751585 Coprococcus sp. ART55/1 0.31 261 9 G 207244 Anaerostipes 0.29 237 236 S 649756 Anaerostipes hadrus 0.00 1 1 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.01 11 0 G1 2635253 unclassified Anaerostipes 0.01 11 11 S 3036926 Anaerostipes sp. PC18 0.00 4 4 S 1229621 Anaerostipes rhamnosivorans 0.13 109 96 G 1843210 Anaerocolumna 0.01 12 0 G1 2642604 unclassified Anaerocolumna 0.01 10 10 S 3039116 Anaerocolumna sp. AGMB13025 0.00 2 2 S 3070997 Anaerocolumna sp. MB42-C2 0.00 1 1 S 433286 Anaerocolumna cellulosilytica 0.11 95 0 G 3024823 Anaeromicropila 0.11 95 95 S 2785025 Anaeromicropila herbilytica 0.10 86 0 G 2944193 Simiaoa 0.10 86 86 S 2763672 Simiaoa sunii 0.10 79 0 G 28050 Lachnospira 0.10 79 79 S 39485 Lachnospira eligens 0.09 78 0 G 3088373 Chakrabartyella 0.09 78 78 S 2918914 Chakrabartyella piscis 0.08 67 0 G 1506553 Lachnoclostridium 0.03 29 29 S 29347 [Clostridium] scindens 0.03 27 27 S 1512 [Clostridium] symbiosum 0.01 8 8 S 89153 [Clostridium] hylemonae 0.00 3 0 S 66219 Lachnoclostridium phytofermentans 0.00 3 3 S1 357809 Lachnoclostridium phytofermentans ISDg 0.06 50 0 G 1506577 Tyzzerella 0.06 50 50 S 36835 [Clostridium] colinum 0.04 36 0 G 248744 Marvinbryantia 0.04 36 0 S 168384 Marvinbryantia formatexigens 0.04 36 36 S1 478749 Marvinbryantia formatexigens DSM 14469 0.04 35 0 G 2163168 Kineothrix 0.04 35 0 G1 2625420 unclassified Kineothrix 0.03 25 25 S 3070215 Kineothrix sp. MB12-C1 0.01 10 10 S 3123317 Kineothrix sp. IPX-CK 0.04 32 7 G 1164882 Lachnoanaerobaculum 0.03 21 21 S 617123 Lachnoanaerobaculum umeaense 0.00 4 4 S 2490855 Lachnoanaerobaculum gingivalis 0.03 26 0 G 3031933 Chordicoccus 0.03 26 26 S 2709410 Chordicoccus furentiruminis 0.03 22 0 G 1769710 Sellimonas 0.03 22 22 S 1653434 Sellimonas intestinalis 0.02 20 6 G 830 Butyrivibrio 0.01 10 10 S 831 Butyrivibrio fibrisolvens 0.00 3 3 S 45851 Butyrivibrio crossotus 0.00 1 0 S 43305 Butyrivibrio proteoclasticus 0.00 1 1 S1 515622 Butyrivibrio proteoclasticus B316 0.02 18 14 G 2719231 Lacrimispora 0.00 4 4 S 384636 Lacrimispora xylanisolvens 0.01 11 0 G 1213720 Stomatobaculum 0.01 11 0 G1 2643635 unclassified Stomatobaculum 0.01 11 11 S 3059030 Stomatobaculum sp. F0698 0.01 5 1 G 2719313 Enterocloster 0.00 2 2 S 208479 Enterocloster bolteae 0.00 2 0 S 333367 Enterocloster asparagiformis 0.00 2 2 S1 518636 [Clostridium] asparagiforme DSM 15981 0.01 5 0 G 2997360 Anaeropeptidivorans 0.01 5 5 S 2934315 Anaeropeptidivorans aminofermentans 0.01 5 0 G 2944195 Qiania 0.01 5 5 S 2763669 Qiania dongpingensis 0.00 4 0 G 3076670 Claveliimonas 0.00 4 4 S 3028070 Claveliimonas bilis 0.00 2 0 G 46205 Pseudobutyrivibrio 0.00 2 2 S 185007 Pseudobutyrivibrio xylanivorans 0.00 2 0 G 2944198 Wansuia 0.00 2 2 S 2763667 Wansuia hejianensis 0.00 2 0 G 1649459 Hungatella 0.00 2 2 S 154046 Hungatella hathewayi 0.00 1 0 G 2383 Candidatus Epulonipiscium 0.00 1 1 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 G 1663717 Herbinix 0.00 1 1 S 1679721 Herbinix luporum 0.18 149 3 F 2603322 Vallitaleaceae 0.17 145 0 G 2603323 Petrocella 0.17 145 145 S 2173034 Petrocella atlantisensis 0.00 1 1 G 1348611 Vallitalea 0.02 14 0 F 3018741 Cellulosilyticaceae 0.02 14 14 G 698776 Cellulosilyticum 0.01 10 0 F 3118652 Anaerotignaceae 0.01 10 0 G 2039240 Anaerotignum 0.01 10 0 S 28446 Anaerotignum propionicum 0.01 10 10 S1 991789 Anaerotignum propionicum DSM 1682 0.01 6 0 F 1185407 Defluviitaleaceae 0.01 6 0 G 1185408 Defluviitalea 0.01 6 6 S 879970 Defluviitalea saccharophila 18.29 15160 191 O 186802 Eubacteriales 15.28 12668 303 F 216572 Oscillospiraceae 6.60 5472 119 G 1263 Ruminococcus 5.14 4260 4260 G1 2608920 unclassified Ruminococcus 0.67 559 559 S 2564099 Ruminococcus bovis 0.53 438 438 S 1161942 Ruminococcus champanellensis 0.10 86 86 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.01 10 10 S 438033 Ruminococcus gauvreauii 5.54 4593 3831 G 216851 Faecalibacterium 0.88 726 726 S 853 Faecalibacterium prausnitzii 0.03 24 24 S 3030638 Faecalibacterium taiwanense 0.01 9 9 S 411483 Faecalibacterium duncaniae 0.00 3 0 G1 2646395 unclassified Faecalibacterium 0.00 3 3 S 2929493 Faecalibacterium sp. I3-3-89 1.53 1267 576 G 292632 Subdoligranulum 0.69 569 569 S 214851 Subdoligranulum variabile 0.15 122 0 G1 512297 environmental samples 0.15 122 122 S 512298 uncultured Subdoligranulum sp. 0.90 743 0 G 2842531 Solibaculum 0.90 743 743 S 2780922 Solibaculum mannosilyticum 0.16 132 94 G 2892396 Vescimonas 0.04 35 35 S 2714353 Vescimonas fastidiosa 0.00 3 3 S 2714355 Vescimonas coprocola 0.06 46 0 G 2038676 Paludihabitans 0.06 46 0 G1 2644543 unclassified Paludihabitans 0.06 46 46 S 3070656 Paludicola sp. MB14-C6 0.04 35 0 G 2304687 Petroclostridium 0.04 35 0 G1 2619260 unclassified Petroclostridium 0.04 35 35 S 3045146 Petroclostridium sp. X23 0.02 19 1 G 35829 Acetivibrio 0.02 15 15 S 1677857 Acetivibrio saccincola 0.00 3 0 S 288965 Acetivibrio clariflavus 0.00 3 3 S1 720554 Acetivibrio clariflavus DSM 19732 0.02 17 0 G 2172004 Lawsonibacter 0.02 17 17 S 2108523 Lawsonibacter asaccharolyticus 0.01 11 0 G 1905344 Ruthenibacterium 0.01 11 11 S 1550024 Ruthenibacterium lactatiformans 0.01 8 0 G 459786 Oscillibacter 0.01 8 8 S 2763056 Oscillibacter hominis 0.00 4 0 G 946234 Flavonifractor 0.00 4 4 S 292800 Flavonifractor plautii 0.00 4 0 G 2834348 Caproicibacterium 0.00 2 2 S 2666138 Caproicibacterium lactatifermentans 0.00 1 1 S 2766537 Caproicibacterium amylolyticum 0.00 1 0 G1 2834349 unclassified Caproicibacterium 0.00 1 1 S 2994078 Caproicibacterium sp. BJN0003 0.00 4 0 G 2892397 Pusillibacter 0.00 4 4 S 2714358 Pusillibacter faecalis 0.00 4 0 G 3048127 Thermocaproicibacter 0.00 4 4 S 2966552 Thermocaproicibacter melissae 0.00 3 0 G 244127 Anaerotruncus 0.00 3 3 S 169435 Anaerotruncus colihominis 0.00 2 0 G 1637257 Mageeibacillus 0.00 2 0 S 884684 Mageeibacillus indolicus 0.00 2 2 S1 699246 Mageeibacillus indolicus UPII9-5 0.00 1 0 G 253238 Ethanoligenens 0.00 1 1 S 253239 Ethanoligenens harbinense 1.68 1393 40 F 31979 Clostridiaceae 1.57 1303 178 G 1485 Clostridium 0.78 647 647 S 1529 Clostridium cadaveris 0.29 239 239 S 46867 Clostridium chauvoei 0.06 48 47 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.05 43 42 S 1502 Clostridium perfringens 0.00 1 1 S1 451751 Clostridium perfringens B 0.05 38 18 S 1520 Clostridium beijerinckii 0.02 20 20 S1 1428454 Clostridium beijerinckii NRRL B-598 0.04 35 0 G1 2614128 unclassified Clostridium 0.02 13 13 S 1042156 Clostridium sp. SY8519 0.01 7 7 S 97138 Clostridium sp. MD294 0.01 7 7 S 2930219 Clostridium sp. BJN0001 0.00 4 4 S 2483110 Clostridium sp. JN-1 0.00 2 2 S 2507159 Clostridium sp. JN-9 0.00 1 1 S 411486 Clostridium sp. M62/1 0.00 1 1 S 3070681 Clostridium sp. OS1-26 0.01 12 12 S 1491 Clostridium botulinum 0.01 12 12 S 1216932 Clostridium bornimense 0.01 10 10 S 84032 Clostridium thermosuccinogenes 0.01 9 9 S 182773 Clostridium isatidis 0.01 9 9 S 1534 Clostridium kluyveri 0.01 8 0 S 1493 Clostridium cellulovorans 0.01 8 8 S1 573061 Clostridium cellulovorans 743B 0.01 5 5 S 1504 Clostridium septicum 0.01 5 5 S 29341 Clostridium