9.16 12266 12266 U 0 unclassified 90.84 121704 30 R 1 root 90.73 121553 2 R1 131567 cellular organisms 90.73 121548 6260 D 2 Bacteria 50.78 68027 651 P 1224 Pseudomonadota 25.21 33777 820 C 1236 Gammaproteobacteria 17.04 22825 0 O 135614 Lysobacterales 17.04 22823 4 F 32033 Lysobacteraceae 17.02 22806 2 G 338 Xanthomonas 17.02 22804 22804 S 29447 Xanthomonas albilineans 0.00 5 1 G 83614 Luteimonas 0.00 3 3 S 2565782 Luteimonas yindakuii 0.00 1 1 S 1176533 Luteimonas granuli 0.00 3 1 G 40323 Stenotrophomonas 0.00 1 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2682487 Stenotrophomonas sp. SXG-1 0.00 1 0 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 2 1 G 68 Lysobacter 0.00 1 1 S 435897 Lysobacter capsici 0.00 1 0 G 83618 Pseudoxanthomonas 0.00 1 0 S 415229 Pseudoxanthomonas spadix 0.00 1 1 S1 1045855 Pseudoxanthomonas spadix BD-a59 0.00 1 0 G 490567 Arenimonas 0.00 1 1 S 370777 Arenimonas daejeonensis 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.00 2 1 F 1775411 Rhodanobacteraceae 0.00 1 1 G 231454 Dyella 4.45 5965 380 O 91347 Enterobacterales 3.29 4405 477 F 543 Enterobacteriaceae 1.13 1520 18 G 561 Escherichia 1.11 1481 1387 S 562 Escherichia coli 0.01 19 19 S1 331112 Escherichia coli HS 0.01 16 16 S1 1322345 Escherichia coli ATCC 25922 0.01 14 14 S1 316435 Escherichia coli Nissle 1917 0.01 11 11 S1 2079157 Escherichia coli O2:H1 0.01 10 1 S1 83334 Escherichia coli O157:H7 0.00 5 5 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 3 3 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 1 S2 1328859 Escherichia coli O157:H7 str. SS17 0.01 8 8 S1 1446600 Escherichia coli O15:H18 0.01 7 7 S1 655817 Escherichia coli ABU 83972 0.00 6 6 S1 2874053 Escherichia coli O25:H1 0.00 1 1 S1 439855 Escherichia coli SMS-3-5 0.00 1 0 S1 1055537 Escherichia coli O121 0.00 1 1 S2 1055543 Escherichia coli O121 str. RM8352 0.00 1 1 S1 244320 Escherichia coli O55:H7 0.01 20 20 S 208962 Escherichia albertii 0.00 1 1 S 564 Escherichia fergusonii 0.55 738 714 F1 36866 unclassified Enterobacteriaceae 0.01 17 17 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 5 5 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 2 2 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.40 534 2 F1 2890311 Klebsiella/Raoultella group 0.40 530 10 G 570 Klebsiella 0.28 378 313 S 573 Klebsiella pneumoniae 0.04 54 54 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.01 11 11 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.07 99 99 S 548 Klebsiella aerogenes 0.02 23 6 S 1463165 Klebsiella quasipneumoniae 0.01 17 17 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 9 7 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S1 2590157 Klebsiella variicola subsp. variicola 0.01 8 8 S 1134687 Klebsiella michiganensis 0.00 2 0 G1 2608929 unclassified Klebsiella 0.00 2 2 S 2829835 Klebsiella sp. P1954 0.00 1 1 S 571 Klebsiella oxytoca 0.00 2 0 G 160674 Raoultella 0.00 1 1 S 575 Raoultella planticola 0.00 1 1 S 54291 Raoultella ornithinolytica 0.33 443 0 G 547 Enterobacter 0.33 436 1 G1 354276 Enterobacter cloacae complex 0.26 346 346 S 299767 Enterobacter ludwigii 0.05 69 68 S 158836 Enterobacter hormaechei 0.00 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.01 13 13 S 208224 Enterobacter kobei 0.00 4 2 S 550 Enterobacter cloacae 0.00 2 2 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 1 S 61645 Enterobacter asburiae 0.00 1 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.00 1 1 S 3029761 Enterobacter pasteurii 0.01 7 7 S 881260 Enterobacter bugandensis 0.31 422 18 G 590 Salmonella 0.30 401 38 S 28901 Salmonella enterica 0.27 363 13 S1 59201 Salmonella enterica subsp. enterica 0.06 78 78 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.06 77 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.04 52 52 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.02 25 25 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.05 71 71 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.04 57 57 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.02 25 5 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.01 13 13 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 7 7 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.01 10 5 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 3 3 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 2 2 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.01 7 7 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 6 6 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 4 4 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 3 3 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 3 0 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 3 3 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.00 2 2 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 2 2 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 1 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 3 0 S 54736 Salmonella bongori 0.00 3 3 S1 1299282 Salmonella bongori CFSAN000510 0.05 71 0 G 2815296 Jejubacter 0.05 71 71 S 2579935 Jejubacter calystegiae 0.04 48 0 G 1330547 Kosakonia 0.04 48 48 S 208223 Kosakonia cowanii 0.03 42 0 G 620 Shigella 0.03 42 42 S 623 Shigella flexneri 0.03 34 0 F1 191675 Enterobacteriaceae incertae sedis 0.03 34 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 18 0 F3 84564 ant endosymbionts 0.01 14 0 G 203804 Candidatus Blochmanniella 0.01 7 7 S 251538 Candidatus Blochmannia ocreatus 0.00 5 0 G1 711328 unclassified Candidatus Blochmanniella 0.00 4 4 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 2 0 S 251535 Candidatus Blochmanniella vafra 0.00 2 2 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.00 4 0 G 1699619 Candidatus Westeberhardia 0.00 4 4 S 1594731 Candidatus Westeberhardia cardiocondylae 0.01 7 0 F3 146507 aphid secondary symbionts 0.00 4 4 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 3 3 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 5 0 G 1302410 Candidatus Annandia 0.00 4 4 S 1302411 Candidatus Annandia adelgestsuga 0.00 1 1 S 1345117 Candidatus Annandia pinicola 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.00 1 0 G 1906661 Candidatus Gullanella 0.00 1 1 S 1070130 Candidatus Gullanella endobia 0.02 32 0 G 544 Citrobacter 0.01 20 0 G1 1344959 Citrobacter freundii complex 0.01 8 8 S 67828 Citrobacter gillenii 0.00 6 6 S 1639133 Citrobacter portucalensis 0.00 3 3 S 546 Citrobacter freundii 0.00 2 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 2 2 S 1686385 Citrobacter sp. BIDMC108 0.00 1 1 S 67827 Citrobacter werkmanii 0.00 6 0 S 35703 Citrobacter amalonaticus 0.00 6 6 S1 1261127 Citrobacter amalonaticus Y19 0.00 6 6 S 2971264 Citrobacter enshiensis 0.01 9 0 G 409304 Candidatus Ishikawella 0.01 9 0 S 168169 Candidatus Ishikawella capsulata 0.01 9 9 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 6 0 G 1649298 Siccibacter 0.00 6 6 S 1505757 Siccibacter colletis 0.00 6 0 G 1903434 Atlantibacter 0.00 6 6 S 565 Atlantibacter hermannii 0.00 4 4 G 401618 Candidatus Riesia 0.00 3 0 G 83654 Leclercia 0.00 3 0 G1 2627398 unclassified Leclercia 0.00 3 3 S 2282309 Leclercia sp. W17 0.00 3 0 G 1330545 Lelliottia 0.00 3 3 S 61646 Lelliottia amnigena 0.00 3 0 G 2303321 Superficieibacter 0.00 3 0 G1 2645744 unclassified Superficieibacter 0.00 3 3 S 3031919 Superficieibacter sp. HKU1 0.00 3 0 G 1048757 Candidatus Moranella 0.00 3 3 S 1048758 Candidatus Moranella endobia 0.00 3 0 G 1177214 Candidatus Profftia 0.00 2 0 G1 2735709 unclassified Candidatus Profftia 0.00 2 2 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.00 1 1 G 158483 Cedecea 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.00 1 0 G 2726810 Scandinavium 0.00 1 1 S 1851514 Scandinavium goeteborgense 0.00 1 0 G 413496 Cronobacter 0.00 1 1 S 413503 Cronobacter malonaticus 0.42 561 1 F 1903409 Erwiniaceae 0.34 454 0 G 551 Erwinia 0.33 447 447 S 1922217 Candidatus Erwinia haradaeae 0.00 6 6 S 65700 Erwinia tracheiphila 0.00 1 0 G1 2622719 unclassified Erwinia 0.00 1 1 S 215689 Erwinia sp. Ejp617 