1.13 2155 2155 U 0 unclassified 98.87 188494 5 R 1 root 98.86 188483 0 R1 131567 cellular organisms 98.86 188483 8168 D 2 Bacteria 63.59 121225 725 P 1224 Pseudomonadota 40.11 76470 1185 C 1236 Gammaproteobacteria 36.45 69499 0 O 135614 Lysobacterales 36.45 69493 2 F 32033 Lysobacteraceae 36.44 69469 0 G 338 Xanthomonas 36.44 69468 69468 S 29447 Xanthomonas albilineans 0.00 1 1 S 48664 Xanthomonas fragariae 0.01 13 6 G 40323 Stenotrophomonas 0.00 5 5 S 2045451 Stenotrophomonas indicatrix 0.00 2 1 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 G2 2961925 unclassified Stenotrophomonas maltophilia group 0.00 5 5 G 68 Lysobacter 0.00 2 2 G 83618 Pseudoxanthomonas 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.00 1 0 G 83614 Luteimonas 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 2925842 Luteimonas sp. S4-F44 0.00 6 4 F 1775411 Rhodanobacteraceae 0.00 2 0 G 242605 Luteibacter 0.00 1 1 S 564369 Luteibacter anthropi 0.00 1 1 S 2911539 Luteibacter aegosomatissinici 2.31 4402 637 O 91347 Enterobacterales 1.13 2146 328 F 543 Enterobacteriaceae 0.30 574 1 G 561 Escherichia 0.30 569 488 S 562 Escherichia coli 0.02 41 41 S1 1322345 Escherichia coli ATCC 25922 0.00 9 9 S1 316435 Escherichia coli Nissle 1917 0.00 7 7 S1 2079157 Escherichia coli O2:H1 0.00 7 7 S1 1446600 Escherichia coli O15:H18 0.00 5 5 S1 655817 Escherichia coli ABU 83972 0.00 5 5 S1 331112 Escherichia coli HS 0.00 4 2 S1 83334 Escherichia coli O157:H7 0.00 2 2 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 3 3 S1 2874053 Escherichia coli O25:H1 0.00 2 2 S 1499973 Escherichia marmotae 0.00 1 1 S 208962 Escherichia albertii 0.00 1 0 G1 2608889 unclassified Escherichia 0.00 1 1 S 2044467 Escherichia sp. E4742 0.25 474 0 F1 2890311 Klebsiella/Raoultella group 0.24 466 13 G 570 Klebsiella 0.17 325 310 S 573 Klebsiella pneumoniae 0.01 15 15 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.04 73 73 S 548 Klebsiella aerogenes 0.01 28 3 S 1463165 Klebsiella quasipneumoniae 0.01 25 25 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 9 9 S 1134687 Klebsiella michiganensis 0.00 8 8 S 571 Klebsiella oxytoca 0.00 5 3 S 244366 Klebsiella variicola 0.00 2 2 S1 2590157 Klebsiella variicola subsp. variicola 0.00 4 0 G1 2608929 unclassified Klebsiella 0.00 3 3 S 2829835 Klebsiella sp. P1954 0.00 1 1 S 2851540 Klebsiella sp. PL-2018 0.00 1 1 S 1259973 Klebsiella electrica 0.00 8 0 G 160674 Raoultella 0.00 6 0 G1 2627600 unclassified Raoultella 0.00 6 6 S 2799495 Raoultella sp. XY-1 0.00 1 1 S 575 Raoultella planticola 0.00 1 1 S 54291 Raoultella ornithinolytica 0.17 323 5 G 590 Salmonella 0.16 314 51 S 28901 Salmonella enterica 0.14 263 17 S1 59201 Salmonella enterica subsp. enterica 0.04 72 72 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.02 39 1 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 24 24 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 13 13 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 1 1 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.02 37 8 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.01 28 28 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.02 32 32 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 19 19 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 11 9 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 2 2 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.01 10 10 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 8 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 8 8 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 4 4 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 3 3 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 3 3 S2 486993 Salmonella enterica subsp. enterica serovar Eastbourne 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 1 S2 192954 Salmonella enterica subsp. enterica serovar Mbandaka 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 4 0 S 54736 Salmonella bongori 0.00 4 4 S1 1299282 Salmonella bongori CFSAN000510 0.16 310 3 G 547 Enterobacter 0.15 295 3 G1 354276 Enterobacter cloacae complex 0.12 235 235 S 299767 Enterobacter ludwigii 0.02 43 43 S 158836 Enterobacter hormaechei 0.00 6 4 S 550 Enterobacter cloacae 0.00 2 2 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 6 6 S 208224 Enterobacter kobei 0.00 2 2 S 61645 Enterobacter asburiae 0.01 11 11 S 881260 Enterobacter bugandensis 0.00 1 0 G1 2608935 unclassified Enterobacter 0.00 1 1 S 2870346 Enterobacter sp. C2 0.02 36 0 F1 191675 Enterobacteriaceae incertae sedis 0.02 36 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 23 0 F3 84564 ant endosymbionts 0.01 15 3 G 203804 Candidatus Blochmanniella 0.01 10 6 G1 711328 unclassified Candidatus Blochmanniella 0.00 3 3 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 1 0 S 251535 Candidatus Blochmanniella vafra 0.00 1 1 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.00 1 1 S 251540 Candidatus Blochmannia vicinus 0.00 8 0 G 1699619 Candidatus Westeberhardia 0.00 8 8 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 8 0 F3 146507 aphid secondary symbionts 0.00 7 7 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 2 0 G 1906657 Candidatus Doolittlea 0.00 2 2 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1302410 Candidatus Annandia 0.00 1 1 S 1302411 Candidatus Annandia adelgestsuga 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.02 32 1 G 544 Citrobacter 0.01 28 0 G1 1344959 Citrobacter freundii complex 0.01 12 12 S 1639133 Citrobacter portucalensis 0.00 8 8 S 67828 Citrobacter gillenii 0.00 7 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 6 6 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.00 1 1 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 1 1 S 67827 Citrobacter werkmanii 0.00 2 2 S 1563222 Citrobacter pasteurii 0.00 1 1 S 2971264 Citrobacter enshiensis 0.01 25 2 F1 36866 unclassified Enterobacteriaceae 0.01 16 16 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 4 4 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 2 2 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 1 1 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.01 13 0 G 620 Shigella 0.01 13 13 S 623 Shigella flexneri 0.01 10 0 G 2815296 Jejubacter 0.01 10 10 S 2579935 Jejubacter calystegiae 0.00 4 0 G 409304 Candidatus Ishikawella 0.00 4 0 S 168169 Candidatus Ishikawella capsulata 0.00 4 4 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 3 1 G 83654 Leclercia 0.00 2 2 S 83655 Leclercia adecarboxylata 0.00 2 1 G 413496 Cronobacter 0.00 1 0 S 1163710 Cronobacter condimenti 0.00 1 1 S1 1073999 Cronobacter condimenti 1330 0.00 2 0 G 1048757 Candidatus Moranella 0.00 2 2 S 1048758 Candidatus Moranella endobia 0.00 1 0 G 579 Kluyvera 0.00 1 1 S 51288 Kluyvera ascorbata 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.00 1 0 G 2726810 Scandinavium 0.00 1 1 S 1851514 Scandinavium goeteborgense 0.00 1 0 G 2303321 Superficieibacter 0.00 1 0 G1 2645744 unclassified Superficieibacter 0.00 1 1 S 3031919 Superficieibacter sp. HKU1 0.00 1 0 G 1903434 Atlantibacter 0.00 1 1 S 565 Atlantibacter hermannii 0.00 1 0 G 1649298 Siccibacter 0.00 1 1 S 1505757 Siccibacter colletis 0.00 1 0 G 1330547 Kosakonia 0.00 1 1 S 208223 Kosakonia cowanii 0.00 1 0 G 1177214 Candidatus Profftia 0.00 1 0 G1 2735709 unclassified Candidatus Profftia 0.00 1 1 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 158483 Cedecea 0.00 1 1 S 158823 Cedecea lapagei 0.40 758 4 F 1903409 Erwiniaceae 0.38 720 237 G 53335 Pantoea 0.23 438 0 G1 2630326 unclassified Pantoea 0.23 436 436 S 592316 Pantoea sp. At-9b 0.00 2 2 S 2654192 Pantoea sp. JZ29 0.01 24 24 S 66269 Pantoea stewartii 0.00 9 9 S 1235990 Candidatus Pantoea carbekii 0.00 4 4 S 553 Pantoea ananatis 0.00 3 0 S 470934 Pantoea vagans 0.00 3 3 S1 712898 Pantoea vagans C9-1 0.00 2 2 S 59814 Pantoea dispersa 0.00 2 2 S 470931 Pantoea anthophila 0.00 1 1 S 470933 Pantoea eucalypti 0.01 20 0 G 551 Erwinia 0.00 8 8 S 65700 Erwinia tracheiphila 0.00 6 6 S 1922217 Candidatus Erwinia haradaeae 0.00 5 0 G1 2622719 unclassified Erwinia 0.00 4 4 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 3141543 Erwinia sp. HDF1-3R 0.00 1 1 S 3062598 Erwinia pyri 0.01 14 0 G 32199 Buchnera 0.01 14 6 S 9 Buchnera aphidicola 0.00 4 4 S1 1241833 Buchnera aphidicola (Anoecia oenotherae) 0.00 3 3 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 1 1 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.24 467 0 F 2812006 Bruguierivoracaceae 0.24 467 1 G 84565 Sodalis 0.24 449 449 S 2697027 Sodalis ligni 0.01 15 0 S 1486991 Candidatus Sodalis pierantonius 0.01 15 15 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 2 0 G1 2636512 unclassified Sodalis 0.00 2 2 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.13 243 10 F 1903411 Yersiniaceae 0.08 162 6 G 613 Serratia 0.05 91 91 S 615 Serratia marcescens 0.01 28 0 S 2338073 Serratia inhibens 0.01 28 28 S1 1154756 Serratia inhibens PRI-2C 0.01 25 25 S 138074 Serratia symbiotica 0.00 4 4 S 61652 Serratia rubidaea 0.00 3 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 3 3 S 2785630 Serratia sp. CMO1 0.00 3 0 S 82996 Serratia plymuthica 0.00 3 3 S1 1006598 Serratia plymuthica RVH1 0.00 2 2 S 614 Serratia liquefaciens 0.03 56 56 G 1927833 Candidatus Fukatsuia 0.01 10 0 G 629 Yersinia 0.01 10 0 G1 1649845 Yersinia pseudotuberculosis complex 0.01 10 1 S 632 Yersinia pestis 0.00 4 4 S1 1035377 Yersinia pestis A1122 0.00 3 3 S1 649716 Yersinia pestis Pestoides G 0.00 2 2 S1 748678 Yersinia pestis str. Pestoides B 0.00 3 0 G 1745211 Chania 0.00 3 0 S 1639108 Chania multitudinisentens 0.00 3 3 S1 1441930 Chania multitudinisentens RB-25 0.00 1 0 G 34037 Rahnella 0.00 1 1 S 2816248 Rahnella bonaserana 0.00 1 0 G 1565532 Rouxiella 0.00 1 1 S 1646377 Rouxiella badensis 0.05 99 6 F 1903414 Morganellaceae 0.01 28 0 G 581 Morganella 0.01 28 28 S 582 Morganella morganii 0.01 26 0 G 583 Proteus 0.01 26 26 S 584 Proteus mirabilis 0.01 25 0 G 637 Arsenophonus 0.01 11 11 S 634113 Candidatus Arsenophonus lipoptenae 0.01 10 10 S 638 Arsenophonus nasoniae 0.00 4 0 G1 2627083 unclassified Arsenophonus 0.00 4 4 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 7 1 G 626 Xenorhabdus 0.00 3 0 S 40577 Xenorhabdus poinarii 0.00 3 3 S1 1354304 Xenorhabdus poinarii G6 0.00 2 2 S 628 Xenorhabdus nematophila 0.00 1 1 S 290110 Xenorhabdus budapestensis 0.00 5 0 G 586 Providencia 0.00 4 4 S 1715285 Candidatus Providencia siddallii 0.00 1 1 S 587 Providencia rettgeri 0.00 2 2 G 29487 Photorhabdus 0.03 49 9 F 1903410 Pectobacteriaceae 0.01 27 0 G 204037 Dickeya 0.01 24 24 S 1089444 Dickeya solani 0.00 2 2 S 204039 Dickeya dianthicola 0.00 1 1 S 1778540 Dickeya fangzhongdai 0.01 13 2 G 122277 Pectobacterium 0.00 9 9 S 1905730 Pectobacterium parmentieri 0.00 2 2 S 2485124 Pectobacterium polonicum 0.00 2 0 F 1903412 Hafniaceae 0.00 2 1 G 635 Edwardsiella 0.00 1 1 S 67780 Edwardsiella ictaluri 0.00 1 0 F 3120698 Gallaecimonadaceae 0.00 1 0 G 745410 Gallaecimonas 0.00 1 1 S 3029055 Gallaecimonas kandeliae 0.12 227 1 O 72274 Pseudomonadales 0.12 224 11 F 135621 Pseudomonadaceae 0.11 206 107 G 286 Pseudomonas 0.01 22 0 G1 136845 Pseudomonas putida group 0.01 12 12 S 78327 Pseudomonas mosselii 0.01 10 10 S 303 Pseudomonas putida 0.01 21 0 G1 136841 Pseudomonas aeruginosa group 0.01 21 21 S 287 Pseudomonas aeruginosa 0.01 20 2 G1 196821 unclassified Pseudomonas 0.00 2 2 S 2931382 Pseudomonas sp. PIA16 0.00 2 2 S 2705472 Pseudomonas sp. MTM4 0.00 2 2 S 1649877 Pseudomonas sp. CCOS 191 0.00 2 2 S 2025658 Pseudomonas sp. NS1(2017) 0.00 2 2 S 2954080 Pseudomonas sp. FP1762 0.00 1 1 S 1856685 Pseudomonas sp. TCU-HL1 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 2954084 Pseudomonas sp. FP198 0.00 1 1 S 2895483 Pseudomonas sp. B21-032 0.00 1 1 S 2559074 Pseudomonas sp. S150 0.00 1 1 S 1702250 Pseudomonas sp. IB20 0.00 1 1 S 2954092 Pseudomonas sp. FP2335 0.00 1 1 S 3020843 Pseudomonas sp. Q1-7 0.01 20 0 G1 136843 Pseudomonas fluorescens group 0.01 18 0 S 47883 Pseudomonas synxantha 0.01 18 18 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 651740 Pseudomonas cedrina 0.00 1 1 S 294 Pseudomonas fluorescens 0.00 3 3 S 2738125 Pseudomonas hefeiensis 0.00 3 3 S 437900 Pseudomonas marincola 0.00 3 3 S 46677 Pseudomonas agarici 0.00 2 1 G1 136849 Pseudomonas syringae group 0.00 1 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 1 1 S 317 Pseudomonas syringae 0.00 2 2 S 244566 Pseudomonas lurida 0.00 1 1 S 2599595 Pseudomonas eucalypticola 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 702115 Pseudomonas arsenicoxydans 0.00 3 0 G 2901189 Halopseudomonas 0.00 3 3 S 797277 Halopseudomonas litoralis 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 G 2758906 Entomomonas 0.00 1 1 S 2785331 Entomomonas asaccharolytica 0.00 1 0 G 2901164 Stutzerimonas 0.00 1 0 G1 136846 Stutzerimonas stutzeri group 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 2 0 F 3085095 Pseudohongiellaceae 0.00 2 0 G 1524249 Pseudohongiella 0.00 2 2 S 1249552 Pseudohongiella spirulinae 0.11 218 0 O 135615 Cardiobacteriales 0.11 214 2 F 868 Cardiobacteriaceae 0.10 200 0 G 13275 Suttonella 0.10 200 0 G1 2908647 unclassified Suttonella 0.10 200 200 S 2908648 Suttonella sp. R2A3 0.01 10 0 G 869 Dichelobacter 0.01 10 10 S 870 Dichelobacter nodosus 0.00 2 0 G 2717 Cardiobacterium 0.00 1 1 S 2718 Cardiobacterium hominis 0.00 1 0 G1 2648856 unclassified Cardiobacterium 0.00 1 1 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 4 0 F 3018589 Ignatzschineriaceae 0.00 2 0 G 112008 Ignatzschineria 0.00 2 2 S 2923279 Ignatzschineria rhizosphaerae 0.00 2 0 G 582472 Wohlfahrtiimonas 0.00 2 2 S 400946 Wohlfahrtiimonas chitiniclastica 0.09 165 0 O 2887326 Moraxellales 0.09 165 1 F 468 Moraxellaceae 0.09 164 5 G 469 Acinetobacter 0.03 64 64 S 202956 Acinetobacter towneri 0.03 60 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.03 56 56 S 470 Acinetobacter