15.35 298 298 U 0 unclassified 84.65 1644 13 R 1 root 78.17 1518 0 R1 131567 cellular organisms 78.17 1518 110 D 2 Bacteria 43.72 849 17 P 1224 Pseudomonadota 31.57 613 52 C 1236 Gammaproteobacteria 14.83 288 0 O 135614 Lysobacterales 14.78 287 0 F 32033 Lysobacteraceae 14.73 286 0 G 338 Xanthomonas 14.73 286 286 S 29447 Xanthomonas albilineans 0.05 1 1 G 40323 Stenotrophomonas 0.05 1 1 F 1775411 Rhodanobacteraceae 9.63 187 8 O 91347 Enterobacterales 7.83 152 16 F 543 Enterobacteriaceae 3.96 77 0 G 561 Escherichia 3.96 77 67 S 562 Escherichia coli 0.46 9 9 S1 1322345 Escherichia coli ATCC 25922 0.05 1 1 S1 2874053 Escherichia coli O25:H1 1.08 21 0 G 590 Salmonella 1.08 21 2 S 28901 Salmonella enterica 0.98 19 0 S1 59201 Salmonella enterica subsp. enterica 0.26 5 5 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.21 4 4 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.21 4 3 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.05 1 1 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.10 2 2 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.10 2 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.10 2 2 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.05 1 1 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.05 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.57 11 0 G 547 Enterobacter 0.57 11 0 G1 354276 Enterobacter cloacae complex 0.36 7 7 S 299767 Enterobacter ludwigii 0.15 3 3 S 158836 Enterobacter hormaechei 0.05 1 1 S 208224 Enterobacter kobei 0.51 10 0 F1 2890311 Klebsiella/Raoultella group 0.51 10 0 G 570 Klebsiella 0.41 8 8 S 573 Klebsiella pneumoniae 0.05 1 1 S 548 Klebsiella aerogenes 0.05 1 1 S 1463165 Klebsiella quasipneumoniae 0.46 9 6 F1 36866 unclassified Enterobacteriaceae 0.15 3 3 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.15 3 0 G 544 Citrobacter 0.15 3 0 G1 1344959 Citrobacter freundii complex 0.05 1 1 S 67827 Citrobacter werkmanii 0.05 1 1 S 67828 Citrobacter gillenii 0.05 1 0 G2 2816438 unclassified Citrobacter freundii complex 0.05 1 1 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.05 1 0 G 620 Shigella 0.05 1 1 S 623 Shigella flexneri 0.05 1 0 G 2055880 Pseudescherichia 0.05 1 1 S 566 Pseudescherichia vulneris 0.05 1 0 G 1330546 Pluralibacter 0.05 1 1 S 61647 Pluralibacter gergoviae 0.05 1 0 G 1081630 Candidatus Schneideria 0.05 1 1 S 1081631 Candidatus Schneideria nysicola 0.05 1 0 G 82976 Buttiauxella 0.05 1 0 G1 2634062 unclassified Buttiauxella 0.05 1 1 S 2986951 Buttiauxella sp. WJP83 0.51 10 0 F 1903409 Erwiniaceae 0.41 8 0 G 551 Erwinia 0.41 8 8 S 1922217 Candidatus Erwinia haradaeae 0.05 1 0 G 32199 Buchnera 0.05 1 1 S 9 Buchnera aphidicola 0.05 1 1 G 53335 Pantoea 0.36 7 0 F 2812006 Bruguierivoracaceae 0.36 7 0 G 84565 Sodalis 0.26 5 5 S 2697027 Sodalis ligni 0.10 2 0 S 1486991 Candidatus Sodalis pierantonius 0.10 2 2 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.21 4 0 F 1903414 Morganellaceae 0.15 3 0 G 581 Morganella 0.15 3 3 S 582 Morganella morganii 0.05 1 0 G 637 Arsenophonus 0.05 1 0 G1 2627083 unclassified Arsenophonus 0.05 1 1 S 3041619 Arsenophonus sp. aPb 0.15 3 0 F 1903411 Yersiniaceae 0.10 2 2 G 1927833 Candidatus Fukatsuia 0.05 1 0 G 613 Serratia 0.05 1 0 S 82996 Serratia plymuthica 0.05 1 1 S1 1006598 Serratia plymuthica RVH1 0.10 2 1 F 1903410 Pectobacteriaceae 0.05 1 0 G 122277 Pectobacterium 0.05 1 1 S 1905730 Pectobacterium parmentieri 0.05 1 0 F 1903416 Budviciaceae 0.05 1 0 G 2172100 Limnobaculum 0.05 1 