0.07 97 84 G 53335 Pantoea 0.00 6 0 G1 1654067 Pantoea agglomerans group 0.00 6 6 S 549 Pantoea agglomerans 0.00 3 3 S 66269 Pantoea stewartii 0.00 1 1 S 59814 Pantoea dispersa 0.00 1 1 S 470931 Pantoea anthophila 0.00 1 0 G1 2630326 unclassified Pantoea 0.00 1 1 S 3037258 Pantoea sp. X85 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.01 8 0 G 32199 Buchnera 0.01 8 6 S 9 Buchnera aphidicola 0.00 1 1 S1 3075418 Buchnera aphidicola (Neophyllaphis varicolor) 0.00 1 1 S1 1241868 Buchnera aphidicola (Mollitrichosiphum nigrofasciatum) 0.00 1 0 G 3026546 Duffyella 0.00 1 1 S 1619313 Duffyella gerundensis 0.22 292 0 F 2812006 Bruguierivoracaceae 0.22 292 0 G 84565 Sodalis 0.21 288 288 S 2697027 Sodalis ligni 0.00 3 0 S 1486991 Candidatus Sodalis pierantonius 0.00 3 3 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 1 S 1239307 Sodalis praecaptivus 0.14 183 0 F 1903411 Yersiniaceae 0.10 130 1 G 613 Serratia 0.07 98 97 S 138074 Serratia symbiotica 0.00 1 1 S1 3066236 Serratia symbiotica (Periphyllus acericola) 0.01 17 17 S 614 Serratia liquefaciens 0.00 6 6 S 61652 Serratia rubidaea 0.00 5 0 S 82996 Serratia plymuthica 0.00 5 5 S1 1006598 Serratia plymuthica RVH1 0.00 2 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 2 2 S 2785630 Serratia sp. CMO1 0.00 1 1 S 615 Serratia marcescens 0.03 41 0 G 629 Yersinia 0.03 35 0 G1 1649845 Yersinia pseudotuberculosis complex 0.03 35 2 S 632 Yersinia pestis 0.02 30 30 S1 748678 Yersinia pestis str. Pestoides B 0.00 3 3 S1 649716 Yersinia pestis Pestoides G 0.00 6 6 S 935293 Yersinia entomophaga 0.01 10 10 G 1927833 Candidatus Fukatsuia 0.00 2 0 G 1745211 Chania 0.00 2 0 S 1639108 Chania multitudinisentens 0.00 2 2 S1 1441930 Chania multitudinisentens RB-25 0.05 71 37 F 1903410 Pectobacteriaceae 0.01 16 0 G 122277 Pectobacterium 0.01 8 5 S 1905730 Pectobacterium parmentieri 0.00 3 3 S1 561231 Pectobacterium parmentieri WPP163 0.00 6 6 S 2488639 Pectobacterium versatile 0.00 2 2 S 180957 Pectobacterium brasiliense 0.01 15 2 G 204037 Dickeya 0.01 10 10 S 1089444 Dickeya solani 0.00 2 2 S 1778540 Dickeya fangzhongdai 0.00 1 0 S 204038 Dickeya dadantii 0.00 1 1 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 3 0 G 71655 Brenneria 0.00 2 2 S 55213 Brenneria rubrifaciens 0.00 1 1 S 1109412 Brenneria goodwinii 0.05 62 0 F 1903414 Morganellaceae 0.02 24 0 G 581 Morganella 0.02 24 24 S 582 Morganella morganii 0.01 18 1 G 637 Arsenophonus 0.01 7 7 S 638 Arsenophonus nasoniae 0.00 5 5 S 634113 Candidatus Arsenophonus lipoptenae 0.00 5 0 G1 2627083 unclassified Arsenophonus 0.00 3 3 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 2 2 S 3041619 Arsenophonus sp. aPb 0.01 7 2 G 583 Proteus 0.00 3 3 S 584 Proteus mirabilis 0.00 2 2 S 102862 Proteus penneri 0.01 7 0 G 586 Providencia 0.00 3 3 S 1715285 Candidatus Providencia siddallii 0.00 2 2 S 588 Providencia stuartii 0.00 2 0 S 516075 Providencia sneebia 0.00 2 2 S1 1141660 Providencia sneebia DSM 19967 0.00 3 0 G 626 Xenorhabdus 0.00 2 2 S 290110 Xenorhabdus budapestensis 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 3 2 G 29487 Photorhabdus 0.00 1 0 S 2218628 Photorhabdus laumondii 0.00 1 1 S1 141679 Photorhabdus laumondii subsp. laumondii 0.01 7 0 F 1903412 Hafniaceae 0.01 7 6 G 635 Edwardsiella 0.00 1 1 S 636 Edwardsiella tarda 0.00 3 0 F 1903416 Budviciaceae 0.00 3 0 G 2172100 Limnobaculum 0.00 3 3 S 2172103 Limnobaculum parvum 0.00 1 0 F 3120698 Gallaecimonadaceae 0.00 1 0 G 745410 Gallaecimonas 0.00 1 1 S 3029055 Gallaecimonas kandeliae 1.06 1426 0 O 72274 Pseudomonadales 1.06 1424 56 F 135621 Pseudomonadaceae 1.00 1345 979 G 286 Pseudomonas 0.10 132 19 G1 196821 unclassified Pseudomonas 0.02 21 21 S 2954094 Pseudomonas sp. FP453 0.01 16 16 S 2931382 Pseudomonas sp. PIA16 0.01 13 13 S 2762896 Pseudomonas sp. MPDS 0.01 12 12 S 2954092 Pseudomonas sp. FP2335 0.01 7 7 S 2705472 Pseudomonas sp. MTM4 0.01 7 7 S 2954088 Pseudomonas sp. FP2262 0.00 6 6 S 1649877 Pseudomonas sp. CCOS 191 0.00 3 3 S 3137451 Pseudomonas sp. G.S.17 0.00 3 3 S 2954080 Pseudomonas sp. FP1762 0.00 2 2 S 3020843 Pseudomonas sp. Q1-7 0.00 2 2 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 2 2 S 2954086 Pseudomonas sp. FP2196 0.00 2 2 S 3139142 Pseudomonas sp. RC10 0.00 2 2 S 2895472 Pseudomonas sp. B21-012 0.00 2 2 S 1344094 Pseudomonas sp. HN11 0.00 1 1 S 1357074 Pseudomonas sp. LS44 0.00 1 1 S 2895480 Pseudomonas sp. B21-028 0.00 1 1 S 1500686 Pseudomonas sp. Os17 0.00 1 1 S 75692 Pseudomonas sp. 273 0.00 1 1 S 3048583 Pseudomonas sp. 10S4 0.00 1 1 S 2944392 Pseudomonas sp. BYT-5 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 2025658 Pseudomonas sp. NS1(2017) 0.00 1 1 S 2954101 Pseudomonas sp. FP830 0.00 1 1 S 2972478 Pseudomonas sp. LS1212 0.00 1 1 S 2498848 Pseudomonas sp. MPC6 0.00 1 1 S 2974552 Pseudomonas sp. GCEP-101 0.00 1 1 S 2895471 Pseudomonas sp. B21-010 0.04 52 1 G1 136841 Pseudomonas aeruginosa group 0.04 51 45 S 287 Pseudomonas aeruginosa 0.00 6 6 S1 381754 Pseudomonas aeruginosa PA7 0.03 45 45 S 2738125 Pseudomonas hefeiensis 0.03 42 2 G1 136845 Pseudomonas putida group 0.02 23 23 S 78327 Pseudomonas mosselii 0.01 17 16 S 303 Pseudomonas putida 0.00 1 1 S1 1081940 Pseudomonas putida B6-2 0.02 28 0 G1 136843 Pseudomonas fluorescens group 0.01 15 1 S 47883 Pseudomonas synxantha 0.01 14 14 S1 96901 Pseudomonas synxantha BG33R 0.01 8 8 S 47878 Pseudomonas azotoformans 0.00 2 2 S 76758 Pseudomonas orientalis 0.00 1 1 S 200452 Pseudomonas congelans 0.00 1 1 S 200450 Pseudomonas trivialis 0.00 1 1 S 183795 Pseudomonas mediterranea 0.01 12 12 S 46677 Pseudomonas agarici 0.01 9 0 G1 136849 Pseudomonas syringae group 0.01 9 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.01 9 1 S 317 Pseudomonas syringae 0.00 5 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 5 5 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 3 3 S1 1357285 Pseudomonas syringae CC457 0.01 7 7 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 6 6 S 515393 Pseudomonas yamanorum 0.00 4 0 G1 136842 Pseudomonas chlororaphis group 0.00 4 4 S 380021 Pseudomonas protegens 0.00 3 3 S 437900 Pseudomonas marincola 0.00 3 3 S 244566 Pseudomonas lurida 0.00 2 2 S 364197 Pseudomonas pohangensis 0.00 2 2 S 158627 Pseudomonas graminis 0.00 2 2 S 2853159 Pseudomonas pergaminensis 0.00 2 2 S 485880 Pseudomonas kurunegalensis 0.00 2 2 S 930166 Pseudomonas brassicacearum 0.00 2 2 S 1198456 Pseudomonas guguanensis 0.00 2 2 S 2599595 Pseudomonas eucalypticola 0.00 2 2 S 65741 Pseudomonas knackmussii 0.00 1 1 S 157783 Pseudomonas cremoricolorata 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.00 1 1 S 2842349 Pseudomonas asgharzadehiana 0.00 1 1 S 702115 Pseudomonas arsenicoxydans 0.00 1 1 S 53407 Pseudomonas asplenii 0.00 1 1 S 2894079 Pseudomonas oryziphila 0.00 1 1 S 104087 Pseudomonas frederiksbergensis 0.01 13 0 F1 351 Azotobacter group 0.01 13 13 G 352 Azotobacter 0.00 3 0 G 1654787 Thiopseudomonas 0.00 3 3 S 1697053 Thiopseudomonas alkaliphila 0.00 3 0 G 2901164 Stutzerimonas 0.00 2 0 G1 136846 Stutzerimonas stutzeri group 0.00 1 1 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 1 1 S 1176257 Stutzerimonas zhaodongensis 0.00 3 0 G 2901189 Halopseudomonas 0.00 3 3 S 797277 Halopseudomonas litoralis 0.00 1 0 G 2758906 Entomomonas 0.00 1 1 S 2785331 Entomomonas asaccharolytica 0.00 1 0 F 3085095 Pseudohongiellaceae 0.00 1 0 G 1524249 Pseudohongiella 0.00 1 1 S 1249552 Pseudohongiella spirulinae 0.00 1 0 F 3085096 Ketobacteraceae 0.00 1 0 G 2025617 Ketobacter 0.00 1 1 S 1917421 Ketobacter alkanivorans 0.43 579 0 O 2887326 Moraxellales 0.43 579 4 F 468 Moraxellaceae 0.39 527 243 G 469 Acinetobacter 0.10 137 3 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.08 111 106 S 470 Acinetobacter baumannii 0.00 5 5 S1 1279013 Acinetobacter baumannii PR07 0.02 22 20 S 48296 Acinetobacter pittii 0.00 2 2 S1 871585 Acinetobacter pittii PHEA-2 0.00 1 1 S 471 Acinetobacter calcoaceticus 0.04 59 59 S 487316 Acinetobacter soli 0.02 23 23 S 108981 Acinetobacter schindleri 0.01 18 18 S 202956 Acinetobacter