argentinense 0.00 2 2 S 94869 Clostridium gasigenes 0.00 2 2 S 2068654 Clostridium fermenticellae 0.00 1 1 S 36845 Clostridium intestinale 0.06 48 0 G 1266 Sarcina 0.06 48 0 G1 2619470 unclassified Sarcina 0.06 48 48 S 2726954 Sarcina sp. JB2 0.00 1 0 G 1434026 Oceanirhabdus 0.00 1 0 G1 2675010 unclassified Oceanirhabdus 0.00 1 1 S 2999116 Oceanirhabdus sp. W0125-5 0.00 1 0 G 1769729 Hathewaya 0.00 1 1 S 1498 Hathewaya histolytica 0.65 542 0 F 3046368 Aristaeellaceae 0.65 542 73 G 3046369 Aristaeella 0.56 468 468 S 3046382 Aristaeella hokkaidonensis 0.00 1 1 S 3046383 Aristaeella lactis 0.24 198 14 F 3085642 Butyricicoccaceae 0.21 176 0 G 1928820 Intestinibacillus 0.21 176 0 G1 2635293 unclassified Intestinibacillus 0.21 176 176 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.01 8 0 G 2048137 Agathobaculum 0.01 8 0 G1 2620324 unclassified Agathobaculum 0.01 8 8 S 3079302 Agathobaculum sp. NTUH-O15-33 0.09 77 0 F 186806 Eubacteriaceae 0.09 75 0 G 1730 Eubacterium 0.09 74 74 S 39496 Eubacterium ventriosum 0.00 1 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 1 1 S 2841528 Eubacterium sp. MSJ-33 0.00 2 2 G 33951 Acetobacterium 0.07 57 0 O1 538999 Eubacteriales incertae sedis 0.04 33 0 G 1918454 Flintibacter 0.04 33 0 G1 2610894 unclassified Flintibacter 0.04 33 33 S 2610895 Flintibacter sp. KGMB00164 0.02 19 0 G 415014 Proteiniborus 0.02 19 0 G1 2622907 unclassified Proteiniborus 0.02 19 19 S 3050072 Proteiniborus sp. MB09-C3 0.00 2 0 G 1392389 Intestinimonas 0.00 2 2 S 1297617 Intestinimonas butyriciproducens 0.00 1 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 1 0 G 2886866 Sinanaerobacter 0.00 1 0 G1 2886867 unclassified Sinanaerobacter 0.00 1 1 S 3111540 Sinanaerobacter sp. ZZT-01 0.00 1 1 G 1686313 Fenollaria 0.00 1 0 G 2717089 Massilistercora 0.00 1 1 S 2086584 Massilistercora timonensis 0.02 13 0 F 186807 Peptococcaceae 0.01 11 0 G 2840454 Candidatus Formimonas 0.01 11 11 S 1761012 Candidatus Formimonas warabiya 0.00 2 0 G 2916693 Desulforamulus 0.00 1 0 S 59610 Desulforamulus reducens 0.00 1 1 S1 349161 Desulforamulus reducens MI-1 0.00 1 1 S 1833852 Desulforamulus ferrireducens 0.02 13 6 F 3082771 Acutalibacteraceae 0.01 5 1 G 1738645 Caproiciproducens 0.00 4 0 G1 2643836 unclassified Caproiciproducens 0.00 4 4 S 3030017 Caproiciproducens sp. CPB-2 0.00 2 0 G 1918385 Acutalibacter 0.00 2 2 S 1796620 Acutalibacter muris 0.00 4 0 F 2937910 Desulfotomaculaceae 0.00 4 0 G 1562 Desulfotomaculum 0.00 4 0 S 1565 Desulfotomaculum nigrificans 0.00 4 4 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 3 0 F 2867375 Desulfallaceae 0.00 3 0 G 2867376 Desulfoscipio 0.00 3 0 S 102134 Desulfoscipio gibsoniae 0.00 3 3 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 1 0 F 31984 Heliobacteriaceae 0.00 1 0 G 2831443 Heliomicrobium 0.00 1 0 S 35701 Heliomicrobium modesticaldum 0.00 1 1 S1 498761 Heliomicrobium modesticaldum Ice1 3.36 2785 2 O 3082720 Peptostreptococcales 3.33 2760 989 F 186804 Peptostreptococcaceae 1.34 1113 198 G 1505652 Terrisporobacter 1.10 914 914 S 1460447 Terrisporobacter petrolearius 0.00 1 1 S 2813371 Terrisporobacter hibernicus 0.51 421 0 G 1505657 Intestinibacter 0.51 421 421 S 261299 Intestinibacter bartlettii 0.19 157 22 G 1501226 Romboutsia 0.15 128 0 G1 2626894 unclassified Romboutsia 0.15 128 128 S 2708053 Romboutsia sp. 13368 0.00 4 4 S 1507512 Romboutsia hominis 0.00 3 3 S 1115758 Romboutsia ilealis 0.05 45 0 G 1870884 Clostridioides 0.05 45 39 S 1496 Clostridioides difficile 0.01 5 5 S1 699033 Clostridioides difficile 2007855 0.00 1 1 S1 479832 Clostridioides difficile QCD-76w55 0.03 24 0 G 1849822 Paraclostridium 0.03 24 24 S 1505 Paraclostridium sordellii 0.01 7 0 G 1257 Peptostreptococcus 0.01 7 7 S 3003601 Peptostreptococcus equinus 0.00 3 0 G 214904 Tepidibacter 0.00 3 3 S 3036126 Tepidibacter hydrothermalis 0.00 1 0 G 2743582 Peptacetobacter 0.00 1 1 S 89152 Peptacetobacter hiranonis 0.01 12 3 F 3030910 Anaerovoracaceae 0.00 4 2 G 2060094 Aminipila 0.00 2 2 S 2507160 Aminipila luticellarii 0.00 3 0 G 1926556 Emergencia 0.00 2 0 G1 2642996 unclassified Emergencia 0.00 2 2 S 3114296 Emergencia sp. JLR.KK010 0.00 1 1 S 1776384 Emergencia timonensis 0.00 2 2 G 86331 Mogibacterium 0.01 11 0 F 3118656 Natronincolaceae 0.01 9 0 G 114627 Alkaliphilus 0.01 6 0 G1 2646756 unclassified Alkaliphilus 0.01 6 6 S 2731219 Alkaliphilus sp. B6464 0.00 2 0 S 461876 Alkaliphilus oremlandii 0.00 2 2 S1 350688 Alkaliphilus oremlandii OhILAs 0.00 1 0 S 208226 Alkaliphilus metalliredigens 0.00 1 1 S1 293826 Alkaliphilus metalliredigens QYMF 0.00 2 0 G 1890059 Serpentinicella 0.00 2 2 S 1734049 Serpentinicella alkaliphila 0.01 8 0 O 68295 Thermoanaerobacterales 0.01 6 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.01 6 0 G 252965 Mahella 0.01 6 0 S 252966 Mahella australiensis 0.01 6 6 S1 697281 Mahella australiensis 50-1 BON 0.00 2 1 F 186814 Thermoanaerobacteraceae 0.00 1 1 G 28895 Thermoanaerobacterium 0.01 5 0 O 53433 Halanaerobiales 0.00 3 0 F 53434 Halobacteroidaceae 0.00 2 0 G 42417 Halobacteroides 0.00 2 0 S 42422 Halobacteroides halobius 0.00 2 2 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 2 2 F 972 Halanaerobiaceae 0.00 3 0 O 3082768 Christensenellales 0.00 3 0 F 990719 Christensenellaceae 0.00 3 0 G 990721 Christensenella 0.00 3 3 S 1805714 Christensenella massiliensis 0.00 1 0 O 2770089 Thermosediminibacterales 0.00 1 0 F 2770092 Tepidanaerobacteraceae 0.00 1 0 G 499228 Tepidanaerobacter 0.00 1 0 S 499229 Tepidanaerobacter acetatoxydans 0.00 1 1 S1 1209989 Tepidanaerobacter acetatoxydans Re1 1.79 1485 9 C 91061 Bacilli 1.67 1388 7 O 186826 Lactobacillales 1.39 1156 9 F 33958 Lactobacillaceae 1.32 1097 916 G 2767887 Ligilactobacillus 0.16 136 1 S 1622 Ligilactobacillus murinus 0.16 135 135 S1 1235801 Ligilactobacillus murinus ASF361 0.04 34 30 S 1624 Ligilactobacillus salivarius 0.00 4 4 S1 1194971 Ligilactobacillus salivarius str. Ren 0.01 6 5 S 1623 Ligilactobacillus ruminis 0.00 1 1 S1 1069534 Ligilactobacillus ruminis ATCC 27782 0.00 2 2 S 1605 Ligilactobacillus animalis 0.00 1 1 S 1606 Ligilactobacillus aviarius 0.00 1 1 S 89059 Ligilactobacillus acidipiscis 0.00 1 1 S 762833 Ligilactobacillus faecis 0.04 31 17 G 1578 Lactobacillus 0.01 8 8 S 1579 Lactobacillus acidophilus 0.00 2 2 S 151781 Lactobacillus intestinalis 0.00 1 1 S 1584 Lactobacillus delbrueckii 0.00 1 1 S 1596 Lactobacillus gasseri 0.00 1 1 S 508451 Lactobacillus taiwanensis 0.00 1 1 S 303541 Lactobacillus apis 0.01 9 9 G 46255 Weissella 0.00 3 3 G 1243 Leuconostoc 0.00 3 0 G 2759736 Lacticaseibacillus 0.00 3 3 S 47715 Lacticaseibacillus rhamnosus 0.00 3 0 G 2767890 Paucilactobacillus 0.00 3 3 S 152335 Paucilactobacillus suebicus 0.00 1 0 G 2742598 Limosilactobacillus 0.00 1 1 S 1598 Limosilactobacillus reuteri 0.11 89 89 F 186828 Carnobacteriaceae 0.08 70 0 F 81852 Enterococcaceae 0.08 69 17 G 1350 Enterococcus 0.06 52 51 S 1351 Enterococcus faecalis 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 0.00 1 1 G 2737 Vagococcus 0.08 64 2 F 1300 Streptococcaceae 0.07 61 40 G 1301 Streptococcus 0.01 