1 S 2498113 Limnobaculum zhutongyuii 1.39 27 1 O 135622 Alteromonadales 1.08 21 0 F 267888 Pseudoalteromonadaceae 0.67 13 0 G 2834759 Flocculibacter 0.67 13 13 S 2744479 Flocculibacter collagenilyticus 0.41 8 0 G 53246 Pseudoalteromonas 0.36 7 0 G1 194690 unclassified Pseudoalteromonas 0.31 6 6 S 649161 Pseudoalteromonas sp. 3J6 0.05 1 1 S 2785910 Pseudoalteromonas sp. A41-2 0.05 1 1 S 161398 Pseudoalteromonas phenolica 0.10 2 0 F 72275 Alteromonadaceae 0.05 1 0 G 2894574 Saccharobesus 0.05 1 1 S 2172099 Saccharobesus litoralis 0.05 1 0 F1 2903219 Alteromonas/Salinimonas group 0.05 1 0 G 226 Alteromonas 0.05 1 1 S 28108 Alteromonas macleodii 0.10 2 0 F 267890 Shewanellaceae 0.10 2 1 G 22 Shewanella 0.05 1 0 G1 196818 unclassified Shewanella 0.05 1 1 S 2746932 Shewanella sp. MTB7 0.05 1 0 F 267892 Ferrimonadaceae 0.05 1 1 G 44011 Ferrimonas 0.77 15 0 O 72274 Pseudomonadales 0.72 14 1 F 135621 Pseudomonadaceae 0.62 12 7 G 286 Pseudomonas 0.10 2 0 G1 136841 Pseudomonas aeruginosa group 0.10 2 2 S 287 Pseudomonas aeruginosa 0.05 1 0 G1 196821 unclassified Pseudomonas 0.05 1 1 S 2762896 Pseudomonas sp. MPDS 0.05 1 1 S 2738125 Pseudomonas hefeiensis 0.05 1 0 G1 136845 Pseudomonas putida group 0.05 1 1 S 303 Pseudomonas putida 0.05 1 0 G 1654787 Thiopseudomonas 0.05 1 1 S 1697053 Thiopseudomonas alkaliphila 0.05 1 0 F 3085096 Ketobacteraceae 0.05 1 0 G 2025617 Ketobacter 0.05 1 1 S 1917421 Ketobacter alkanivorans 0.67 13 0 O 135623 Vibrionales 0.67 13 0 F 641 Vibrionaceae 0.51 10 4 G 662 Vibrio 0.15 3 3 S 2572923 Vibrio taketomensis 0.10 2 2 S 666 Vibrio cholerae 0.05 1 0 S 52443 Vibrio tapetis 0.05 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.15 3 2 G 657 Photobacterium 0.05 1 1 S 553611 Photobacterium leiognathi 0.41 8 0 O 135619 Oceanospirillales 0.31 6 0 F 28256 Halomonadaceae 0.15 3 0 F1 114403 Zymobacter group 0.10 2 0 G 33073 Zymobacter 0.10 2 2 S 33074 Zymobacter palmae 0.05 1 0 G 114185 Candidatus Carsonella 0.05 1 0 S 114186 Candidatus Carsonella ruddii 0.05 1 1 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.10 2 1 G 504090 Kushneria 0.05 1 1 S 657387 Kushneria phosphatilytica 0.05 1 0 G 2745 Halomonas 0.05 1 1 S 3031727 Halomonas piscis 0.10 2 0 F 2823145 Pleioneaceae 0.10 2 0 G 1502941 Pleionea 0.10 2 2 S 3070815 Pleionea litopenaei 0.26 5 0 O 2887326 Moraxellales 0.26 5 0 F 468 Moraxellaceae 0.21 4 0 G 469 Acinetobacter 0.10 2 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.10 2 0 S 48296 Acinetobacter pittii 0.10 2 2 S1 871585 Acinetobacter pittii PHEA-2 0.05 1 1 S 756892 Acinetobacter indicus 0.05 1 1 S 202956 Acinetobacter towneri 0.05 1 0 G 2824158 Aquirhabdus 0.05 1 1 S 2283318 Aquirhabdus parva 0.21 4 0 O 135625 Pasteurellales 0.21 4 0 F 712 Pasteurellaceae 0.21 4 0 G 745 Pasteurella 0.21 4 0 S 747 Pasteurella multocida 0.21 4 4 S1 115545 Pasteurella multocida subsp. septica 0.21 4 0 O 135618 Methylococcales 0.21 4 3 F 403 Methylococcaceae 0.05 1 0 G 762296 Methylovulum 0.05 1 1 S 1704499 Methylovulum psychrotolerans 0.10 2 0 O 72273 Thiotrichales 0.05 1 0 F 135616 Piscirickettsiaceae 0.05 1 0 G 933 Thiomicrospira 0.05 1 0 S 92245 Thiomicrospira aerophila 0.05 1 1 S1 717772 Thiomicrospira aerophila AL3 0.05 1 0 F 135617 Thiotrichaceae 0.05 1 1 G 1030 Thiothrix 0.10 2 0 O 1706369 Cellvibrionales 0.10 2 0 F 1706371 Cellvibrionaceae 0.05 1 0 G 10 Cellvibrio 0.05 1 0 G1 2624793 unclassified Cellvibrio 0.05 1 1 S 1987723 Cellvibrio sp. PSBB006 0.05 1 0 G 359337 Marinimicrobium 0.05 1 