towneri 0.01 16 16 S 756892 Acinetobacter indicus 0.01 13 13 S 40214 Acinetobacter johnsonii 0.01 10 2 G1 196816 unclassified Acinetobacter 0.00 1 1 S 3045147 Acinetobacter sp. KCTC 92772 0.00 1 1 S 2714110 Acinetobacter sp. Marseille-Q1620 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.00 1 1 S 2919376 Acinetobacter sp. AOR07_HL 0.00 1 1 S 1827285 Acinetobacter sp. MYb10 0.00 1 1 S 1879049 Acinetobacter sp. WCHAc010034 0.00 1 1 S 2563897 Acinetobacter sp. 10FS3-1 0.00 1 1 S 2908637 Acinetobacter sp. SCLZS86 0.00 2 0 S 52133 Acinetobacter venetianus 0.00 2 2 S1 1197884 Acinetobacter venetianus VE-C3 0.00 1 1 S 2662362 Acinetobacter wanghuae 0.00 1 1 S 2006115 Acinetobacter piscicola 0.00 1 0 S 1148157 Acinetobacter oleivorans 0.00 1 1 S1 436717 Acinetobacter oleivorans DR1 0.00 1 1 S 106648 Acinetobacter bereziniae 0.00 1 1 S 70346 Acinetobacter variabilis 0.00 1 1 S 40215 Acinetobacter junii 0.03 44 36 G 475 Moraxella 0.01 8 8 S 2904120 Moraxella nasibovis 0.00 3 1 G 497 Psychrobacter 0.00 2 2 G1 196806 unclassified Psychrobacter 0.00 1 0 G 2824158 Aquirhabdus 0.00 1 1 S 2283318 Aquirhabdus parva 0.32 433 1 O 135622 Alteromonadales 0.29 391 0 F 267888 Pseudoalteromonadaceae 0.29 383 0 G 2834759 Flocculibacter 0.29 383 383 S 2744479 Flocculibacter collagenilyticus 0.01 8 0 G 53246 Pseudoalteromonas 0.01 8 0 G1 194690 unclassified Pseudoalteromonas 0.00 4 4 S 2785910 Pseudoalteromonas sp. A41-2 0.00 4 4 S 649161 Pseudoalteromonas sp. 3J6 0.01 19 1 F 72275 Alteromonadaceae 0.01 15 0 F1 2903219 Alteromonas/Salinimonas group 0.01 15 0 G 226 Alteromonas 0.01 15 0 G1 2614992 unclassified Alteromonas 0.01 15 15 S 2267264 Alteromonas sp. RKMC-009 0.00 2 2 G 1858563 Alkalimarinus 0.00 1 0 G 1172191 Catenovulum 0.00 1 1 S 1740262 Catenovulum sediminis 0.01 19 0 F 267890 Shewanellaceae 0.01 19 3 G 22 Shewanella 0.01 9 8 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 5 5 S 62322 Shewanella baltica 0.00 2 2 S 332186 Shewanella xiamenensis 0.00 2 0 F 267892 Ferrimonadaceae 0.00 2 1 G 44011 Ferrimonas 0.00 1 1 S 2724191 Ferrimonas lipolytica 0.00 1 0 F 267889 Colwelliaceae 0.00 1 0 G 1518149 Thalassotalea 0.00 1 1 S 1759089 Thalassotalea sediminis 0.29 388 0 O 135624 Aeromonadales 0.29 388 17 F 84642 Aeromonadaceae 0.24 321 202 G 642 Aeromonas 0.06 86 86 S 654 Aeromonas veronii 0.01 11 11 S 648 Aeromonas caviae 0.01 8 7 S 645 Aeromonas salmonicida 0.00 1 1 S1 197700 Aeromonas salmonicida subsp. masoucida 0.00 5 5 S 196024 Aeromonas dhakensis 0.00 3 0 G1 257493 unclassified Aeromonas 0.00 2 2 S 2920537 Aeromonas sp. 19NY04SH05-1 0.00 1 1 S 2778058 Aeromonas sp. FDAARGOS 1409 0.00 2 2 S 652 Aeromonas schubertii 0.00 1 1 S 650 Aeromonas jandaei 0.00 1 0 S 651 Aeromonas media 0.00 1 1 S1 1208104 Aeromonas media WS 0.00 1 1 S 644 Aeromonas hydrophila 0.00 1 1 S 73010 Aeromonas encheleia 0.02 33 0 G 225143 Oceanisphaera 0.02 33 33 S 1903694 Oceanisphaera avium 0.01 13 0 G 43947 Tolumonas 0.01 7 7 S 43948 Tolumonas auensis 0.00 6 0 G1 263764 environmental samples 0.00 6 6 S 263765 uncultured Tolumonas sp. 0.00 2 0 G 347533 Zobellella 0.00 2 2 S 347534 Zobellella denitrificans 0.00 2 0 G 2802288 Dongshaea 0.00 2 2 S 2047966 Dongshaea marina 0.22 301 0 O 135623 Vibrionales 0.22 301 28 F 641 Vibrionaceae 0.18 242 100 G 662 Vibrio 0.05 69 0 S 52443 Vibrio tapetis 0.05 69 69 S1 1671868 Vibrio tapetis subsp. tapetis 0.02 30 30 S 666 Vibrio cholerae 0.01 11 2 G1 2614977 unclassified Vibrio 0.01 7 7 S 2661921 Vibrio sp. THAF191c 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.01 9 9 S 2572923 Vibrio taketomensis 0.01 7 0 G1 717610 Vibrio harveyi group 0.01 7 7 S 669 Vibrio harveyi 0.01 7 7 S 55601 Vibrio anguillarum 0.00 5 0 S 672 Vibrio vulnificus 0.00 5 5 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 0 G1 1891919 Vibrio oreintalis group 0.00 1 1 S 29498 Vibrio tubiashii 0.00 1 0 G1 87806 environmental samples 0.00 1 1 S 114054 uncultured Vibrio sp. 0.00 1 1 S 28173 Vibrio nigripulchritudo 0.00 1 1 S 674 Vibrio mimicus 0.02 29 5 G 657 Photobacterium 0.02 24 13 S 553611 Photobacterium leiognathi 0.01 11 11 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 2 0 G 511678 Aliivibrio 0.00 2 0 S 40269 Aliivibrio salmonicida 0.00 2 2 S1 316275 Aliivibrio salmonicida LFI1238 0.22 300 0 O 135625 Pasteurellales 0.22 300 4 F 712 Pasteurellaceae 0.19 258 63 G 724 Haemophilus 0.13 170 170 S 729 Haemophilus parainfluenzae 0.02 21 21 S 727 Haemophilus influenzae 0.00 4 4 S 735 Haemophilus parahaemolyticus 0.01 15 14 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.01 10 2 G 713 Actinobacillus 0.00 4 0 S 718 Actinobacillus equuli 0.00 4 4 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 2 S 157339 Actinobacillus arthritidis 0.00 1 0 S 715 Actinobacillus pleuropneumoniae 0.00 1 0 S1 754344 Actinobacillus pleuropneumoniae serovar 6 0.00 1 1 S2 754256 Actinobacillus pleuropneumoniae serovar 6 str. Femo 0.00 1 0 S 67854 Actinobacillus succinogenes 0.00 1 1 S1 339671 Actinobacillus succinogenes 130Z 0.00 5 0 G 75984 Mannheimia 0.00 4 2 S 85404 Mannheimia varigena 0.00 2 2 S1 1433287 Mannheimia varigena USDA-ARS-USMARC-1296 0.00 1 1 S 85402 Mannheimia granulomatis 0.00 2 0 G 745 Pasteurella 0.00 2 2 S 747 Pasteurella multocida 0.00 2 2 G 292486 Avibacterium 0.00 1 0 G 214906 Histophilus 0.00 1 1 S 731 Histophilus somni 0.00 1 0 G 1960084 Rodentibacter 0.00 1 1 S 2778911 Rodentibacter haemolyticus 0.00 1 0 G 2094023 Glaesserella 0.00 1 0 G1 2629322 unclassified Glaesserella 0.00 1 1 S 2030797 Glaesserella sp. 15-184 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.15 206 0 C1 118884 Gammaproteobacteria incertae sedis 0.13 176 0 C2 32036 sulfur-oxidizing symbionts 0.13 174 0 G 2686004 Candidatus Vondammii 0.13 174 0 G1 2687300 unclassified Candidatus Vondammii 0.13 174 174 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 1 0 S 386487 Candidatus Ruthturnera calyptogenae 0.00 1 1 S1 413404 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 0.00 1 1 S 2738852 Candidatus Ruthia endofausta 0.02 28 0 G 1076625 Candidatus Steffania 0.02 28 28 S 1076626 Candidatus Steffania adelgidicola 0.00 2 0 G 198346 Candidatus Palibaumannia 0.00 2 2 S 186490 Candidatus Palibaumannia cicadellinicola 0.12 159 0 O 135615 Cardiobacteriales 0.12 155 0 F 868 Cardiobacteriaceae 0.09 116 0 G 2717 Cardiobacterium 0.05 68 68 S 2718 Cardiobacterium hominis 0.04 48 0 G1 2648856 unclassified Cardiobacterium 0.04 48 48 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.03 37 0 G 13275 Suttonella 0.03 37 0 G1 2908647 unclassified Suttonella 0.03 37 37 S 2908648 Suttonella sp. R2A3 0.00 2 0 G 869 Dichelobacter 0.00 2 2 S 870 Dichelobacter nodosus 0.00 4 0 F 3018589 Ignatzschineriaceae 0.00 4 0 G 582472 Wohlfahrtiimonas 0.00 4 4 S 400946 Wohlfahrtiimonas chitiniclastica 0.07 88 0 O 1240482 Orbales 0.07 88 0 F 1240483 Orbaceae 0.07 88 0 G 2894762 Zophobihabitans 0.07 88 88 S 1635327 Zophobihabitans entericus 0.05 63 1 O 135613 Chromatiales 0.04 57 2 F 1046 Chromatiaceae 0.02 30 0 G 67575 Rheinheimera 0.02 30 0 G1 115860 unclassified Rheinheimera 0.02 30 30 S 1763998 Rheinheimera sp. F8 0.00 6 6 G 1056 Thiocapsa 0.00 6 0 G 85072 Allochromatium 0.00 6 6 S 553982 Allochromatium tepidum 0.00 6 0 G 156885 Thioflavicoccus 0.00 6 0 S 80679 Thioflavicoccus mobilis 0.00 6 6 S1 765912 Thioflavicoccus mobilis 8321 0.00 6 0 G 2828366 Caldichromatium 0.00 6 6 S 2699430 Caldichromatium japonicum 0.00 1 0 G 85073 Thermochromatium 0.00 1 0 S 1050 Thermochromatium tepidum 0.00 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 4 0 F 72276 Ectothiorhodospiraceae 0.00 1 1 G 1051 Ectothiorhodospira 0.00 1 0 G 85108 Halorhodospira 0.00 1 0 S 1053 Halorhodospira halophila 0.00 1 1 S1 349124 Halorhodospira halophila SL1 0.00 1 0 G 106633 Thioalkalivibrio 0.00 1 1 S 106634 Thioalkalivibrio versutus 0.00 1 0 G 1335745 Spiribacter 0.00 1 1 S 2182432 Spiribacter halobius 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 1913444 Candidatus Thiodiazotropha 0.00 1 1 S 3065865 Candidatus Thiodiazotropha sp. CDECU1 0.04 51 0 O 135619 