baumannii 0.00 3 0 S 48296 Acinetobacter pittii 0.00 3 3 S1 871585 Acinetobacter pittii PHEA-2 0.00 1 1 S 106654 Acinetobacter nosocomialis 0.01 10 0 G1 196816 unclassified Acinetobacter 0.00 6 6 S 3020716 Acinetobacter sp. GSS19 0.00 1 1 S 3120518 Acinetobacter sp. KS-LM10 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.00 1 1 S 3151494 Acinetobacter sp. ANC 7933 0.00 1 1 S 2773709 Acinetobacter sp. ASP199 0.00 9 9 S 40214 Acinetobacter johnsonii 0.00 6 6 S 756892 Acinetobacter indicus 0.00 6 6 S 487316 Acinetobacter soli 0.00 3 3 S 106649 Acinetobacter guillouiae 0.00 1 1 S 280145 Acinetobacter colistiniresistens 0.08 159 1 O 135619 Oceanospirillales 0.05 100 1 F 135620 Oceanospirillaceae 0.04 83 0 G 267849 Nitrincola 0.04 83 83 S 2614693 Nitrincola iocasae 0.01 10 1 G 28253 Marinomonas 0.00 9 9 S 2773454 Marinomonas algicola 0.00 3 0 G 515417 Amphritea 0.00 3 3 S 452627 Amphritea japonica 0.00 2 1 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 0 G 75687 Neptunomonas 0.00 1 1 S 1572645 Neptunomonas phycophila 0.02 33 0 F 28256 Halomonadaceae 0.01 22 0 G 2745 Halomonas 0.01 19 19 S 3031727 Halomonas piscis 0.00 2 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2883106 Halomonas sp. NyZ770 0.00 1 1 S 2982692 Halomonas sp. M4R1S46 0.00 1 1 S 29570 Halomonas meridiana 0.01 11 0 F1 114403 Zymobacter group 0.01 10 0 G 235572 Candidatus Portiera 0.01 10 10 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.01 10 0 F 2066474 Endozoicomonadaceae 0.01 10 10 G 305899 Endozoicomonas 0.00 9 0 F 2823145 Pleioneaceae 0.00 9 0 G 1502941 Pleionea 0.00 9 9 S 3070815 Pleionea litopenaei 0.00 2 0 F 255527 Saccharospirillaceae 0.00 1 0 G 230494 Reinekea 0.00 1 1 S 1336806 Reinekea forsetii 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.00 2 0 F 449732 Litorivicinaceae 0.00 2 0 G 418700 Litorivicinus 0.00 2 2 S 418701 Litorivicinus lipolyticus 0.00 1 1 F 224372 Alcanivoracaceae 0.00 1 0 F 224379 Hahellaceae 0.00 1 1 G 158481 Hahella 0.06 111 0 O 135623 Vibrionales 0.06 111 35 F 641 Vibrionaceae 0.03 61 4 G 662 Vibrio 0.01 17 17 S 666 Vibrio cholerae 0.01 12 0 G1 2614977 unclassified Vibrio 0.01 10 10 S 2661921 Vibrio sp. THAF191c 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.01 11 0 G1 717610 Vibrio harveyi group 0.00 9 9 S 669 Vibrio harveyi 0.00 1 1 S 670 Vibrio parahaemolyticus 0.00 1 0 G2 2315253 Vibrio diabolicus subgroup 0.00 1 1 S 50719 Vibrio diabolicus 0.01 10 0 S 52443 Vibrio tapetis 0.01 10 10 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 5 5 S 2572923 Vibrio taketomensis 0.00 1 1 S 1481923 Vibrio astriarenae 0.00 1 1 S 29497 Vibrio splendidus 0.00 8 0 G 657 Photobacterium 0.00 5 2 S 553611 Photobacterium leiognathi 0.00 3 3 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 3 0 S 38293 Photobacterium damselae 0.00 3 3 S1 85581 Photobacterium damselae subsp. damselae 0.00 6 0 G 511678 Aliivibrio 0.00 4 0 S 668 Aliivibrio fischeri 0.00 4 4 S1 1088719 Aliivibrio fischeri SR5 0.00 2 0 S 40269 Aliivibrio salmonicida 0.00 2 2 S1 316275 Aliivibrio salmonicida LFI1238 0.00 1 0 G 51366 Salinivibrio 0.00 1 1 S 1908198 Salinivibrio kushneri 0.05 99 0 O 135618 Methylococcales 0.05 98 4 F 403 Methylococcaceae 0.04 72 0 G 39773 Methylomicrobium 0.04 72 0 S 39775 Methylomicrobium album 0.04 72 72 S1 686340 Methylomicrobium album BG8 0.00 9 0 G 762296 Methylovulum 0.00 9 9 S 1704499 Methylovulum psychrotolerans 0.00 4 0 G 429 Methylobacter 0.00 4 0 G1 2635283 unclassified Methylobacter 0.00 3 3 S 2911520 Methylobacter sp. YRD-M1 0.00 1 1 S 2839024 Methylobacter sp. S3L5C 0.00 4 0 G 1295378 Methylogaea 0.00 4 4 S 1295382 Methylogaea oryzae 0.00 3 1 G 416 Methylomonas 0.00 1 1 S 2963939 Methylomonas rapida 0.00 1 1 S 3058963 Methylomonas montana 0.00 1 0 G 1808977 Candidatus Methylospira 0.00 1 1 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 G 3135206 Candidatus Methylocalor 0.00 1 1 S 3108543 Candidatus Methylocalor cossyra 0.00 1 0 F 1486721 Methylothermaceae 0.00 1 1 G 1486720 Methylomarinovum 0.04 69 0 O 1240482 Orbales 0.04 69 0 F 1240483 Orbaceae 0.04 69 0 G 2894762 Zophobihabitans 0.04 69 69 S 1635327 Zophobihabitans entericus 0.03 54 0 O 3085109 Thiohalobacterales 0.03 54 0 F 3085110 Thiohalobacteraceae 0.03 54 54 G 1273155 Thiohalobacter 0.03 52 0 O 72273 Thiotrichales 0.01 17 0 F 135617 Thiotrichaceae 0.01 17 16 G 1030 Thiothrix 0.00 1 1 S 525917 Thiothrix lacustris 0.01 17 0 F 2056687 Fastidiosibacteraceae 0.01 17 0 G 2056696 Cysteiniphilum 0.01 17 0 G1 2610889 unclassified Cysteiniphilum 0.01 17 17 S 2975055 Cysteiniphilum sp. QT6929 0.01 10 0 F 135616 Piscirickettsiaceae 0.01 10 10 G 34067 Cycloclasticus 0.00 8 1 F 34064 Francisellaceae 0.00 7 1 G 262 Francisella 0.00 6 0 S 263 Francisella tularensis 0.00 6 6 S1 119856 Francisella tularensis subsp. tularensis 0.03 50 0 O 135613 Chromatiales 0.02 34 2 F 1046 Chromatiaceae 0.01 14 14 G 1056 Thiocapsa 0.00 7 7 G 1227 Nitrosococcus 0.00 3 0 G 61593 Thiorhodovibrio 0.00 2 2 S 2952932 Thiorhodovibrio litoralis 0.00 1 1 S 631362 Thiorhodovibrio frisius 0.00 3 2 G 85072 Allochromatium 0.00 1 1 S 553982 Allochromatium tepidum 0.00 3 0 G 156885 Thioflavicoccus 0.00 3 0 S 80679 Thioflavicoccus mobilis 0.00 3 3 S1 765912 Thioflavicoccus mobilis 8321 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.01 14 0 F 72276 Ectothiorhodospiraceae 0.00 7 3 G 1335745 Spiribacter 0.00 3 0 S 1335746 Spiribacter salinus 0.00 3 3 S1 1260251 Spiribacter salinus M19-40 0.00 1 0 G1 2629425 unclassified Spiribacter 0.00 1 1 S 2666185 Spiribacter sp. 2438 0.00 5 3 G 106633 Thioalkalivibrio 0.00 2 2 S 106634 Thioalkalivibrio versutus 0.00 1 0 G 233099 Ectothiorhodosinus 0.00 1 1 S 233100 Ectothiorhodosinus mongolicus 0.00 1 0 G 1765964 Acidihalobacter 0.00 1 1 S 1765967 Acidihalobacter ferrooxydans 0.00 2 0 F 449719 Granulosicoccaceae 0.00 2 0 G 1860077 Sulfuriflexus 0.00 2 2 S 1811807 Sulfuriflexus mobilis 0.02 46 0 O 135624 Aeromonadales 0.02 44 1 F 84642 Aeromonadaceae 0.01 23 0 G 642 Aeromonas 0.01 21 21 S 654 Aeromonas veronii 0.00 2 2 S 644 Aeromonas hydrophila 0.01 11 0 G 225143 Oceanisphaera 0.01 11 11 S 1903694 Oceanisphaera avium 0.00 7 0 G 43947 Tolumonas 0.00 7 0 G1 263764 environmental samples 0.00 7 7 S 263765 uncultured Tolumonas sp. 0.00 2 0 G 2802288 Dongshaea 0.00 2 2 S 2047966 Dongshaea marina 0.00 2 0 F 83763 Succinivibrionaceae 0.00 2 0 G 83770 Succinivibrio 0.00 2 2 S 83771 Succinivibrio dextrinosolvens 0.02 30 2 O 135622 Alteromonadales 0.01 13 5 F 72275 Alteromonadaceae 0.00 5 0 F1 2903219 Alteromonas/Salinimonas group 0.00 5 0 G 226 Alteromonas 0.00 5 0 G1 2614992 unclassified Alteromonas 0.00 5 5 S 2267264 Alteromonas sp. RKMC-009 0.00 2 2 G 1858563 Alkalimarinus 0.00 1 0 G 1751872 Lacimicrobium 0.00 1 1 S 1526571 Lacimicrobium alkaliphilum 0.00 7 0 F 267888 Pseudoalteromonadaceae 0.00 3 0 G 53246 Pseudoalteromonas 0.00 3 0 G1 194690 unclassified Pseudoalteromonas 0.00 2 2 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 1 S 2785910 Pseudoalteromonas sp. A41-2 0.00 3 0 G 2834759 Flocculibacter 0.00 3 3 S 2744479 Flocculibacter collagenilyticus 0.00 1 0 G 907197 Psychrosphaera 0.00 1 1 S 2820710 Psychrosphaera ytuae 0.00 5 0 F 267890 Shewanellaceae 0.00 4 2 G 22 Shewanella 0.00 1 1 S 62322 Shewanella baltica 0.00 1 0 S 192073 Shewanella denitrificans 0.00 1 1 S1 318161 Shewanella denitrificans OS217 0.00 1 0 G 2547964 Parashewanella 0.00 1 1 S 342950 Parashewanella spongiae 0.00 2 0 F 267889 Colwelliaceae 0.00 2 0 G 1518149 Thalassotalea 0.00 1 1 S 1759089 Thalassotalea sediminis 0.00 1 0 G1 2614972 unclassified Thalassotalea 0.00 1 1 S 2769490 Thalassotalea sp. LPB0316 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 135575 Idiomarina 0.00 1 1 S 86102 Idiomarina abyssalis 0.01 28 0 O 135625 Pasteurellales 0.01 28 1 F 712 Pasteurellaceae 0.01 11 0 G 724 Haemophilus 0.00 9 9 S 727 Haemophilus influenzae 0.00 1 1 S 729 Haemophilus parainfluenzae 0.00 1 1 S 735 Haemophilus parahaemolyticus 0.00 7 0 G 745 Pasteurella 0.00 7 5 S 747 Pasteurella multocida 0.00 2 2 S1 115545 Pasteurella multocida subsp. septica 0.00 3 0 G 713 Actinobacillus 0.00 3 0 S 718 Actinobacillus equuli 0.00 3 3 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 0 G 1249016 Otariodibacter 0.00 2 2 S 1032623 Otariodibacter oris 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.00 1 0 G 2094023 Glaesserella 0.00 1 0 G1 2629322 unclassified Glaesserella 0.00 1 1 S 2030797 Glaesserella sp. 15-184 0.00 1 0 G 214906 Histophilus 0.00 1 1 S 731 Histophilus somni 0.00 1 0 G 155493 Gallibacterium 0.00 1 1 S 750 Gallibacterium anatis 0.01 23 0 O 1706369 Cellvibrionales 0.01 14 0 F 1706371 Cellvibrionaceae 0.01 12 12 G 2425 Teredinibacter 0.00 1 0 G 10 Cellvibrio 0.00 1 1 G1 2624793 unclassified Cellvibrio 0.00 1 0 G 1792291 Marinagarivorans 0.00 1 1 S 2721545 Marinagarivorans cellulosilyticus 0.00 5 5 F 1706372 Halieaceae 0.00 3 0 F 1706375 Spongiibacteraceae 0.00 3 0 G 1084558 Oceanicoccus 0.00 3 3 S 716816 Oceanicoccus sagamiensis 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 1 S 407164 Microbulbifer pacificus 0.01 15 0 O 118969 Legionellales 0.01 15 0 F 118968 Coxiellaceae 0.00 8 2 G 254245 Aquicella 0.00 6 6 S 254247 Aquicella siphonis 0.00 4 0 G 776 Coxiella 0.00 4 4 S 777 Coxiella burnetii 0.00 3 0 F1 134284 unclassified Coxiellaceae 0.00 3 3 S 1592897 Coxiella-like endosymbiont 0.01 15 1 C1 118884 Gammaproteobacteria incertae sedis 0.00 6 0 G 1076625 Candidatus Steffania 0.00 6 6 S 1076626 Candidatus Steffania adelgidicola 0.00 5 0 G 204619 Candidatus Nardonella 0.00 2 2 S 1971485 Candidatus Nardonella dryophthoridicola 0.00 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 1 S 1971488 endosymbiont of Pachyrhynchus infernalis 0.00 2 0 C2 32036 sulfur-oxidizing symbionts 0.00 2 0 G 2686004 Candidatus Vondammii 0.00 2 0 G1 2687300 unclassified Candidatus Vondammii 0.00 2 2 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 1 0 F 3119552 Candidatus Azoamicaceae 0.00 1 0 G 2817383 Candidatus Azoamicus 0.00 1 1 S 2652803 Candidatus Azoamicus ciliaticola 0.01 11 0 O 2975284 Candidatus Comchoanobacterales 0.01 11 0 F 2975285 Candidatus Comchoanobacteraceae 0.01 11 0 G 2975286 Candidatus Comchoanobacter 0.01 11 11 S 2919598 Candidatus Comchoanobacter bicostacola 0.00 4 0 O 3084968 Thiohalomonadales 0.00 4 0 F 3084969 Thiohalomonadaceae 0.00 4 0 G 2034504 Sulfurivermis 0.00 4 4 S 1972068 Sulfurivermis fontis 0.00 2 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 650377 endosymbiont of Euscepes postfasciatus 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.00 2 0 O 1692040 Acidiferrobacterales 0.00 2 2 F 1692041 Acidiferrobacteraceae 0.00 2 0 O 1775403 Nevskiales 0.00 2 0 F 568386 Nevskiaceae 0.00 2 0 G 413435 Solimonas 0.00 2 0 G1 2637139 unclassified Solimonas 0.00 2 2 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 1 G 261963 Kangiella 0.00 1 0 O 3060226 Steroidobacterales 0.00 1 0 F 2689614 Steroidobacteraceae 0.00 1 0 G 469322 Steroidobacter 0.00 1 1 S 465721 Steroidobacter denitrificans 22.89 43631 237 C 28211 Alphaproteobacteria 22.03 42008 121 O 204441 Rhodospirillales 21.88 41720 0 F 2844601 Stellaceae 21.88 41720 0 G 93 Stella 21.88 41720 41720 S 94 Stella humosa 0.08 147 0 F 433 Acetobacteraceae 0.07 142 0 G 512381 Acidisoma 0.07 142 0 G1 2634065 unclassified Acidisoma 0.07 142 142 S 3040935 Acidisoma sp. PAMC 29798 0.00 1 1 G 522 Acidiphilium 0.00 1 0 G 1706033 Sediminicoccus 0.00 1 1 S 1225128 Sediminicoccus rosea 0.00 1 0 G 2603324 Acidibrevibacterium 0.00 1 1 S 1969806 Acidibrevibacterium fodinaquatile 0.00 1 0 G 125216 Roseomonas 0.00 1 1 S 1750527 Roseomonas fluvialis 0.00 1 0 G 504465 Rhodovastum 0.00 1 1 S 504468 Rhodovastum atsumiense 0.01 17 0 F 41295 Rhodospirillaceae 0.01 15 0 G 111830 Defluviicoccus 0.01 15 15 S 111831 Defluviicoccus vanus 0.00 2 0 G 1612157 Pararhodospirillum 0.00 2 0 S 1084 Pararhodospirillum photometricum 0.00 2 2 S1 1150469 Pararhodospirillum photometricum DSM 122 0.00 3 0 F 2829815 Azospirillaceae 0.00 3 3 G 204447 Skermanella 0.43 828 0 O 204458 Caulobacterales 0.43 828 4 F 76892 Caulobacteraceae 0.43 812 2 G 41275 Brevundimonas 0.42 810 0 G1 2622653 unclassified Brevundimonas 0.42 793 793 S 2560058 Brevundimonas sp. Bb-A 0.01 17 17 S 2591463 Brevundimonas sp. M20 0.00 9 0 G 75 Caulobacter 0.00 7 0 G1 2648921 unclassified Caulobacter 0.00 7 7 S 3016000 Caulobacter sp. NIBR1757 0.00 1 1 S 69666 Caulobacter mirabilis 0.00 1 1 S 88688 Caulobacter segnis 0.00 3 1 G 20 Phenylobacterium 0.00 2 0 S 284016 Phenylobacterium zucineum 0.00 2 2 S1 450851 Phenylobacterium zucineum HLK1 0.11 211 13 O 204457 Sphingomonadales 0.09 181 2 F 41297 Sphingomonadaceae 0.08 162 13 G 165696 Novosphingobium 0.06 123 123 S 13688 Novosphingobium capsulatum 0.01 26 26 S 2728851 Novosphingobium olei 0.00 8 0 G 13687 Sphingomonas 0.00 2 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2937787 Sphingomonas sp. SUN039 0.00 1 1 S 745310 Sphingomonas sp. MM-1 0.00 2 2 S 2681549 Sphingomonas profundi 0.00 2 2 S 2698679 Sphingomonas changnyeongensis 0.00 1 1 S 13689 Sphingomonas paucimobilis 0.00 1 1 S 2319844 Sphingomonas paeninsulae 0.00 3 2 G 165695 Sphingobium 0.00 1 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 627192 Sphingobium sp. SYK-6 0.00 2 2 G 165697 Sphingopyxis 0.00 2 2 G 1227948 Sphingomicrobium 0.00 1 0 G 150203 Blastomonas 0.00 1 1 S 1867408 Blastomonas marina 0.00 1 0 G 1763827 Hankyongella 0.00 1 1 S 1763828 Hankyongella ginsenosidimutans 0.01 15 2 F 335929 Erythrobacteraceae 0.00 4 0 G 361177 Altererythrobacter 0.00 4 0 G1 2614945 unclassified Altererythrobacter 0.00 4 4 S 2060312 Altererythrobacter sp. B11 0.00 3 0 G 2800686 Tsuneonella 0.00 3 0 G1 2800703 unclassified Tsuneonella 0.00 3 3 S 3042152 Tsuneonella sp. CC-YZS046 0.00 3 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 2 0 G 1041 Erythrobacter 0.00 2 0 G1 2633097 unclassified Erythrobacter 0.00 2 2 S 