10 9 S 1311 Streptococcus agalactiae 0.00 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 3 3 S 1346 Streptococcus iniae 0.00 3 0 S 1308 Streptococcus thermophilus 0.00 2 2 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 767463 Streptococcus thermophilus ND03 0.00 2 2 S 1314 Streptococcus pyogenes 0.00 2 2 S 2173853 Streptococcus chenjunshii 0.00 1 1 S 2021971 Streptococcus respiraculi 0.00 1 1 G 1357 Lactococcus 0.00 2 0 F 186827 Aerococcaceae 0.00 1 1 G 1375 Aerococcus 0.00 1 0 G 2862144 Ruoffia 0.00 1 1 S 87458 Ruoffia tabacinasalis 0.11 88 3 O 1385 Bacillales 0.08 66 8 F 186817 Bacillaceae 0.03 21 2 G 1386 Bacillus 0.02 15 0 G1 653685 Bacillus subtilis group 0.02 15 0 G2 1938374 Bacillus amyloliquefaciens group 0.01 11 11 S 492670 Bacillus velezensis 0.00 4 4 S 1390 Bacillus amyloliquefaciens 0.00 3 0 G1 86661 Bacillus cereus group 0.00 1 1 S 1396 Bacillus cereus 0.00 1 0 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.00 1 0 S 1428 Bacillus thuringiensis 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 2841656 Bacillus sp. ZHX3 0.02 19 11 G 129337 Geobacillus 0.00 4 4 S 860353 Geobacillus proteiniphilus 0.00 4 0 G1 2642459 unclassified Geobacillus 0.00 4 4 S 1963025 Geobacillus sp. 46C-IIa 0.01 6 0 G 400634 Lysinibacillus 0.01 6 6 S 2086577 Lysinibacillus timonensis 0.00 4 4 G 2675231 Mesobacillus 0.00 2 0 G 2675229 Peribacillus 0.00 2 2 S 228899 Peribacillus asahii 0.00 2 0 G 84406 Virgibacillus 0.00 2 2 S 447199 Virgibacillus salarius 0.00 2 2 G 1055323 Aeribacillus 0.00 1 0 G 29331 Amphibacillus 0.00 1 0 S 1449 Amphibacillus xylanus 0.00 1 1 S1 698758 Amphibacillus xylanus NBRC 15112 0.00 1 0 G 45667 Halobacillus 0.00 1 1 S 45668 Halobacillus litoralis 0.01 8 0 F 90964 Staphylococcaceae 0.01 7 0 G 1279 Staphylococcus 0.00 3 3 S 70255 Staphylococcus condimenti 0.00 2 2 S 1283 Staphylococcus haemolyticus 0.00 1 1 S 1280 Staphylococcus aureus 0.00 1 1 S 1290 Staphylococcus hominis 0.00 1 1 G 2803850 Mammaliicoccus 0.01 6 0 F 186823 Alicyclobacillaceae 0.01 6 0 G 3156481 Fodinisporobacter 0.01 6 6 S 2901836 Fodinisporobacter ferrooxydans 0.00 3 0 F 186818 Planococcaceae 0.00 3 3 G 1372 Planococcus 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 1 0 F 186822 Paenibacillaceae 0.00 1 0 G 44249 Paenibacillus 0.00 1 1 S 61624 Paenibacillus mucilaginosus 0.69 574 0 C 526524 Erysipelotrichia 0.69 574 0 O 526525 Erysipelotrichales 0.53 437 0 F 2810281 Turicibacteraceae 0.53 437 349 G 191303 Turicibacter 0.10 79 79 S 154288 Turicibacter sanguinis 0.01 9 0 G1 2638206 unclassified Turicibacter 0.01 8 8 S 1712675 Turicibacter sp. H121 0.00 1 1 S 3114695 Turicibacter sp. KK003 0.15 128 1 F 2810280 Coprobacillaceae 0.14 117 0 G 2678885 Faecalibacillus 0.14 117 117 S 1982626 Faecalibacillus intestinalis 0.01 6 0 G 135858 Catenibacterium 0.01 6 0 G1 2643636 unclassified Catenibacterium 0.01 6 6 S 2478954 Catenibacterium sp. co_0103 0.00 4 3 G 3025755 Thomasclavelia 0.00 1 0 S 29348 Thomasclavelia spiroformis 0.00 1 1 S1 428126 Thomasclavelia spiroformis DSM 1552 0.01 9 0 F 128827 Erysipelotrichaceae 0.01 6 0 G 174708 Allobaculum 0.00 4 0 G1 2623473 unclassified Allobaculum 0.00 4 4 S 2853432 Allobaculum sp. Allo2 0.00 2 2 S 2834459 Allobaculum mucilyticum 0.00 2 0 G 1729679 Faecalibaculum 0.00 2 2 S 1702221 Faecalibaculum rodentium 0.00 1 0 G 2749267 Amedibacterium 0.00 1 1 S 2583452 Amedibacterium intestinale 0.20 165 0 C 909932 Negativicutes 0.14 120 0 O 1843488 Acidaminococcales 0.14 120 1 F 909930 Acidaminococcaceae 0.14 119 67 G 33024 Phascolarctobacterium 0.06 50 50 S 626940 Phascolarctobacterium succinatutens 0.00 2 2 S 33025 Phascolarctobacterium faecium 0.05 44 0 O 1843489 Veillonellales 0.05 44 0 F 31977 Veillonellaceae 0.03 26 23 G 39948 Dialister 0.00 3 3 S 39950 Dialister pneumosintes 0.02 17 12 G 29465 Veillonella 0.01 5 5 S 39777 Veillonella atypica 0.00 1 1 G 906 Megasphaera 0.00 1 0 O 909929 Selenomonadales 0.00 1 0 F 1843491 Selenomonadaceae 0.00 1 0 G 970 Selenomonas 0.00 1 0 S 971 Selenomonas ruminantium 0.00 1 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.00 1 1 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.03 21 0 C 1737404 Tissierellia 0.03 21 0 O 1737405 Tissierellales 0.02 19 0 F 1570339 Peptoniphilaceae 0.02 13 0 G 543311 Parvimonas 0.02 13 13 S 33033 Parvimonas micra 0.00 3 0 G 2126548 Miniphocaeibacter 0.00 3 3 S 2931922 Miniphocaeibacter halophilus 0.00 2 2 G 162289 Peptoniphilus 0.00 1 0 G 1161127 Murdochiella 0.00 1 1 S 1852373 Murdochiella vaginalis 0.00 2 0 F 2992717 Acidilutibacteraceae 0.00 2 0 G 2992720 Acidilutibacter 0.00 2 2 S 2507161 Acidilutibacter cellobiosedens 0.01 5 0 P1 84086 unclassified Bacillota 0.01 5 5 S 243899 endosymbiont 'TC1' of Trimyema compressum 2.95 2445 2 P 201174 Actinomycetota 1.67 1385 4 C 1760 Actinomycetes 1.47 1219 0 O 85004 Bifidobacteriales 1.47 1219 3 F 31953 Bifidobacteriaceae 1.46 1214 1018 G 1678 Bifidobacterium 0.18 150 63 S 216816 Bifidobacterium longum 0.08 66 66 S1 1682 Bifidobacterium longum subsp. infantis 0.02 19 19 S1 1679 Bifidobacterium longum subsp. longum 0.00 2 2 S1 1931217 Bifidobacterium longum subsp. suillum 0.03 29 29 S 1685 Bifidobacterium breve 0.01 6 6 S 28026 Bifidobacterium pseudocatenulatum 0.00 3 3 S 1454229 Bifidobacterium faecale 0.00 2 1 S 1694 Bifidobacterium pseudolongum 0.00 1 1 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.00 1 1 S 1686 Bifidobacterium catenulatum 0.00 1 1 S 1689 Bifidobacterium dentium 0.00 1 1 S 28025 Bifidobacterium animalis 0.00 1 1 S 1684 Bifidobacterium asteroides 0.00 1 1 S 77635 Bifidobacterium subtile 0.00 1 1 S 1683 Bifidobacterium angulatum 0.00 2 0 G 2701 Gardnerella 0.00 2 2 S 2792979 Gardnerella swidsinskii 0.07 61 0 O 85009 Propionibacteriales 0.05 41 0 F 85015 Nocardioidaceae 0.05 41 0 G 1839 Nocardioides 0.05 41 41 S 2663857 Nocardioides marmotae 0.02 20 1 F 31957 Propionibacteriaceae 0.02 18 0 G 1912216 Cutibacterium 0.02 18 18 S 1747 Cutibacterium acnes 0.00 1 0 G 2801844 Arachnia 0.00 1 1 S 1750 Arachnia propionica 0.05 44 0 O 85007 Mycobacteriales 0.02 19 0 F 85025 Nocardiaceae 0.02 19 0 G 1827 Rhodococcus 0.02 19 0 G1 2840174 Rhodococcus erythropolis group 0.02 19 19 S 1833 Rhodococcus erythropolis 0.02 14 3 F 1762 Mycobacteriaceae 0.01 7 0 G 1866885 Mycolicibacterium 0.01 7 7 S 370524 Mycolicibacterium pallens 0.00 4 0 G 1763 Mycobacterium 0.00 4 0 G1 77643 Mycobacterium tuberculosis complex 0.00 3 3 S 78331 Mycobacterium canetti 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.01 5 0 F 1653 Corynebacteriaceae 0.01 5 5 G 1716 Corynebacterium 0.00 4 0 F 2805586 Lawsonellaceae 0.00 4 0 G 1847725 Lawsonella 0.00 4 4 S 1528099 Lawsonella clevelandensis 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 1004901 Gordonia iterans 0.00 1 0 F 3040680 Hoyosellaceae 0.00 1 0 G 697025 Hoyosella 0.00 1 0 S 639313 Hoyosella subflava 0.00 1 1 S1 443218 Hoyosella subflava DQS3-9A1 0.03 23 0 O 85011 Kitasatosporales 0.03 23 1 F 2062 Streptomycetaceae 0.03 22 1 G 1883 Streptomyces 0.02 20 0 G1 2593676 unclassified Streptomyces 0.02 19 19 