Oceanospirillales 0.02 27 0 F 135620 Oceanospirillaceae 0.01 15 0 G 267849 Nitrincola 0.01 15 15 S 2614693 Nitrincola iocasae 0.00 6 1 G 28253 Marinomonas 0.00 4 4 S 2773454 Marinomonas algicola 0.00 1 1 S 119864 Marinomonas mediterranea 0.00 3 0 G 459520 Neptuniibacter 0.00 3 3 S 651666 Neptuniibacter halophilus 0.00 2 0 G 48075 Marinobacterium 0.00 2 0 G1 2644139 unclassified Marinobacterium 0.00 2 2 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 1 G 515417 Amphritea 0.01 11 0 F 28256 Halomonadaceae 0.01 7 0 G 2745 Halomonas 0.00 6 6 S 3031727 Halomonas piscis 0.00 1 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2773308 Halomonas sp. YLGW01 0.00 3 0 F1 114403 Zymobacter group 0.00 2 0 G 235572 Candidatus Portiera 0.00 2 2 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 504090 Kushneria 0.00 1 1 S 657387 Kushneria phosphatilytica 0.01 10 0 F 2823145 Pleioneaceae 0.01 10 0 G 1502941 Pleionea 0.01 10 10 S 3070815 Pleionea litopenaei 0.00 1 0 F 191033 Oleiphilaceae 0.00 1 0 G 141450 Oleiphilus 0.00 1 1 S 141451 Oleiphilus messinensis 0.00 1 0 F 224379 Hahellaceae 0.00 1 1 G 158481 Hahella 0.00 1 0 F 255527 Saccharospirillaceae 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.04 47 0 O 135618 Methylococcales 0.04 47 3 F 403 Methylococcaceae 0.03 37 0 G 39773 Methylomicrobium 0.03 37 0 S 39775 Methylomicrobium album 0.03 37 37 S1 686340 Methylomicrobium album BG8 0.00 3 0 G 1295378 Methylogaea 0.00 3 3 S 1295382 Methylogaea oryzae 0.00 2 0 G 1808977 Candidatus Methylospira 0.00 2 2 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 G 413 Methylococcus 0.00 1 1 G1 2618889 unclassified Methylococcus 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.03 39 0 O 1775403 Nevskiales 0.03 39 37 F 568386 Nevskiaceae 0.00 1 0 G 413435 Solimonas 0.00 1 0 G1 2637139 unclassified Solimonas 0.00 1 1 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 G 1861863 Sinimarinibacterium 0.00 1 0 G1 2621506 unclassified Sinimarinibacterium 0.00 1 1 S 2698684 Sinimarinibacterium sp. NLF-5-8 0.02 28 2 O 72273 Thiotrichales 0.01 12 0 F 135617 Thiotrichaceae 0.00 6 0 G 1021 Beggiatoa 0.00 6 6 S 288004 Beggiatoa leptomitoformis 0.00 6 6 G 1030 Thiothrix 0.01 8 0 F 2056687 Fastidiosibacteraceae 0.01 8 0 G 2056696 Cysteiniphilum 0.01 8 0 G1 2610889 unclassified Cysteiniphilum 0.01 8 8 S 2975055 Cysteiniphilum sp. QT6929 0.00 6 0 F 135616 Piscirickettsiaceae 0.00 3 3 G 34067 Cycloclasticus 0.00 2 1 G 933 Thiomicrospira 0.00 1 0 G1 2643099 unclassified Thiomicrospira 0.00 1 1 S 3035472 Thiomicrospira sp. R3 0.00 1 0 G 28884 Hydrogenovibrio 0.00 1 1 S 28885 Hydrogenovibrio marinus 0.01 20 0 O 118969 Legionellales 0.01 15 6 F 118968 Coxiellaceae 0.00 5 0 G 254245 Aquicella 0.00 4 4 S 254247 Aquicella siphonis 0.00 1 1 S 254246 Aquicella lusitana 0.00 2 0 G 776 Coxiella 0.00 1 1 S 777 Coxiella burnetii 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 2 2 G 59195 Rickettsiella 0.00 5 0 F 444 Legionellaceae 0.00 5 2 G 445 Legionella 0.00 2 0 S 446 Legionella pneumophila 0.00 2 2 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 1 1 S 450 Legionella longbeachae 0.01 14 0 O 2975284 Candidatus Comchoanobacterales 0.01 14 0 F 2975285 Candidatus Comchoanobacteraceae 0.01 14 0 G 2975286 Candidatus Comchoanobacter 0.01 14 14 S 2919598 Candidatus Comchoanobacter bicostacola 0.01 9 0 O 3085109 Thiohalobacterales 0.01 9 0 F 3085110 Thiohalobacteraceae 0.01 9 0 G 1273155 Thiohalobacter 0.01 9 0 G1 2631224 unclassified Thiohalobacter 0.01 9 9 S 3057176 Thiohalobacter sp. IOR34 0.01 7 0 O 1706369 Cellvibrionales 0.00 4 0 F 1706371 Cellvibrionaceae 0.00 4 2 G 2425 Teredinibacter 0.00 2 2 S 2731755 Teredinibacter haidensis 0.00 2 0 F 1706373 Microbulbiferaceae 0.00 2 0 G 48073 Microbulbifer 0.00 2 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 2944933 Microbulbifer sp. MI-G 0.00 1 1 S 3145235 Microbulbifer sp. SAOS-129_SWC 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 6 0 O 3084968 Thiohalomonadales 0.00 6 0 F 3084969 Thiohalomonadaceae 0.00 6 0 G 2034504 Sulfurivermis 0.00 6 6 S 1972068 Sulfurivermis fontis 0.00 2 0 O 2887327 Kangiellales 0.00 2 0 F 1920240 Kangiellaceae 0.00 2 1 G 261963 Kangiella 0.00 1 1 S 1144748 Kangiella sediminilitoris 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 650377 endosymbiont of Euscepes postfasciatus 21.94 29390 185 C 28211 Alphaproteobacteria 18.90 25322 70 O 204441 Rhodospirillales 18.69 25037 0 F 2844601 Stellaceae 18.69 25037 0 G 93 Stella 18.69 25037 25037 S 94 Stella humosa 0.14 186 7 F 433 Acetobacteraceae 0.10 129 0 G 512381 Acidisoma 0.10 129 0 G1 2634065 unclassified Acidisoma 0.10 129 129 S 3040935 Acidisoma sp. PAMC 29798 0.02 28 22 G 125216 Roseomonas 0.00 2 2 S 207340 Roseomonas mucosa 0.00 2 0 G1 2617492 unclassified Roseomonas 0.00 2 2 S 2897332 Roseomonas sp. OT10 0.00 2 2 S 2768161 Roseomonas marmotae 0.01 11 0 G 2870717 Pseudoroseomonas 0.01 11 11 S 204525 Pseudoroseomonas cervicalis 0.00 5 0 G 504465 Rhodovastum 0.00 5 5 S 504468 Rhodovastum atsumiense 0.00 2 0 G 434 Acetobacter 0.00 1 1 S 431306 Acetobacter ghanensis 0.00 1 1 S 2592655 Acetobacter vaccinii 0.00 1 1 G 522 Acidiphilium 0.00 1 0 G 3027666 Aristophania 0.00 1 1 S 2697033 Aristophania vespae 0.00 1 0 G 1706033 Sediminicoccus 0.00 1 1 S 1225128 Sediminicoccus rosea 0.00 1 0 G 2603324 Acidibrevibacterium 0.00 1 1 S 1969806 Acidibrevibacterium fodinaquatile 0.01 19 0 F 41295 Rhodospirillaceae 0.01 18 0 G 111830 Defluviicoccus 0.01 18 18 S 111831 Defluviicoccus vanus 0.00 1 0 G 1263978 Candidatus Endolissoclinum 0.00 1 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 4 0 F 2690195 Elioraeaceae 0.00 4 0 G 457933 Elioraea 0.00 4 4 S 2843330 Elioraea tepida 0.00 4 0 F 3031144 Dongiaceae 0.00 4 2 G 2705399 Hypericibacter 0.00 2 2 S 2602016 Hypericibacter adhaerens 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 1064539 Azospirillum baldaniorum 0.00 1 0 F 2844864 Thalassobaculaceae 0.00 1 0 G 390876 Nisaea 0.00 1 1 S 1862145 Nisaea acidiphila 2.03 2715 25 O 356 Hyphomicrobiales 1.41 1894 272 F 119045 Methylobacteriaceae 1.12 1499 1182 G 407 Methylobacterium 0.12 156 0 S 31998 Methylobacterium radiotolerans 0.12 156 156 S1 426355 Methylobacterium radiotolerans JCM 2831 0.04 60 60 S 570505 Methylobacterium bullatum 0.04 48 19 G1 2615210 unclassified Methylobacterium 0.01 18 18 S 2984843 Methylobacterium sp. FF17 0.01 7 7 S 426117 Methylobacterium sp. 4-46 0.00 4 4 S 2202826 Methylobacterium sp. 17Sr1-1 0.01 16 16 S 1775910 Methylobacterium indicum 0.01 13 13 S 270351 Methylobacterium aquaticum 0.01 10 10 S 334852 Methylobacterium oryzae 0.01 7 7 S 410 Methylobacterium organophilum 0.00 3 3 S 2051553 Methylobacterium currus 0.00 3 3 S 2202827 Methylobacterium terrae 0.00 1 1 S 269660 Methylobacterium brachiatum 0.09 123 103 G 186650 Microvirga 0.01 20 20 S 1882682 Microvirga ossetica 0.49 652 3 F 82115 Rhizobiaceae 0.48 640 619 F1 227290 Rhizobium/Agrobacterium group 0.01 17 3 G 379 Rhizobium 0.01 13 0 S 384 Rhizobium leguminosarum 0.01 13 13 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 1 G1 2613769 unclassified Rhizobium 0.00 2 0 G 357 Agrobacterium 0.00 1 1 S 373 Agrobacterium vitis 0.00 1 1 S 648995 Agrobacterium pusense 0.00 2 0 G 1612611 Pararhizobium 0.00 2 0 G1 2643050 unclassified Pararhizobium 0.00 1 1 S 2986923 Pararhizobium sp. BT-229 0.00 1 1 S 3067904 Pararhizobium sp. IMCC3301 0.00 5 3 G 34019 Liberibacter 0.00 2 0 S 556287 Candidatus Liberibacter solanacearum 0.00 2 2 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 4 0 F1 227292 Sinorhizobium/Ensifer group 0.00 4 0 G 28105 Sinorhizobium 0.00 4 1 S 382 Sinorhizobium meliloti 0.00 3 3 S1 1041157 Sinorhizobium meliloti WSM1022 0.02 31 0 F 118882 Brucellaceae 0.02 29 29 G 354349 Pseudochrobactrum 0.00 2 0 F1 2826938 Brucella/Ochrobactrum group 0.00 2 0 G 234 Brucella 0.00 1 0 S 235 Brucella abortus 0.00 1 0 S1 1567505 Brucella abortus bv. 9 0.00 1 1 S2 520455 Brucella abortus bv. 9 str. C68 0.00 1 0 S 29459 Brucella melitensis 0.00 1 0 S1 645169 Brucella melitensis bv. 