2907154 Erythrobacter sp. SDW2 0.00 1 0 G 1111 Porphyrobacter 0.00 1 0 G1 2683265 unclassified Porphyrobacter 0.00 1 1 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 2 1 G 1855416 Qipengyuania 0.00 1 1 S 2867238 Qipengyuania psychrotolerans 0.00 1 0 G 1295327 Croceicoccus 0.00 1 1 S 1348774 Croceicoccus naphthovorans 0.00 1 0 F 2820280 Sphingosinicellaceae 0.00 1 1 G 1508451 Polymorphobacter 0.00 1 0 F 2844881 Zymomonadaceae 0.00 1 0 G 541 Zymomonas 0.00 1 1 S 542 Zymomonas mobilis 0.07 125 18 O 766 Rickettsiales 0.05 87 3 F 942 Anaplasmataceae 0.03 65 0 F1 952 Wolbachieae 0.03 65 22 G 953 Wolbachia 0.02 42 21 G1 2640676 unclassified Wolbachia 0.00 9 9 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.00 4 4 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.00 2 2 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.00 1 0 S 77038 Wolbachia endosymbiont of Drosophila simulans 0.00 1 1 S1 1236909 Wolbachia endosymbiont of Drosophila simulans wHa 0.00 1 1 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.00 1 1 S 3066210 Wolbachia endosymbiont (group A) of Ophion ellenae 0.00 1 1 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.00 1 1 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.00 1 1 S 215173 Wolbachia endosymbiont of Bemisia tabaci 0.00 1 1 S 1845000 Candidatus Wolbachia massiliensis 0.01 15 0 G 2883098 Candidatus Mesenet 0.01 15 14 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.00 3 2 G 33993 Neorickettsia 0.00 1 0 S 33994 Neorickettsia helminthoeca 0.00 1 1 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.00 1 0 G 943 Ehrlichia 0.00 1 1 G1 106178 canis group 0.01 18 0 F 775 Rickettsiaceae 0.01 18 1 F1 33988 Rickettsieae 0.01 15 0 G 780 Rickettsia 0.01 15 0 G1 114277 spotted fever group 0.01 15 0 S 781 Rickettsia conorii 0.01 15 15 S1 369822 Rickettsia conorii subsp. raoultii 0.00 2 0 G 2601645 Candidatus Sneabacter 0.00 2 2 S 2601646 Candidatus Sneabacter namystus 0.00 2 0 F 1328881 Candidatus Midichloriaceae 0.00 2 0 G 411566 Candidatus Midichloria 0.00 2 0 S 234827 Candidatus Midichloria mitochondrii 0.00 2 2 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.06 106 3 O 356 Hyphomicrobiales 0.02 31 3 F 41294 Nitrobacteraceae 0.01 27 1 G 374 Bradyrhizobium 0.01 24 24 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 1325111 Bradyrhizobium sp. CCBAU 53338 0.00 1 1 S 858423 Bradyrhizobium arachidis 0.00 1 0 G 1073 Rhodopseudomonas 0.00 1 1 S 1076 Rhodopseudomonas palustris 0.01 28 19 F 119045 Methylobacteriaceae 0.00 9 5 G 407 Methylobacterium 0.00 4 4 G1 2615210 unclassified Methylobacterium 0.01 24 1 F 82115 Rhizobiaceae 0.01 11 3 F1 227290 Rhizobium/Agrobacterium group 0.00 6 1 G 379 Rhizobium 0.00 5 0 S 384 Rhizobium leguminosarum 0.00 5 5 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 0 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 1 S 358 Agrobacterium tumefaciens 0.00 1 0 G 1612611 Pararhizobium 0.00 1 1 G1 2643050 unclassified Pararhizobium 0.00 6 0 F1 227292 Sinorhizobium/Ensifer group 0.00 6 0 G 28105 Sinorhizobium 0.00 5 5 S 110322 Sinorhizobium terangae 0.00 1 1 S 382 Sinorhizobium meliloti 0.00 5 4 G 34019 Liberibacter 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 1 G 323620 Shinella 0.01 10 0 F 118882 Brucellaceae 0.01 10 9 F1 2826938 Brucella/Ochrobactrum group 0.00 1 0 G 234 Brucella 0.00 1 0 G1 2632610 unclassified Brucella 0.00 1 1 S 2975050 Brucella sp. 1315 0.00 4 0 F 2843308 Pleomorphomonadaceae 0.00 3 0 G 261933 Pleomorphomonas 0.00 3 0 G1 442120 environmental samples 0.00 3 3 S 442121 uncultured Pleomorphomonas sp. 0.00 1 0 G 1572860 Hartmannibacter 0.00 1 1 S 1482074 Hartmannibacter diazotrophicus 0.00 3 0 F 45404 Beijerinckiaceae 0.00 3 2 G 1156568 Methylovirgula 0.00 1 0 G1 2640612 unclassified Methylovirgula 0.00 1 1 S 2293567 Methylovirgula sp. 4M-Z18 0.00 2 0 F 2831106 Devosiaceae 0.00 2 0 G 3064792 Mariluticola 0.00 2 2 S 2909283 Mariluticola halotolerans 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.04 85 22 O 204455 Rhodobacterales 0.03 51 0 F 31989 Paracoccaceae 0.02 42 19 G 265 Paracoccus 0.01 22 1 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 18 18 S 2654280 Paracoccus sp. SMMA_5_TC 0.00 3 3 S 2589076 Paracoccus sp. AK26 0.00 1 1 S 2812658 Paracoccus methylovorus 0.00 3 0 G 2816884 Qingshengfaniella 0.00 3 3 S 2599296 Qingshengfaniella alkalisoli 0.00 1 0 G 1060 Rhodobacter 0.00 1 0 G1 196779 unclassified Rhodobacter 0.00 1 1 S 2033869 Rhodobacter sp. CZR27 0.00 1 0 G 3029205 Abyssibius 0.00 1 1 S 2881234 Abyssibius alkaniclasticus 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 1 0 G 366614 Haematobacter 0.00 1 1 S 195105 Haematobacter massiliensis 0.00 1 0 G 2937410 Gymnodinialimonas 0.00 1 1 S 2856823 Gymnodinialimonas ceratoperidinii 0.00 1 0 G 2831955 Pikeienuella 0.00 1 1 S 2748098 Pikeienuella piscinae 0.01 12 0 F 2854170 Roseobacteraceae 0.00 6 1 G 60136 Sulfitobacter 0.00 4 4 S 83219 Sulfitobacter mediterraneus 0.00 1 0 G1 196795 unclassified Sulfitobacter 0.00 1 1 S 2867025 Sulfitobacter sp. W027 0.00 2 2 G 74030 Roseovarius 0.00 1 0 G 302485 Phaeobacter 0.00 1 1 S 221822 Phaeobacter inhibens 0.00 1 0 G 336277 Roseicyclus 0.00 1 1 S 2161673 Roseicyclus marinus 0.00 1 0 G 188905 Jannaschia 0.00 1 0 G1 2645469 unclassified Jannaschia 0.00 1 1 S 2867012 Jannaschia sp. W003 0.00 1 0 G 191028 Leisingera 0.00 1 0 G1 2614906 unclassified Leisingera 0.00 1 1 S 2867016 Leisingera sp. S132 0.01 17 0 O 1921002 Holosporales 0.01 16 0 F 44746 Holosporaceae 0.01 12 0 G 2654634 Candidatus Hydrogenosomobacter 0.01 12 12 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 4 0 G 2601651 Candidatus Nesciobacter 0.00 4 4 S 2601668 Candidatus Nesciobacter abundans 0.00 1 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 1 0 G 1521255 Candidatus Paracaedibacter 0.00 1 1 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 6 0 O 2800059 Maricaulales 0.00 6 2 F 2800061 Maricaulaceae 0.00 4 0 G 74317 Maricaulis 0.00 4 4 S 74318 Maricaulis maris 0.00 3 0 O 255473 Parvularculales 0.00 3 0 F 255474 Parvularculaceae 0.00 3 0 G 208215 Parvularcula 0.00 3 0 G1 2647080 unclassified Parvularcula 0.00 3 3 S 3067902 Parvularcula sp. IMCC14364 0.00 3 0 O 2800060 Hyphomonadales 0.00 3 0 F 69657 Hyphomonadaceae 0.00 3 3 G 85 Hyphomonas 0.00 1 0 O 54526 Candidatus Pelagibacterales 0.00 1 0 O1 2813274 Candidatus Pelagibacterales incertae sedis 0.00 1 0 G 2045213 Candidatus Fonsibacter 0.00 1 1 S 1925548 Candidatus Fonsibacter ubiquis 0.00 1 0 O 2066490 Emcibacterales 0.00 1 0 F 2066491 Emcibacteraceae 0.00 1 0 G 2943291 Pseudemcibacter 0.00 1 1 S 2857064 Pseudemcibacter aquimaris 0.21 398 64 C 28216 Betaproteobacteria 0.16 308 57 O 80840 Burkholderiales 0.07 140 0 F 119060 Burkholderiaceae 0.05 100 1 G 48736 Ralstonia 0.05 99 0 G1 3116862 Ralstonia solanacearum species complex 0.05 99 99 S 305 Ralstonia solanacearum 0.02 29 2 G 32008 Burkholderia 0.01 25 0 G1 87882 Burkholderia cepacia complex 0.01 22 22 S 152500 Burkholderia dolosa 0.00 1 1 S 60550 Burkholderia pyrrocinia 0.00 1 1 S 292 Burkholderia cepacia 0.00 1 1 S 87883 Burkholderia multivorans 0.00 2 0 G1 111527 pseudomallei group 0.00 2 0 S 28450 Burkholderia pseudomallei 0.00 1 1 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S1 557724 Burkholderia pseudomallei 576 0.00 9 0 G 1822464 Paraburkholderia 0.00 8 8 S 2571748 Paraburkholderia acidisoli 0.00 1 1 S 311231 Paraburkholderia ginsengisoli 0.00 2 0 G 106589 Cupriavidus 0.00 2 2 S 164546 Cupriavidus taiwanensis 0.02 37 2 F 80864 Comamonadaceae 0.01 17 17 G 80865 Delftia 0.00 6 0 G 219181 Ottowia 0.00 6 0 G1 2645081 unclassified Ottowia 0.00 6 6 S 1658672 Ottowia sp. oral taxon 894 0.00 5 0 G 3051137 Paracidovorax 0.00 5 5 S 80867 Paracidovorax avenae 0.00 3 0 G 238749 Diaphorobacter 0.00 2 0 G1 2649760 unclassified Diaphorobacter 0.00 2 2 S 2714925 Diaphorobacter sp. HDW4B 0.00 1 1 S 3036128 Diaphorobacter limosus 0.00 2 0 G 283 Comamonas 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2918299 Comamonas sp. B21-038 0.00 1 1 S 2743470 Comamonas antarctica 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 0 G1 2610897 unclassified Hydrogenophaga 0.00 1 1 S 2651974 Hydrogenophaga sp. BPS33 0.00 1 0 G 1649468 Melaminivora 0.00 1 1 S 2109913 Melaminivora suipulveris 0.02 34 0 F 506 Alcaligenaceae 0.02 29 0 G 290425 Advenella 0.02 29 29 S 1481665 Advenella alkanexedens 0.00 2 1 G 222 Achromobacter 0.00 1 1 G1 2626865 unclassified Achromobacter 0.00 1 1 G 517 Bordetella 0.00 1 1 G 90243 Oligella 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 G1 2626614 unclassified Pigmentiphaga 0.01 15 0 F 75682 Oxalobacteraceae 0.00 7 7 G 29580 Janthinobacterium 0.00 7 2 F1 2895353 Telluria group 0.00 5 3 G 149698 Massilia 0.00 1 1 S 457921 Massilia varians 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 1 0 G 963 Herbaspirillum 0.00 1 0 S 341045 Herbaspirillum hiltneri 0.00 1 1 S1 1262470 Herbaspirillum hiltneri N3 0.01 14 2 F 2975441 Sphaerotilaceae 0.00 7 7 G 93681 Roseateles 0.00 3 1 G 34102 Sphaerotilus 0.00 1 1 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 S 2914710 Sphaerotilus microaerophilus 0.00 2 0 G 1114981 Piscinibacter 0.00 2 2 S 946333 Piscinibacter gummiphilus 0.00 9 0 F 995019 Sutterellaceae 0.00 7 1 G 40544 Sutterella 0.00 3 3 S 40545 Sutterella wadsworthensis 0.00 3 3 S 2584944 Sutterella faecalis 0.00 1 0 G 1918598 Turicimonas 0.00 1 1 S 1796652 Turicimonas muris 0.00 1 0 G 1980697 Duodenibacillus 0.00 1 1 S 1852381 Duodenibacillus massiliensis 0.00 2 0 O1 224471 Burkholderiales genera incertae sedis 0.00 2 1 G 32012 Thiomonas 0.00 1 0 G1 2625466 unclassified Thiomonas 0.00 1 1 S 1050370 Thiomonas sp. X19 0.01 13 1 O 206351 Neisseriales 0.00 6 0 F 2897177 Chitinibacteraceae 0.00 4 0 G 240411 Chitinimonas 0.00 3 3 S 2594795 Chitinimonas arctica 0.00 1 1 S 356302 Chitinimonas koreensis 0.00 2 0 G 32014 Iodobacter 0.00 2 2 S 2496266 Iodobacter ciconiae 0.00 3 1 F 481 Neisseriaceae 0.00 1 0 G 482 Neisseria 0.00 1 1 S 495 Neisseria elongata 0.00 1 0 G 32257 Kingella 0.00 1 1 S 265175 Kingella potus 0.00 3 0 F 2897176 Aquaspirillaceae 0.00 3 0 G 168470 Laribacter 0.00 3 2 S 168471 Laribacter hongkongensis 0.00 1 1 S1 557598 Laribacter hongkongensis HLHK9 0.00 6 0 C1 119066 Betaproteobacteria incertae sedis 0.00 4 0 G 1301080 Candidatus Nasuia 0.00 4 4 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 2 1 G 33055 Candidatus Kinetoplastibacterium 0.00 1 1 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 5 1 O 32003 Nitrosomonadales 0.00 2 0 F 2008790 Thiobacillaceae 0.00 2 0 G 919 Thiobacillus 0.00 2 0 G1 2646513 unclassified Thiobacillus 0.00 2 2 S 3110231 Thiobacillus sp. SCUT-2 0.00 1 0 F 32011 Methylophilaceae 0.00 1 1 G 81682 Methylovorus 0.00 1 0 F 90627 Gallionellaceae 0.00 1 0 G 1443590 Ferriphaselus 0.00 1 1 S 1188319 Ferriphaselus amnicola 0.00 2 0 O 206389 Rhodocyclales 0.00 2 0 F 2008795 Azonexaceae 0.00 2 0 G 88875 Ferribacterium 0.00 2 2 S 76259 Ferribacterium limneticum 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 0 G 119977 Acidithiobacillus 0.00 1 0 G1 2614800 unclassified Acidithiobacillus 0.00 1 1 S 2994951 Acidithiobacillus sp. AMEEHan 29.58 56389 3920 D1 1783272 Terrabacteria group 24.99 47639 820 P 1239 Bacillota 23.70 45193 1069 C 91061 Bacilli 21.10 40231 1235 O 1385 Bacillales 16.69 31817 3325 F 186817 Bacillaceae 11.45 21838 2579 G 1386 Bacillus 8.58 16363 1270 G1 653685 Bacillus subtilis group 5.48 10442 100 G2 1938374 Bacillus amyloliquefaciens group 3.79 7234 7125 S 492670 Bacillus velezensis 0.04 67 67 S1 1385727 Bacillus velezensis NAU-B3 0.02 42 42 S1 1458206 Bacillus velezensis NJN-6 1.56 2976 2901 S 1390 Bacillus amyloliquefaciens 0.03 61 61 S1 1292358 Bacillus amyloliquefaciens KHG19 0.01 14 14 S1 1034836 Bacillus amyloliquefaciens XH7 0.07 132 132 S 659243 Bacillus siamensis 1.05 2006 1487 S 1423 Bacillus subtilis 0.21 405 321 S1 135461 Bacillus subtilis subsp. subtilis 0.03 53 53 S2 224308 Bacillus subtilis subsp. subtilis str. 168 0.02 31 31 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.06 114 114 S1 86029 Bacillus subtilis subsp. natto 0.66 1252 1161 S 1452 Bacillus atrophaeus 0.05 91 91 S1 1529886 Bacillus atrophaeus subsp. globigii 0.44 841 841 S 1648923 Bacillus paralicheniformis 0.11 208 208 S 72361 Bacillus vallismortis 0.08 160 0 G2 653388 Bacillus mojavensis subgroup 0.08 160 160 S 260554 Bacillus halotolerans 0.05 101 101 S 483913 Bacillus inaquosorum 0.02 39 39 S 1402 Bacillus licheniformis 0.02 35 17 S 96241 Bacillus spizizenii 0.01 18 18 S1 1052585 Bacillus spizizenii TU-B-10 0.00 9 9 S 2054641 Bacillus stercoris 0.56 1067 0 G1 1792192 Bacillus altitudinis complex 0.56 1067 1067 S 293387 Bacillus altitudinis 0.49 941 42 G1 86661 Bacillus cereus group 0.15 281 202 S 1428 Bacillus thuringiensis 0.04 74 74 S1 180850 Bacillus thuringiensis serovar indiana 0.00 3 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.00 3 3 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.00 2 2 S1 412694 Bacillus thuringiensis str. Al Hakam 0.12 222 136 S 1396 Bacillus cereus 0.03 65 65 S1 572264 Bacillus cereus 03BB102 0.01 12 12 S1 1003239 Bacillus cereus C1L 0.00 9 9 S1 1454382 Bacillus cereus D17 0.11 204 204 S 1392 Bacillus anthracis 0.05 99 99 S 2026186 Bacillus paranthracis 0.04 78 78 S 64104 Bacillus pseudomycoides 0.00 8 7 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.00 5 5 S 2026191 Bacillus luti 0.00 2 0 G2 2750818 unclassified Bacillus cereus group 0.00 2 2 S 1892404 Bacillus sp. ABP14 0.24 467 1 G1 185979 unclassified Bacillus (in: firmicutes) 0.12 229 229 S 2841656 Bacillus sp. ZHX3 0.07 126 126 S 2789210 Bacillus sp. A1(2020) 0.02 38 38 S 467262 Bacillus sp. T3 0.02 29 29 S 2093834 Bacillus sp. ZY-1-1 0.01 15 15 S 3229854 Bacillus sp. Bos-x628 0.01 15 15 S 666686 Bacillus sp. 1NLA3E 0.00 3 3 S 3077323 Bacillus sp. SI2 0.00 3 3 S 3117553 Bacillus sp. MT(2024) 0.00 2 2 S 2709784 