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 3075825 Streptomyces sp. AM8-1-1 0.00 1 1 S 83291 Streptomyces armeniacus 0.02 17 0 O 85006 Micrococcales 0.01 6 0 F 1268 Micrococcaceae 0.00 2 0 G 32207 Rothia 0.00 2 2 S 43675 Rothia mucilaginosa 0.00 2 2 G 57493 Kocuria 0.00 1 1 G 1269 Micrococcus 0.00 1 1 G 1742989 Glutamicibacter 0.00 4 0 F 85018 Dermatophilaceae 0.00 4 0 G 1184606 Austwickia 0.00 4 4 S 100225 Austwickia chelonae 0.00 2 0 F 2805590 Ornithinimicrobiaceae 0.00 2 0 G 125287 Ornithinimicrobium 0.00 2 2 S 2934161 Ornithinimicrobium cryptoxanthini 0.00 2 0 F 2805426 Kytococcaceae 0.00 2 0 G 57499 Kytococcus 0.00 2 2 S 1276 Kytococcus sedentarius 0.00 1 0 F 1331736 Ruaniaceae 0.00 1 0 G 626119 Ruania 0.00 1 1 S 2603206 Ruania zhangjianzhongii 0.00 1 0 F 85023 Microbacteriaceae 0.00 1 0 G 33877 Agromyces 0.00 1 0 G1 2639701 unclassified Agromyces 0.00 1 1 S 3156399 Agromyces sp. G08B096 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 0 G 154116 Georgenia 0.00 1 1 S 2585135 Georgenia wutianyii 0.01 10 0 O 2037 Actinomycetales 0.01 10 0 F 2049 Actinomycetaceae 0.01 6 1 G 2529408 Schaalia 0.00 3 3 S 52773 Schaalia meyeri 0.00 2 0 S 181487 Schaalia cardiffensis 0.00 2 2 S1 888050 Schaalia cardiffensis F0333 0.00 4 3 G 1654 Actinomyces 0.00 1 0 G1 2609248 unclassified Actinomyces 0.00 1 1 S 712122 Actinomyces sp. oral taxon 414 0.00 2 0 O 85008 Micromonosporales 0.00 2 0 F 28056 Micromonosporaceae 0.00 2 0 G 1873 Micromonospora 0.00 1 1 S 47857 Micromonospora echinaurantiaca 0.00 1 1 S 47875 Micromonospora sagamiensis 0.00 2 0 O 85010 Pseudonocardiales 0.00 2 0 F 2070 Pseudonocardiaceae 0.00 2 1 G 1847 Pseudonocardia 0.00 1 0 G1 2619320 unclassified Pseudonocardia 0.00 1 1 S 445576 Pseudonocardia sp. AL041005-10 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 0 F 2162846 Candidatus Nanopelagicaceae 0.00 2 0 G 622681 Candidatus Planktophila 0.00 2 2 S 1884913 Candidatus Planktophila lacus 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 2012 Thermomonosporaceae 0.00 1 0 G 2019 Thermomonospora 0.00 1 1 S 1411117 Thermomonospora amylolytica 1.27 1053 2 C 84998 Coriobacteriia 0.80 662 1 O 84999 Coriobacteriales 0.78 644 0 F 84107 Coriobacteriaceae 0.78 643 13 G 102106 Collinsella 0.76 630 630 S 74426 Collinsella aerofaciens 0.00 1 0 G 1472762 Enorma 0.00 1 1 S 1871019 Enorma phocaeensis 0.01 9 1 F 1643824 Atopobiaceae 0.00 4 0 G 133925 Olsenella 0.00 4 0 S 133926 Olsenella uli 0.00 4 4 S1 633147 Olsenella uli DSM 7084 0.00 4 4 G 2082587 Parolsenella 0.01 8 0 F 3153719 Kribbibacteriaceae 0.01 8 0 G 2995122 Leptogranulimonas 0.01 8 8 S 2894156 Leptogranulimonas caecicola 0.47 389 0 O 1643822 Eggerthellales 0.47 389 16 F 1643826 Eggerthellaceae 0.24 202 137 G 447020 Adlercreutzia 0.06 50 50 S 2707299 Adlercreutzia hattorii 0.02 15 15 S 446660 Adlercreutzia equolifaciens 0.14 112 0 G 1981050 Phoenicibacter 0.14 112 112 S 1944646 Phoenicibacter congonensis 0.05 41 39 G 644652 Gordonibacter 0.00 2 0 S 471189 Gordonibacter pamelaeae 0.00 2 2 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.01 9 0 G 84111 Eggerthella 0.01 7 7 S 84112 Eggerthella lenta 0.00 2 0 G1 2648737 unclassified Eggerthella 0.00 2 2 S 502558 Eggerthella sp. YY7918 0.00 3 0 G 2815775 Berryella 0.00 3 3 S 2734634 Berryella wangjianweii 0.00 2 0 G 79603 Denitrobacterium 0.00 2 2 S 79604 Denitrobacterium detoxificans 0.00 2 0 G 84108 Slackia 0.00 2 2 S 84110 Slackia heliotrinireducens 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.00 1 0 G 2981344 Xiamenia 0.00 1 1 S 2682776 Xiamenia xianingshaonis 0.00 2 0 C 908620 Nitriliruptoria 0.00 2 0 O 1755823 Egicoccales 0.00 2 0 F 1755824 Egicoccaceae 0.00 2 0 G 1755825 Egicoccus 0.00 2 2 S 1670830 Egicoccus halophilus 0.00 2 0 C 1497346 Thermoleophilia 0.00 1 0 O 588674 Thermoleophilales 0.00 1 0 F 320796 Thermoleophilaceae 0.00 1 0 G 192992 Thermoleophilum 0.00 1 1 S 29539 Thermoleophilum album 0.00 1 0 O 2843198 Miltoncostaeales 0.00 1 0 F 2843199 Miltoncostaeaceae 0.00 1 0 G 2843200 Miltoncostaea 0.00 1 1 S 2843216 Miltoncostaea oceani 0.00 1 0 C 84992 Acidimicrobiia 0.00 1 0 O 84993 Acidimicrobiales 0.00 1 0 F 2448023 Ilumatobacteraceae 0.00 1 0 G 682522 Ilumatobacter 0.00 1 0 S 467094 Ilumatobacter coccineus 0.00 1 1 S1 1313172 Ilumatobacter coccineus YM16-304 0.03 26 3 P 200795 Chloroflexota 0.02 19 0 C 301297 Dehalococcoidia 0.02 19 0 O 1202465 Dehalococcoidales 0.02 19 0 F 1202464 Dehalococcoidaceae 0.02 19 19 G 61434 Dehalococcoides 0.00 3 0 C 292625 Anaerolineae 0.00 3 0 O 292629 Anaerolineales 0.00 3 0 F 292628 Anaerolineaceae 0.00 3 0 G 1649478 Pelolinea 0.00 3 3 S 913107 Pelolinea submarina 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.01 9 0 P 544448 Mycoplasmatota 0.01 8 0 O 2790996 Mycoplasmoidales 0.00 4 4 F 2790998 Mycoplasmoidaceae 0.00 4 0 F 2895623 Metamycoplasmataceae 0.00 4 0 G 2767358 Mycoplasmopsis 0.00 4 4 S 33923 Mycoplasmopsis felis 0.00 1 0 C 31969 Mollicutes 0.00 1 0 O 186329 Acholeplasmatales 0.00 1 1 F 2146 Acholeplasmataceae 0.01 5 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.01 5 0 P 1117 Cyanobacteriota 0.01 5 0 C 3028117 Cyanophyceae 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1150 Oscillatoriales 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 482564 Oscillatoria nigro-viridis 0.00 1 1 S1 179408 Oscillatoria nigro-viridis PCC 7112 0.00 1 0 O 1890424 Synechococcales 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 0 G1 2626047 unclassified Synechococcus 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 0 G1 2631661 unclassified Acaryochloris 0.00 1 1 S 2740837 Acaryochloris sp. 'Moss Beach' 22.47 18622 14 P 1224 Pseudomonadota 16.88 13991 25 C 1236 Gammaproteobacteria 12.13 10051 0 O 72274 Pseudomonadales 12.13 10051 26 F 135621 Pseudomonadaceae 12.07 10005 9107 G 286 Pseudomonas 0.31 261 51 G1 196821 unclassified Pseudomonas 0.08 63 63 S 2931382 Pseudomonas sp. PIA16 0.05 43 43 S 2954092 Pseudomonas sp. FP2335 0.02 16 16 S 2895471 Pseudomonas sp. B21-010 0.02 14 14 S 2954094 Pseudomonas sp. FP453 0.01 9 9 S 2954080 Pseudomonas sp. FP1762 0.01 8 8 S 2976884 Pseudomonas sp. FJ2-5-13 0.01 7 7 S 2871095 Pseudomonas sp. DR48 0.01 7 7 S 2954097 Pseudomonas sp. FP603 0.01 6 6 S 1855380 Pseudomonas sp. Z003-0.4C(8344-21) 0.01 5 5 S 1649877 Pseudomonas sp. CCOS 191 0.01 5 5 S 2954088 Pseudomonas sp. FP2262 0.00 4 4 S 2705472 Pseudomonas sp. MTM4 0.00 4 4 S 2748080 Pseudomonas sp. ABC1 0.00 3 3 S 2954078 Pseudomonas sp. FP1740 0.00 3 3 S 2895472 Pseudomonas sp. B21-012 0.00 3 3 S 1357074 Pseudomonas sp. LS44 0.00 2 2 S 2944392 Pseudomonas sp. BYT-5 0.00 2 2 S 3035289 Pseudomonas sp. NyZ480 0.00 2 2 S 3137451 Pseudomonas sp. G.S.17 0.00 1 1 S 1500686 Pseudomonas sp. Os17 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2559074 Pseudomonas sp. S150 0.00 1 1 S 2921518 Pseudomonas sp. FSL L8-0168 0.26 215 0 G1 136843 Pseudomonas fluorescens group 0.14 114 0 S 47883 Pseudomonas synxantha 0.14 114 114 S1 96901 Pseudomonas synxantha BG33R 0.05 45 45 S 47878 Pseudomonas azotoformans 0.03 23 23 S 183795 Pseudomonas mediterranea 0.02 15 15 S 200450 