2 0.00 1 1 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.02 30 0 O1 119042 Hyphomicrobiales incertae sedis 0.02 26 0 G 212791 Enhydrobacter 0.02 26 0 G1 2632691 unclassified Enhydrobacter 0.02 26 26 S 1894999 Enhydrobacter sp. 0.00 4 0 G 169055 Nordella 0.00 4 0 G1 2623691 unclassified Nordella 0.00 4 4 S 2712222 Nordella sp. HKS 07 0.02 29 1 F 69277 Phyllobacteriaceae 0.02 28 0 G 68287 Mesorhizobium 0.02 25 25 S 2725666 Mesorhizobium terrae 0.00 2 0 G1 325217 unclassified Mesorhizobium 0.00 2 2 S 2493668 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 0.00 1 1 S 593909 Mesorhizobium opportunistum 0.01 19 1 F 2831106 Devosiaceae 0.01 16 1 G 46913 Devosia 0.01 15 15 S 2774137 Devosia rhizoryzae 0.00 2 0 G 3064792 Mariluticola 0.00 2 2 S 2909283 Mariluticola halotolerans 0.01 15 2 F 41294 Nitrobacteraceae 0.01 13 2 G 374 Bradyrhizobium 0.00 5 5 S 1355477 Bradyrhizobium diazoefficiens 0.00 5 0 G1 2631580 unclassified Bradyrhizobium 0.00 5 5 S 2954771 Bradyrhizobium sp. Ash2021 0.00 1 1 S 1325095 Bradyrhizobium guangzhouense 0.00 6 0 F 45401 Hyphomicrobiaceae 0.00 5 5 G 81 Hyphomicrobium 0.00 1 0 G 1068 Rhodomicrobium 0.00 1 1 S 2498452 Rhodomicrobium lacus 0.00 3 0 F 2831100 Boseaceae 0.00 3 2 G 85413 Bosea 0.00 1 0 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.00 1 1 S 2015316 Bosea sp. AS-1 0.00 3 0 F 2813035 Parvibaculaceae 0.00 3 0 G 256616 Parvibaculum 0.00 3 0 S 256618 Parvibaculum lavamentivorans 0.00 3 3 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 2 0 F 255475 Aurantimonadaceae 0.00 2 2 G 414371 Aureimonas 0.00 2 0 F 3142785 Terrirubraceae 0.00 2 0 G 3142786 Terrirubrum 0.00 2 2 S 2895980 Terrarubrum flagellatum 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.00 1 0 F 2843308 Pleomorphomonadaceae 0.00 1 0 G 261933 Pleomorphomonas 0.00 1 0 G1 442120 environmental samples 0.00 1 1 S 442121 uncultured Pleomorphomonas sp. 0.00 1 0 F 2685818 Amorphaceae 0.00 1 0 G 1904377 Acuticoccus 0.00 1 1 G1 2631034 unclassified Acuticoccus 0.00 1 0 F 45404 Beijerinckiaceae 0.00 1 0 G 1156568 Methylovirgula 0.00 1 0 G1 2640612 unclassified Methylovirgula 0.00 1 1 S 2293567 Methylovirgula sp. 4M-Z18 0.41 548 14 O 204457 Sphingomonadales 0.37 499 21 F 41297 Sphingomonadaceae 0.29 383 231 G 13687 Sphingomonas 0.09 123 6 G1 196159 unclassified Sphingomonas 0.08 113 113 S 3062169 Sphingomonas sp. C3-2 0.00 2 2 S 2937788 Sphingomonas sp. SUN019 0.00 1 1 S 3114300 Sphingomonas sp. M1-B02 0.00 1 1 S 2937787 Sphingomonas sp. SUN039 0.01 10 10 S 298708 Sphingomonas kaistensis 0.00 5 5 S 13689 Sphingomonas paucimobilis 0.00 4 4 S 1541170 Sphingomonas morindae 0.00 3 3 S 2698679 Sphingomonas changnyeongensis 0.00 2 2 S 2681549 Sphingomonas profundi 0.00 2 2 S 2698828 Sphingomonas lacunae 0.00 2 2 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 S 1176646 Sphingomonas daechungensis 0.05 69 68 G 165695 Sphingobium 0.00 1 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 1144307 Sphingobium sp. AP49 0.01 15 14 G 165696 Novosphingobium 0.00 1 1 G1 2644732 unclassified Novosphingobium 0.00 6 1 G 165697 Sphingopyxis 0.00 5 5 G1 2614943 unclassified Sphingopyxis 0.00 2 0 G 1763827 Hankyongella 0.00 2 2 S 1763828 Hankyongella ginsenosidimutans 0.00 1 0 G 1234545 Parasphingopyxis 0.00 1 1 S 2026624 Parasphingopyxis algicola 0.00 1 0 G 1434046 Sphingorhabdus 0.00 1 1 S 1913578 Sphingorhabdus lutea 0.00 1 0 G 1649486 Rhizorhabdus 0.00 1 1 S 160791 Rhizorhabdus wittichii 0.02 26 0 F 335929 Erythrobacteraceae 0.01 15 15 G 2800681 Aurantiacibacter 0.00 4 0 G 1295327 Croceicoccus 0.00 4 4 S 1348774 Croceicoccus naphthovorans 0.00 2 0 G 2676755 Croceibacterium 0.00 2 0 G1 2676756 unclassified Croceibacterium 0.00 2 2 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 2 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 2 0 G 1111 Porphyrobacter 0.00 2 0 G1 2683265 unclassified Porphyrobacter 0.00 2 2 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 1 0 G 361177 Altererythrobacter 0.00 1 1 S 361183 Altererythrobacter epoxidivorans 0.00 1 0 G 1855416 Qipengyuania 0.00 1 1 S 225971 Qipengyuania citrea 0.00 1 0 G 2800686 Tsuneonella 0.00 1 0 G1 2800703 unclassified Tsuneonella 0.00 1 1 S 3042152 Tsuneonella sp. CC-YZS046 0.01 9 0 F 2820280 Sphingosinicellaceae 0.01 9 9 G 1508451 Polymorphobacter 0.24 320 0 O 204458 Caulobacterales 0.24 320 0 F 76892 Caulobacteraceae 0.24 318 5 G 41275 Brevundimonas 0.23 313 0 G1 2622653 unclassified Brevundimonas 0.23 313 313 S 2560058 Brevundimonas sp. Bb-A 0.00 1 0 G 20 Phenylobacterium 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 0 G 76890 Asticcacaulis 0.00 1 0 G1 2628350 unclassified Asticcacaulis 0.00 1 1 S 3157666 Asticcacaulis sp. MM231 0.18 244 23 O 204455 Rhodobacterales 0.16 216 42 F 31989 Paracoccaceae 0.12 156 143 G 265 Paracoccus 0.01 7 7 S 2259340 Paracoccus suum 0.00 4 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 2 2 S 2760307 Paracoccus sp. MC1862 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.00 1 1 S 147645 Paracoccus yeei 0.00 1 1 S 659350 Paracoccus stylophorae 0.00 6 0 G 2831955 Pikeienuella 0.00 6 6 S 2748098 Pikeienuella piscinae 0.00 3 0 G 285107 Thioclava 0.00 3 3 S 1549850 Thioclava electrotropha 0.00 2 0 G 2816884 Qingshengfaniella 0.00 2 2 S 2599296 Qingshengfaniella alkalisoli 0.00 2 0 G 1434002 Falsirhodobacter 0.00 2 2 S 2692330 Falsirhodobacter algicola 0.00 2 0 G 2946607 Neotabrizicola 0.00 2 2 S 2807096 Neotabrizicola shimadae 0.00 1 0 G 1060 Rhodobacter 0.00 1 1 S 1850250 Rhodobacter xanthinilyticus 0.00 1 0 G 2818469 Fuscovulum 0.00 1 1 S 1075 Fuscovulum blasticum 0.00 1 0 G 366614 Haematobacter 0.00 1 1 S 195105 Haematobacter massiliensis 0.00 5 1 F 2854170 Roseobacteraceae 0.00 2 1 G 74030 Roseovarius 0.00 1 1 S 74031 Roseovarius tolerans 0.00 1 0 G 60136 Sulfitobacter 0.00 1 1 S 83219 Sulfitobacter mediterraneus 0.00 1 0 G 266808 Thalassobacter 0.00 1 1 S 266809 Thalassobacter stenotrophicus 0.02 31 2 O 766 Rickettsiales 0.01 17 0 F 775 Rickettsiaceae 0.01 16 0 F1 33988 Rickettsieae 0.01 9 0 G 780 Rickettsia 0.01 8 0 G1 114277 spotted fever group 0.01 7 0 S 781 Rickettsia conorii 0.01 7 7 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 1 S 35790 Rickettsia japonica 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.01 7 0 G 2601645 Candidatus Sneabacter 0.01 7 7 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 G 1742636 Candidatus Megaera 0.00 1 1 S 988779 Candidatus Megaera polyxenophila 0.01 12 0 F 942 Anaplasmataceae 0.00 6 6 G 768 Anaplasma 0.00 3 0 G 2883098 Candidatus Mesenet 0.00 3 3 G1 3066220 unclassified Candidatus Mesenet 0.00 1 0 G 943 Ehrlichia 0.00 1 0 G1 106178 canis group 0.00 1 1 S 944 Ehrlichia canis 0.00 1 0 F1 952 Wolbachieae 0.00 1 0 G 953 Wolbachia 0.00 1 0 G1 2640676 unclassified Wolbachia 0.00 1 1 S 3066146 Wolbachia endosymbiont (group A) of Lypha dubia 0.00 1 0 G 33993 Neorickettsia 0.00 1 0 S 33994 Neorickettsia helminthoeca 0.00 1 1 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.01 8 0 O 1921002 Holosporales 0.01 7 0 F 44746 Holosporaceae 0.00 3 0 G 2601574 Candidatus Cytomitobacter 0.00 3 3 S 2601575 Candidatus Cytomitobacter indipagum 0.00 3 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 3 3 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 G 2601651 Candidatus Nesciobacter 0.00 1 1 S 2601668 Candidatus Nesciobacter abundans 0.00 1 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 1 0 G 1521255 Candidatus Paracaedibacter 0.00 1 1 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 6 0 C1 33807 unclassified Alphaproteobacteria 0.00 6 6 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.00 4 0 O 2800060 Hyphomonadales 0.00 4 0 F 69657 Hyphomonadaceae 0.00 3 3 G 85 Hyphomonas 0.00 1 0 G 2723 Hirschia 0.00 1 0 S 2724 Hirschia baltica 0.00 1 1 S1 582402 Hirschia baltica ATCC 49814 0.00 3 0 O 2800059 Maricaulales 0.00 3 0 F 2800061 Maricaulaceae 0.00 3 0 G 74317 Maricaulis 0.00 3 3 S 74318 Maricaulis maris 0.00 1 0 O 54526 Candidatus Pelagibacterales 0.00 1 0 F 1655514 Candidatus Pelagibacteraceae 