Bacillus sp. KH172YL63 0.00 2 2 S 2874284 Bacillus sp. CRB-7 0.00 2 2 S 563169 Bacillus sp. SJ-10 0.00 1 1 S 1806216 Bacillus sp. RZ2MS9 0.00 1 1 S 2049935 Bacillus sp. Lzh-5 0.18 338 338 S 1408 Bacillus pumilus 0.03 56 56 S 561879 Bacillus safensis 0.01 12 12 S 1664069 Bacillus glycinifermentans 0.00 8 8 S 2672567 Bacillus aquiflavi 0.00 3 3 S 2728853 Bacillus fonticola 0.00 2 2 S 1983719 Bacillus shivajii 0.00 1 1 S 86663 Bacillus carboniphilus 0.00 1 1 S 1547283 Bacillus weihaiensis 2.22 4227 23 G 84406 Virgibacillus 2.20 4190 4190 S 447199 Virgibacillus salarius 0.00 5 5 S 1482 Virgibacillus halodenitrificans 0.00 5 5 S 1216297 Virgibacillus natechei 0.00 4 0 G1 2620237 unclassified Virgibacillus 0.00 3 3 S 2419841 Virgibacillus sp. Bac330 0.00 1 1 S 2831673 Virgibacillus sp. NKC19-16 0.18 339 274 G 2675233 Metabacillus 0.03 65 56 G1 2675274 unclassified Metabacillus 0.00 9 9 S 2897333 Metabacillus sp. B2-18 0.16 299 21 G 2800373 Priestia 0.13 255 233 S 1404 Priestia megaterium 0.01 22 22 S1 1006007 Priestia megaterium WSH-002 0.01 20 20 S 412384 Priestia aryabhattai 0.00 3 3 S 1402861 Priestia filamentosa 0.14 271 0 G 2675230 Cytobacillus 0.11 217 217 S 1399 Cytobacillus firmus 0.03 54 54 S 665099 Cytobacillus oceanisediminis 0.11 219 4 G 400634 Lysinibacillus 0.07 126 0 G1 2636778 unclassified Lysinibacillus 0.07 124 124 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 1 1 S 2792480 Lysinibacillus sp. JNUCC-52 0.00 1 1 S 2921393 Lysinibacillus sp. FSL H8-0500 0.02 39 39 S 2086577 Lysinibacillus timonensis 0.01 22 22 S 28031 Lysinibacillus fusiformis 0.01 15 15 S 2590012 Lysinibacillus agricola 0.01 13 13 S 1421 Lysinibacillus sphaericus 0.11 213 0 G 150247 Anoxybacillus 0.10 183 183 G1 2639704 unclassified Anoxybacillus 0.01 18 0 S 33934 Anoxybacillus flavithermus 0.01 18 18 S1 491915 Anoxybacillus flavithermus WK1 0.01 12 12 S 247480 Anoxybacillus caldiproteolyticus 0.07 126 0 G 2675234 Alkalihalobacillus 0.07 126 0 G1 2675276 unclassified Alkalihalobacillus 0.07 125 125 S 2924032 Alkalihalobacillus sp. LMS39 0.00 1 1 S 2926399 Alkalihalobacillus sp. AL-G 0.05 103 0 G 2785518 Radiobacillus 0.05 103 103 S 2594883 Radiobacillus deserti 0.05 92 0 G 2675229 Peribacillus 0.04 77 77 S 1407 Peribacillus psychrosaccharolyticus 0.00 9 9 S 264697 Peribacillus muralis 0.00 6 6 S 450367 Peribacillus frigoritolerans 0.04 83 0 G 175304 Lentibacillus 0.03 50 50 S 1472767 Lentibacillus amyloliquefaciens 0.01 22 0 G1 2614679 unclassified Lentibacillus 0.01 22 22 S 2518176 Lentibacillus sp. CBA3610 0.01 11 11 S 2911514 Lentibacillus daqui 0.04 72 17 G 2685905 Salicibibacter 0.02 47 47 S 2743001 Salicibibacter cibi 0.00 8 8 S 2099786 Salicibibacter kimchii 0.03 65 4 G 129337 Geobacillus 0.01 28 28 S 1921421 Geobacillus genomosp. 3 0.01 16 16 S 860353 Geobacillus proteiniphilus 0.00 7 0 G1 2642459 unclassified Geobacillus 0.00 7 7 S 1233873 Geobacillus sp. GHH01 0.00 5 0 S 33940 Geobacillus thermodenitrificans 0.00 5 5 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 5 5 S 129338 Geobacillus subterraneus 0.03 56 0 G 1884449 Salipaludibacillus 0.03 56 0 G1 2635229 unclassified Salipaludibacillus 0.03 56 56 S 2924031 Salipaludibacillus sp. LMS25 0.02 47 2 G 3033930 Fervidibacillus 0.02 43 43 S 2980026 Fervidibacillus albus 0.00 2 2 S 2980027 Fervidibacillus halotolerans 0.02 47 0 G 2837508 Rossellomorea 0.02 36 36 S 218284 Rossellomorea vietnamensis 0.00 8 8 S 189381 Rossellomorea marisflavi 0.00 3 0 G1 2837526 unclassified Rossellomorea 0.00 3 3 S 2963940 Rossellomorea sp. KS-H15a 0.02 46 2 G 351195 Salimicrobium 0.02 41 41 S 1230341 Salimicrobium jeotgali 0.00 3 0 G1 2619739 unclassified Salimicrobium 0.00 3 3 S 3095364 Salimicrobium sp. PL1-032A 0.02 42 1 G 45667 Halobacillus 0.02 30 30 S 2932258 Halobacillus shinanisalinarum 0.00 6 6 S 45668 Halobacillus litoralis 0.00 3 3 S 2932257 Halobacillus salinarum 0.00 2 2 S 1570 Halobacillus halophilus 0.02 32 6 G 2837504 Heyndrickxia 0.01 22 22 S 1398 Heyndrickxia coagulans 0.00 4 4 S 38875 Heyndrickxia oleronia 0.02 32 0 G 379065 Caldalkalibacillus 0.02 32 0 S 296745 Caldalkalibacillus thermarum 0.02 32 32 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.01 26 0 G 2675232 Neobacillus 0.01 18 0 G1 2675272 unclassified Neobacillus 0.01 13 13 S 3070683 Neobacillus sp. OS1-33 0.00 5 5 S 3070682 Neobacillus sp. OS1-32 0.00 8 8 S 1193713 Neobacillus mesonae 0.01 23 21 G 2893057 Shouchella 0.00 1 1 S 79880 Shouchella clausii 0.00 1 0 S 300825 Shouchella lehensis 0.00 1 1 S1 1246626 Shouchella lehensis G1 0.01 22 0 G 289201 Pontibacillus 0.01 22 22 S 265426 Pontibacillus chungwhensis 0.01 21 0 G 2837506 Niallia 0.01 14 0 G1 2837522 unclassified Niallia 0.01 14 14 S 2962858 Niallia sp. RD1 0.00 7 7 S 1397 Niallia circulans 0.01 20 0 G 2005375 Alkalicoccus 0.01 20 20 S 1667239 Alkalicoccus halolimnae 0.01 18 1 G 2675231 Mesobacillus 0.01 17 17 S 285983 Mesobacillus subterraneus 0.01 17 14 G 1906945 Parageobacillus 0.00 3 0 S 1426 Parageobacillus thermoglucosidasius 0.00 3 3 S1 634956 Parageobacillus thermoglucosidasius C56-YS93 0.01 16 0 G 459532 Terribacillus 0.01 16 0 G1 2636508 unclassified Terribacillus 0.01 14 14 S 2921447 Terribacillus sp. FSL K6-0262 0.00 2 2 S 2850441 Terribacillus sp. DMT04 0.01 15 0 G 200903 Paraliobacillus 0.01 15 15 S 2213194 Paraliobacillus zengyii 0.01 15 0 G 2893056 Halalkalibacter 0.01 15 15 S 199441 Halalkalibacter krulwichiae 0.01 13 13 G 74385 Gracilibacillus 0.01 12 0 G 1329200 Fictibacillus 0.01 12 0 G1 2644029 unclassified Fictibacillus 0.01 12 12 S 2991053 Fictibacillus sp. KU28468 0.00 8 0 G 482460 Sediminibacillus 0.00 8 8 S 2729421 Sediminibacillus dalangtanensis 0.00 7 6 G 182709 Oceanobacillus 0.00 1 1 S 2052660 Oceanobacillus zhaokaii 0.00 4 0 G 2893060 Alkalihalophilus 0.00 4 4 S 79885 Alkalihalophilus pseudofirmus 0.00 2 0 G 1400133 Allobacillus 0.00 2 2 S 570278 Allobacillus halotolerans 0.00 2 2 G 1055323 Aeribacillus 0.00 1 0 G 2837485 Evansella 0.00 1 0 G1 2837486 unclassified Evansella 0.00 1 1 S 2924033 Evansella sp. LMS18 0.00 1 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 1 0 S 86665 Halalkalibacterium halodurans 0.00 1 1 S1 272558 Halalkalibacterium halodurans C-125 3.25 6191 11 F 90964 Staphylococcaceae 3.22 6137 87 G 1279 Staphylococcus 2.92 5563 5558 S 1280 Staphylococcus aureus 0.00 5 5 S1 1229492 Staphylococcus aureus 08BA02176 0.11 215 215 S 1282 Staphylococcus epidermidis 0.05 104 104 S 70255 Staphylococcus condimenti 0.02 47 47 S 28035 Staphylococcus lugdunensis 0.02 40 40 S 2044912 Staphylococcus debuckii 0.02 33 0 G1 2815305 Staphylococcus intermedius group 0.02 33 33 S 283734 Staphylococcus pseudintermedius 0.01 20 20 S 29378 Staphylococcus arlettae 0.00 7 7 S 1283 Staphylococcus haemolyticus 0.00 4 4 S 1286 Staphylococcus simulans 0.00 4 4 S 1290 Staphylococcus hominis 0.00 4 4 S 1292 Staphylococcus warneri 0.00 3 3 S 29382 Staphylococcus cohnii 0.00 2 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2989772 Staphylococcus sp. IVB6246 0.00 1 1 S 1715860 Staphylococcus sp. AntiMn-1 0.00 1 0 S 29388 Staphylococcus capitis 0.00 1 1 S1 74703 Staphylococcus capitis subsp. urealyticus 0.00 1 1 S 246432 Staphylococcus equorum 0.00 1 1 S 201828 Staphylococcus casei 0.00 1 1 S 170573 Staphylococcus pettenkoferi 0.02 33 0 G 45669 Salinicoccus 0.02 33 0 G1 2628837 unclassified Salinicoccus 0.02 33 33 S 3136731 Salinicoccus sp. Bachu38 0.00 7 6 G 227979 Jeotgalicoccus 0.00 1 0 G1 2630462 unclassified Jeotgalicoccus 0.00 1 1 S 946435 Jeotgalicoccus sp. ATCC 8456 0.00 3 1 G 2803850 Mammaliicoccus 0.00 2 2 S 1296 Mammaliicoccus sciuri 0.27 524 0 F 186822 Paenibacillaceae 0.27 507 78 G 44249 Paenibacillus 0.11 206 195 S 1406 Paenibacillus polymyxa 0.00 8 8 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 3 3 S1 886882 Paenibacillus polymyxa SC2 0.07 139 1 G1 185978 unclassified Paenibacillus 0.04 67 67 S 2921654 Paenibacillus sp. FSL R5-0701 0.02 32 32 S 715179 Paenibacillus sp. sptzw28 0.01 15 15 S 2741301 Paenibacillus sp. URB8-2 0.01 13 13 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 4 4 S 1906272 Paenibacillus sp. JZ16 0.00 3 3 S 2211212 Paenibacillus sp. DCT19 0.00 2 2 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 1 1 S 2954506 Paenibacillus sp. FSL H3-0469 0.00 1 1 S 2921361 Paenibacillus sp. FSL E2-0178 0.01 17 17 S 1451 Paenibacillus amylolyticus 0.01 10 10 S 49283 Paenibacillus thiaminolyticus 0.00 9 9 S 1462996 Paenibacillus yonginensis 0.00 9 9 S 61624 Paenibacillus mucilaginosus 0.00 8 8 S 1178515 Paenibacillus swuensis 0.00 8 0 S 1464 Paenibacillus larvae 0.00 8 8 S1 147375 Paenibacillus larvae subsp. larvae 0.00 7 7 S 2704463 Paenibacillus rhizovicinus 0.00 5 5 S 414771 Paenibacillus donghaensis 0.00 2 2 S 1333845 Paenibacillus sophorae 0.00 2 2 S 253703 Paenibacillus antarcticus 0.00 2 2 S 682956 Paenibacillus jilunlii 0.00 2 2 S 375489 Paenibacillus cellulosilyticus 0.00 1 1 S 2975482 Paenibacillus andongensis 0.00 1 1 S 2020716 Paenibacillus konkukensis 0.00 1 1 S 2509456 Paenibacillus protaetiae 0.00 9 2 G 55080 Brevibacillus 0.00 5 5 S 2496837 Brevibacillus marinus 0.00 1 1 S 1465 Brevibacillus laterosporus 0.00 1 1 S 45462 Brevibacillus borstelensis 0.00 4 0 F1 85151 Aneurinibacillus group 0.00 4 1 G 55079 Aneurinibacillus 0.00 3 3 S 1500254 Aneurinibacillus soli 0.00 4 1 G 329857 Cohnella 0.00 2 2 S 2507935 Cohnella abietis 0.00 1 1 S 2674991 Cohnella candidum 0.08 148 0 F 186820 Listeriaceae 0.06 111 5 G 1637 Listeria 0.03 56 56 S 1639 Listeria monocytogenes 0.02 34 0 G1 2642072 unclassified Listeria 0.02 34 34 S 1844999 Listeria sp. PSOL-1 0.01 16 0 S 1638 Listeria ivanovii 0.01 16 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.01 16 16 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.02 37 0 G 2755 Brochothrix 0.02 37 37 S 2756 Brochothrix thermosphacta 0.07 135 7 F 186818 Planococcaceae 0.03 53 0 G 160795 Ureibacillus 0.03 53 53 S 367743 Ureibacillus thermophilus 0.01 26 7 G 1569 Sporosarcina 0.01 19 0 G1 2647733 unclassified Sporosarcina 0.01 17 17 S 2810514 Sporosarcina sp. Marseille-Q4063 0.00 2 2 S 1930546 Sporosarcina sp. P37 0.01 22 0 G 1649 Kurthia 0.01 22 0 G1 2644826 unclassified Kurthia 0.01 22 22 S 3049086 Kurthia sp. YJT4 0.01 18 2 G 1372 Planococcus 0.01 16 16 S 414778 Planococcus donghaensis 0.00 5 0 G 648800 Solibacillus 0.00 5 0 S 76853 Solibacillus silvestris 0.00 5 5 S1 1002809 Solibacillus silvestris StLB046 0.00 4 0 G 651660 Paenisporosarcina 0.00 4 4 S 2320858 Paenisporosarcina cavernae 0.05 90 0 F 186821 Sporolactobacillaceae 0.05 90 14 G 2077 Sporolactobacillus 0.04 74 74 S 269673 Sporolactobacillus terrae 0.00 2 0 G1 2628533 unclassified Sporolactobacillus 0.00 2 2 S 3160863 Sporolactobacillus sp. Y61 0.02 32 20 F 186824 Thermoactinomycetaceae 0.01 12 0 G 1677050 Novibacillus 0.01 12 12 S 1471761 Novibacillus thermophilus 0.02 31 0 O1 539002 Bacillales incertae sedis 0.02 31 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.02 31 3 G 33986 Exiguobacterium 0.01 25 0 G1 2644629 unclassified Exiguobacterium 0.01 24 24 S 360911 Exiguobacterium sp. AT1b 0.00 1 1 S 2829816 Exiguobacterium sp. PFWT01 0.00 2 2 S 1428684 Exiguobacterium alkaliphilum 0.00 1 0 S 132920 Exiguobacterium antarcticum 0.00 1 1 S1 1087448 Exiguobacterium antarcticum B7 0.01 18 0 F 186823 Alicyclobacillaceae 0.01 15 7 G 432330 Tumebacillus 0.00 8 8 S 1903704 Tumebacillus avium 0.00 2 0 G 29330 Alicyclobacillus 0.00 1 1 S 1475485 Alicyclobacillus dauci 0.00 1 1 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 G 1129704 Kyrpidia 0.00 6 0 F 3076164 Abyssicoccaceae 0.00 6 0 G 1955413 Abyssicoccus 0.00 6 6 S 1817405 Abyssicoccus albus 0.00 4 0 F 539738 Gemellaceae 0.00 4 4 G 1378 Gemella 2.04 3893 106 O 186826 Lactobacillales 1.15 2196 0 F 81852 Enterococcaceae 1.12 2142 7 G 1350 Enterococcus 1.10 2096 2083 S 1351 Enterococcus faecalis 0.01 13 13 S1 1201292 Enterococcus faecalis ATCC 29212 0.02 33 33 S 1352 Enterococcus faecium 0.00 6 4 S 1354 Enterococcus hirae 0.00 2 2 S1 768486 Enterococcus hirae ATCC 9790 0.03 48 1 G 51668 Tetragenococcus 0.02 40 40 S 526944 Tetragenococcus osmophilus 0.00 6 6 S 290335 Tetragenococcus koreensis 0.00 1 1 S 51669 Tetragenococcus halophilus 0.00 6 6 G 2737 Vagococcus 0.51 965 0 F 1300 Streptococcaceae 0.46 883 7 G 1301 Streptococcus 0.44 846 827 S 1308 Streptococcus thermophilus 0.01 18 18 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 767463 Streptococcus thermophilus ND03 0.01 16 16 S 1811193 Streptococcus pantholopis 0.00 8 8 S 1314 Streptococcus pyogenes 0.00 3 0 G1 671232 Streptococcus anginosus group 0.00 2 2 S 1328 Streptococcus anginosus 0.00 1 1 S 76860 Streptococcus constellatus 0.00 2 0 S 1313 Streptococcus pneumoniae 0.00 2 2 S1 869311 Streptococcus pneumoniae SPN032672 0.00 1 0 G1 2608887 unclassified Streptococcus 0.00 1 1 S 3098075 Streptococcus sp. S1 0.03 55 0 G 1930830 Floricoccus 0.03 55 55 S 1859475 Floricoccus penangensis 0.01 27 26 G 1357 Lactococcus 0.00 1 0 G1 2643510 unclassified Lactococcus 0.00 1 1 S 2879149 Lactococcus sp. NH2-7C 0.23 446 76 F 33958 Lactobacillaceae 0.07 138 3 G 2759736 Lacticaseibacillus 0.06 117 117 S 3025672 Lacticaseibacillus pabuli 0.01 15 15 S 47715 Lacticaseibacillus rhamnosus 0.00 3 3 S 1597 Lacticaseibacillus paracasei 0.03 55 25 G 1578 Lactobacillus 0.01 15 15 S 47770 Lactobacillus crispatus 0.00 6 6 S 1587 Lactobacillus helveticus 0.00 5 1 S 1584 Lactobacillus delbrueckii 0.00 4 0 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 4 4 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 2 2 G1 2620435 unclassified Lactobacillus 0.00 2 2 S 33959 Lactobacillus johnsonii 0.01 21 0 G 2767842 Lactiplantibacillus 0.01 21 21 S 1590 Lactiplantibacillus plantarum 0.01 20 2 G 2742598 Limosilactobacillus 0.01 17 17 S 1613 Limosilactobacillus fermentum 0.00 1 1 S 1598 Limosilactobacillus reuteri 0.01 18 18 G 2767893 Lentilactobacillus 0.01 16 16 G 2767889 