0 G1 2632100 unclassified Marinimicrobium 0.05 1 1 S 3022676 Marinimicrobium sp. C6131 0.10 2 1 O 118969 Legionellales 0.05 1 0 F 118968 Coxiellaceae 0.05 1 0 G 254245 Aquicella 0.05 1 1 S 254247 Aquicella siphonis 0.10 2 0 C1 118884 Gammaproteobacteria incertae sedis 0.05 1 0 C2 32036 sulfur-oxidizing symbionts 0.05 1 0 G 2686004 Candidatus Vondammii 0.05 1 0 G1 2687300 unclassified Candidatus Vondammii 0.05 1 1 S 2687299 Candidatus Vondammii sp. HM_W22 0.05 1 0 G 204619 Candidatus Nardonella 0.05 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.05 1 0 O 135613 Chromatiales 0.05 1 0 F 1046 Chromatiaceae 0.05 1 1 G 1056 Thiocapsa 0.05 1 0 O 135615 Cardiobacteriales 0.05 1 0 F 868 Cardiobacteriaceae 0.05 1 0 G 869 Dichelobacter 0.05 1 1 S 870 Dichelobacter nodosus 10.56 205 4 C 28211 Alphaproteobacteria 8.14 158 0 O 204441 Rhodospirillales 8.03 156 0 F 2844601 Stellaceae 8.03 156 0 G 93 Stella 8.03 156 156 S 94 Stella humosa 0.10 2 0 F 433 Acetobacteraceae 0.10 2 0 G 512381 Acidisoma 0.10 2 0 G1 2634065 unclassified Acidisoma 0.10 2 2 S 3040935 Acidisoma sp. PAMC 29798 1.91 37 0 O 204458 Caulobacterales 1.91 37 0 F 76892 Caulobacteraceae 1.91 37 0 G 41275 Brevundimonas 1.91 37 0 G1 2622653 unclassified Brevundimonas 1.91 37 37 S 2560058 Brevundimonas sp. Bb-A 0.15 3 2 O 356 Hyphomicrobiales 0.05 1 0 F 82115 Rhizobiaceae 0.05 1 0 F1 227292 Sinorhizobium/Ensifer group 0.05 1 0 G 28105 Sinorhizobium 0.05 1 0 S 382 Sinorhizobium meliloti 0.05 1 1 S1 1041157 Sinorhizobium meliloti WSM1022 0.05 1 0 O 204455 Rhodobacterales 0.05 1 0 F 31989 Paracoccaceae 0.05 1 1 G 265 Paracoccus 0.05 1 1 O 204457 Sphingomonadales 0.05 1 0 O 255473 Parvularculales 0.05 1 0 F 255474 Parvularculaceae 0.05 1 0 G 1795639 Aquisalinus 0.05 1 1 S 1526572 Aquisalinus flavus 0.67 13 0 C 28216 Betaproteobacteria 0.57 11 3 O 80840 Burkholderiales 0.26 5 0 F 119060 Burkholderiaceae 0.15 3 0 G 48736 Ralstonia 0.15 3 0 G1 3116862 Ralstonia solanacearum species complex 0.15 3 3 S 305 Ralstonia solanacearum 0.05 1 0 G 47670 Lautropia 0.05 1 1 S 47671 Lautropia mirabilis 0.05 1 0 G 1822464 Paraburkholderia 0.05 1 1 S 2571748 Paraburkholderia acidisoli 0.15 3 1 F 75682 Oxalobacteraceae 0.05 1 0 G 401469 Undibacterium 0.05 1 0 G1 2630295 unclassified Undibacterium 0.05 1 1 S 3048609 Undibacterium sp. CCC3.4 0.05 1 0 G 884214 Candidatus Zinderia 0.05 1 0 G1 3077950 unclassified Candidatus Zinderia 0.05 1 1 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.10 2 0 O 206351 Neisseriales 0.10 2 0 F 481 Neisseriaceae 0.10 2 1 G 482 Neisseria 0.05 1 1 S 487 Neisseria meningitidis 0.05 1 0 C 580370 Zetaproteobacteria 0.05 1 0 O 580371 Mariprofundales 0.05 1 0 F 580372 Mariprofundaceae 0.05 1 1 G 377315 Mariprofundus 24.82 482 35 D1 1783272 Terrabacteria group 17.20 334 7 P 1239 Bacillota 15.29 297 31 C 91061 Bacilli 7.52 146 7 O 186826 Lactobacillales 3.35 65 0 F 81852 Enterococcaceae 3.19 62 3 G 1350 Enterococcus 2.73 53 53 S 1351 Enterococcus faecalis 0.26 5 5 S 1352 Enterococcus faecium 0.05 1 1 S 44008 Enterococcus cecorum 0.15 3 0 G 51668 Tetragenococcus 0.15 3 3 S 51669 Tetragenococcus halophilus 2.01 39 2 F 33958 Lactobacillaceae 0.88 17 11 G 46255 Weissella 0.15 3 3 S 137591 Weissella cibaria 0.10 2 2 S 1249 Weissella paramesenteroides 0.05 1 1 S 1583 Weissella confusa 0.26 5 0 G 2742598 Limosilactobacillus 0.21 4 4 S 1598 Limosilactobacillus reuteri 0.05 1 1 S 1613 Limosilactobacillus fermentum 0.26 5 0 G 2767842 Lactiplantibacillus 0.21 4 4 S 1590 