0.00 1 0 G 198251 Candidatus Pelagibacter 0.00 1 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 1 1 S 1002672 Candidatus Pelagibacter sp. IMCC9063 0.00 1 0 O 255473 Parvularculales 0.00 1 0 F 255474 Parvularculaceae 0.00 1 0 G 208215 Parvularcula 0.00 1 0 G1 2647080 unclassified Parvularcula 0.00 1 1 S 3067902 Parvularcula sp. IMCC14364 0.00 1 0 O 3108222 Geminicoccales 0.00 1 0 F 2066434 Geminicoccaceae 0.00 1 0 G 171436 Tistrella 0.00 1 0 S 171437 Tistrella mobilis 0.00 1 1 S1 1110502 Tistrella mobilis KA081020-065 0.00 1 0 O 2066490 Emcibacterales 0.00 1 0 F 2066491 Emcibacteraceae 0.00 1 0 G 2943291 Pseudemcibacter 0.00 1 1 S 2857064 Pseudemcibacter aquimaris 3.14 4200 71 C 28216 Betaproteobacteria 2.16 2891 37 O 80840 Burkholderiales 1.55 2072 151 F 75682 Oxalobacteraceae 0.92 1228 18 G 401469 Undibacterium 0.90 1207 289 G1 2630295 unclassified Undibacterium 0.69 918 918 S 3048609 Undibacterium sp. CCC3.4 0.00 3 3 S 401471 Undibacterium parvum 0.45 600 559 G 29580 Janthinobacterium 0.03 40 0 G1 2610881 unclassified Janthinobacterium 0.03 36 36 S 3065910 Janthinobacterium sp. J1-1 0.00 2 2 S 2497863 Janthinobacterium sp. 17J80-10 0.00 2 2 S 2985511 Janthinobacterium sp. TB1-E2 0.00 1 1 S 29581 Janthinobacterium lividum 0.03 45 22 F1 2895353 Telluria group 0.02 22 5 G 149698 Massilia 0.01 9 0 G1 2609279 unclassified Massilia 0.01 7 7 S 1707785 Massilia sp. WG5 0.00 1 1 S 2709303 Massilia sp. Se16.2.3 0.00 1 1 S 3126507 Massilia sp. W12 0.00 4 4 S 457921 Massilia varians 0.00 3 3 S 945844 Massilia oculi 0.00 1 1 S 2045208 Massilia violaceinigra 0.00 1 0 G 1522432 Pseudoduganella 0.00 1 0 G1 2637179 unclassified Pseudoduganella 0.00 1 1 S 2995154 Pseudoduganella sp. SL102 0.02 31 0 G 884214 Candidatus Zinderia 0.02 31 0 G1 3077950 unclassified Candidatus Zinderia 0.02 31 31 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.01 8 0 G 1344552 Noviherbaspirillum 0.01 8 0 G1 2617509 unclassified Noviherbaspirillum 0.01 8 8 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 5 0 G 1229970 Glaciimonas 0.00 5 0 G1 2644401 unclassified Glaciimonas 0.00 5 5 S 2807626 Glaciimonas sp. PAMC28666 0.00 3 2 G 963 Herbaspirillum 0.00 1 0 S 341045 Herbaspirillum hiltneri 0.00 1 1 S1 1262470 Herbaspirillum hiltneri N3 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.44 587 4 F 119060 Burkholderiaceae 0.23 311 0 G 47670 Lautropia 0.23 311 311 S 47671 Lautropia mirabilis 0.13 180 0 G 48736 Ralstonia 0.13 179 0 G1 3116862 Ralstonia solanacearum species complex 0.13 179 179 S 305 Ralstonia solanacearum 0.00 1 1 S 105219 Ralstonia mannitolilytica 0.05 63 1 G 32008 Burkholderia 0.03 37 0 G1 87882 Burkholderia cepacia complex 0.02 30 24 S 152500 Burkholderia dolosa 0.00 6 6 S1 1385930 Burkholderia dolosa PC543 0.00 3 3 S 87883 Burkholderia multivorans 0.00 2 2 S 95485 Burkholderia stabilis 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 1 S 292 Burkholderia cepacia 0.02 21 0 G1 111527 pseudomallei group 0.01 19 1 S 28450 Burkholderia pseudomallei 0.01 16 16 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S1 1249470 Burkholderia pseudomallei MSHR1079 0.00 1 1 S1 557724 Burkholderia pseudomallei 576 0.00 2 0 S 57975 Burkholderia thailandensis 0.00 2 2 S1 1249664 Burkholderia thailandensis 34 0.00 4 4 S 28095 Burkholderia gladioli 0.01 12 1 G 44013 Polynucleobacter 0.01 11 11 S 576610 Polynucleobacter necessarius 0.00 6 6 G 93217 Pandoraea 0.00 4 1 G 106589 Cupriavidus 0.00 1 1 S 68895 Cupriavidus basilensis 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.00 1 1 S 2608999 Cupriavidus cauae 0.00 4 0 G 1822464 Paraburkholderia 0.00 3 3 S 2571748 Paraburkholderia acidisoli 0.00 1 1 S 1912599 Paraburkholderia acidicola 0.00 1 1 G 1827195 Caballeronia 0.00 1 0 G 2038280 Robbsia 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.00 1 0 G 2680021 Ephemeroptericola 0.00 1 1 S 2268024 Ephemeroptericola cinctiostellae 0.12 165 29 F 80864 Comamonadaceae 0.05 70 69 G 80865 Delftia 0.00 1 1 S 558537 Delftia lacustris 0.01 17 1 G 283 Comamonas 0.01 15 0 G1 2638500 unclassified Comamonas 0.01 15 15 S 2918299 Comamonas sp. B21-038 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.01 11 10 G 34072 Variovorax 0.00 1 0 S 34073 Variovorax paradoxus 0.00 1 1 S1 595537 Variovorax paradoxus EPS 0.01 10 0 G 28065 Rhodoferax 0.01 10 10 S 2798804 Rhodoferax lithotrophicus 0.01 9 0 G 52972 Polaromonas 0.01 9 1 G1 2638319 unclassified Polaromonas 0.01 8 8 S 296591 Polaromonas sp. JS666 0.01 7 0 G 174951 Ramlibacter 0.01 7 7 S 94132 Ramlibacter tataouinensis 0.00 4 0 G 3051137 Paracidovorax 0.00 4 4 S 80867 Paracidovorax avenae 0.00 4 0 G 665874 Limnohabitans 0.00 4 0 G1 2626134 unclassified Limnohabitans 0.00 3 3 S 2986280 Limnohabitans sp. INBF002 0.00 1 1 S 1678129 Limnohabitans sp. 103DPR2 0.00 3 0 G 232523 Hylemonella 0.00 3 3 S 80880 Hylemonella gracilis 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 1 S 2716225 Hydrogenophaga crocea 0.01 14 0 F 506 Alcaligenaceae 0.01 10 8 G 507 Alcaligenes 0.00 1 1 S 511 Alcaligenes faecalis 0.00 1 0 G1 259357 unclassified Alcaligenes 0.00 1 1 S 3136634 Alcaligenes sp. SDU_A2 0.00 2 2 G 517 Bordetella 0.00 2 0 G 305976 Pusillimonas 0.00 2 0 G1 2640016 unclassified Pusillimonas 0.00 2 2 S 2716226 Pusillimonas sp. DMV24BSW_D 0.01 7 0 F 2975441 Sphaerotilaceae 0.00 5 0 G 34102 Sphaerotilus 0.00 4 4 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 S 2914710 Sphaerotilus microaerophilus 0.00 1 0 G 93681 Roseateles 0.00 1 0 G1 2626991 unclassified Roseateles 0.00 1 1 S 2877940 Roseateles sp. XES5 0.00 1 1 G 196013 Caldimonas 0.00 6 0 O1 224471 Burkholderiales genera incertae sedis 0.00 3 3 G 32012 Thiomonas 0.00 1 0 G 114248 Tepidimonas 0.00 1 1 S 307486 Tepidimonas taiwanensis 0.00 1 0 G 212743 Rhizobacter 0.00 1 0 G1 2640088 unclassified Rhizobacter 0.00 1 1 S 2753607 Rhizobacter sp. AJA081-3 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.00 3 0 F 995019 Sutterellaceae 0.00 3 0 G 40544 Sutterella 0.00 2 2 S 2494234 Sutterella megalosphaeroides 0.00 1 1 S 40545 Sutterella wadsworthensis 0.66 880 8 O 206351 Neisseriales 0.64 853 129 F 481 Neisseriaceae 0.49 650 417 G 482 Neisseria 0.08 101 101 S 28449 Neisseria subflava 0.04 47 47 S 495 Neisseria elongata 0.03 42 36 S 487 Neisseria meningitidis 0.00 6 6 S1 942513 Neisseria meningitidis WUE 2594 0.02 27 27 S 485 Neisseria gonorrhoeae 0.00 4 4 S 484 Neisseria flavescens 0.00 4 0 G1 2623750 unclassified Neisseria 0.00 3 3 S 2972775 Neisseria sp. Marseille-Q5346 0.00 1 1 S 655307 Neisseria sp. KEM232 0.00 3 3 S 486 Neisseria lactamica 0.00 1 1 S 267212 Neisseria bacilliformis 0.00 1 1 S 2666100 Neisseria brasiliensis 0.00 1 1 S 1853278 Neisseria chenwenguii 0.00 1 1 S 1815583 Neisseria musculi 0.00 1 1 S 493 Neisseria canis 0.02 31 0 G 71 Simonsiella 0.02 31 31 S 72 Simonsiella muelleri 0.01 14 0 G 538 Eikenella 0.01 14 14 S 539 Eikenella corrodens 0.01 13 0 G 32257 Kingella 0.01 10 10 S 505 Kingella oralis 0.00 2 2 S 1522312 Kingella negevensis 0.00 1 1 S 502 Kingella denitrificans 0.00 6 0 G 1193515 Snodgrassella 0.00 4 4 S 2946699 Snodgrassella communis 0.00 2 2 S 1196083 Snodgrassella alvi 0.00 5 0 G 2593687 Aquella 0.00 5 5 S 2067065 Aquella oligotrophica 0.00 2 0 G 334107 Conchiformibius 0.00 2 2 S 153493 Conchiformibius steedae 0.00 2 0 G 2898489 Paralysiella 0.00 2 2 S 2809020 Paralysiella testudinis 0.00 1 1 G 59 Vitreoscilla 0.01 16 0 F 2897176 Aquaspirillaceae 0.01 14 0 G 57479 Microvirgula 0.01 14 14 S 57480 Microvirgula aerodenitrificans 0.00 2 0 G 168470 Laribacter 0.00 2 2 S 168471 Laribacter hongkongensis 0.00 2 0 F 1499392 Chromobacteriaceae 0.00 2 0 G 57739 Vogesella 0.00 2 0 G1 2684990 unclassified Vogesella 0.00 2 2 S 1192162 Vogesella sp. LIG4 0.00 1 1 F 2897177 Chitinibacteraceae 0.21 284 91 O 32003 Nitrosomonadales 0.08 111 1 F 32011 Methylophilaceae 0.07 89 0 G 404 Methylobacillus 0.07 89 0 S 405 Methylobacillus flagellatus 0.07 89 89 S1 265072 Methylobacillus flagellatus KT 0.01 18 4 G 16 Methylophilus 0.01 14 14 S 17 Methylophilus methylotrophus 0.00 3 0 G 359407 