Loigolactobacillus 0.01 15 15 G 1243 Leuconostoc 0.01 14 0 G 2767885 Latilactobacillus 0.01 14 14 S 1599 Latilactobacillus sakei 0.01 13 0 G 2767874 Acetilactobacillus 0.01 13 13 S 1720083 Acetilactobacillus jinshanensis 0.01 12 3 G 2767887 Ligilactobacillus 0.00 8 8 S 1624 Ligilactobacillus salivarius 0.00 1 1 S 1623 Ligilactobacillus ruminis 0.01 11 1 G 2767881 Fructilactobacillus 0.01 10 10 S 1625 Fructilactobacillus sanfranciscensis 0.00 8 6 G 1253 Pediococcus 0.00 1 1 S 51663 Pediococcus damnosus 0.00 1 1 S 480391 Pediococcus argentinicus 0.00 6 6 G 2767877 Apilactobacillus 0.00 6 1 G 46255 Weissella 0.00 4 4 S 1249 Weissella paramesenteroides 0.00 1 1 S 759620 Weissella ceti 0.00 5 1 G 2767886 Levilactobacillus 0.00 3 3 S 1580 Levilactobacillus brevis 0.00 1 1 S 2292255 Levilactobacillus suantsaii 0.00 5 5 G 46254 Oenococcus 0.00 5 2 G 2767890 Paucilactobacillus 0.00 2 2 S 1296540 Paucilactobacillus nenjiangensis 0.00 1 0 S 293371 Paucilactobacillus oligofermentans 0.00 1 1 S1 1423778 Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 0.00 1 0 G 2767879 Companilactobacillus 0.00 1 0 S 1602 Companilactobacillus alimentarius 0.00 1 1 S1 1423720 Companilactobacillus alimentarius DSM 20249 0.00 1 1 G 2767878 Bombilactobacillus 0.06 112 15 F 186827 Aerococcaceae 0.04 72 34 G 1375 Aerococcus 0.02 31 31 S 87541 Aerococcus christensenii 0.00 7 7 S 1376 Aerococcus urinae 0.01 17 0 G 2862144 Ruoffia 0.01 17 17 S 87458 Ruoffia tabacinasalis 0.00 6 0 G 13075 Globicatella 0.00 6 6 S 13076 Globicatella sanguinis 0.00 1 0 G 89092 Ignavigranum 0.00 1 1 S 89093 Ignavigranum ruoffiae 0.00 1 0 G 2761542 Fundicoccus 0.00 1 1 S 2969821 Fundicoccus culcitae 0.04 68 43 F 186828 Carnobacteriaceae 0.01 12 0 G 117563 Granulicatella 0.01 10 10 S 46124 Granulicatella adiacens 0.00 2 2 S 137732 Granulicatella elegans 0.00 8 2 G 29393 Dolosigranulum 0.00 6 0 G1 2622049 unclassified Dolosigranulum 0.00 6 6 S 3110289 Dolosigranulum sp. MSK312 0.00 4 0 G 82800 Desemzia 0.00 4 4 S 82801 Desemzia incerta 0.00 1 1 G 2747 Carnobacterium 0.73 1398 23 C 186801 Clostridia 0.34 651 66 O 186802 Eubacteriales 0.09 172 0 F 216572 Oscillospiraceae 0.07 136 0 G 1263 Ruminococcus 0.07 131 131 G1 2608920 unclassified Ruminococcus 0.00 3 3 S 2564099 Ruminococcus bovis 0.00 2 2 S 1161942 Ruminococcus champanellensis 0.01 22 14 G 216851 Faecalibacterium 0.00 8 8 S 853 Faecalibacterium prausnitzii 0.00 4 3 G 292632 Subdoligranulum 0.00 1 1 S 214851 Subdoligranulum variabile 0.00 4 1 G 2892396 Vescimonas 0.00 2 2 S 2714355 Vescimonas coprocola 0.00 1 1 S 2714353 Vescimonas fastidiosa 0.00 2 0 G 2842531 Solibaculum 0.00 2 2 S 2780922 Solibaculum mannosilyticum 0.00 1 0 G 35829 Acetivibrio 0.00 1 1 S 1677857 Acetivibrio saccincola 0.00 1 0 G 459786 Oscillibacter 0.00 1 1 S 2763056 Oscillibacter hominis 0.00 1 0 G 946234 Flavonifractor 0.00 1 1 S 292800 Flavonifractor plautii 0.00 1 0 G 1637257 Mageeibacillus 0.00 1 0 S 884684 Mageeibacillus indolicus 0.00 1 1 S1 699246 Mageeibacillus indolicus UPII9-5 0.08 147 131 F 31984 Heliobacteriaceae 0.01 14 0 G 79598 Heliorestis 0.01 14 14 S 356322 Heliorestis convoluta 0.00 2 0 G 2831443 Heliomicrobium 0.00 2 0 S 35701 Heliomicrobium modesticaldum 0.00 2 2 S1 498761 Heliomicrobium modesticaldum Ice1 0.08 144 2 F 31979 Clostridiaceae 0.07 138 28 G 1485 Clostridium 0.03 53 10 S 1491 Clostridium botulinum 0.02 43 43 S1 1408283 Clostridium botulinum CDC_1436 0.02 29 15 S 1502 Clostridium perfringens 0.01 14 14 S1 107819 Clostridium perfringens D 0.01 10 10 S 36839 Clostridium felsineum 0.00 7 0 S 1561 Clostridium baratii 0.00 7 7 S1 1415775 Clostridium baratii str. Sullivan 0.00 7 7 S 1520 Clostridium beijerinckii 0.00 2 2 S 36845 Clostridium intestinale 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 84022 Clostridium aceticum 0.00 4 0 G 1155385 Proteiniclasticum 0.00 4 0 G1 2630696 unclassified Proteiniclasticum 0.00 4 4 S 3036945 Proteiniclasticum sp. QWL-01 0.02 37 35 F 186807 Peptococcaceae 0.00 1 0 G 51514 Dehalobacterium 0.00 1 1 S 51515 Dehalobacterium formicoaceticum 0.00 1 1 G 2916693 Desulforamulus 0.02 34 0 O1 538999 Eubacteriales incertae sedis 0.02 31 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.02 31 31 G 73918 Thermaerobacter 0.00 2 1 G 1686313 Fenollaria 0.00 1 1 S 938288 Fenollaria massiliensis 0.00 1 0 G 1392389 Intestinimonas 0.00 1 1 S 1297617 Intestinimonas butyriciproducens 0.02 33 0 F 3046368 Aristaeellaceae 0.02 33 33 G 3046369 Aristaeella 0.00 7 4 F 186806 Eubacteriaceae 0.00 3 0 G 1730 Eubacterium 0.00 3 3 S 1736 Eubacterium limosum 0.00 4 0 F 1491775 Proteinivoraceae 0.00 4 0 G 2838170 Alkalicella 0.00 4 4 S 2731377 Alkalicella caledoniensis 0.00 2 0 F 2867375 Desulfallaceae 0.00 2 0 G 2867376 Desulfoscipio 0.00 2 0 S 102134 Desulfoscipio gibsoniae 0.00 2 2 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 2 0 F 3082771 Acutalibacteraceae 0.00 2 2 G 1738645 Caproiciproducens 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 0 G 36853 Desulfitobacterium 0.00 1 0 S 142877 Desulfitobacterium metallireducens 0.00 1 1 S1 871968 Desulfitobacterium metallireducens DSM 15288 0.00 1 0 F 2937910 Desulfotomaculaceae 0.00 1 0 G 1562 Desulfotomaculum 0.00 1 0 S 1565 Desulfotomaculum nigrificans 0.00 1 1 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 1 0 F 68298 Syntrophomonadaceae 0.00 1 0 G 129001 Syntrophothermus 0.00 1 0 S 86170 Syntrophothermus lipocalidus 0.00 1 1 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.28 543 0 O 53433 Halanaerobiales 0.28 539 0 F 53434 Halobacteroidaceae 0.28 537 0 G 42417 Halobacteroides 0.28 537 0 S 42422 Halobacteroides halobius 0.28 537 537 S1 748449 Halobacteroides halobius DSM 5150 0.00 2 0 G 28186 Acetohalobium 0.00 2 0 S 28187 Acetohalobium arabaticum 0.00 2 2 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 2 2 F 972 Halanaerobiaceae 0.00 2 0 O1 387655 Halanaerobiales incertae sedis 0.00 2 0 G 1769008 Anoxybacter 0.00 2 2 S 1323375 Anoxybacter fermentans 0.06 123 0 O 3082720 Peptostreptococcales 0.06 108 0 F 3030910 Anaerovoracaceae 0.06 106 106 G 86331 Mogibacterium 0.00 2 0 G 1926556 Emergencia 0.00 2 0 G1 2642996 unclassified Emergencia 0.00 2 2 S 3114296 Emergencia sp. JLR.KK010 0.01 13 3 F 186804 Peptostreptococcaceae 0.00 4 0 G 1501226 Romboutsia 0.00 4 0 G1 2626894 unclassified Romboutsia 0.00 4 4 S 2708053 Romboutsia sp. 13368 0.00 3 0 G 1257 Peptostreptococcus 0.00 3 3 S 3003601 Peptostreptococcus equinus 0.00 2 0 G 1870884 Clostridioides 0.00 2 2 S 1496 Clostridioides difficile 0.00 1 0 G 1849822 Paraclostridium 0.00 1 1 S 1505 Paraclostridium sordellii 0.00 2 0 F 3118656 Natronincolaceae 0.00 2 0 G 1890059 Serpentinicella 0.00 2 2 S 1734049 Serpentinicella alkaliphila 0.03 52 1 O 3085636 Lachnospirales 0.03 50 2 F 186803 Lachnospiraceae 0.01 22 0 G 2383 Candidatus Epulonipiscium 0.01 22 22 S 420336 Candidatus Epulonipiscium viviparus 0.00 7 0 G 572511 Blautia 0.00 4 0 S 53443 Blautia hydrogenotrophica 0.00 4 4 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 3 0 G1 2648079 unclassified Blautia 0.00 3 3 S 2479767 Blautia sp. SC05B48 0.00 6 1 G 1164882 Lachnoanaerobaculum 0.00 5 5 S 2490855 Lachnoanaerobaculum gingivalis 0.00 5 4 G 841 Roseburia 0.00 1 1 S 166486 Roseburia intestinalis 0.00 2 0 G 2163168 Kineothrix 0.00 2 0 G1 2625420 unclassified Kineothrix 0.00 1 1 S 3070215 Kineothrix sp. MB12-C1 0.00 1 1 S 3123317 Kineothrix sp. IPX-CK 0.00 2 0 G 207244 Anaerostipes 0.00 2 2 S 1229621 Anaerostipes rhamnosivorans 0.00 2 0 G 2944195 Qiania 0.00 2 2 S 2763669 Qiania dongpingensis 0.00 1 0 G 1766253 Agathobacter 0.00 1 1 S 39491 Agathobacter rectalis 0.00 1 0 G 2944193 Simiaoa 0.00 1 1 S 2763672 Simiaoa sunii 0.00 1 0 F 3018741 Cellulosilyticaceae 0.00 1 1 G 698776 Cellulosilyticum 0.00 5 0 O 68295 Thermoanaerobacterales 0.00 5 1 F 186814 Thermoanaerobacteraceae 0.00 4 0 G 140458 Thermacetogenium 0.00 4 0 S 85874 Thermacetogenium phaeum 0.00 4 4 S1 1089553 Thermacetogenium phaeum DSM 12270 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039170 Desulfitibacteraceae 0.00 1 0 G 3234175 Metallumcola 0.00 1 1 S 3039180 Metallumcola ferriviriculae 0.06 109 0 C 909932 Negativicutes 0.04 67 0 O 1843489 Veillonellales 0.04 67 0 F 31977 Veillonellaceae 0.02 35 32 G 39948 Dialister 0.00 1 1 S 39950 Dialister pneumosintes 0.00 1 1 S 487173 Dialister succinatiphilus 0.00 1 1 S 2582419 Dialister hominis 0.02 31 0 G 906 Megasphaera 0.01 26 26 S 907 Megasphaera elsdenii 0.00 4 4 S 2144175 Megasphaera stantonii 0.00 1 1 S 1232428 Megasphaera massiliensis 0.00 1 1 G 29465 Veillonella 0.02 36 0 O 909929 Selenomonadales 0.02 32 0 F 1843491 Selenomonadaceae 0.02 29 0 G 864 Pectinatus 0.02 29 29 S 865 Pectinatus frisingensis 0.00 3 0 G 158846 Megamonas 0.00 2 2 S 437897 Megamonas funiformis 0.00 1 1 S 158847 Megamonas hypermegale 0.00 4 0 F 1843490 Sporomusaceae 0.00 3 0 G 81463 Anaeromusa 0.00 3 0 G1 673272 environmental samples 0.00 3 3 S 673273 uncultured Anaeromusa sp. 0.00 1 0 G 2375 Sporomusa 0.00 1 0 S 2378 Sporomusa ovata 0.00 1 1 S1 1123288 Sporomusa ovata DSM 2662 0.00 6 0 O 1843488 Acidaminococcales 0.00 6 0 F 909930 Acidaminococcaceae 0.00 6 0 G 904 Acidaminococcus 0.00 6 0 S 187327 Acidaminococcus intestini 0.00 6 6 S1 568816 Acidaminococcus intestini RyC-MR95 0.04 83 1 C 1737404 Tissierellia 0.04 81 0 O 1737405 Tissierellales 0.02 42 0 F 1570339 Peptoniphilaceae 0.01 21 0 G 1161127 Murdochiella 0.01 21 21 S 1852373 Murdochiella vaginalis 0.01 11 3 G 165779 Anaerococcus 0.00 4 0 S 33034 Anaerococcus prevotii 0.00 4 4 S1 525919 Anaerococcus prevotii DSM 20548 0.00 3 3 S 1755241 Anaerococcus nagyae 0.00 1 0 G1 2614126 unclassified Anaerococcus 0.00 1 1 S 3036300 Anaerococcus sp. Marseille-Q7828 0.00 4 0 G 150022 Finegoldia 0.00 4 3 S 1260 Finegoldia magna 0.00 1 1 S1 334413 Finegoldia magna ATCC 29328 0.00 4 2 G 162289 Peptoniphilus 0.00 2 2 S 54006 Peptoniphilus ivorii 0.00 2 0 G 2126548 Miniphocaeibacter 0.00 2 2 S 2931922 Miniphocaeibacter halophilus 0.01 19 0 F 2992719 Tepidimicrobiaceae 0.01 19 0 G 2794837 Schnuerera 0.01 19 0 S 45497 Schnuerera ultunensis 0.01 19 19 S1 1288971 [Clostridium] ultunense Esp 0.01 18 0 F 1737406 Tissierellaceae 0.01 17 0 G 2692382 Gudongella 0.01 17 17 S 1582259 Gudongella oleilytica 0.00 1 0 G 41273 Tissierella 0.00 1 0 G1 2638726 unclassified Tissierella 0.00 1 1 S 3070999 Tissierella sp. MB52-C2 0.00 2 0 F 2992717 Acidilutibacteraceae 0.00 2 0 G 2992720 Acidilutibacter 0.00 2 2 S 2507161 Acidilutibacter cellobiosedens 0.00 1 0 C1 1737407 Tissierellia incertae sedis 0.00 1 0 G 190972 Sedimentibacter 0.00 1 0 G1 2649220 unclassified Sedimentibacter 0.00 1 1 S 2816908 Sedimentibacter sp. zth1 0.02 36 0 C 526524 Erysipelotrichia 0.02 36 7 O 526525 Erysipelotrichales 0.01 21 7 F 128827 Erysipelotrichaceae 0.00 5 0 G 174708 Allobaculum 0.00 4 0 G1 2623473 unclassified Allobaculum 0.00 4 4 S 2853432 Allobaculum sp. Allo2 0.00 1 1 S 2834459 Allobaculum mucilyticum 0.00 5 0 G 3059504 Allocoprobacillus 0.00 5 5 S 2944914 Allocoprobacillus halotolerans 0.00 3 0 G 1729679 Faecalibaculum 0.00 3 3 S 1702221 Faecalibaculum rodentium 0.00 1 1 G 1647 Erysipelothrix 0.00 6 0 F 2810280 Coprobacillaceae 0.00 5 0 G 135858 Catenibacterium 0.00 5 0 G1 2643636 unclassified Catenibacterium 0.00 5 5 S 2478954 Catenibacterium sp. co_0103 0.00 1 0 G 2678885 Faecalibacillus 0.00 1 1 S 1982626 Faecalibacillus intestinalis 0.00 2 0 F 2810281 Turicibacteraceae 0.00 2 2 G 191303 Turicibacter 1.26 2396 0 D2 1798711 Cyanobacteriota/Melainabacteria group 1.26 2396 6 P 1117 Cyanobacteriota 1.25 2390 269 C 3028117 Cyanophyceae 0.82 1571 4 C1 1301283 Oscillatoriophycideae 0.74 1415 3 O 1150 Oscillatoriales 0.72 1364 0 F 2934961 Sirenicapillariaceae 0.72 1364 0 G 2596745 Limnospira 0.72 1364 5 S 147322 Limnospira indica 0.69 1313 1313 S1 2760438 Limnospira indica BM01 0.02 46 46 S1 376219 Limnospira indica PCC 8005 0.02 42 0 F 1892252 Microcoleaceae 0.02 34 26 G 54304 Planktothrix 0.00 8 0 S 1160 Planktothrix agardhii 0.00 8 8 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.00 6 0 G 1492710 Oxynema 0.00 6 0 S 2874213 Oxynema aestuarii 0.00 6 6 S1 2064643 Oxynema aestuarii AP17 0.00 2 0 G 132607 Planktothricoides 0.00 2 0 S 132608 Planktothricoides raciborskii 0.00 2 2 S1 2792601 Planktothricoides raciborskii GIHE-MW2 0.00 6 0 F 1892254 Oscillatoriaceae 0.00 5 0 G 1198 Phormidium 0.00 5 0 S 2974039 Phormidium yuhuli 0.00 5 5 S1 2940671 Phormidium yuhuli AB48 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.08 152 0 O 1118 Chroococcales 0.07 125 0 F 1890449 Microcystaceae 0.07 125 2 G 1125 Microcystis 0.06 122 0 G1 2643300 unclassified Microcystis 0.06 122 122 S 1967666 Microcystis sp. MC19 0.00 1 1 S 1126 Microcystis aeruginosa 0.01 20 1 F 1890450 Aphanothecaceae 0.01 18 0 G 1453359 Candidatus Atelocyanobacterium 0.01 18 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 18 18 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 1 0 G 28070 Gloeothece 0.00 1 0 S 2546356 Gloeothece citriformis 0.00 1 1 S1 65393 Gloeothece citriformis PCC 7424 0.00 5 0 F 2815910 Geminocystaceae 0.00 4 3 G 669357 Geminocystis 0.00 1 0 G1 2625037 unclassified Geminocystis 0.00 1 1 S 1617448 Geminocystis sp. NIES-3709 0.00 1 0 G 3079908 Picosynechococcus 0.00 1 1 G1 3079910 unclassified Picosynechococcus 0.00 2 2 F 1890464 Chroococcaceae 0.10 200 0 O 1955042 Gloeomargaritales 0.10 200 0 F 1955043 Gloeomargaritaceae 0.10 200 0 G 1188227 Gloeomargarita 0.10 200 0 S 1188228 Gloeomargarita lithophora 0.10 200 200 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.08 153 15 O 1161 Nostocales 0.05 91 15 F 1892259 Aphanizomenonaceae 0.04 69 0 G 752201 Sphaerospermopsis 0.04 69 0 S 984207 Sphaerospermopsis torques-reginae 0.04 69 69 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 4 4 G 77021 Cylindrospermopsis 0.00 3 0 G 748770 Dolichospermum 0.00 3 0 S 136073 Dolichospermum compactum 0.00 3 3 S1 1973481 