Lactiplantibacillus plantarum 0.05 1 1 S 1589 Lactiplantibacillus pentosus 0.15 3 3 G 2767889 Loigolactobacillus 0.10 2 0 G 2767887 Ligilactobacillus 0.05 1 1 S 1624 Ligilactobacillus salivarius 0.05 1 1 S 89059 Ligilactobacillus acidipiscis 0.05 1 0 G 2767874 Acetilactobacillus 0.05 1 1 S 1720083 Acetilactobacillus jinshanensis 0.05 1 0 G 2767878 Bombilactobacillus 0.05 1 1 S 1303590 Bombilactobacillus bombi 0.05 1 0 G 2767893 Lentilactobacillus 0.05 1 0 S 1581 Lentilactobacillus buchneri 0.05 1 0 S1 2737512 Lentilactobacillus buchneri subsp. silagei 0.05 1 1 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 0.05 1 0 G 2759736 Lacticaseibacillus 0.05 1 0 S 1597 Lacticaseibacillus paracasei 0.05 1 1 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.05 1 1 G 46254 Oenococcus 1.70 33 0 F 1300 Streptococcaceae 1.65 32 10 G 1301 Streptococcus 0.51 10 9 S 1308 Streptococcus thermophilus 0.05 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.15 3 3 S 1314 Streptococcus pyogenes 0.10 2 2 S 1345 Streptococcus ferus 0.10 2 2 S 1311 Streptococcus agalactiae 0.10 2 2 S 1313 Streptococcus pneumoniae 0.05 1 1 S 1811193 Streptococcus pantholopis 0.05 1 1 S 1310 Streptococcus sobrinus 0.05 1 1 S 1335 Streptococcus equinus 0.05 1 0 G 1357 Lactococcus 0.05 1 1 S 1358 Lactococcus lactis 0.10 2 0 F 186827 Aerococcaceae 0.10 2 1 G 1375 Aerococcus 0.05 1 1 S 87541 Aerococcus christensenii 6.18 120 6 O 1385 Bacillales 2.99 58 1 F 186817 Bacillaceae 1.91 37 2 G 1386 Bacillus 1.18 23 0 G1 653685 Bacillus subtilis group 0.93 18 0 G2 1938374 Bacillus amyloliquefaciens group 0.88 17 16 S 492670 Bacillus velezensis 0.05 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.05 1 1 S 1390 Bacillus amyloliquefaciens 0.21 4 2 S 1423 Bacillus subtilis 0.05 1 1 S1 86029 Bacillus subtilis subsp. natto 0.05 1 1 S1 135461 Bacillus subtilis subsp. subtilis 0.05 1 0 G2 653388 Bacillus mojavensis subgroup 0.05 1 1 S 260554 Bacillus halotolerans 0.41 8 0 G1 86661 Bacillus cereus group 0.31 6 2 S 1396 Bacillus cereus 0.10 2 2 S1 1454382 Bacillus cereus D17 0.05 1 1 S1 1003239 Bacillus cereus C1L 0.05 1 1 S1 572264 Bacillus cereus 03BB102 0.05 1 1 S 1392 Bacillus anthracis 0.05 1 1 S 64104 Bacillus pseudomycoides 0.15 3 0 G1 1792192 Bacillus altitudinis complex 0.15 3 3 S 293387 Bacillus altitudinis 0.05 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.05 1 1 S 467262 Bacillus sp. T3 0.72 14 0 G 84406 Virgibacillus 0.72 14 14 S 447199 Virgibacillus salarius 0.10 2 0 G 2785518 Radiobacillus 0.10 2 2 S 2594883 Radiobacillus deserti 0.05 1 0 G 2675229 Peribacillus 0.05 1 1 S 264697 Peribacillus muralis 0.05 1 0 G 2675231 Mesobacillus 0.05 1 1 S 285983 Mesobacillus subterraneus 0.05 1 0 G 2675233 Metabacillus 0.05 1 1 G1 2675274 unclassified Metabacillus 0.05 1 0 G 2800373 Priestia 0.05 1 1 S 1404 Priestia megaterium 1.60 31 0 F 90964 Staphylococcaceae 1.60 31 0 G 1279 Staphylococcus 1.08 21 21 S 1280 Staphylococcus aureus 0.10 2 2 S 1283 Staphylococcus haemolyticus 0.10 2 2 S 2044912 Staphylococcus debuckii 0.10 2 2 S 28035 Staphylococcus lugdunensis 0.05 1 1 S 1282 Staphylococcus epidermidis 0.05 1 1 S 1286 Staphylococcus simulans 0.05 1 1 S 70255 Staphylococcus condimenti 0.05 1 1 S 29378 Staphylococcus arlettae 0.57 11 0 F 186820 Listeriaceae 0.57 11 3 G 1637 Listeria 0.26 5 0 S 1638 Listeria ivanovii 0.26 5 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.26 5 5 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.10 2 2 S 1639 