Pseudomonas trivialis 0.02 14 14 S 321662 Pseudomonas moraviensis 0.00 2 2 S 76761 Pseudomonas veronii 0.00 2 1 S 294 Pseudomonas fluorescens 0.00 1 1 S1 1038922 Pseudomonas fluorescens Q2-87 0.14 116 0 G1 136845 Pseudomonas putida group 0.07 61 61 S 78327 Pseudomonas mosselii 0.07 55 55 S 303 Pseudomonas putida 0.10 84 0 G1 136841 Pseudomonas aeruginosa group 0.10 84 83 S 287 Pseudomonas aeruginosa 0.00 1 1 S1 1340851 Pseudomonas aeruginosa RP73 0.06 49 0 G1 136842 Pseudomonas chlororaphis group 0.06 49 49 S 380021 Pseudomonas protegens 0.05 40 40 S 2738125 Pseudomonas hefeiensis 0.05 39 39 S 46677 Pseudomonas agarici 0.02 18 18 S 2853159 Pseudomonas pergaminensis 0.02 13 0 G1 136849 Pseudomonas syringae group 0.02 13 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.02 13 0 S 317 Pseudomonas syringae 0.01 10 10 S1 1357285 Pseudomonas syringae CC457 0.00 3 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 3 3 S2 103796 Pseudomonas syringae pv. actinidiae 0.01 11 11 S 437900 Pseudomonas marincola 0.01 10 10 S 1499686 Pseudomonas saudiphocaensis 0.01 8 8 S 2894079 Pseudomonas oryziphila 0.01 8 8 S 2954098 Pseudomonas wuhanensis 0.01 7 7 S 1302376 Candidatus Pseudomonas adelgestsugas 0.01 6 6 S 930166 Pseudomonas brassicacearum 0.00 4 4 S 2599595 Pseudomonas eucalypticola 0.00 3 3 S 321846 Pseudomonas simiae 0.00 2 2 S 2842346 Pseudomonas siliginis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 2681983 Pseudomonas bijieensis 0.00 1 1 S 2995174 Pseudomonas quebecensis 0.01 8 7 G 2901189 Halopseudomonas 0.00 1 1 S 797277 Halopseudomonas litoralis 0.01 5 0 G 2758906 Entomomonas 0.00 4 0 G1 2785330 unclassified Entomomonas 0.00 4 4 S 2930213 Entomomonas sp. E2T0 0.00 1 1 S 2785331 Entomomonas asaccharolytica 0.00 4 0 F1 351 Azotobacter group 0.00 4 4 G 352 Azotobacter 0.00 1 0 G 1654787 Thiopseudomonas 0.00 1 1 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 G 2901164 Stutzerimonas 0.00 1 0 G1 136846 Stutzerimonas stutzeri group 0.00 1 1 S 74829 Stutzerimonas balearica 0.00 1 0 G 2901261 Denitrificimonas 0.00 1 1 S 521720 Denitrificimonas caeni 4.43 3669 37 O 91347 Enterobacterales 2.89 2399 545 F 543 Enterobacteriaceae 1.19 986 0 G 561 Escherichia 1.19 985 835 S 562 Escherichia coli 0.18 147 147 S1 316435 Escherichia coli Nissle 1917 0.00 2 0 S1 83334 Escherichia coli O157:H7 0.00 2 2 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.00 1 1 S 1499973 Escherichia marmotae 0.59 486 0 G 544 Citrobacter 0.57 473 473 S 2971264 Citrobacter enshiensis 0.02 13 0 G1 1344959 Citrobacter freundii complex 0.01 5 5 S 67827 Citrobacter werkmanii 0.00 4 4 S 1639133 Citrobacter portucalensis 0.00 4 4 S 1748967 Citrobacter cronae 0.17 142 0 G 547 Enterobacter 0.17 139 0 G1 354276 Enterobacter cloacae complex 0.16 133 133 S 299767 Enterobacter ludwigii 0.00 4 4 S 158836 Enterobacter hormaechei 0.00 1 1 S 61645 Enterobacter asburiae 0.00 1 1 S 208224 Enterobacter kobei 0.00 2 2 S 881260 Enterobacter bugandensis 0.00 1 0 G1 2608935 unclassified Enterobacter 0.00 1 1 S 2724468 Enterobacter sp. JUb54 0.13 110 1 F1 2890311 Klebsiella/Raoultella group 0.13 109 11 G 570 Klebsiella 0.10 84 49 S 573 Klebsiella pneumoniae 0.04 35 34 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.01 6 5 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 3 3 S 1134687 Klebsiella michiganensis 0.00 2 2 S 548 Klebsiella aerogenes 0.00 2 0 G1 2608929 unclassified Klebsiella 0.00 2 2 S 2851540 Klebsiella sp. PL-2018 0.00 1 0 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.13 105 7 G 590 Salmonella 0.12 97 7 S 28901 Salmonella enterica 0.11 90 6 S1 59201 Salmonella enterica subsp. enterica 0.04 32 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.02 18 18 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 11 11 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 3 3 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.02 15 15 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.02 13 13 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 6 4 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 6 6 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 3 3 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 2 0 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 2 2 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.00 2 2 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 0 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 1 1 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 0 S2 436295 Salmonella enterica subsp. enterica serovar Poona 0.00 1 1 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 1 1 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 1 S 54736 Salmonella bongori 0.01 10 0 G 1330547 Kosakonia 0.01 10 10 S 208223 Kosakonia cowanii 0.00 4 0 F1 191675 Enterobacteriaceae incertae sedis 0.00 4 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 3 0 F3 146507 aphid secondary symbionts 0.00 2 2 G 568987 Candidatus Hamiltonella 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 0 G 1302410 Candidatus Annandia 0.00 1 1 S 1302411 Candidatus Annandia adelgestsuga 0.00 3 3 G 158483 Cedecea 0.00 3 0 G 2815296 Jejubacter 0.00 3 3 S 2579935 Jejubacter calystegiae 0.00 2 0 G 1048757 Candidatus Moranella 0.00 2 2 S 1048758 Candidatus Moranella endobia 0.00 1 0 F1 36866 unclassified Enterobacteriaceae 0.00 1 1 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 1 0 G 1903434 Atlantibacter 0.00 1 1 S 565 Atlantibacter hermannii 0.00 1 0 G 451512 Mangrovibacter 0.00 1 1 S 1691903 Mangrovibacter phragmitis 1.41 1165 770 F 1903411 Yersiniaceae 0.43 358 316 G 613 Serratia 0.03 27 27 S 61652 Serratia rubidaea 0.01 11 11 S 138074 Serratia symbiotica 0.00 2 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 2 2 S 2785630 Serratia sp. CMO1 0.00 1 0 S 82996 Serratia plymuthica 0.00 1 1 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 614 Serratia liquefaciens 0.04 34 4 G 629 Yersinia 0.03 22 0 G1 1649845 Yersinia pseudotuberculosis complex 0.03 22 0 S 632 Yersinia pestis 0.01 12 12 S1 748678 Yersinia pestis str. Pestoides B 0.01 5 5 S1 1035377 Yersinia pestis A1122 0.00 4 4 S1 649716 Yersinia pestis Pestoides G 0.00 1 1 S1 1345705 Yersinia pestis 1522 0.00 4 3 S 630 Yersinia enterocolitica 0.00 1 0 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 1 1 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.00 3 3 S 935293 Yersinia entomophaga 0.00 1 0 S 29483 Yersinia aldovae 0.00 1 1 S1 1453495 Yersinia aldovae 670-83 0.00 2 0 G 34037 Rahnella 0.00 2 2 S 1510570 Rahnella victoriana 0.00 1 1 G 1927833 Candidatus Fukatsuia 0.07 57 8 F 1903414 Morganellaceae 0.05 39 1 G 586 Providencia 0.05 38 0 S 516075 Providencia sneebia 0.05 38 38 S1 1141660 Providencia sneebia DSM 19967 0.01 8 0 G 581 Morganella 0.01 8 8 S 582 Morganella morganii 0.00 2 0 G 583 Proteus 0.00 2 2 S 584 Proteus mirabilis 0.01 5 1 F 1903409 Erwiniaceae 0.00 3 0 G 551 Erwinia 0.00 3 3 S 1922217 Candidatus Erwinia haradaeae 0.00 1 0 G 53335 Pantoea 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.01 5 0 F 2812006 Bruguierivoracaceae 0.01 5 