Dolichospermum compactum NIES-806 0.02 37 7 F 1162 Nostocaceae 0.01 16 0 G 1163 Anabaena 0.01 13 0 S 1165 Anabaena cylindrica 0.01 13 13 S1 272123 Anabaena cylindrica PCC 7122 0.00 3 0 G1 2619674 unclassified Anabaena 0.00 3 3 S 2490939 Anabaena sp. YBS01 0.00 7 3 G 1177 Nostoc 0.00 4 0 G1 2593658 unclassified Nostoc 0.00 4 4 S 2576904 Nostoc sp. TCL26-01 0.00 7 0 G 264688 Trichormus 0.00 7 0 S 1164 Trichormus azollae 0.00 7 7 S1 551115 'Nostoc azollae' 0708 0.00 5 0 F 1185 Rivulariaceae 0.00 5 0 G 373984 Rivularia 0.00 5 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 5 5 S 373994 Rivularia sp. PCC 7116 0.00 4 0 F 2661849 Calotrichaceae 0.00 4 0 G 1186 Calothrix 0.00 4 0 G1 2619626 unclassified Calothrix 0.00 3 3 S 1170562 Calothrix sp. PCC 6303 0.00 1 1 S 1337936 Calothrix sp. 336/3 0.00 1 0 F 119859 Tolypothrichaceae 0.00 1 0 G 111782 Tolypothrix 0.00 1 0 G1 2649714 unclassified Tolypothrix 0.00 1 1 S 1188 Tolypothrix sp. PCC 7601 0.04 72 3 O 1890424 Synechococcales 0.02 34 0 F 1890426 Synechococcaceae 0.02 34 0 G 1129 Synechococcus 0.02 31 6 G1 2626047 unclassified Synechococcus 0.01 11 11 S 321327 Synechococcus sp. JA-3-3Ab 0.00 9 9 S 195250 Synechococcus sp. PCC 7336 0.00 3 3 S 195253 Synechococcus sp. PCC 6312 0.00 1 1 S 1173263 Synechococcus sp. PCC 7502 0.00 1 1 S 221341 Synechococcus sp. Minos11 0.00 3 0 S 32046 Synechococcus elongatus 0.00 3 3 S1 3115655 Synechococcus elongatus IITB5 0.02 31 0 F 2881426 Prochlorococcaceae 0.02 30 5 G 1218 Prochlorococcus 0.01 25 0 S 1219 Prochlorococcus marinus 0.01 24 24 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.00 1 1 S1 59920 Prochlorococcus marinus str. NATL2A 0.00 1 0 G 167375 Cyanobium 0.00 1 0 G1 2627006 unclassified Cyanobium 0.00 1 1 S 1851505 Cyanobium sp. NIES-981 0.00 4 0 F 1890428 Merismopediaceae 0.00 4 0 G 1142 Synechocystis 0.00 4 0 G1 2640012 unclassified Synechocystis 0.00 4 4 S 3144951 Synechocystis sp. LKSZ1 0.03 56 47 O 307595 Gloeobacterales 0.00 9 0 F 1890422 Gloeobacteraceae 0.00 9 8 G 33071 Gloeobacter 0.00 1 0 S 1416614 Gloeobacter kilaueensis 0.00 1 1 S1 1183438 Gloeobacter kilaueensis JS1 0.01 25 0 O 3079749 Leptolyngbyales 0.01 24 1 F 1890438 Leptolyngbyaceae 0.01 22 0 F1 3081713 Leptolyngbya group 0.01 22 0 G 47251 Leptolyngbya 0.01 18 0 G1 2650499 unclassified Leptolyngbya 0.01 14 14 S 2812896 Leptolyngbya sp. 7M 0.00 4 4 S 1115757 Leptolyngbya sp. BL0902 0.00 4 4 S 1184 Leptolyngbya boryana 0.00 1 0 G 1874526 Kovacikia 0.00 1 0 S 2931930 Kovacikia minuta 0.00 1 1 S1 2653194 Kovacikia minuta CCNUW1 0.00 1 0 F 2303527 Trichocoleusaceae 0.00 1 0 G 3045815 Trichothermofontia 0.00 1 0 S 3045816 Trichothermofontia sichuanensis 0.00 1 1 S1 2016064 Trichothermofontia sichuanensis B231 0.01 11 0 O 3079748 Oculatellales 0.01 11 0 F 2303507 Oculatellaceae 0.01 11 0 G 3065395 Thermocoleostomius 0.01 11 0 S 3065396 Thermocoleostomius sinensis 0.01 11 11 S1 2016057 Thermocoleostomius sinensis A174 0.00 9 0 O 2881377 Pseudanabaenales 0.00 9 0 F 1890436 Pseudanabaenaceae 0.00 9 1 G 1152 Pseudanabaena 0.00 8 0 G1 2593292 unclassified Pseudanabaena 0.00 8 8 S 82654 Pseudanabaena sp. PCC 7367 0.00 8 0 O 3079757 Gomontiellales 0.00 8 0 F 1890431 Chamaesiphonaceae 0.00 8 0 G 217161 Chamaesiphon 0.00 8 0 S 1173032 Chamaesiphon minutus 0.00 8 8 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 6 0 O 3039985 Nodosilineales 0.00 6 0 F 3039986 Nodosilineaceae 0.00 6 0 G 170610 Halomicronema 0.00 6 0 S 1209493 Halomicronema hongdechloris 0.00 6 6 S1 1641165 Halomicronema hongdechloris C2206 0.00 6 0 O 3079744 Acaryochloridales 0.00 6 0 F 1890429 Acaryochloridaceae 0.00 6 0 G 155977 Acaryochloris 0.00 6 0 G1 2631661 unclassified Acaryochloris 0.00 6 6 S 2740837 Acaryochloris sp. 'Moss Beach' 0.00 3 0 O 52604 Pleurocapsales 0.00 2 0 F 1890500 Hyellaceae 0.00 2 0 G 44474 Pleurocapsa 0.00 2 0 G1 2645907 unclassified Pleurocapsa 0.00 2 2 S 3040204 Pleurocapsa sp. FMAR1 0.00 1 0 F 1890498 Dermocarpellaceae 0.00 1 0 G 102115 Stanieria 0.00 1 0 S 102116 Stanieria cyanosphaera 0.00 1 1 S1 111780 Stanieria cyanosphaera PCC 7437 0.00 1 0 O 1890505 Chroococcidiopsidales 0.00 1 0 F 1890528 Chroococcidiopsidaceae 0.00 1 1 G 54298 Chroococcidiopsis 0.77 1465 21 P 201174 Actinomycetota 0.72 1368 124 C 1760 Actinomycetes 0.17 327 14 O 85006 Micrococcales 0.11 218 0 F 2805591 Tropherymataceae 0.11 218 0 G 2038 Tropheryma 0.11 218 218 S 2039 Tropheryma whipplei 0.03 57 3 F 1268 Micrococcaceae 0.01 24 0 G 1742989 Glutamicibacter 0.01 16 0 G1 2627139 unclassified Glutamicibacter 0.01 15 15 S 1155384 Glutamicibacter sp. ZJUTW 0.00 1 1 S 3046593 Glutamicibacter sp. B1 0.00 5 5 S 37929 Glutamicibacter nicotianae 0.00 3 3 S 162496 Glutamicibacter creatinolyticus 0.01 16 0 G 1663 Arthrobacter 0.01 13 0 G1 235627 unclassified Arthrobacter 0.00 8 8 S 2828862 Arthrobacter sp. Helios 0.00 3 3 S 2600159 Arthrobacter sp. UKPF54-2 0.00 1 1 S 2991715 Arthrobacter sp. ATA002 0.00 1 1 S 2830983 Arthrobacter sp. NtRootA1 0.00 2 2 S 37921 Arthrobacter agilis 0.00 1 1 S 2964616 Arthrobacter zhaoxinii 0.00 7 1 G 32207 Rothia 0.00 4 4 S 2047 Rothia dentocariosa 0.00 1 1 S 43675 Rothia mucilaginosa 0.00 1 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 3047030 Rothia sp. SD9660Na 0.00 3 1 G 57493 Kocuria 0.00 2 2 S 71999 Kocuria palustris 0.00 3 0 G 1742993 Pseudarthrobacter 0.00 3 0 G1 2647000 unclassified Pseudarthrobacter 0.00 3 3 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 1 G 1742992 Paenarthrobacter 0.01 28 4 F 85023 Microbacteriaceae 0.01 14 1 G 33882 Microbacterium 0.00 4 3 G1 2609290 unclassified Microbacterium 0.00 1 1 S 2992441 Microbacterium sp. J1-1 0.00 3 3 S 936337 Microbacterium amylolyticum 0.00 3 3 S 162426 Microbacterium hominis 0.00 2 2 S 82380 Microbacterium oxydans 0.00 1 1 S 3028316 Microbacterium horticulturae 0.00 4 4 G 33886 Rathayibacter 0.00 2 1 G 33877 Agromyces 0.00 1 0 G1 2639701 unclassified Agromyces 0.00 1 1 S 2932244 Agromyces sp. H17E-10 0.00 1 0 G 2034 Curtobacterium 0.00 1 1 G1 257496 unclassified Curtobacterium 0.00 1 1 G 1573 Clavibacter 0.00 1 0 F1 1655488 Luna cluster 0.00 1 1 F2 1655489 Luna-1 subcluster 0.00 1 0 G 255204 Pseudoclavibacter 0.00 1 0 G1 2615177 unclassified Pseudoclavibacter 0.00 1 1 S 2866588 Pseudoclavibacter sp. Marseille-Q3772 0.00 7 0 F 85016 Cellulomonadaceae 0.00 7 0 G 1707 Cellulomonas 0.00 7 0 G1 2620175 unclassified Cellulomonas 0.00 7 7 S 2591145 Cellulomonas sp. Y8 0.00 1 0 F 85019 Brevibacteriaceae 0.00 1 1 G 1696 Brevibacterium 0.00 1 0 F 85020 Dermabacteraceae 0.00 1 0 G 36739 Dermabacter 0.00 1 1 S 1667168 Dermabacter jinjuensis 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1862 Dermatophilus 0.00 1 1 S 1863 Dermatophilus congolensis 0.15 295 2 O 85007 Mycobacteriales 0.08 155 0 F 1653 Corynebacteriaceae 0.08 155 22 G 1716 Corynebacterium 0.03 58 58 S 43765 Corynebacterium amycolatum 0.02 32 32 S 679663 Corynebacterium canis 0.01 19 19 S 1737425 Corynebacterium provencense 0.00 3 3 S 108486 Corynebacterium falsenii 0.00 3 3 S 156976 Corynebacterium riegelii 0.00 3 3 S 53374 Corynebacterium coyleae 0.00 2 0 S 575200 Corynebacterium maris 0.00 2 2 S1 1224163 Corynebacterium maris DSM 45190 0.00 2 2 S 1719 Corynebacterium pseudotuberculosis 0.00 2 2 S 38289 Corynebacterium jeikeium 0.00 2 2 S 43768 Corynebacterium matruchotii 0.00 1 1 S 2768834 Corynebacterium zhongnanshanii 0.00 1 1 S 65058 Corynebacterium ulcerans 0.00 1 0 S 1032851 Corynebacterium nuruki 0.00 1 1 S1 863239 Corynebacterium nuruki S6-4 0.00 1 1 S 61592 Corynebacterium durum 0.00 1 1 S 2055947 Corynebacterium heidelbergense 0.00 1 1 S 571915 Corynebacterium mustelae 0.00 1 1 S 2080740 Corynebacterium yudongzhengii 0.05 92 0 F 85025 Nocardiaceae 0.04 72 32 G 1817 Nocardia 0.02 37 37 S 37332 Nocardia seriolae 0.00 1 1 S 53431 Nocardia salmonicida 0.00 1 1 S 135487 Nocardia cyriacigeorgica 0.00 1 1 S 2055889 Nocardia tengchongensis 0.01 20 16 G 1827 Rhodococcus 0.00 1 1 S 1828 Rhodococcus fascians 0.00 1 0 G1 2840174 Rhodococcus erythropolis group 0.00 1 1 S 1833 Rhodococcus erythropolis 0.00 1 0 S 132919 Rhodococcus jostii 0.00 1 1 S1 101510 Rhodococcus jostii RHA1 0.00 1 1 S 191292 Rhodococcus aetherivorans 0.02 42 2 F 1762 Mycobacteriaceae 0.02 38 19 G 1866885 Mycolicibacterium 0.01 17 0 G1 2636767 unclassified Mycolicibacterium 0.01 17 17 S 3042320 Mycolicibacterium sp. ND9-15 0.00 1 1 S 134601 Mycolicibacterium goodii 0.00 1 1 S 39687 Mycolicibacterium austroafricanum 0.00 2 0 G 1763 Mycobacterium 0.00 2 0 G1 77643 Mycobacterium tuberculosis complex 0.00 2 2 S 1773 Mycobacterium tuberculosis 0.00 2 0 F 85029 Dietziaceae 0.00 2 2 G 37914 Dietzia 0.00 2 0 F 2805586 Lawsonellaceae 0.00 2 0 G 1847725 Lawsonella 0.00 2 2 S 1528099 Lawsonella clevelandensis 0.10 188 0 O 85011 Kitasatosporales 0.10 188 4 F 2062 Streptomycetaceae 0.10 183 17 G 1883 Streptomyces 0.07 131 5 G1 2593676 unclassified Streptomyces 0.04 67 67 S 2903645 Streptomyces sp. NBC_00310 0.01 21 21 S 3062782 Streptomyces sp. HUAS CX7 0.01 12 12 S 2791991 Streptomyces sp. MUM 178J 0.01 10 10 S 2750025 Streptomyces sp. CB00271 0.00 8 8 S 3075198 Streptomyces sp. ITFR-16 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 477697 Streptomyces sp. T12 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 3075825 Streptomyces sp. AM8-1-1 0.00 1 1 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 862751 Streptomyces sp. SirexAA-E 0.00 1 1 S 2931974 Streptomyces sp. 2P-4 0.00 1 1 S 2903640 Streptomyces sp. NBC_00239 0.01 12 0 G1 1477431 Streptomyces albidoflavus group 0.01 12 12 S 1886 Streptomyces albidoflavus 0.00 4 3 S 54571 Streptomyces venezuelae 0.00 1 1 S1 953739 Streptomyces venezuelae ATCC 10712 0.00 3 3 S 193462 Streptomyces niveus 0.00 2 2 S 1961 Streptomyces virginiae 0.00 2 0 G1 2839105 Streptomyces violaceusniger group 0.00 1 1 S 155177 Streptomyces yatensis 0.00 1 1 S 1226757 Streptomyces rapamycinicus 0.00 2 2 S 1616117 Streptomyces formicae 0.00 2 2 S 1535768 Streptomyces lunaelactis 0.00 2 2 S 83656 Streptomyces tsukubensis 0.00 1 1 S 285557 Streptomyces caniferus 0.00 1 1 S 1169025 Streptomyces pratensis 0.00 1 1 S 67304 Streptomyces griseorubiginosus 0.00 1 1 S 1906 Streptomyces fradiae 0.00 1 1 S 68200 Streptomyces flavofungini 0.00 1 0 G1 629295 Streptomyces griseus group 0.00 1 0 G2 1482561 Streptomyces anulatus subgroup 0.00 1 1 S 1892 Streptomyces anulatus 0.00 1 0 G 2063 Kitasatospora 0.00 1 1 S 67352 Kitasatospora purpeofusca 0.09 163 0 O 85004 Bifidobacteriales 0.09 163 0 F 31953 Bifidobacteriaceae 0.09 163 3 G 1678 Bifidobacterium 0.08 160 83 S 216816 Bifidobacterium longum 0.04 73 73 S1 1682 Bifidobacterium longum subsp. infantis 0.00 4 4 S1 1931217 Bifidobacterium longum subsp. suillum 0.07 130 2 O 85009 Propionibacteriales 0.06 107 52 F 31957 Propionibacteriaceae 0.03 48 3 G 1912216 Cutibacterium 0.02 42 42 S 1747 Cutibacterium acnes 0.00 2 2 S 33010 Cutibacterium avidum 0.00 1 1 S 33011 Cutibacterium granulosum 0.00 2 0 G 1743 Propionibacterium 0.00 2 2 S 1744 Propionibacterium freudenreichii 0.00 2 0 G 29404 Microlunatus 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.00 1 1 S 630515 Microlunatus soli 0.00 1 0 G 369926 Brooklawnia 0.00 1 1 S 3041175 Brooklawnia propionicigenes 0.00 1 1 G 1911549 Raineyella 0.00 1 0 G 2801844 Arachnia 0.00 1 1 S 1750 Arachnia propionica 0.01 15 0 F 85015 Nocardioidaceae 0.01 12 0 G 1839 Nocardioides 0.01 11 11 S 3095075 Nocardioides renjunii 0.00 1 1 S 2714938 Nocardioides piscis 0.00 3 2 G 2040 Aeromicrobium 0.00 1 0 G1 2633570 unclassified Aeromicrobium 0.00 1 1 S 2107713 Aeromicrobium sp. A1-2 0.00 6 0 F 2726069 Kribbellaceae 0.00 6 4 G 182639 Kribbella 0.00 2 1 G1 2644121 unclassified Kribbella 0.00 1 1 S 2903578 Kribbella sp. NBC_01245 0.03 63 0 O 85012 Streptosporangiales 0.03 58 0 F 2012 Thermomonosporaceae 0.03 57 0 G 2019 Thermomonospora 0.03 57 57 S 1411117 Thermomonospora amylolytica 0.00 1 0 G 1988 Actinomadura 0.00 1 0 G1 2626254 unclassified Actinomadura 0.00 1 1 S 1219491 Actinomadura sp. WMMB 499 0.00 4 1 F 2004 Streptosporangiaceae 0.00 2 0 G 83681 Nonomuraea 0.00 1 1 S 93944 Nonomuraea gerenzanensis 0.00 1 1 S 2047744 Nonomuraea glycinis 0.00 1 0 G 147067 Thermobispora 0.00 1 1 S 2006 Thermobispora bispora 0.00 1 0 F 83676 Nocardiopsaceae 0.00 1 0 G 83677 Thermobifida 0.00 1 1 S 483545 Thermobifida halotolerans 0.01 25 0 O 2037 Actinomycetales 0.01 25 19 F 2049 Actinomycetaceae 0.00 3 1 G 1654 Actinomyces 0.00 1 1 S 111015 Actinomyces radicidentis 0.00 1 0 G1 2609248 unclassified Actinomyces 0.00 1 1 S 2708340 Actinomyces sp. zg-332 0.00 2 2 G 2529408 Schaalia 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.01 24 0 O 2039638 Candidatus Nanopelagicales 0.01 24 19 F 2162846 Candidatus Nanopelagicaceae 0.00 5 3 G 2039639 Candidatus Nanopelagicus 0.00 2 2 S 1884915 Candidatus Nanopelagicus hibericus 0.00 9 0 O 85013 Frankiales 0.00 9 5 F 74712 Frankiaceae 0.00 4 0 G 1854 Frankia 0.00 4 4 S 106370 Frankia casuarinae 0.00 7 0 O 85008 Micromonosporales 0.00 7 1 F 28056 Micromonosporaceae 0.00 4 1 G 1873 Micromonospora 0.00 3 0 G1 2617518 unclassified Micromonospora 0.00 3 3 S 2975988 Micromonospora sp. NBC_01813 0.00 1 0 G 35753 Dactylosporangium 0.00 1 0 G1 2621675 unclassified Dactylosporangium 0.00 1 1 S 2975959 Dactylosporangium sp. NBC_01737 0.00 1 0 G 168694 Salinispora 0.00 1 0 S 168695 Salinispora tropica 0.00 1 1 S1 369723 Salinispora tropica CNB-440 0.00 4 0 O 85010 Pseudonocardiales 0.00 4 0 F 2070 Pseudonocardiaceae 0.00 2 0 G 1835 Saccharopolyspora 0.00 2 2 S 455344 Saccharopolyspora gloriosae 0.00 2 0 G 1813 Amycolatopsis 0.00 1 1 S 31958 Amycolatopsis orientalis 0.00 1 1 S 715473 Amycolatopsis acidiphila 0.00 4 0 O 622450 Actinopolysporales 0.00 4 0 F 622451 Actinopolysporaceae 0.00 4 0 G 1849 Actinopolyspora 0.00 4 4 S 414996 Actinopolyspora erythraea 0.00 3 0 O 85014 Glycomycetales 0.00 3 0 F 85034 Glycomycetaceae 0.00 2 0 G 2838311 Natronoglycomyces 