Listeria monocytogenes 0.05 1 0 G1 2642072 unclassified Listeria 0.05 1 1 S 1844999 Listeria sp. PSOL-1 0.46 9 0 F 186822 Paenibacillaceae 0.41 8 2 G 44249 Paenibacillus 0.15 3 0 G1 185978 unclassified Paenibacillus 0.05 1 1 S 715179 Paenibacillus sp. sptzw28 0.05 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.05 1 1 S 2741301 Paenibacillus sp. URB8-2 0.05 1 1 S 1406 Paenibacillus polymyxa 0.05 1 1 S 539262 Paenibacillus hunanensis 0.05 1 1 S 79263 Paenibacillus chitinolyticus 0.05 1 0 G 329857 Cohnella 0.05 1 1 S 2507935 Cohnella abietis 0.10 2 0 F 539738 Gemellaceae 0.10 2 2 G 1378 Gemella 0.05 1 0 F 186821 Sporolactobacillaceae 0.05 1 0 G 2077 Sporolactobacillus 0.05 1 1 S 269673 Sporolactobacillus terrae 0.05 1 0 F 186824 Thermoactinomycetaceae 0.05 1 0 G 1348505 Polycladomyces 0.05 1 1 S 1125966 Polycladomyces abyssicola 0.05 1 0 O1 539002 Bacillales incertae sedis 0.05 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.05 1 0 G 33986 Exiguobacterium 0.05 1 0 G1 2644629 unclassified Exiguobacterium 0.05 1 1 S 360911 Exiguobacterium sp. AT1b 1.08 21 0 C 186801 Clostridia 0.57 11 0 O 53433 Halanaerobiales 0.51 10 0 F 53434 Halobacteroidaceae 0.51 10 0 G 42417 Halobacteroides 0.51 10 0 S 42422 Halobacteroides halobius 0.51 10 10 S1 748449 Halobacteroides halobius DSM 5150 0.05 1 0 O1 387655 Halanaerobiales incertae sedis 0.05 1 0 G 1769008 Anoxybacter 0.05 1 1 S 1323375 Anoxybacter fermentans 0.51 10 4 O 186802 Eubacteriales 0.15 3 3 F 31984 Heliobacteriaceae 0.10 2 1 F 216572 Oscillospiraceae 0.05 1 0 G 459786 Oscillibacter 0.05 1 1 S 2763056 Oscillibacter hominis 0.05 1 0 F 31979 Clostridiaceae 0.05 1 0 G 1485 Clostridium 0.05 1 0 G1 2614128 unclassified Clostridium 0.05 1 1 S 2483110 Clostridium sp. JN-1 0.15 3 0 C 909932 Negativicutes 0.10 2 0 O 1843489 Veillonellales 0.10 2 0 F 31977 Veillonellaceae 0.05 1 0 G 906 Megasphaera 0.05 1 1 S 1232428 Megasphaera massiliensis 0.05 1 0 G 29465 Veillonella 0.05 1 1 S 29466 Veillonella parvula 0.05 1 0 O 909929 Selenomonadales 0.05 1 0 F 1843491 Selenomonadaceae 0.05 1 0 G 970 Selenomonas 0.05 1 0 G1 2637378 unclassified Selenomonas 0.05 1 1 S 1884263 Selenomonas sp. oral taxon 920 0.15 3 0 C 1737404 Tissierellia 0.10 2 0 O 1737405 Tissierellales 0.10 2 0 F 1570339 Peptoniphilaceae 0.05 1 0 G 543311 Parvimonas 0.05 1 1 S 33033 Parvimonas micra 0.05 1 0 G 1161127 Murdochiella 0.05 1 1 S 1852373 Murdochiella vaginalis 0.05 1 0 C1 1737407 Tissierellia incertae sedis 0.05 1 0 G 1582879 Ezakiella 0.05 1 1 S 46507 Ezakiella coagulans 0.10 2 0 C 526524 Erysipelotrichia 0.10 2 0 O 526525 Erysipelotrichales 0.10 2 1 F 128827 Erysipelotrichaceae 0.05 1 0 G 1918536 Longicatena 0.05 1 1 S 1796635 Longicatena caecimuris 0.05 1 0 C 1676648 Limnochordia 0.05 1 0 O 1676649 Limnochordales 0.05 1 0 F 1676650 Limnochordaceae 0.05 1 0 G 1676651 Limnochorda 0.05 1 1 G1 2618576 unclassified Limnochorda 2.37 46 0 P 201174 Actinomycetota 2.01 39 0 C 1760 Actinomycetes 0.98 19 0 O 85009 Propionibacteriales 0.93 18 4 F 31957 Propionibacteriaceae 0.67 13 0 G 1912216 Cutibacterium 0.57 11 11 S 1747 Cutibacterium acnes 0.10 2 2 S 33011 Cutibacterium granulosum 0.05 1 1 G 29404 Microlunatus 0.05 1 1 F 85015 Nocardioidaceae 0.57 11 1 O 85006 Micrococcales 0.21 4 0 F 1268 Micrococcaceae 0.21 4 3 G 32207 Rothia 0.05 1 1 S 2047 Rothia dentocariosa 0.10 2 0 F 2805591 Tropherymataceae 0.10 2 0 G 2038 Tropheryma 0.10 2 2 S 2039 Tropheryma whipplei 0.10 2 1 F 85023 Microbacteriaceae 0.05 1 0 G 