0 G 84565 Sodalis 0.00 4 4 S 2697027 Sodalis ligni 0.00 1 0 S 1486991 Candidatus Sodalis pierantonius 0.00 1 1 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 2172100 Limnobaculum 0.00 1 1 S 2498113 Limnobaculum zhutongyuii 0.16 136 0 O 135623 Vibrionales 0.16 136 3 F 641 Vibrionaceae 0.15 127 113 G 662 Vibrio 0.01 5 1 G1 2614977 unclassified Vibrio 0.00 3 3 S 2819100 Vibrio sp. SCSIO 43140 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.00 2 2 S 687 Vibrio gazogenes 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 666 Vibrio cholerae 0.00 1 1 S 1824638 Vibrio japonicus 0.00 1 0 G1 717610 Vibrio harveyi group 0.00 1 0 G2 2315253 Vibrio diabolicus subgroup 0.00 1 1 S 50719 Vibrio diabolicus 0.00 1 1 S 2572923 Vibrio taketomensis 0.00 1 1 S 28172 Vibrio metschnikovii 0.00 1 1 S 29494 Vibrio furnissii 0.00 4 3 G 51366 Salinivibrio 0.00 1 1 S 334715 Salinivibrio proteolyticus 0.00 2 0 G 657 Photobacterium 0.00 1 1 S 38293 Photobacterium damselae 0.00 1 1 S 553611 Photobacterium leiognathi 0.03 26 0 O 2887326 Moraxellales 0.03 26 0 F 468 Moraxellaceae 0.03 23 8 G 469 Acinetobacter 0.01 10 10 S 29430 Acinetobacter haemolyticus 0.00 4 0 G1 196816 unclassified Acinetobacter 0.00 4 4 S 2714110 Acinetobacter sp. Marseille-Q1620 0.00 1 1 S 280145 Acinetobacter colistiniresistens 0.00 2 0 G 497 Psychrobacter 0.00 2 0 G1 196806 unclassified Psychrobacter 0.00 2 2 S 1415574 Psychrobacter sp. LV10R520-6 0.00 1 0 G 475 Moraxella 0.00 1 1 S 2904120 Moraxella nasibovis 0.03 26 0 O 135619 Oceanospirillales 0.03 26 3 F 28256 Halomonadaceae 0.02 19 1 G 2745 Halomonas 0.02 18 18 G1 2609666 unclassified Halomonas 0.00 3 0 G 404432 Salinicola 0.00 3 3 S 1949083 Salinicola endophyticus 0.00 1 0 G 204286 Cobetia 0.00 1 0 G1 2609414 unclassified Cobetia 0.00 1 1 S 2686360 Cobetia sp. L2A1 0.03 25 0 O 135625 Pasteurellales 0.03 25 1 F 712 Pasteurellaceae 0.03 21 1 G 724 Haemophilus 0.02 20 19 S 729 Haemophilus parainfluenzae 0.00 1 1 S1 888828 Haemophilus parainfluenzae ATCC 33392 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.00 1 0 G 713 Actinobacillus 0.00 1 0 S 718 Actinobacillus equuli 0.00 1 1 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 1 G 416916 Aggregatibacter 0.02 17 0 O 135614 Lysobacterales 0.02 17 1 F 32033 Lysobacteraceae 0.01 9 0 G 338 Xanthomonas 0.01 9 9 S 29447 Xanthomonas albilineans 0.01 5 1 G 40323 Stenotrophomonas 0.00 3 0 G1 995085 Stenotrophomonas maltophilia group 0.00 2 2 G2 2961925 unclassified Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 1 1 S 128780 Stenotrophomonas acidaminiphila 0.00 1 0 G 68 Lysobacter 0.00 1 1 S 2822368 Lysobacter luteus 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.01 9 0 O 135622 Alteromonadales 0.01 5 0 F 267888 Pseudoalteromonadaceae 0.01 5 3 G 53246 Pseudoalteromonas 0.00 2 2 S 2774154 Pseudoalteromonas ostreae 0.00 2 0 F 267890 Shewanellaceae 0.00 2 1 G 22 Shewanella 0.00 1 1 S 2018305 Shewanella bicestrii 0.00 1 0 F 72275 Alteromonadaceae 0.00 1 0 F1 2903219 Alteromonas/Salinimonas group 0.00 1 1 G 226 Alteromonas 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 1 G 135575 Idiomarina 0.00 3 0 O 135613 Chromatiales 0.00 3 0 F 1046 Chromatiaceae 0.00 2 2 G 67575 Rheinheimera 0.00 1 0 G 2796146 Candidatus Nitrosacidococcus 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 2 0 O 135624 Aeromonadales 0.00 2 0 F 84642 Aeromonadaceae 0.00 2 2 G 642 Aeromonas 0.00 1 0 O 72273 Thiotrichales 0.00 1 1 F 135616 Piscirickettsiaceae 0.00 1 0 O 1706369 Cellvibrionales 0.00 1 1 F 1706372 Halieaceae 5.28 4373 3 C 28211 Alphaproteobacteria 4.96 4115 1231 O 766 Rickettsiales 3.47 2880 0 F 942 Anaplasmataceae 3.47 2876 0 F1 952 Wolbachieae 3.47 2876 2343 G 953 Wolbachia 0.60 500 133 G1 2640676 unclassified Wolbachia 0.18 149 149 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.08 64 64 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.03 21 21 S 3066184 Wolbachia endosymbiont (group B) of Xanthorhoe designata 0.02 18 18 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.02 13 13 S 3077922 Wolbachia endosymbiont (group A) of Ischnus inquisitorius 0.01 9 9 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.01 9 9 S 2742717 Wolbachia endosymbiont of Wiebesia pumilae 0.01 9 9 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.01 8 8 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.01 8 8 S 2954012 Wolbachia endosymbiont (group B) of Eucosma cana 0.01 7 7 S 2954037 Wolbachia endosymbiont (group B) of Pammene fasciana 0.01 6 6 S 2954056 Wolbachia endosymbiont (group A) of Sicus ferrugineus 0.01 5 5 S 3066179 Wolbachia endosymbiont (group B) of Idaea biselata 0.01 5 5 S 2954051 Wolbachia endosymbiont (group B) of Protocalliphora azurea 0.01 5 5 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.01 5 5 S 3066154 Wolbachia endosymbiont (group A) of Pipizella viduata 0.00 4 4 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.00 3 3 S 3066174 Wolbachia endosymbiont (group A) of Ennomos erosarius 0.00 3 3 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.00 2 2 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.00 2 2 S 2916816 Wolbachia endosymbiont of Howardula sp. 0.00 2 2 S 3066148 Wolbachia endosymbiont (group A) of Myopa testacea 0.00 2 2 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.00 2 2 S 2953988 Wolbachia endosymbiont (group A) of Bombylius major 0.00 1 1 S 3066200 Wolbachia endosymbiont (group A) of Gastracanthus pulcherrimus 0.00 1 1 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.00 1 1 S 163164 Wolbachia endosymbiont of Drosophila melanogaster 0.00 1 1 S 2954021 Wolbachia endosymbiont (group B) of Ischnura elegans 0.00 1 1 S 3066207 Wolbachia endosymbiont (group A) of Nomada goodeniana 0.00 1 1 S 3066175 Wolbachia endosymbiont (group B) of Ennomos erosarius 0.04 31 31 S 955 Wolbachia pipientis 0.00 2 2 S 1845000 Candidatus Wolbachia massiliensis 0.00 3 0 G 467749 Candidatus Neoehrlichia 0.00 3 3 S 89586 Neoehrlichia mikurensis 0.00 1 1 G 33993 Neorickettsia 0.00 2 0 F 775 Rickettsiaceae 0.00 2 2 F1 33988 Rickettsieae 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 1 0 O1 1699067 unclassified Rickettsiales 0.00 1 1 S 2486578 Rickettsiales endosymbiont of Stachyamoeba lipophora 0.24 199 0 O 356 Hyphomicrobiales 0.20 162 0 F 119045 Methylobacteriaceae 0.19 161 156 G 407 Methylobacterium 0.00 3 3 G1 2615210 unclassified Methylobacterium 0.00 2 2 S 269660 Methylobacterium brachiatum 0.00 1 0 G 2282523 Methylorubrum 0.00 1 0 G1 2648467 unclassified Methylorubrum 0.00 1 1 S 2897334 Methylorubrum sp. B1-46 0.01 12 2 F 41294 Nitrobacteraceae 0.01 10 0 G 374 Bradyrhizobium 0.01 10 0 G1 2631580 unclassified Bradyrhizobium 0.01 9 9 S 2590772 Bradyrhizobium sp. I71 0.00 1 1 S 2898442 Bradyrhizobium sp. 62B 0.01 8 0 F 335928 Xanthobacteraceae 0.01 8 0 G 556257 Pseudolabrys 0.01 8 0 G1 2638514 unclassified Pseudolabrys 0.01 8 8 S 2562284 Pseudolabrys sp. FHR47 0.01 7 0 F 82115 Rhizobiaceae 0.01 7 2 F1 227290 Rhizobium/Agrobacterium group 0.01 5 0 G 357 Agrobacterium 0.01 5 5 S 2792015 Agrobacterium leguminum 0.00 3 0 F 