0.00 2 2 S 2811108 Natronoglycomyces albus 0.00 1 0 G 283810 Stackebrandtia 0.00 1 0 S 283811 Stackebrandtia nassauensis 0.00 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.00 1 0 O 1643683 Acidothermales 0.00 1 0 F 85032 Acidothermaceae 0.00 1 0 G 28048 Acidothermus 0.00 1 0 S 28049 Acidothermus cellulolyticus 0.00 1 1 S1 351607 Acidothermus cellulolyticus 11B 0.00 1 0 O 2495578 Sporichthyales 0.00 1 0 F 85033 Sporichthyaceae 0.00 1 0 G 2078948 Epidermidibacterium 0.00 1 1 S 1891644 Epidermidibacterium keratini 0.03 50 0 C 84998 Coriobacteriia 0.02 39 0 O 1643822 Eggerthellales 0.02 39 4 F 1643826 Eggerthellaceae 0.01 26 0 G 1926677 Raoultibacter 0.01 26 26 S 1907662 Raoultibacter timonensis 0.00 8 8 G 447020 Adlercreutzia 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.01 11 0 O 84999 Coriobacteriales 0.00 7 0 F 1643824 Atopobiaceae 0.00 7 7 G 2767353 Lancefieldella 0.00 4 0 F 84107 Coriobacteriaceae 0.00 4 0 G 102106 Collinsella 0.00 4 4 S 74426 Collinsella aerofaciens 0.01 14 0 C 84995 Rubrobacteria 0.01 14 0 O 84996 Rubrobacterales 0.01 14 0 F 84997 Rubrobacteraceae 0.01 14 10 G 42255 Rubrobacter 0.00 2 2 S 2653851 Rubrobacter tropicus 0.00 1 1 S 42256 Rubrobacter radiotolerans 0.00 1 1 S 2653852 Rubrobacter marinus 0.00 9 0 C 84992 Acidimicrobiia 0.00 9 0 O 84993 Acidimicrobiales 0.00 8 8 F 633392 Iamiaceae 0.00 1 0 F 2448023 Ilumatobacteraceae 0.00 1 0 G 682522 Ilumatobacter 0.00 1 0 S 467094 Ilumatobacter coccineus 0.00 1 1 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 2 0 C 1497346 Thermoleophilia 0.00 2 0 O 588673 Solirubrobacterales 0.00 2 0 F 320583 Conexibacteraceae 0.00 2 0 G 191494 Conexibacter 0.00 2 0 G1 2627773 unclassified Conexibacter 0.00 2 2 S 2937800 Conexibacter sp. S30A1 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1755823 Egicoccales 0.00 1 0 F 1755824 Egicoccaceae 0.00 1 0 G 1755825 Egicoccus 0.00 1 1 S 1670830 Egicoccus halophilus 0.24 464 199 P 544448 Mycoplasmatota 0.09 178 23 C 31969 Mollicutes 0.06 106 0 O 2085 Mycoplasmatales 0.05 96 0 F 2092 Mycoplasmataceae 0.05 96 23 G 2093 Mycoplasma 0.03 48 1 G1 2683645 unclassified Mycoplasma 0.01 20 20 S 2967302 Mycoplasma sp. 1018B 0.01 14 14 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.01 13 13 S 2801918 Mycoplasma sp. E35C 0.01 25 0 G1 656088 Mycoplasma mycoides group 0.01 23 23 S 1179777 Mycoplasma feriruminatoris 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.01 10 0 O1 1665628 unclassified Mycoplasmatales 0.01 10 10 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.02 39 0 O 186328 Entomoplasmatales 0.02 39 0 F 2131 Spiroplasmataceae 0.02 39 32 G 2132 Spiroplasma 0.00 4 4 S 2141 Spiroplasma ixodetis 0.00 3 1 G1 2637901 unclassified Spiroplasma 0.00 2 2 S 3066313 Spiroplasma endosymbiont of Zeiraphera isertana 0.01 10 0 O 186329 Acholeplasmatales 0.01 10 0 F 2146 Acholeplasmataceae 0.00 7 4 G 33926 Candidatus Phytoplasma 0.00 3 0 G1 85628 16SrVIII (Loofah witches'-broom group) 0.00 3 3 S 35773 Candidatus Phytoplasma luffae 0.00 2 0 G 2147 Acholeplasma 0.00 2 2 S 2148 Acholeplasma laidlawii 0.00 1 0 G 2903107 Paracholeplasma 0.00 1 1 S 61635 Paracholeplasma brassicae 0.04 67 0 O 2790996 Mycoplasmoidales 0.02 46 0 F 2895623 Metamycoplasmataceae 0.02 43 11 G 2767358 Mycoplasmopsis 0.01 17 17 S 55603 Mycoplasmopsis caviae 0.00 5 5 S 33923 Mycoplasmopsis felis 0.00 5 5 S 28903 Mycoplasmopsis bovis 0.00 3 3 S 2109 Mycoplasmopsis synoviae 0.00 1 1 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 114883 Mycoplasmopsis equigenitalium 0.00 3 0 G 2895509 Metamycoplasma 0.00 3 3 S 45363 Metamycoplasma alkalescens 0.01 21 0 F 2790998 Mycoplasmoidaceae 0.01 16 0 G 2791001 Malacoplasma 0.00 8 8 S 2116 Malacoplasma iowae 0.00 8 0 S 28227 Malacoplasma penetrans 0.00 8 8 S1 272633 Malacoplasma penetrans HF-2 0.00 5 5 G 2129 Ureaplasma 0.01 20 0 C 1912503 Candidatus Izimaplasma 0.01 20 0 O 2975519 Candidatus Izemoplasmatales 0.01 20 0 F 2975520 Candidatus Izemoplasmataceae 0.01 20 0 G 2975521 Candidatus Xianfuyuplasma 0.01 20 20 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.16 296 0 P 200795 Chloroflexota 0.11 213 0 C 388447 Ktedonobacteria 0.11 213 0 O 388448 Ktedonobacterales 0.11 213 0 F 2692416 Ktedonosporobacteraceae 0.11 213 0 G 2692417 Ktedonosporobacter 0.11 213 213 S 2509675 Ktedonosporobacter rubrisoli 0.02 36 0 C 32061 Chloroflexia 0.01 28 0 O 3139175 Candidatus Chloroheliales 0.01 28 0 F 3139177 Candidatus Chloroheliaceae 0.01 28 0 G 3139173 Candidatus Chlorohelix 0.01 28 28 S 3003348 Candidatus Chlorohelix allophototropha 0.00 8 1 O 32064 Chloroflexales 0.00 7 0 O1 1508595 Roseiflexineae 0.00 7 0 F 1508635 Roseiflexaceae 0.00 7 1 G 120961 Roseiflexus 0.00 6 0 G1 2609473 unclassified Roseiflexus 0.00 6 6 S 357808 Roseiflexus sp. RS-1 0.01 28 0 C 292625 Anaerolineae 0.01 28 0 O 292629 Anaerolineales 0.01 28 3 F 292628 Anaerolineaceae 0.01 19 0 G 1649478 Pelolinea 0.01 19 19 S 913107 Pelolinea submarina 0.00 6 0 G 233189 Anaerolinea 0.00 6 0 S 167964 Anaerolinea thermophila 0.00 6 6 S1 926569 Anaerolinea thermophila UNI-1 0.00 8 0 C 301297 Dehalococcoidia 0.00 7 0 O 1202465 Dehalococcoidales 0.00 7 0 F 1202464 Dehalococcoidaceae 0.00 7 5 G 670486 Dehalogenimonas 0.00 2 2 G1 2638108 unclassified Dehalogenimonas 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 6 0 C 2682225 Tepidiformia 0.00 6 0 O 2682226 Tepidiformales 0.00 6 0 F 2682227 Tepidiformaceae 0.00 6 6 G 2682228 Tepidiforma 0.00 3 0 C 2364196 Candidatus Thermofonsia 0.00 3 0 O 2364208 Phototrophicales 0.00 3 0 F 2922432 Phototrophicaceae 0.00 3 0 G 2922426 Phototrophicus 0.00 3 3 S 2710758 Phototrophicus methaneseepsis 0.00 1 0 C 1382928 Ardenticatenia 0.00 1 0 O 3085098 Candidatus Promineifilales 0.00 1 0 F 3085097 Candidatus Promineifilaceae 0.00 1 0 G 1988031 Candidatus Promineifilum 0.00 1 1 S 1806508 Candidatus Promineifilum breve 0.00 1 0 C 1495646 Thermoflexia 0.00 1 0 O 1495647 Thermoflexales 0.00 1 0 F 1495648 Thermoflexaceae 0.00 1 0 G 1495649 Thermoflexus 0.00 1 1 S 1495650 Thermoflexus hugenholtzii 0.10 190 1 P 67819 Armatimonadota 0.09 170 0 C 1077257 Chthonomonadia 0.09 170 0 O 1077263 Chthonomonadales 0.09 170 0 F 1077264 Chthonomonadaceae 0.09 170 0 G 1077265 Chthonomonas 0.09 170 0 S 454171 Chthonomonas calidirosea 0.09 170 170 S1 1303518 Chthonomonas calidirosea T49 0.01 19 0 C 1663419 Fimbriimonadia 0.01 19 0 O 1663425 Fimbriimonadales 0.01 19 0 F 1663426 Fimbriimonadaceae 0.01 19 0 G 1005038 Fimbriimonas 0.01 19 0 S 1005039 Fimbriimonas ginsengisoli 0.01 19 19 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.01 12 0 P 1297 Deinococcota 0.01 12 3 C 188787 Deinococci 0.00 8 0 O 118964 Deinococcales 0.00 8 0 F 183710 Deinococcaceae 0.00 8 3 G 1298 Deinococcus 0.00 3 0 S 432329 Deinococcus peraridilitoris 0.00 3 3 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 1 1 S 200252 Deinococcus aetherius 0.00 1 1 S 1211322 Deinococcus metallilatus 0.00 1 0 O 68933 Thermales 0.00 1 1 F 188786 Thermaceae 0.00 4 0 P 3027942 Thermomicrobiota 0.00 4 0 C 189775 Thermomicrobia 0.00 4 0 O 85001 Sphaerobacterales 0.00 4 0 O1 255728 Sphaerobacterineae 0.00 4 0 F 85002 Sphaerobacteraceae 0.00 4 0 G 2056 Sphaerobacter 0.00 4 0 S 2057 Sphaerobacter thermophilus 0.00 4 4 S1 479434 Sphaerobacter thermophilus DSM 20745 0.00 3 0 P 1154676 Vulcanimicrobiota 0.00 3 0 C 2829293 Vulcanimicrobiia 0.00 3 0 O 2599632 Vulcanimicrobiales 0.00 3 0 F 2829291 Vulcanimicrobiaceae 0.00 3 0 G 3016049 Vulcanimicrobium 0.00 3 3 S 3016050 Vulcanimicrobium alpinum 0.83 1573 58 P 200940 Thermodesulfobacteriota 0.73 1394 1 C 3031651 Desulfuromonadia 0.70 1330 8 O 69541 Desulfuromonadales 0.69 1314 0 F 213421 Desulfuromonadaceae 0.69 1314 1276 G 890 Desulfuromonas 0.02 38 38 S 1603606 Desulfuromonas soudanensis 0.00 5 0 F 3031659 Geopsychrobacteraceae 0.00 5 0 G 37817 Desulfuromusa 0.00 5 0 G1 97902 environmental samples 0.00 5 5 S 219183 uncultured Desulfuromusa sp. 0.00 2 0 F 2812024 Syntrophotaleaceae 0.00 2 0 G 2812025 Syntrophotalea 0.00 1 1 S 29542 Syntrophotalea acetylenica 0.00 1 1 S 1842532 Syntrophotalea acetylenivorans 0.00 1 0 F 3031665 Geoalkalibacteraceae 0.00 1 0 G 392332 Geoalkalibacter 0.00 1 1 S 483547 Geoalkalibacter subterraneus 0.03 63 0 O 3031668 Geobacterales 0.03 63 0 F 213422 Geobacteraceae 0.03 63 61 G 28231 Geobacter 0.00 2 0 G1 2627627 unclassified Geobacter 0.00 1 1 S 2495594 Geobacter sp. SVR 0.00 1 1 S 3080755 Geobacter sp. 60473 0.05 86 0 C 67799 Thermodesulfobacteria 0.05 86 85 O 188710 Thermodesulfobacteriales 0.00 1 1 F 188711 Thermodesulfobacteriaceae 0.01 19 0 C 3031449 Desulfovibrionia 0.01 19 0 O 213115 Desulfovibrionales 0.01 19 0 F 194924 Desulfovibrionaceae 0.01 13 0 G 2910978 Megalodesulfovibrio 0.01 13 0 S 879 Megalodesulfovibrio gigas 0.01 13 13 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 3 0 G 41707 Lawsonia 0.00 3 3 S 29546 Lawsonia intracellularis 0.00 2 1 G 2035811 Pseudodesulfovibrio 0.00 1 1 S 2678688 Pseudodesulfovibrio cashew 0.00 1 0 G 2802295 Nitratidesulfovibrio 0.00 1 0 S 881 Nitratidesulfovibrio vulgaris 0.00 1 1 S1 573059 Nitratidesulfovibrio vulgaris RCH1 0.00 8 0 C 3031451 Desulfobulbia 0.00 8 0 O 3024411 Desulfobulbales 0.00 6 0 F 213121 Desulfobulbaceae 0.00 6 0 G 893 Desulfobulbus 0.00 6 6 S 1986146 Desulfobulbus oralis 0.00 2 0 F 2886822 Desulfocapsaceae 0.00 2 0 G 109168 Desulfotalea 0.00 2 0 S 84980 Desulfotalea psychrophila 0.00 2 2 S1 177439 Desulfotalea psychrophila LSv54 0.00 7 0 C 3024418 Desulfobacteria 0.00 7 0 O 213118 Desulfobacterales 0.00 4 0 F 213119 Desulfobacteraceae 0.00 3 3 G 2289 Desulfobacter 0.00 1 0 G 28222 Desulfobacula 0.00 1 0 S 28223 Desulfobacula toluolica 0.00 1 1 S1 651182 Desulfobacula toluolica Tol2 0.00 2 0 F 3031624 Desulfosarcinaceae 0.00 2 0 G 2299 Desulfosarcina 0.00 2 0 G1 2684906 unclassified Desulfosarcina 0.00 2 2 S 933262 Desulfosarcina sp. BuS5 0.00 1 0 F 2931039 Desulfococcaceae 0.00 1 0 G 45654 Desulfonema 0.00 1 1 S 45656 Desulfonema limicola 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 1 F 213465 Syntrophobacteraceae 0.25 484 0 D1 1783270 FCB group 0.25 483 0 D2 68336 Bacteroidota/Chlorobiota group 0.25 473 6 P 976 Bacteroidota 0.15 284 0 C 200643 Bacteroidia 0.15 283 0 O 171549 Bacteroidales 0.09 177 2 F 171552 Prevotellaceae 0.08 156 20 G 2974251 Segatella 0.07 124 98 S 165179 Segatella copri 0.01 26 26 S1 537011 Segatella copri DSM 18205 0.01 11 11 S 77095 Segatella bryantii 0.00 1 1 S 2518605 Segatella hominis 0.01 18 1 G 838 Prevotella 0.00 7 7 S 28132 Prevotella melaninogenica 0.00 7 7 S 2801997 Prevotella herbatica 0.00 3 3 S 28128 Prevotella corporis 0.00 1 0 G 577309 Paraprevotella 0.00 1 1 S 454154 Paraprevotella clara 0.04 67 1 F 815 Bacteroidaceae 0.03 61 2 G 816 Bacteroides 0.02 40 0 G1 2646097 unclassified Bacteroides 0.02 40 40 S 2847299 Bacteroides sp. DH3716P 0.01 14 14 S 817 Bacteroides fragilis 0.00 2 2 S 818 Bacteroides thetaiotaomicron 0.00 2 2 S 46506 Bacteroides stercoris 0.00 1 0 S 290053 Bacteroides helcogenes 0.00 1 1 S1 693979 Bacteroides helcogenes P 36-108 0.00 5 0 G 909656 Phocaeicola 0.00 3 0 S 376805 Phocaeicola salanitronis 0.00 3 3 S1 667015 Phocaeicola salanitronis DSM 18170 0.00 2 2 S 357276 Phocaeicola dorei 0.01 12 0 F 2005525 Tannerellaceae 0.01 11 1 G 375288 Parabacteroides 0.01 10 10 S 46503 Parabacteroides merdae 0.00 1 0 G 195950 Tannerella 0.00 1 1 S 712710 Tannerella serpentiformis 0.01 10 0 F 2005473 Muribaculaceae 0.00 8 0 G 2815786 Sodaliphilus 0.00 8 8 S 2606626 Sodaliphilus pleomorphus 0.00 2 0 G 2518495 Duncaniella 0.00 2 2 G1 2649562 unclassified Duncaniella 0.00 7 0 F 2760872 Tenuifilaceae 0.00 7 0 G 2760873 Tenuifilum 0.00 7 7 S 2590900 Tenuifilum thalassicum 0.00 5 0 F 1853231 Odoribacteraceae 0.00 4 0 G 283168 Odoribacter 0.00 4 4 S 28118 Odoribacter splanchnicus 0.00 1 1 G 574697 Butyricimonas 0.00 4 0 F 2005520 Dysgonomonadaceae 0.00 4 0 G 156973 Dysgonomonas 0.00 4 4 G1 2630389 unclassified Dysgonomonas 0.00 1 0 F 171551 Porphyromonadaceae 0.00 1 0 G 836 Porphyromonas 0.00 1 0 G1 2645799 unclassified Porphyromonas 0.00 1 1 S 712435 Porphyromonas sp. oral taxon 275 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 0 F 1573805 Marinifilaceae 0.00 1 0 G 866673 Marinifilum 0.00 1 0 G1 866674 environmental samples 0.00 1 1 S 1127472 uncultured Marinifilum sp. 0.06 123 0 C 117743 Flavobacteriia 0.06 123 5 O 200644 Flavobacteriales 0.04 85 0 O1 313602 Flavobacteriales incertae sedis 0.04 85 0 G 336809 Candidatus Karelsulcia 0.04 85 85 S 336810 Candidatus Karelsulcia muelleri 0.01 27 0 F 49546 Flavobacteriaceae 0.01 12 0 G 237 Flavobacterium 0.00 8 8 S 2704140 Flavobacterium bizetiae 0.00 4 4 S 2906077 Flavobacterium davisii 0.00 8 0 G 1016 Capnocytophaga 0.00 4 4 S 1017 Capnocytophaga gingivalis 0.00 4 4 S 28188 Capnocytophaga canimorsus 0.00 3 0 G 286104 Winogradskyella 0.00 3 3 S 2686077 Winogradskyella forsetii 0.00 2 0 G 83612 Psychroflexus 0.00 2 0 G1 196864 unclassified Psychroflexus 0.00 2 2 S 2777186 Psychroflexus sp. ALD_RP9 0.00 1 0 G 2967089 Abyssalbus 0.00 1 1 S 2926907 Abyssalbus ytuae 0.00 1 0 G 292691 Christiangramia 0.00 1 1 S 279359 Christiangramia echinicola 0.00 4 0 F 2762318 Weeksellaceae 0.00 4 0 F1 2782232 Chryseobacterium group 0.00 2 1 G 59732 Chryseobacterium 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.00 2 2 G 2782231 Kaistella 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 1 G 34098 Blattabacterium 0.00 1 0 F 1755828 Ichthyobacteriaceae 0.00 1 0 G 1755829 Ichthyobacterium 0.00 1 1 S 242600 Ichthyobacterium seriolicida 0.03 57 0 C 768503 Cytophagia 0.03 57 1 O 768507 Cytophagales 0.01 28 0 F 89373 Cytophagaceae 0.01 28 0 G 107 Spirosoma 0.01 23 23 S 2666025 Spirosoma endbachense 0.00 5 5 S 2735870 Spirosoma taeanense 0.01 19 0 F 1853234 Persicobacteraceae 0.01 19 0 G 1434007 Fulvitalea 0.01 19 19 S 1182444 Fulvitalea axinellae 0.00 3 0 F 200667 Flammeovirgaceae 0.00 3 0 G 3051458 Chondrinema 0.00 3 3 S 2994555 Chondrinema litorale 0.00 2 0 F 1501348 Amoebophilaceae 0.00 2 0 G 273135 Candidatus Cardinium 0.00 2 2 S 247481 Candidatus Cardinium hertigii 0.00 2 0 F 2896860 Spirosomataceae 0.00 1 0 G 105 Runella 0.00 1 0 S 106 Runella slithyformis 0.00 1 1 S1 761193 Runella slithyformis DSM 19594 0.00 1 0 G 2674996 Tellurirhabdus 0.00 1 1 S 2907205 Tellurirhabdus bombi 0.00 1 0 F 1937968 Bernardetiaceae 0.00 1 0 G 1937972 Bernardetia 0.00 1 1 G1 2647129 unclassified Bernardetia 0.00 1 0 F 3141701 Flectobacillaceae 0.00 1 1 G 2676247 Aquirufa 0.00 3 0 C 117747 Sphingobacteriia 0.00 3 0 O 200666 Sphingobacteriales 0.00 3 0 F 84566 Sphingobacteriaceae 0.00 2 0 G 84567 Pedobacter 0.00 1 1 S 188932 Pedobacter cryoconitis 0.00 1 1 S 1503925 Pedobacter lusitanus 0.00 1 1 G 423349 Mucilaginibacter 0.00 8 0 P 1090 Chlorobiota 0.00 8 0 C 191410 Chlorobiia 0.00 8 0 O 191411 Chlorobiales 0.00 8 0 F 2968741 Chloroherpetonaceae 0.00 8 0 G 100715 Chloroherpeton 0.00 8 0 S 100716 Chloroherpeton thalassium 0.00 8 8 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 0 P 1134404 Ignavibacteriota 0.00 1 0 C 795747 Ignavibacteria 0.00 1 0 O 795748 Ignavibacteriales 0.00 1 0 F 795749 Ignavibacteriaceae 0.00 1 0 G 795750 Ignavibacterium 0.00 1 0 G1 2639715 unclassified Ignavibacterium 0.00 1 1 S 2651167 Ignavibacterium sp. 