447237 Frondihabitans 0.05 1 0 G1 2626248 unclassified Frondihabitans 0.05 1 1 S 1446794 Frondihabitans sp. 762G35 0.05 1 0 F 85019 Brevibacteriaceae 0.05 1 1 G 1696 Brevibacterium 0.05 1 1 F 85020 Dermabacteraceae 0.15 3 0 O 85007 Mycobacteriales 0.10 2 0 F 1653 Corynebacteriaceae 0.10 2 2 G 1716 Corynebacterium 0.05 1 0 F 1762 Mycobacteriaceae 0.05 1 1 G 1866885 Mycolicibacterium 0.15 3 0 O 85011 Kitasatosporales 0.15 3 0 F 2062 Streptomycetaceae 0.15 3 0 G 1883 Streptomyces 0.15 3 1 G1 2593676 unclassified Streptomyces 0.05 1 1 S 2099583 Streptomyces sp. ICC1 0.05 1 1 S 2903645 Streptomyces sp. NBC_00310 0.05 1 0 O 85004 Bifidobacteriales 0.05 1 0 F 31953 Bifidobacteriaceae 0.05 1 0 G 1678 Bifidobacterium 0.05 1 0 S 216816 Bifidobacterium longum 0.05 1 1 S1 1931217 Bifidobacterium longum subsp. suillum 0.05 1 0 O 85008 Micromonosporales 0.05 1 0 F 28056 Micromonosporaceae 0.05 1 0 G 168694 Salinispora 0.05 1 0 S 168695 Salinispora tropica 0.05 1 1 S1 369723 Salinispora tropica CNB-440 0.05 1 0 O 85013 Frankiales 0.05 1 0 F 74712 Frankiaceae 0.05 1 0 G 1854 Frankia 0.05 1 1 S 106370 Frankia casuarinae 0.31 6 0 C 84998 Coriobacteriia 0.26 5 0 O 1643822 Eggerthellales 0.26 5 0 F 1643826 Eggerthellaceae 0.15 3 0 G 1926677 Raoultibacter 0.15 3 3 S 1907662 Raoultibacter timonensis 0.05 1 1 G 447020 Adlercreutzia 0.05 1 0 G 2005386 Arabiibacter 0.05 1 1 S 1870985 Arabiibacter massiliensis 0.05 1 0 O 84999 Coriobacteriales 0.05 1 0 F 84107 Coriobacteriaceae 0.05 1 0 G 102106 Collinsella 0.05 1 1 S 74426 Collinsella aerofaciens 0.05 1 0 C 84995 Rubrobacteria 0.05 1 0 O 84996 Rubrobacterales 0.05 1 0 F 84997 Rubrobacteraceae 0.05 1 0 G 42255 Rubrobacter 0.05 1 1 S 2653851 Rubrobacter tropicus 2.21 43 0 D2 1798711 Cyanobacteriota/Melainabacteria group 2.21 43 0 P 1117 Cyanobacteriota 2.21 43 5 C 3028117 Cyanophyceae 1.54 30 0 C1 1301283 Oscillatoriophycideae 1.24 24 0 O 1150 Oscillatoriales 1.13 22 0 F 2934961 Sirenicapillariaceae 1.13 22 0 G 2596745 Limnospira 1.13 22 0 S 147322 Limnospira indica 1.13 22 22 S1 2760438 Limnospira indica BM01 0.10 2 0 F 1892252 Microcoleaceae 0.05 1 1 G 54304 Planktothrix 0.05 1 0 G 1492710 Oxynema 0.05 1 0 S 2874213 Oxynema aestuarii 0.05 1 1 S1 2064643 Oxynema aestuarii AP17 0.31 6 0 O 1118 Chroococcales 0.15 3 0 F 1890449 Microcystaceae 0.15 3 0 G 1125 Microcystis 0.15 3 0 G1 2643300 unclassified Microcystis 0.15 3 3 S 1967666 Microcystis sp. MC19 0.10 2 0 F 1890450 Aphanothecaceae 0.10 2 0 G 1453359 Candidatus Atelocyanobacterium 0.10 2 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.10 2 2 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.05 1 1 F 1890464 Chroococcaceae 0.21 4 0 O 1161 Nostocales 0.10 2 0 F 1185 Rivulariaceae 0.10 2 0 G 373984 Rivularia 0.10 2 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.10 2 2 S 373994 Rivularia sp. PCC 7116 0.05 1 0 F 1162 Nostocaceae 0.05 1 0 G 1163 Anabaena 0.05 1 0 G1 2619674 unclassified Anabaena 0.05 1 1 S 1647413 Anabaena sp. WA102 0.05 1 0 F 1892259 Aphanizomenonaceae 0.05 1 0 G 748770 Dolichospermum 0.05 1 0 S 136073 Dolichospermum compactum 0.05 1 1 S1 1973481 Dolichospermum compactum NIES-806 0.10 2 0 O 1955042 Gloeomargaritales 0.10 2 0 F 1955043 Gloeomargaritaceae 0.10 2 0 G 1188227 Gloeomargarita 0.10 2 0 S 1188228 Gloeomargarita lithophora 0.10 2 2 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.05 1 1 O 307595 Gloeobacterales 0.05 1 0 O 3079749 Leptolyngbyales 0.05 1 0 F 1890438 Leptolyngbyaceae 0.05 1 0 F1 