118882 Brucellaceae 0.00 3 3 F1 2826938 Brucella/Ochrobactrum group 0.00 2 0 F 45401 Hyphomicrobiaceae 0.00 1 1 G 81 Hyphomicrobium 0.00 1 1 G 1068 Rhodomicrobium 0.00 2 0 F 2821832 Stappiaceae 0.00 2 0 G 152161 Stappia 0.00 2 2 S 538381 Stappia indica 0.00 2 0 F 2831106 Devosiaceae 0.00 2 2 G 46913 Devosia 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.05 40 0 O 204441 Rhodospirillales 0.05 39 4 F 433 Acetobacteraceae 0.03 26 0 G 434 Acetobacter 0.03 26 0 G1 151157 Acetobacter subgen. Acetobacter 0.03 26 26 S 435 Acetobacter aceti 0.01 5 0 G 91914 Asaia 0.01 5 0 S 91915 Asaia bogorensis 0.01 5 5 S1 1231624 Asaia bogorensis NBRC 16594 0.00 3 2 G 1434011 Komagataeibacter 0.00 1 1 S 265960 Komagataeibacter nataicola 0.00 1 1 G 125216 Roseomonas 0.00 1 0 F 597359 Kiloniellaceae 0.00 1 0 G 1647175 Aestuariispira 0.00 1 1 S 2775080 Aestuariispira ectoiniformans 0.01 9 0 O 204455 Rhodobacterales 0.01 9 1 F 31989 Paracoccaceae 0.01 8 5 G 265 Paracoccus 0.00 3 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 3 3 S 3030011 Paracoccus sp. S3-43 0.00 4 1 O 204457 Sphingomonadales 0.00 3 0 F 41297 Sphingomonadaceae 0.00 1 0 G 165697 Sphingopyxis 0.00 1 0 G1 2614943 unclassified Sphingopyxis 0.00 1 1 S 2911495 Sphingopyxis sp. BSN-002 0.00 1 0 G 2676233 Sphingosinithalassobacter 0.00 1 0 G1 2676235 unclassified Sphingosinithalassobacter 0.00 1 1 S 2762748 Sphingosinithalassobacter sp. CS137 0.00 1 0 G 13687 Sphingomonas 0.00 1 1 S 386874 Sphingomonas sediminicola 0.00 2 0 O 204458 Caulobacterales 0.00 2 0 F 76892 Caulobacteraceae 0.00 2 1 G 41275 Brevundimonas 0.00 1 1 S 588932 Brevundimonas naejangsanensis 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 1 0 G 1521255 Candidatus Paracaedibacter 0.00 1 1 S 91604 Candidatus Paracaedibacter acanthamoebae 0.29 244 4 C 28216 Betaproteobacteria 0.26 215 3 O 80840 Burkholderiales 0.19 157 3 F 119060 Burkholderiaceae 0.10 83 82 G 48736 Ralstonia 0.00 1 0 G1 3116862 Ralstonia solanacearum species complex 0.00 1 1 S 305 Ralstonia solanacearum 0.08 69 11 G 106589 Cupriavidus 0.06 52 52 S 82633 Cupriavidus pauculus 0.01 5 5 S 164546 Cupriavidus taiwanensis 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.00 1 0 G 32008 Burkholderia 0.00 1 0 G1 87882 Burkholderia cepacia complex 0.00 1 1 S 152500 Burkholderia dolosa 0.00 1 0 G 2038280 Robbsia 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.04 30 0 F 995019 Sutterellaceae 0.03 21 0 G 1918598 Turicimonas 0.03 21 21 S 1796652 Turicimonas muris 0.01 9 0 G 40544 Sutterella 0.01 9 9 S 40545 Sutterella wadsworthensis 0.02 14 1 F 80864 Comamonadaceae 0.01 5 5 G 80865 Delftia 0.00 4 0 G 1436289 Candidatus Symbiobacter 0.00 4 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 4 4 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 3 0 G 283 Comamonas 0.00 2 2 S 225991 Comamonas aquatica 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 1 0 G 665874 Limnohabitans 0.00 1 0 G1 2626134 unclassified Limnohabitans 0.00 1 1 S 1678128 Limnohabitans sp. 63ED37-2 0.01 6 0 F 506 Alcaligenaceae 0.01 6 5 G 507 Alcaligenes 0.00 1 0 G1 259357 unclassified Alcaligenes 0.00 1 1 S 3136634 Alcaligenes sp. SDU_A2 0.00 3 1 F 2975441 Sphaerotilaceae 0.00 2 0 G 196013 Caldimonas 0.00 2 2 S 376175 Schlegelella aquatica 0.00 2 1 F 75682 Oxalobacteraceae 0.00 1 0 F1 2895353 Telluria group 0.00 1 1 G 149698 Massilia 0.02 15 3 O 32003 Nitrosomonadales 0.01 12 0 F 2008793 Sterolibacteriaceae 0.01 12 0 G 378210 Methyloversatilis 0.01 12 0 G1 2639971 unclassified Methyloversatilis 0.01 12 12 S 1842540 Methyloversatilis sp. RAC08 0.01 8 0 O 206351 Neisseriales 0.01 8 4 F 481 Neisseriaceae 0.00 3 1 G 482 Neisseria 0.00 2 2 S 28449 Neisseria subflava 0.00 1 0 G 299568 Uruburuella 0.00 1 1 S 252130 Uruburuella suis 0.00 2 0 O 206389 Rhodocyclales 0.00 2 0 F 75787 Rhodocyclaceae 0.00 2 0 G 1769726 Niveibacterium 0.00 2 0 G1 2648924 unclassified Niveibacterium 0.00 2 2 S 3135646 Niveibacterium sp. SC-1 12.75 10565 0 D1 1783270 FCB group 12.75 10565 0 D2 68336 Bacteroidota/Chlorobiota group 12.75 10565 0 P 976 Bacteroidota 12.67 10500 0 C 200643 Bacteroidia 12.67 10500 24 O 171549 Bacteroidales 10.00 8289 1753 F 815 Bacteroidaceae 4.22 3499 469 G 816 Bacteroides 2.56 2124 0 S 290053 Bacteroides helcogenes 2.56 2124 2124 S1 693979 Bacteroides helcogenes P 36-108 0.50 414 414 S 820 Bacteroides uniformis 0.20 166 166 S 329854 Bacteroides intestinalis 0.15 128 128 S 47678 Bacteroides caccae 0.06 50 50 S 1796613 Bacteroides caecimuris 0.04 37 37 S 46506 Bacteroides stercoris 0.03 27 27 S 817 Bacteroides fragilis 0.03 23 23 S 338188 Bacteroides finegoldii 0.02 16 16 S 291645 Bacteroides nordii 0.01 8 8 S 818 Bacteroides thetaiotaomicron 0.01 7 7 S 28113 Bacteroides heparinolyticus 0.01 7 7 S 371601 Bacteroides xylanisolvens 0.01 6 0 G1 139043 environmental samples 0.01 6 6 S 162156 uncultured Bacteroides sp. 0.00 4 4 S 477666 Bacteroides graminisolvens 0.00 3 3 S 291644 Bacteroides salyersiae 0.00 3 3 S 28116 Bacteroides ovatus 0.00 3 0 G1 2646097 unclassified Bacteroides 0.00 3 3 S 3117552 Bacteroides sp. MSB163 0.00 3 3 S 2650157 Bacteroides zhangwenhongii 0.00 1 1 S 28111 Bacteroides eggerthii 3.66 3037 87 G 909656 Phocaeicola 3.02 2502 0 S 376805 Phocaeicola salanitronis 3.02 2502 2502 S1 667015 Phocaeicola salanitronis DSM 18170 0.53 442 442 S 821 Phocaeicola vulgatus 0.00 4 4 S 357276 Phocaeicola dorei 0.00 2 2 S 387090 Phocaeicola coprophilus 0.96 794 38 F 2005473 Muribaculaceae 0.63 519 11 G 2518495 Duncaniella 0.46 378 378 S 2518971 Duncaniella dubosii 0.16 130 123 G1 2649562 unclassified Duncaniella 0.01 7 7 S 2576606 Duncaniella sp. B8 0.16 132 0 G 2518497 Paramuribaculum 0.16 132 132 S 2094151 Paramuribaculum intestinale 0.13 104 1 G 1918540 Muribaculum 0.08 67 67 S 2530390 Muribaculum gordoncarteri 0.04 36 36 S 1796646 Muribaculum intestinale 0.00 1 0 G 2815786 Sodaliphilus 0.00 1 1 S 2606626 Sodaliphilus pleomorphus 0.76 627 0 F 171550 Rikenellaceae 0.74 614 68 G 239759 Alistipes 0.20 163 9 S 214856 Alistipes finegoldii 0.19 154 154 S1 679935 Alistipes finegoldii DSM 17242 0.13 109 0 G1 538948 environmental samples 0.13 109 109 S 538949 uncultured Alistipes sp. 0.12 103 0 S 328814 Alistipes shahii 0.12 103 103 S1 717959 Alistipes shahii WAL 8301 0.10 81 81 S 328813 Alistipes onderdonkii 0.07 59 59 S 1288121 Alistipes senegalensis 0.03 24 24 S 2585118 Alistipes communis 0.01 6 6 S 2585119 Alistipes dispar 0.00 1 0 S 1470347 Alistipes ihumii 0.00 1 1 S1 1211813 Alistipes ihumii AP11 0.02 13 0 G 1647173 Acetobacteroides 0.02 13 0 G1 1760810 environmental samples 0.02 13 13 S 1760811 uncultured Acetobacteroides sp. 0.43 354 0 F 2005525 Tannerellaceae 0.43 353 158 G 375288 Parabacteroides 0.16 133 126 S 46503 Parabacteroides merdae 0.01 7 7 S1 411477 Parabacteroides merdae ATCC 43184 0.06 47 47 S 2685834 Parabacteroides chongii 0.01 6 0 G1 2649774 unclassified Parabacteroides 0.01 6 6 S 2951805 Parabacteroides sp. AD58 0.00 4 4 S 1217282 Parabacteroides faecis 0.00 2 2 S 328812 Parabacteroides goldsteinii 0.00 2 2 S 387661 Parabacteroides johnsonii 0.00 1 1 S 823 