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 1 O 1853224 Rhodothermales 0.00 1 0 P 142182 Gemmatimonadota 0.00 1 0 C 219685 Gemmatimonadia 0.00 1 0 O 219686 Gemmatimonadales 0.00 1 0 F 219687 Gemmatimonadaceae 0.00 1 0 G 173479 Gemmatimonas 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.21 391 2 D1 1783257 PVC group 0.14 267 0 P 203682 Planctomycetota 0.12 229 173 C 203683 Planctomycetia 0.01 26 0 O 2691356 Isosphaerales 0.01 26 16 F 1763524 Isosphaeraceae 0.00 9 0 G 1763521 Paludisphaera 0.00 9 9 S 1387353 Paludisphaera borealis 0.00 1 0 G 127 Isosphaera 0.00 1 0 S 128 Isosphaera pallida 0.00 1 1 S1 575540 Isosphaera pallida ATCC 43644 0.01 11 0 O 112 Planctomycetales 0.01 11 1 F 126 Planctomycetaceae 0.00 6 0 G 118 Planctomyces 0.00 6 0 G1 2648843 unclassified Planctomyces 0.00 4 4 S 1632864 Planctomyces sp. SH-PL14 0.00 2 2 S 1636152 Planctomyces sp. SH-PL62 0.00 3 3 G 1649453 Gimesia 0.00 1 0 G 1649480 Planctopirus 0.00 1 1 S 2528019 Planctopirus ephydatiae 0.01 10 0 O 2691355 Gemmatales 0.01 10 0 F 1914233 Gemmataceae 0.00 4 0 G 2807415 Urbifossiella 0.00 4 4 S 2528023 Urbifossiella limnaea 0.00 3 0 G 1382832 Telmatocola 0.00 3 3 S 1123043 Telmatocola sphagniphila 0.00 2 0 G 113 Gemmata 0.00 2 2 S 114 Gemmata obscuriglobus 0.00 1 0 G 2774146 Frigoriglobus 0.00 1 1 S 2774151 Frigoriglobus tundricola 0.00 9 0 O 2691354 Pirellulales 0.00 5 2 F 2691357 Pirellulaceae 0.00 1 0 G 123 Pirellula 0.00 1 0 G1 2639138 unclassified Pirellula 0.00 1 1 S 1632865 Pirellula sp. SH-Sr6A 0.00 1 1 G 2795779 Rosistilla 0.00 1 0 G 2807414 Anatilimnocola 0.00 1 1 S 2528021 Anatilimnocola aggregata 0.00 3 0 F 2691358 Thermoguttaceae 0.00 3 0 G 1676125 Thermogutta 0.00 3 3 S 1331910 Thermogutta terrifontis 0.00 1 1 F 2691359 Lacipirellulaceae 0.02 29 0 C 2897345 Candidatus Uabimicrobiia 0.02 29 0 O 2897347 Candidatus Uabimicrobiales 0.02 29 0 F 2897348 Candidatus Uabimicrobiaceae 0.02 29 0 G 2897349 Candidatus Uabimicrobium 0.02 29 29 S 2596890 Candidatus Uabimicrobium amorphum 0.00 9 0 C 666505 Phycisphaerae 0.00 5 0 O 1771349 Tepidisphaerales 0.00 5 0 F 1771355 Tepidisphaeraceae 0.00 5 0 G 2807511 Humisphaera 0.00 5 5 S 2807512 Humisphaera borealis 0.00 3 0 O 2483366 Sedimentisphaerales 0.00 3 0 F 2690158 Anaerohalosphaeraceae 0.00 3 0 G 2690159 Anaerohalosphaera 0.00 3 3 S 1936003 Anaerohalosphaera lusitana 0.00 1 0 O 666506 Phycisphaerales 0.00 1 0 F 666507 Phycisphaeraceae 0.00 1 0 G 2913022 Mucisphaera 0.00 1 1 S 2527982 Mucisphaera calidilacus 0.04 83 1 P 74201 Verrucomicrobiota 0.03 53 0 P1 326457 Verrucomicrobiota incertae sedis 0.03 53 0 G 1541670 Methylacidimicrobium 0.03 53 53 G1 2730358 unclassified Methylacidimicrobium 0.01 15 0 C 203494 Verrucomicrobiia 0.01 15 0 O 48461 Verrucomicrobiales 0.01 14 0 F 203557 Verrucomicrobiaceae 0.00 7 0 G 2735 Verrucomicrobium 0.00 7 0 G1 2625155 unclassified Verrucomicrobium 0.00 7 7 S 1882831 Verrucomicrobium sp. GAS474 0.00 7 0 G 2911469 Sulfuriroseicoccus 0.00 7 7 S 2707525 Sulfuriroseicoccus oceanibius 0.00 1 0 F 1647988 Akkermansiaceae 0.00 1 1 G 239934 Akkermansia 0.01 12 3 C 414999 Opitutia 0.00 7 0 O 415000 Opitutales 0.00 7 5 F 134623 Opitutaceae 0.00 2 0 G 2892920 Synoicihabitans 0.00 2 2 S 2909285 Synoicihabitans lomoniglobus 0.00 2 0 O 415001 Puniceicoccales 0.00 2 0 O1 3056381 Puniceicoccales incertae sedis 0.00 2 0 G 3049269 Candidatus Pelagisphaera 0.00 2 2 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 C 134549 Spartobacteria 0.00 1 0 G 134550 Candidatus Xiphinematobacter 0.00 1 0 G1 2648876 unclassified Candidatus Xiphinematobacter 0.00 1 1 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.02 37 0 P 204428 Chlamydiota 0.02 37 32 C 204429 Chlamydiia 0.00 4 0 O 1963360 Parachlamydiales 0.00 2 0 F 92713 Parachlamydiaceae 0.00 2 0 G 282132 Candidatus Protochlamydia 0.00 2 2 S 389348 Candidatus Protochlamydia naegleriophila 0.00 2 0 F 92714 Waddliaceae 0.00 2 0 G 71666 Waddlia 0.00 2 0 S 71667 Waddlia chondrophila 0.00 2 2 S1 716544 Waddlia chondrophila WSU 86-1044 0.00 1 0 O 51291 Chlamydiales 0.00 1 0 F 809 Chlamydiaceae 0.00 1 0 F1 1113537 Chlamydia/Chlamydophila group 0.00 1 0 G 810 Chlamydia 0.00 1 0 S 83556 Chlamydia felis 0.00 1 1 S1 264202 Chlamydia felis Fe/C-56 0.00 1 0 P 67812 Candidatus Omnitrophota 0.00 1 0 G 2789201 Candidatus Velamenicoccus 0.00 1 1 S 1930593 Candidatus Velamenicoccus archaeovorus 0.00 1 0 P 256845 Lentisphaerota 0.00 1 0 C 1313211 Lentisphaeria 0.00 1 0 O 278081 Lentisphaerales 0.00 1 0 F 566277 Lentisphaeraceae 0.00 1 0 G 256846 Lentisphaera 0.00 1 1 S 1658616 Lentisphaera profundi 0.04 72 0 P 29547 Campylobacterota 0.04 72 0 C 3031852 Epsilonproteobacteria 0.04 72 0 O 213849 Campylobacterales 0.04 69 0 F 2932623 Sulfurospirillaceae 0.04 69 0 G 57665 Sulfurospirillum 0.04 69 0 S 66821 Sulfurospirillum multivorans 0.04 69 69 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 202746 Sulfurimonas 0.00 2 2 S 2672570 Sulfurimonas aquatica 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 210 Helicobacter pylori 0.02 35 0 P 2818505 Myxococcota 0.02 29 0 P1 3031711 Polyangia 0.01 28 2 O 3031712 Polyangiales 0.01 26 0 F 49 Polyangiaceae 0.01 25 0 G 39643 Sorangium 0.01 25 25 S 56 Sorangium cellulosum 0.00 1 0 G 55 Polyangium 0.00 1 1 S 2567896 Polyangium aurulentum 0.00 1 0 O 3031713 Nannocystales 0.00 1 0 F 224463 Nannocystaceae 0.00 1 0 G 53 Nannocystis 0.00 1 1 S 2995304 Nannocystis poenicansa 0.00 6 0 C 32015 Myxococcia 0.00 6 0 O 29 Myxococcales 0.00 6 4 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 32 Myxococcus 0.00 1 1 S 2813577 Myxococcus landrumus 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 1 G 161492 Anaeromyxobacter 0.02 29 0 P 203691 Spirochaetota 0.02 29 0 C 203692 Spirochaetia 0.01 28 0 O 136 Spirochaetales 0.01 16 0 F 1643685 Borreliaceae 0.01 14 0 G 64895 Borreliella 0.01 11 11 S 29519 Borreliella garinii 0.00 3 3 S 100177 Borreliella lusitaniae 0.00 2 2 G 138 Borrelia 0.00 6 0 F 2791015 Sphaerochaetaceae 0.00 6 0 G 3062336 Parasphaerochaeta 0.00 6 0 S 273376 Parasphaerochaeta coccoides 0.00 6 6 S1 760011 Parasphaerochaeta coccoides DSM 17374 0.00 5 0 F 2845253 Treponemataceae 0.00 5 0 G 157 Treponema 0.00 5 0 S 88058 Treponema primitia 0.00 5 5 S1 545694 Treponema primitia ZAS-2 0.00 1 0 F 137 Spirochaetaceae 0.00 1 0 G 2035349 Oceanispirochaeta 0.00 1 1 S 2518645 Oceanispirochaeta crateris 0.00 1 0 O 1643688 Leptospirales 0.00 1 0 F 170 Leptospiraceae 0.00 1 1 G 171 Leptospira 0.01 22 0 P 57723 Acidobacteriota 0.01 19 0 C 533205 Holophagae 0.01 17 0 O 574975 Holophagales 0.01 17 0 F 574976 Holophagaceae 0.01 17 17 G 44675 Geothrix 0.00 2 0 O 533206 Acanthopleuribacterales 0.00 2 0 F 533207 Acanthopleuribacteraceae 0.00 2 0 G 2915177 Sulfidibacter 0.00 2 2 S 2818388 Sulfidibacter corallicola 0.00 3 0 C 1813735 Vicinamibacteria 0.00 3 0 O 2910145 Vicinamibacterales 0.00 3 0 F 2211325 Vicinamibacteraceae 0.00 3 3 G 2004797 Luteitalea 0.01 22 0 P 74152 Elusimicrobiota 0.01 21 0 C 641853 Elusimicrobia 0.01 21 0 O 641854 Elusimicrobiales 0.01 21 0 F 641876 Elusimicrobiaceae 0.01 21 0 G 423604 Elusimicrobium 0.01 21 0 S 423605 Elusimicrobium minutum 0.01 21 21 S1 445932 Elusimicrobium minutum Pei191 0.00 1 0 C 447830 Endomicrobiia 0.00 1 0 O 1783344 Endomicrobiales 0.00 1 0 F 1783343 Endomicrobiaceae 0.00 1 0 G 1408194 Endomicrobium 0.00 1 1 S 1408204 Candidatus Endomicrobium trichonymphae 0.01 18 0 P 3018035 Bdellovibrionota 0.01 17 0 C 3031419 Bacteriovoracia 0.01 17 0 O 2024979 Bacteriovoracales 0.01 12 0 F 263369 Bacteriovoracaceae 0.00 9 0 G 146784 Bacteriovorax 0.00 9 9 S 960 Bacteriovorax stolpii 0.00 3 0 G 263370 Peredibacter 0.00 3 3 S 28202 Peredibacter starrii 0.00 5 0 F 1652132 Halobacteriovoraceae 0.00 5 0 G 1652133 Halobacteriovorax 0.00 5 0 G1 2639665 unclassified Halobacteriovorax 0.00 5 5 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 0 G 958 Bdellovibrio 0.00 1 1 S 959 Bdellovibrio bacteriovorus 0.01 16 0 D1 2323 Bacteria incertae sedis 0.01 16 0 D2 1783234 Bacteria candidate phyla 0.00 7 2 P 95818 Candidatus Saccharibacteria 0.00 5 0 C 2093818 Candidatus Saccharimonadia 0.00 3 0 O 2093825 Candidatus Saccharimonadales 0.00 3 0 F 2171986 Candidatus Saccharimonadaceae 0.00 3 0 G 1331051 Candidatus Saccharimonas 0.00 3 3 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 2 0 O 2093819 Candidatus Nanosynbacterales 0.00 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 2 2 G 2093823 Candidatus Nanosynbacter 0.00 6 0 D3 95901 Candidatus Dependentiae 0.00 6 0 C 2497643 Candidatus Babeliae 0.00 6 0 O 2497644 Candidatus Babeliales 0.00 6 0 F 2953756 Candidatus Chromulinivoraceae 0.00 6 0 G 2953757 Candidatus Chromulinivorax 0.00 6 6 S 2066483 Candidatus Chromulinivorax destructor 0.00 2 0 D3 1783273 Patescibacteria group 0.00 2 0 D4 1794810 Microgenomates group 0.00 2 0 D5 2715732 Microgenomates group incertae sedis 0.00 2 0 F 2715733 Candidatus Chazhemtobacteraceae 0.00 2 0 G 2715734 Candidatus Chazhemtobacterium 0.00 2 2 S 2715735 Candidatus Chazhemtobacterium aquaticus 0.00 1 0 P 1383058 Candidatus Fervidibacterota 0.00 1 0 G 1448928 Candidatus Fervidibacter 0.00 1 1 S 1448929 Candidatus Fervidibacter sacchari 0.00 8 0 P 200930 Deferribacterota 0.00 8 0 C 68337 Deferribacteres 0.00 8 3 O 191393 Deferribacterales 0.00 3 0 F 2945022 Flexistipitaceae 0.00 3 0 G 2351 Flexistipes 0.00 3 0 S 2352 Flexistipes sinusarabici 0.00 3 3 S1 717231 Flexistipes sinusarabici DSM 4947 0.00 2 0 F 2945021 Calditerrivibrionaceae 0.00 2 0 G 545865 Calditerrivibrio 0.00 2 0 S 477976 Calditerrivibrio nitroreducens 0.00 2 2 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 8 4 P 40117 Nitrospirota 0.00 3 0 C 203693 Nitrospiria 0.00 3 0 O 189778 Nitrospirales 0.00 3 0 F 189779 Nitrospiraceae 0.00 3 0 G 1234 Nitrospira 0.00 3 3 S 2973512 Nitrospira tepida 0.00 1 0 C 2811502 Thermodesulfovibrionia 0.00 1 0 O 2811503 Thermodesulfovibrionales 0.00 1 0 F 2811505 Dissulfurispiraceae 0.00 1 0 G 2811506 Dissulfurispira 0.00 1 1 S 2715679 Dissulfurispira thermophila 0.00 6 0 P 3002442 Thermodesulfobiota 0.00 6 0 C 3002443 Thermodesulfobiia 0.00 6 0 O 3002444 Thermodesulfobiales 0.00 6 0 F 227387 Thermodesulfobiaceae 0.00 6 6 G 227388 Thermodesulfobium 0.00 5 0 P 200783 Aquificota 0.00 5 0 C 187857 Aquificia 0.00 5 0 O 32069 Aquificales 0.00 4 0 F 224027 Hydrogenothermaceae 0.00 4 4 G 212790 Sulfurihydrogenibium 0.00 1 0 F 64898 Aquificaceae 0.00 1 0 G 168657 Hydrogenobaculum 0.00 1 0 G1 2622382 unclassified Hydrogenobaculum 0.00 1 1 S 380749 Hydrogenobaculum sp. Y04AAS1 0.00 3 0 P 32066 Fusobacteriota 0.00 3 0 C 203490 Fusobacteriia 0.00 3 1 O 203491 Fusobacteriales 0.00 2 0 F 203492 Fusobacteriaceae 0.00 2 1 G 848 Fusobacterium 0.00 1 1 S 76857 Fusobacterium polymorphum 0.00 2 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.00 2 0 P 1293497 Nitrospinota 0.00 2 0 C 1293498 Nitrospinia 0.00 2 0 O 1293499 Nitrospinales 0.00 2 0 F 407032 Nitrospinaceae 0.00 2 0 G 35800 Nitrospina 0.00 2 2 S 1323948 Nitrospina watsonii 0.00 2 0 P 200938 Chrysiogenota 0.00 2 0 C 118001 Chrysiogenia 0.00 2 0 O 189769 Chrysiogenales 0.00 2 0 F 189770 Chrysiogenaceae 0.00 2 0 G 393029 Desulfurispirillum 0.00 2 2 S 936456 Desulfurispirillum indicum 0.00 2 0 D1 68525 delta/epsilon subdivisions 0.00 2 0 C 28221 Deltaproteobacteria 0.00 2 0 O 1779134 Bradymonadales 0.00 1 0 F 1779135 Bradymonadaceae 0.00 1 0 G 1779136 Bradymonas 0.00 1 1 S 1548548 Bradymonas sediminis 0.00 1 0 F 2946505 Microvenatoraceae 0.00 1 0 G 2946507 Microvenator 0.00 1 1 S 2600177 Microvenator marinus 0.00 1 0 P 508458 Synergistota 0.00 1 0 C 649775 Synergistia 0.00 1 0 O 649776 Synergistales 0.00 1 0 F 3029085 Aminithiophilaceae 0.00 1 0 G 3029078 Aminithiophilus 0.00 1 1 S 3029084 Aminithiophilus ramosus 0.00 1 0 P 1930617 Calditrichota 0.00 1 0 C 1962850 Calditrichia 0.00 1 0 O 1962852 Calditrichales 0.00 1 0 F 1962854 Calditrichaceae 0.00 1 0 G 187144 Caldithrix 0.00 1 0 S 187145 Caldithrix abyssi 0.00 1 1 S1 880073 Caldithrix abyssi DSM 13497 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 6 0 D 10239 Viruses 0.00 6 0 D1 2731341 Duplodnaviria 0.00 6 0 K 2731360 Heunggongvirae 0.00 6 0 P 2731618 Uroviricota 0.00 6 0 C 2731619 Caudoviricetes 0.00 5 0 F 2946170 Straboviridae 0.00 5 0 F1 1198136 Tevenvirinae 0.00 5 0 G 10663 Tequatrovirus 0.00 4 0 S 2844199 Tequatrovirus gee4507 0.00 4 4 S1 2502306 Escherichia phage vB_EcoM_G4507 0.00 1 0 S 2846203 Tequatrovirus shfml11 0.00 1 1 S1 1863008 Shigella phage SHFML-11 0.00 1 0 G 2843396 Jouyvirus 0.00 1 0 S 2844249 Jouyvirus ev207 0.00 1 1 S1 2847062 Escherichia phage ev207