3081713 Leptolyngbya group 0.05 1 0 G 47251 Leptolyngbya 0.05 1 1 S 1184 Leptolyngbya boryana 1.13 22 11 P 544448 Mycoplasmatota 0.36 7 0 C 31969 Mollicutes 0.31 6 0 O 2085 Mycoplasmatales 0.31 6 0 F 2092 Mycoplasmataceae 0.31 6 0 G 2093 Mycoplasma 0.21 4 0 G1 2683645 unclassified Mycoplasma 0.10 2 2 S 2967302 Mycoplasma sp. 1018B 0.05 1 1 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.05 1 1 S 2801918 Mycoplasma sp. E35C 0.05 1 1 S 3004105 Candidatus Mycoplasma mahonii 0.05 1 0 G1 656088 Mycoplasma mycoides group 0.05 1 1 S 1179777 Mycoplasma feriruminatoris 0.05 1 0 O 186328 Entomoplasmatales 0.05 1 0 F 2131 Spiroplasmataceae 0.05 1 0 G 2132 Spiroplasma 0.05 1 1 G1 2637901 unclassified Spiroplasma 0.21 4 0 O 2790996 Mycoplasmoidales 0.15 3 0 F 2790998 Mycoplasmoidaceae 0.15 3 0 G 2791001 Malacoplasma 0.10 2 0 S 28227 Malacoplasma penetrans 0.10 2 2 S1 272633 Malacoplasma penetrans HF-2 0.05 1 1 S 2116 Malacoplasma iowae 0.05 1 0 F 2895623 Metamycoplasmataceae 0.05 1 0 G 2767358 Mycoplasmopsis 0.05 1 1 S 28903 Mycoplasmopsis bovis 0.05 1 0 P 1297 Deinococcota 0.05 1 0 C 188787 Deinococci 0.05 1 0 O 118964 Deinococcales 0.05 1 0 F 183710 Deinococcaceae 0.05 1 1 G 1298 Deinococcus 0.05 1 0 P 67819 Armatimonadota 0.05 1 0 C 1077257 Chthonomonadia 0.05 1 0 O 1077263 Chthonomonadales 0.05 1 0 F 1077264 Chthonomonadaceae 0.05 1 0 G 1077265 Chthonomonas 0.05 1 0 S 454171 Chthonomonas calidirosea 0.05 1 1 S1 1303518 Chthonomonas calidirosea T49 1.60 31 0 P 200940 Thermodesulfobacteriota 1.54 30 0 C 3031651 Desulfuromonadia 1.54 30 1 O 69541 Desulfuromonadales 1.44 28 0 F 213421 Desulfuromonadaceae 1.44 28 28 G 890 Desulfuromonas 0.05 1 0 F 3031665 Geoalkalibacteraceae 0.05 1 0 G 392332 Geoalkalibacter 0.05 1 1 S 483547 Geoalkalibacter subterraneus 0.05 1 0 C 3031451 Desulfobulbia 0.05 1 0 O 3024411 Desulfobulbales 0.05 1 0 F 213121 Desulfobulbaceae 0.05 1 0 G 893 Desulfobulbus 0.05 1 1 S 1986146 Desulfobulbus oralis 0.82 16 0 D1 1783257 PVC group 0.51 10 0 P 74201 Verrucomicrobiota 0.21 4 0 P1 326457 Verrucomicrobiota incertae sedis 0.21 4 0 G 1541670 Methylacidimicrobium 0.21 4 4 G1 2730358 unclassified Methylacidimicrobium 0.15 3 0 C 203494 Verrucomicrobiia 0.15 3 0 O 48461 Verrucomicrobiales 0.15 3 0 F 203557 Verrucomicrobiaceae 0.15 3 0 G 2735 Verrucomicrobium 0.15 3 0 G1 2625155 unclassified Verrucomicrobium 0.15 3 3 S 1882831 Verrucomicrobium sp. GAS474 0.15 3 0 C 414999 Opitutia 0.10 2 0 O 415001 Puniceicoccales 0.10 2 0 O1 3056381 Puniceicoccales incertae sedis 0.10 2 0 G 3049269 Candidatus Pelagisphaera 0.10 2 2 S 2684113 Candidatus Pelagisphaera phototrophica 0.05 1 0 O 415000 Opitutales 0.05 1 1 F 134623 Opitutaceae 0.26 5 0 P 204428 Chlamydiota 0.26 5 5 C 204429 Chlamydiia 0.05 1 0 P 203682 Planctomycetota 0.05 1 1 C 203683 Planctomycetia 0.46 9 0 D1 1783270 FCB group 0.41 8 0 D2 68336 Bacteroidota/Chlorobiota group 0.41 8 0 P 976 Bacteroidota 0.15 3 0 C 200643 Bacteroidia 0.15 3 0 O 171549 Bacteroidales 0.10 2 0 F 171552 Prevotellaceae 0.05 1 0 G 2884814 Pseudoprevotella 0.05 1 1 S 2133944 Pseudoprevotella muciniphila 0.05 1 0 G 2974251 Segatella 0.05 1 1 S 165179 Segatella copri 0.05 1 0 F 2005525 Tannerellaceae 0.05 1 0 G 195950 Tannerella 0.05 1 1 S 28112 Tannerella forsythia 0.15 3 0 C 768503 Cytophagia 0.15 3 0 O 768507 Cytophagales 0.05 1 0 F 89373 Cytophagaceae 0.05 1 0 G 107 Spirosoma 0.05 1 1 S 2666025 Spirosoma endbachense 0.05 1 0 F 1501348 Amoebophilaceae 0.05 1 0 G 273135 Candidatus Cardinium 