Methylotenera 0.00 3 0 S 359408 Methylotenera mobilis 0.00 3 3 S1 583345 Methylotenera mobilis JLW8 0.04 55 1 F 2008793 Sterolibacteriaceae 0.03 46 0 G 1054211 Sulfuritalea 0.03 46 0 S 748811 Sulfuritalea hydrogenivorans 0.03 46 46 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.00 4 0 G 3050898 Sulfuricystis 0.00 4 4 S 2496847 Sulfuricystis thermophila 0.00 3 0 G 311181 Denitratisoma 0.00 2 2 S 311182 Denitratisoma oestradiolicum 0.00 1 0 G1 2609272 unclassified Denitratisoma 0.00 1 1 S 1981880 Denitratisoma sp. DHT3 0.00 1 0 G 157591 Sterolibacterium 0.00 1 1 S 157592 Sterolibacterium denitrificans 0.01 15 9 F 206379 Nitrosomonadaceae 0.00 6 4 G 914 Nitrosomonas 0.00 1 1 S 44577 Nitrosomonas ureae 0.00 1 0 G1 2609265 unclassified Nitrosomonas 0.00 1 1 S 2741553 Nitrosomonas sp. H1_AOB3 0.00 6 1 F 90627 Gallionellaceae 0.00 3 0 G 2249462 Ferrigenium 0.00 3 3 S 1682490 Ferrigenium kumadai 0.00 2 0 G 1443590 Ferriphaselus 0.00 2 2 S 1188319 Ferriphaselus amnicola 0.00 3 0 F 2008790 Thiobacillaceae 0.00 2 0 G 1938335 Sulfuritortus 0.00 2 2 S 1914471 Sulfuritortus calidifontis 0.00 1 1 G 919 Thiobacillus 0.00 3 0 F 2772226 Sulfuricellaceae 0.00 2 2 G 1778653 Sulfuriferula 0.00 1 0 G 935200 Sulfuricella 0.00 1 0 S 649841 Sulfuricella denitrificans 0.00 1 1 S1 1163617 Sulfuricella denitrificans skB26 0.04 59 0 O 206389 Rhodocyclales 0.04 48 0 F 75787 Rhodocyclaceae 0.03 40 30 G 146937 Azospira 0.01 10 10 S 404405 Azospira restricta 0.01 8 0 G 1911577 Oryzomicrobium 0.01 8 8 S 1735038 Oryzomicrobium terrae 0.01 9 0 F 2008795 Azonexaceae 0.01 9 0 G 88875 Ferribacterium 0.01 9 9 S 76259 Ferribacterium limneticum 0.00 2 0 F 2008794 Zoogloeaceae 0.00 2 0 G 2891294 Nitrogeniibacter 0.00 2 2 S 2016596 Nitrogeniibacter mangrovi 0.01 14 0 C1 119066 Betaproteobacteria incertae sedis 0.01 8 0 G 1301080 Candidatus Nasuia 0.01 8 8 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 5 2 G 1381133 Candidatus Profftella 0.00 2 2 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.00 1 1 S 669502 Candidatus Profftella armatura 0.00 1 1 G 33055 Candidatus Kinetoplastibacterium 0.00 1 0 O 1442155 Ferrovales 0.00 1 0 F 1442156 Ferrovaceae 0.00 1 0 G 416212 Ferrovum 0.00 1 1 S 416213 Ferrovum myxofaciens 0.01 9 0 C 1807140 Acidithiobacillia 0.01 9 0 O 225057 Acidithiobacillales 0.01 9 0 F 225058 Acidithiobacillaceae 0.01 9 9 G 119977 Acidithiobacillus 31.08 41644 2301 D1 1783272 Terrabacteria group 17.13 22943 151 P 1239 Bacillota 12.92 17308 512 C 91061 Bacilli 7.07 9476 108 O 186826 Lactobacillales 3.15 4226 4 F 1300 Streptococcaceae 3.14 4202 2584 G 1301 Streptococcus 0.68 914 816 S 1308 Streptococcus thermophilus 0.07 89 89 S1 767463 Streptococcus thermophilus ND03 0.01 8 8 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 1435981 Streptococcus thermophilus 1F8CT 0.09 118 118 S 2490633 Streptococcus periodonticum 0.07 98 97 S 1314 Streptococcus pyogenes 0.00 1 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 1 1 S2 160491 Streptococcus pyogenes str. Manfredo 0.07 88 78 S 1311 Streptococcus agalactiae 0.01 10 10 S1 1203670 Streptococcus agalactiae GD201008-001 0.06 80 80 S 68892 Streptococcus infantis 0.05 65 34 S 1313 Streptococcus pneumoniae 0.02 22 22 S1 1159083 Streptococcus pneumoniae PCS8235 0.01 8 8 S1 869311 Streptococcus pneumoniae SPN032672 0.00 1 1 S1 516950 Streptococcus pneumoniae CGSP14 0.02 32 3 G1 2608887 unclassified Streptococcus 0.01 16 16 S 2975324 Streptococcus sp. FSL R7-0248 0.00 5 5 S 3231906 Streptococcus sp. ZY19097 0.00 5 5 S 2664091 Streptococcus sp. zg-86 0.00 3 3 S 3028082 Streptococcus sp. 29896 0.02 26 26 S 1304 Streptococcus salivarius 0.02 25 25 S 1335 Streptococcus equinus 0.02 25 25 S 1341 Streptococcus ratti 0.02 25 25 S 1345 Streptococcus ferus 0.01 14 14 S 1326 Streptococcus acidominimus 0.01 11 0 G1 671232 Streptococcus anginosus group 0.01 8 8 S 1328 Streptococcus anginosus 0.00 3 3 S 1338 Streptococcus intermedius 0.01 11 11 S 1310 Streptococcus sobrinus 0.01 11 11 S 82348 Streptococcus pluranimalium 0.01 10 0 G1 119603 Streptococcus dysgalactiae group 0.01 8 0 S 1334 Streptococcus dysgalactiae 0.00 5 5 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 3 3 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 2 2 S 1336 Streptococcus equi 0.01 8 6 S 1307 Streptococcus suis 0.00 2 2 S1 1340847 Streptococcus suis T15 0.01 8 8 S 2021971 Streptococcus respiraculi 0.01 8 8 S 1348 Streptococcus parauberis 0.01 7 7 S 1111760 Streptococcus troglodytae 0.00 5 5 S 1811193 Streptococcus pantholopis 0.00 3 3 S 197614 Streptococcus pasteurianus 0.00 3 3 S 28037 Streptococcus mitis 0.00 3 3 S 2173853 Streptococcus chenjunshii 0.00 3 3 S 1305 Streptococcus sanguinis 0.00 3 3 S 1309 Streptococcus mutans 0.00 2 2 S 59310 Streptococcus macedonicus 0.00 2 2 S 1346 Streptococcus iniae 0.00 2 2 S 2686210 Streptococcus ruminicola 0.00 2 2 S 102886 Streptococcus didelphis 0.00 2 2 S 149016 Streptococcus urinalis 0.00 1 1 S 1302 Streptococcus gordonii 0.00 1 1 S 400065 Streptococcus merionis 0.00 1 1 S 1814128 Streptococcus halotolerans 0.00 1 1 S 1825069 Streptococcus marmotae 0.01 20 7 G 1357 Lactococcus 0.01 9 9 S 1366 Lactococcus raffinolactis 0.00 2 2 S 1359 Lactococcus cremoris 0.00 1 0 S 1363 Lactococcus garvieae 0.00 1 1 S1 1890280 Lactococcus garvieae subsp. garvieae 0.00 1 1 S 1151742 Lactococcus taiwanensis 2.81 3758 1 F 81852 Enterococcaceae 2.79 3737 12 G 1350 Enterococcus 2.59 3474 3463 S 1351 Enterococcus faecalis 0.01 11 11 S1 1201292 Enterococcus faecalis ATCC 29212 0.17 232 230 S 1352 Enterococcus faecium 0.00 2 2 S1 1328870 Enterococcus faecium UC7251 0.01 13 10 S 1354 Enterococcus hirae 0.00 3 3 S1 768486 Enterococcus hirae ATCC 9790 0.00 6 6 S 44008 Enterococcus cecorum 0.01 19 1 G 51668 Tetragenococcus 0.01 16 16 S 51669 Tetragenococcus halophilus 0.00 2 2 S 526944 Tetragenococcus osmophilus 0.00 1 1 G 2737 Vagococcus 0.78 1041 26 F 33958 Lactobacillaceae 0.27 368 84 G 1578 Lactobacillus 0.13 172 161 S 1584 Lactobacillus delbrueckii 0.01 8 4 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 4 4 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.00 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 1 S1 249265 Lactobacillus delbrueckii subsp. indicus 0.00 1 0 S1 1537158 Lactobacillus delbrueckii subsp. jakobsenii 0.00 1 1 S2 1217420 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 0.07 94 94 S 47770 Lactobacillus crispatus 0.00 5 5 S 83683 Lactobacillus amylolyticus 0.00 4 2 G1 2620435 unclassified Lactobacillus 0.00 1 1 S 2983232 Lactobacillus sp. ESL0785 0.00 1 1 S 2695882 Lactobacillus sp. 3B(2020) 0.00 3 3 S 1587 Lactobacillus helveticus 0.00 3 2 S 1579 Lactobacillus acidophilus 0.00 1 1 S1 272621 Lactobacillus acidophilus NCFM 0.00 2 2 S 267818 Lactobacillus kefiranofaciens 0.00 1 1 S 151781 Lactobacillus intestinalis 0.19 259 220 G 46255 Weissella 0.01 17 17 S 137591 Weissella cibaria 0.01 8 8 S 155866 Weissella soli 0.00 6 6 S 1249 Weissella paramesenteroides 0.00 4 4 S 1162633 Weissella diestrammenae 0.00 2 2 S 1631871 Weissella jogaejeotgali 0.00 1 1 S 1583 Weissella confusa 0.00 1 1 S 165096 Weissella koreensis 0.07 95 86 G 1243 Leuconostoc 0.01 7 7 S 1246 Leuconostoc lactis 0.00 1 1 S 1252 Leuconostoc carnosum 0.00 1 1 S 2766470 Leuconostoc falkenbergense 0.03 46 5 G 2742598 Limosilactobacillus 0.01 18 18 S 97478 Limosilactobacillus mucosae 0.01 15 15 S 1613 Limosilactobacillus fermentum 0.01 8 8 S 1598 Limosilactobacillus reuteri 0.03 44 0 G 2767842 Lactiplantibacillus 0.02 29 29 S 1589 Lactiplantibacillus pentosus 0.01 14 11 S 1590 Lactiplantibacillus plantarum 0.00 3 3 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 1 1 S 60520 Lactiplantibacillus paraplantarum 0.03 39 3 G 2767887 Ligilactobacillus 0.02 22 22 S 1623 Ligilactobacillus ruminis 0.00 6 6 S 89059 Ligilactobacillus acidipiscis 0.00 4 3 S 1624 Ligilactobacillus salivarius 0.00 1 1 S1 1194971 Ligilactobacillus salivarius str. Ren 0.00 2 2 S 1606 Ligilactobacillus aviarius 0.00 1 1 S 1605 Ligilactobacillus animalis 0.00 1 1 S 1622 Ligilactobacillus