Parabacteroides distasonis 0.00 1 1 G 195950 Tannerella 0.38 316 1 F 171552 Prevotellaceae 0.31 260 0 G 577309 Paraprevotella 0.31 260 260 S 454154 Paraprevotella clara 0.05 41 35 G 838 Prevotella 0.00 3 0 G1 2638335 unclassified Prevotella 0.00 2 0 S 652716 Prevotella sp. oral taxon 299 0.00 2 2 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 1 1 S 2937774 Prevotella sp. E15-22 0.00 2 2 S 28132 Prevotella melaninogenica 0.00 1 0 S 52227 Prevotella dentalis 0.00 1 1 S1 908937 Prevotella dentalis DSM 3688 0.01 6 0 G 2974251 Segatella 0.00 4 2 S 165179 Segatella copri 0.00 2 2 S1 537011 Segatella copri DSM 18205 0.00 2 2 S 28135 Segatella oris 0.01 5 0 G 2884814 Pseudoprevotella 0.01 5 5 S 2133944 Pseudoprevotella muciniphila 0.00 3 0 G 558436 Xylanibacter 0.00 3 3 S 839 Xylanibacter ruminicola 0.07 57 0 F 1853231 Odoribacteraceae 0.05 43 0 G 574697 Butyricimonas 0.05 42 42 S 544645 Butyricimonas virosa 0.00 1 1 S 1472416 Butyricimonas faecihominis 0.02 14 0 G 283168 Odoribacter 0.02 14 14 S 28118 Odoribacter splanchnicus 0.03 23 0 F 2005520 Dysgonomonadaceae 0.03 23 0 G 156973 Dysgonomonas 0.03 23 22 G1 2630389 unclassified Dysgonomonas 0.00 1 1 S 2714926 Dysgonomonas sp. HDW5A 0.01 11 0 F 2005519 Barnesiellaceae 0.01 11 7 G 1348911 Coprobacter 0.00 4 0 S 1501392 Coprobacter secundus 0.00 4 4 S1 2751153 Coprobacter secundus subsp. similis 0.01 5 0 F 171551 Porphyromonadaceae 0.00 3 0 G 836 Porphyromonas 0.00 2 0 G1 2645799 unclassified Porphyromonas 0.00 2 2 S 712435 Porphyromonas sp. oral taxon 275 0.00 1 1 S 322095 Porphyromonas somerae 0.00 2 0 G 1159323 Macellibacteroides 0.00 2 0 G1 1243006 environmental samples 0.00 2 2 S 1243007 uncultured Macellibacteroides sp. 0.06 52 0 C 117743 Flavobacteriia 0.06 52 0 O 200644 Flavobacteriales 0.06 47 0 F 2762318 Weeksellaceae 0.05 45 0 F1 2782232 Chryseobacterium group 0.05 45 35 G 59732 Chryseobacterium 0.01 10 10 S 2929799 Chryseobacterium oryzae 0.00 2 0 G 308865 Elizabethkingia 0.00 2 2 S 238 Elizabethkingia meningoseptica 0.00 4 1 F 49546 Flavobacteriaceae 0.00 3 0 G 216431 Croceibacter 0.00 3 3 S 313588 Croceibacter atlanticus 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 3024544 Paracrocinitomix 0.00 1 1 S 2862509 Paracrocinitomix mangrovi 0.01 11 0 C 768503 Cytophagia 0.01 11 0 O 768507 Cytophagales 0.01 11 0 F 89373 Cytophagaceae 0.01 11 0 G 107 Spirosoma 0.01 11 11 S 2666025 Spirosoma endbachense 0.00 1 0 C 117747 Sphingobacteriia 0.00 1 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 0 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 2557994 Sphingobacterium sp. CZ-2 0.00 1 0 C 1853228 Chitinophagia 0.00 1 0 O 1853229 Chitinophagales 0.00 1 0 F 563835 Chitinophagaceae 0.00 1 0 G 1860196 Pseudobacter 0.00 1 1 S 661488 Pseudobacter ginsenosidimutans 0.32 268 0 P 203691 Spirochaetota 0.32 268 0 C 203692 Spirochaetia 0.32 268 0 O 136 Spirochaetales 0.32 268 0 F 2845253 Treponemataceae 0.32 268 268 G 157 Treponema 0.25 208 0 P 29547 Campylobacterota 0.25 208 0 C 3031852 Epsilonproteobacteria 0.25 208 0 O 213849 Campylobacterales 0.25 207 0 F 72293 Helicobacteraceae 0.25 207 197 G 209 Helicobacter 0.00 3 3 S 213 Helicobacter cinaedi 0.00 3 0 S 32025 Helicobacter hepaticus 0.00 3 3 S1 235279 Helicobacter hepaticus ATCC 51449 0.00 3 3 S 210 Helicobacter pylori 0.00 1 1 S 29419 Helicobacter canis 0.00 1 0 F 2808963 Arcobacteraceae 0.00 1 1 G 28196 Arcobacter 0.05 45 0 P 200940 Thermodesulfobacteriota 0.05 43 0 C 3031449 Desulfovibrionia 0.05 43 0 O 213115 Desulfovibrionales 0.05 43 0 F 194924 Desulfovibrionaceae 0.04 37 0 G 3126915 Taurinivorans 0.04 37 37 S 2787751 Taurinivorans muris 0.00 3 0 G 2802295 Nitratidesulfovibrio 0.00 3 3 S 881 Nitratidesulfovibrio vulgaris 0.00 1 0 G 872 Desulfovibrio 0.00 1 1 S 44742 Desulfovibrio fairfieldensis 0.00 1 0 G 2035811 Pseudodesulfovibrio 0.00 1 0 S 879567 Pseudodesulfovibrio piezophilus 0.00 1 1 S1 1322246 Pseudodesulfovibrio piezophilus C1TLV30 0.00 1 0 G 2909705 Oleidesulfovibrio 0.00 1 0 S 58180 Oleidesulfovibrio alaskensis 0.00 1 1 S1 207559 Oleidesulfovibrio alaskensis G20 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213465 Syntrophobacteraceae 0.00 1 0 G 29526 Syntrophobacter 0.00 1 0 S 119484 Syntrophobacter fumaroxidans 0.00 1 1 S1 335543 Syntrophobacter fumaroxidans MPOB 0.00 1 0 C 3031651 Desulfuromonadia 0.00 1 0 O 69541 Desulfuromonadales 0.00 1 0 F 2812024 Syntrophotaleaceae 0.00 1 0 G 2812025 Syntrophotalea 0.00 1 0 S 19 Syntrophotalea carbinolica 0.00 1 1 S1 338963 Syntrophotalea carbinolica DSM 2380 0.03 21 0 P 200930 Deferribacterota 0.03 21 0 C 68337 Deferribacteres 0.03 21 0 O 191393 Deferribacterales 0.02 20 0 F 2945020 Mucispirillaceae 0.02 20 0 G 248038 Mucispirillum 0.02 20 0 S 248039 Mucispirillum schaedleri 0.02 20 20 S1 1379858 Mucispirillum schaedleri ASF457 0.00 1 0 F 2945022 Flexistipitaceae 0.00 1 0 G 2351 Flexistipes 0.00 1 0 S 2352 Flexistipes sinusarabici 0.00 1 1 S1 717231 Flexistipes sinusarabici DSM 4947 0.01 8 0 D1 1783257 PVC group 0.01 7 0 P 74201 Verrucomicrobiota 0.01 7 0 C 203494 Verrucomicrobiia 0.01 7 0 O 48461 Verrucomicrobiales 0.01 7 0 F 1647988 Akkermansiaceae 0.01 7 4 G 239934 Akkermansia 0.00 2 2 S 239935 Akkermansia muciniphila 0.00 1 1 S 2927224 Akkermansia massiliensis 0.00 1 0 P 204428 Chlamydiota 0.00 1 0 C 204429 Chlamydiia 0.00 1 0 O 51291 Chlamydiales 0.00 1 0 F 809 Chlamydiaceae 0.00 1 0 F1 1113537 Chlamydia/Chlamydophila group 0.00 1 0 G 810 Chlamydia 0.00 1 0 S 83555 Chlamydia abortus 0.00 1 1 S1 1003238 Chlamydia abortus LLG 0.01 5 0 P 32066 Fusobacteriota 0.01 5 0 C 203490 Fusobacteriia 0.01 5 0 O 203491 Fusobacteriales 0.00 4 0 F 1129771 Leptotrichiaceae 0.00 4 4 G 32067 Leptotrichia 0.00 1 0 F 203492 Fusobacteriaceae 0.00 1 0 G 848 Fusobacterium 0.00 1 1 S 2764326 Fusobacterium hominis 0.00 4 0 P 200918 Thermotogota 0.00 4 0 C 188708 Thermotogae 0.00 3 0 O 1643946 Kosmotogales 0.00 3 0 F 1643948 Kosmotogaceae 0.00 3 3 G 1184396 Mesotoga 0.00 1 0 O 1643947 Petrotogales 0.00 1 0 F 1643949 Petrotogaceae 0.00 1 0 G 1255275 Oceanotoga 0.00 1 0 G1 2618448 unclassified Oceanotoga 0.00 1 1 S 2984951 Oceanotoga sp. DSM 15011 0.00 2 0 P 40117 Nitrospirota 0.00 2 0 C 203693 Nitrospiria 0.00 2 0 O 189778 Nitrospirales 0.00 2 0 F 189779 Nitrospiraceae 0.00 2 0 G 179 Leptospirillum 0.00 2 0 G1 655606 Leptospirillum sp. Group I 0.00 2 0 S 180 Leptospirillum ferrooxidans 0.00 2 2 S1 1162668 Leptospirillum ferrooxidans C2-3 0.00 2 0 P 508458 Synergistota 0.00 2 0 C 649775 Synergistia 0.00 2 0 O 649776 Synergistales 0.00 2 0 F 3029088 Dethiosulfovibrionaceae 0.00 2 0 G 638847 Pyramidobacter 0.00 2 2 S 638849 Pyramidobacter piscolens 0.00 1 0 P 2818505 Myxococcota 0.00 1 0 P1 3031711 Polyangia 0.00 1 0 O 3031713 Nannocystales 0.00 1 0 F 224463 Nannocystaceae 0.00 1 0 G 53 Nannocystis 0.00 1 1 S 2995304 Nannocystis poenicansa 0.00 1 0 D 2157 Archaea 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 183963 Halobacteria 0.00 1 0 O 2235 Halobacteriales 0.00 1 0 F 1644061 Natrialbaceae 0.00 1 0 G 3065677 Natrononativus 0.00 1 1 S 2963434 Natrononativus amylolyticus