0.05 1 1 S 247481 Candidatus Cardinium hertigii 0.05 1 0 F 2896860 Spirosomataceae 0.05 1 0 G 332157 Larkinella 0.05 1 1 S 332158 Larkinella insperata 0.10 2 0 C 117743 Flavobacteriia 0.10 2 0 O 200644 Flavobacteriales 0.10 2 0 F 2762318 Weeksellaceae 0.05 1 0 G 1013 Weeksella 0.05 1 1 S 1014 Weeksella virosa 0.05 1 0 F1 2782232 Chryseobacterium group 0.05 1 1 G 59732 Chryseobacterium 0.05 1 0 P 142182 Gemmatimonadota 0.05 1 0 C 219685 Gemmatimonadia 0.05 1 0 O 219686 Gemmatimonadales 0.05 1 0 F 219687 Gemmatimonadaceae 0.05 1 0 G 173479 Gemmatimonas 0.05 1 0 S 173480 Gemmatimonas aurantiaca 0.05 1 1 S1 379066 Gemmatimonas aurantiaca T-27 0.31 6 0 P 32066 Fusobacteriota 0.31 6 0 C 203490 Fusobacteriia 0.31 6 0 O 203491 Fusobacteriales 0.15 3 0 F 1129771 Leptotrichiaceae 0.15 3 1 G 32067 Leptotrichia 0.05 1 1 S 157687 Leptotrichia wadei 0.05 1 1 S 157691 Leptotrichia shahii 0.10 2 0 F 203492 Fusobacteriaceae 0.10 2 0 G 848 Fusobacterium 0.05 1 0 S 850 Fusobacterium mortiferum 0.05 1 1 S1 469616 Fusobacterium mortiferum ATCC 9817 0.05 1 1 S 2764326 Fusobacterium hominis 0.05 1 0 F 3072461 Haliovirgaceae 0.05 1 0 G 3072462 Haliovirga 0.05 1 1 S 2996794 Haliovirga abyssi 0.26 5 0 P 203691 Spirochaetota 0.26 5 0 C 203692 Spirochaetia 0.26 5 1 O 136 Spirochaetales 0.15 3 0 F 2845253 Treponemataceae 0.15 3 0 G 157 Treponema 0.15 3 3 S 409322 Treponema pedis 0.05 1 0 F 1643685 Borreliaceae 0.05 1 0 G 64895 Borreliella 0.05 1 1 S 29519 Borreliella garinii 0.15 3 0 D1 2323 Bacteria incertae sedis 0.15 3 0 D2 1783234 Bacteria candidate phyla 0.10 2 0 D3 95901 Candidatus Dependentiae 0.10 2 0 C 2497643 Candidatus Babeliae 0.10 2 0 O 2497644 Candidatus Babeliales 0.10 2 0 F 2953756 Candidatus Chromulinivoraceae 0.10 2 0 G 2953757 Candidatus Chromulinivorax 0.10 2 2 S 2066483 Candidatus Chromulinivorax destructor 0.05 1 1 P 95818 Candidatus Saccharibacteria 0.10 2 0 P 40117 Nitrospirota 0.10 2 0 C 203693 Nitrospiria 0.10 2 0 O 189778 Nitrospirales 0.10 2 0 F 189779 Nitrospiraceae 0.10 2 0 G 1234 Nitrospira 0.10 2 2 S 42253 Nitrospira moscoviensis 0.05 1 0 P 200783 Aquificota 0.05 1 0 C 187857 Aquificia 0.05 1 0 O 32069 Aquificales 0.05 1 0 F 224027 Hydrogenothermaceae 0.05 1 1 G 212790 Sulfurihydrogenibium 0.05 1 0 P 200918 Thermotogota 0.05 1 0 C 188708 Thermotogae 0.05 1 0 O 1643946 Kosmotogales 0.05 1 0 F 1643948 Kosmotogaceae 0.05 1 0 G 651456 Kosmotoga 0.05 1 0 S 651457 Kosmotoga olearia 0.05 1 1 S1 521045 Kosmotoga olearia TBF 19.5.1 0.05 1 0 P 3018035 Bdellovibrionota 0.05 1 0 C 3031419 Bacteriovoracia 0.05 1 0 O 2024979 Bacteriovoracales 0.05 1 0 F 263369 Bacteriovoracaceae 0.05 1 0 G 263370 Peredibacter 0.05 1 1 S 28202 Peredibacter starrii 0.05 1 0 P 508458 Synergistota 0.05 1 0 C 649775 Synergistia 0.05 1 0 O 649776 Synergistales 0.05 1 0 F 649777 Synergistaceae 0.05 1 0 G 81411 Aminomonas 0.05 1 0 S 81412 Aminomonas paucivorans 0.05 1 1 S1 584708 Aminomonas paucivorans DSM 12260 0.05 1 0 P 29547 Campylobacterota 0.05 1 0 C 3031852 Epsilonproteobacteria 0.05 1 0 O 213849 Campylobacterales 0.05 1 0 F 72294 Campylobacteraceae 0.05 1 1 G 194 Campylobacter 5.82 113 0 D 10239 Viruses 5.82 113 0 D1 2731341 Duplodnaviria 5.82 113 0 K 2731360 Heunggongvirae 5.82 113 0 P 2731618 Uroviricota 5.82 113 0 C 2731619 Caudoviricetes 5.82 113 0 F 2946170 Straboviridae 5.82 113 0 F1 1198136 Tevenvirinae 5.82 113 0 G 10663 Tequatrovirus 5.82 113 0 S 2844199 Tequatrovirus gee4507 5.82 113 113 S1 2502306 Escherichia phage vB_EcoM_G4507