murinus 0.02 27 26 G 2767889 Loigolactobacillus 0.00 1 1 S 1610 Loigolactobacillus coryniformis 0.02 26 0 G 2767886 Levilactobacillus 0.02 22 22 S 1580 Levilactobacillus brevis 0.00 2 2 S 267363 Levilactobacillus zymae 0.00 2 2 S 2292255 Levilactobacillus suantsaii 0.02 21 0 G 2930384 Periweissella 0.02 21 21 S 2506420 Periweissella cryptocerci 0.02 21 1 G 2759736 Lacticaseibacillus 0.01 14 14 S 1597 Lacticaseibacillus paracasei 0.00 3 3 S 3025672 Lacticaseibacillus pabuli 0.00 2 2 S 47715 Lacticaseibacillus rhamnosus 0.00 1 1 S 171523 Lacticaseibacillus pantheris 0.01 20 19 G 2767893 Lentilactobacillus 0.00 1 1 S 1581 Lentilactobacillus buchneri 0.01 19 0 G 2767884 Lapidilactobacillus 0.01 19 19 S 51664 Lapidilactobacillus dextrinicus 0.01 9 1 G 2767881 Fructilactobacillus 0.01 8 8 S 1625 Fructilactobacillus sanfranciscensis 0.01 7 5 G 1253 Pediococcus 0.00 1 0 G1 554805 unclassified Pediococcus 0.00 1 1 S 2962679 Pediococcus sp. AC40 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.00 4 3 G 2767877 Apilactobacillus 0.00 1 1 S 2923364 Apilactobacillus apisilvae 0.00 3 0 G 2767874 Acetilactobacillus 0.00 3 3 S 1720083 Acetilactobacillus jinshanensis 0.00 2 2 G 46254 Oenococcus 0.00 1 0 G 2767879 Companilactobacillus 0.00 1 1 S 1847728 Companilactobacillus allii 0.00 1 0 G 2767878 Bombilactobacillus 0.00 1 1 S 1303590 Bombilactobacillus bombi 0.00 1 0 G 2767885 Latilactobacillus 0.00 1 1 S 28038 Latilactobacillus curvatus 0.00 1 0 G 2767891 Schleiferilactobacillus 0.00 1 1 S 304207 Schleiferilactobacillus harbinensis 0.00 1 1 G 3118928 Xylocopilactobacillus 0.22 298 1 F 186828 Carnobacteriaceae 0.21 285 0 G 117563 Granulicatella 0.18 239 239 S 46124 Granulicatella adiacens 0.03 46 46 S 137732 Granulicatella elegans 0.00 5 3 G 29393 Dolosigranulum 0.00 2 0 G1 2622049 unclassified Dolosigranulum 0.00 2 2 S 3110289 Dolosigranulum sp. MSK312 0.00 2 2 G 2747 Carnobacterium 0.00 2 0 G 82800 Desemzia 0.00 2 2 S 82801 Desemzia incerta 0.00 2 0 G 191769 Marinilactibacillus 0.00 2 0 G1 2632303 unclassified Marinilactibacillus 0.00 2 2 S 1911586 Marinilactibacillus sp. 15R 0.00 1 0 G 82802 Trichococcus 0.00 1 0 G1 189664 environmental samples 0.00 1 1 S 189665 uncultured Trichococcus sp. 0.03 45 2 F 186827 Aerococcaceae 0.02 23 18 G 1375 Aerococcus 0.00 3 3 S 1376 Aerococcus urinae 0.00 2 2 S 87541 Aerococcus christensenii 0.01 8 0 G 66831 Facklamia 0.01 8 8 S 178214 Facklamia hominis 0.01 8 0 G 89092 Ignavigranum 0.01 8 8 S 89093 Ignavigranum ruoffiae 0.00 4 0 G 2862144 Ruoffia 0.00 4 4 S 87458 Ruoffia tabacinasalis 5.46 7320 257 O 1385 Bacillales 2.33 3127 60 F 186817 Bacillaceae 1.48 1989 279 G 1386 Bacillus 0.71 951 48 G1 86661 Bacillus cereus group 0.23 303 245 S 1428 Bacillus thuringiensis 0.01 19 19 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 12 12 S1 180850 Bacillus thuringiensis serovar indiana 0.01 11 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.01 11 11 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.01 10 10 S1 1217737 Bacillus thuringiensis HD-789 0.00 2 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 2 2 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 2 2 S1 529122 Bacillus thuringiensis YBT-1518 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.19 255 100 S 1396 Bacillus cereus 0.06 75 75 S1 1003239 Bacillus cereus C1L 0.05 67 67 S1 1454382 Bacillus cereus D17 0.01 9 9 S1 572264 Bacillus cereus 03BB102 0.00 4 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 4 4 S2 637380 Bacillus cereus biovar anthracis str. CI 0.13 174 165 S 1392 Bacillus anthracis 0.01 9 9 S1 261591 Bacillus anthracis str. Vollum 0.04 60 60 S 2026191 Bacillus luti 0.03 45 0 G2 2750818 unclassified Bacillus cereus group 0.03 45 45 S 1892404 Bacillus sp. ABP14 0.02 33 32 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.01 15 15 S 64104 Bacillus pseudomycoides 0.00 6 6 S 2026186 Bacillus paranthracis 0.00 6 6 S 155322 Bacillus toyonensis 0.00 3 3 S 2817477 Bacillus paramobilis 0.00 2 2 S 1890302 Bacillus wiedmannii 0.00 1 1 S 580165 Bacillus cytotoxicus 0.49 653 17 G1 653685 Bacillus subtilis group 0.42 560 2 G2 1938374 Bacillus amyloliquefaciens group 0.38 505 503 S 492670 Bacillus velezensis 0.00 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.00 1 1 S1 1458206 Bacillus velezensis NJN-6 0.04 52 51 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 1 1 S 659243 Bacillus siamensis 0.04 54 36 S 1423 Bacillus subtilis 0.01 11 11 S1 86029 Bacillus subtilis subsp. natto 0.01 7 7 S1 135461 Bacillus subtilis subsp. subtilis 0.01 10 10 S 483913 Bacillus inaquosorum 0.00 5 4 S 1452 Bacillus atrophaeus 0.00 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 3 3 S 1648923 Bacillus paralicheniformis 0.00 2 2 S 1402 Bacillus licheniformis 0.00 2 0 G2 653388 Bacillus mojavensis subgroup 0.00 2 2 S 260554 Bacillus halotolerans 0.04 50 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.02 21 21 S 2874284 Bacillus sp. CRB-7 0.01 7 7 S 3077323 Bacillus sp. SI2 0.00 6 6 S 1806216 Bacillus sp. RZ2MS9 0.00 5 5 S 467262 Bacillus sp. T3 0.00 4 4 S 2925318 Bacillus sp. N5-665 0.00 4 4 S 2841656 Bacillus sp. ZHX3 0.00 2 2 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2709784 Bacillus sp. KH172YL63 0.03 39 0 G1 1792192 Bacillus altitudinis complex 0.03 39 39 S 293387 Bacillus altitudinis 0.01 9 9 S 1408 Bacillus pumilus 0.01 7 7 S 561879 Bacillus safensis 0.00 1 1 S 1983719 Bacillus shivajii 0.65 866 0 G 84406 Virgibacillus 0.64 863 863 S 447199 Virgibacillus salarius 0.00 3 0 G1 2620237 unclassified Virgibacillus 0.00 3 3 S 2419841 Virgibacillus sp. Bac330 0.06 80 52 G 400634 Lysinibacillus 0.01 12 0 G1 2636778 unclassified Lysinibacillus 0.01 12 12 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 6 6 S 2590012 Lysinibacillus agricola 0.00 4 4 S 28031 Lysinibacillus fusiformis 0.00 3 1 S 1421 Lysinibacillus sphaericus 0.00 2 2 S1 444177 Lysinibacillus sphaericus C3-41 0.00 3 3 S 2086577 Lysinibacillus timonensis 0.02 32 0 G 2800373 Priestia 0.02 30 25 S 1404 Priestia megaterium 0.00 5 5 S1 1006007 Priestia megaterium WSH-002 0.00 2 2 S 412384 Priestia aryabhattai 0.01 19 0 G 2675229 Peribacillus 0.01 15 15 S 264697 Peribacillus muralis 0.00 3 3 S 1407 Peribacillus psychrosaccharolyticus 0.00 1 1 S 450367 Peribacillus frigoritolerans 0.01 18 0 G 45667 Halobacillus 0.01 11 11 S 45668 Halobacillus litoralis 0.00 6 6 S 2932257 Halobacillus salinarum 0.00 1 1 S 402384 Halobacillus mangrovi 0.01 10 2 G 2837504 Heyndrickxia 0.01 8 8 S 1398 Heyndrickxia coagulans 0.01 7 0 G 2675233 Metabacillus 0.01 7 0 G1 2675274 unclassified Metabacillus 0.01 7 7 S 2897333 Metabacillus sp. B2-18 0.01 7 0 G 175304 Lentibacillus 0.00 4 4 S 1472767 Lentibacillus amyloliquefaciens 0.00 2 2 S 2911514 Lentibacillus daqui 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.01 7 0 G 2785518 Radiobacillus 0.01 7 7 S 2594883 Radiobacillus deserti 0.00 5 1 G 2685905 Salicibibacter 0.00 4 4 S 2743001 Salicibibacter cibi 0.00 5 1 G 129337 Geobacillus 0.00 2 0 S 33940 Geobacillus thermodenitrificans 0.00 2 2 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 1 0 G1 1505648 Geobacillus thermoleovorans group 0.00 1 1 S 33941 Geobacillus thermoleovorans 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1233873 Geobacillus sp. GHH01 0.00 5 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 5 0 S 86665 Halalkalibacterium halodurans 0.00 5 5 S1 272558 Halalkalibacterium halodurans C-125 0.00 3 0 G 2675230 Cytobacillus 0.00 2 2 S 665099 Cytobacillus oceanisediminis 0.00 1 1 S 859144 Cytobacillus gottheilii 0.00 2 2 G 1221880 Psychrobacillus 0.00 2 0 G 2675232 Neobacillus 0.00 2 2 S 1193713 Neobacillus mesonae 0.00 2 0 G 2837510 Siminovitchia 0.00 2 2 S 254758 Siminovitchia fortis 0.00 2 0 G 150247 Anoxybacillus 0.00 2 0 S 33934 Anoxybacillus flavithermus 0.00 2 2 S1 491915 Anoxybacillus flavithermus WK1 0.00 1 0 G 2893056 Halalkalibacter 0.00 1 1 S 199441 Halalkalibacter krulwichiae 0.00 1 1 G 182709 Oceanobacillus 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 0 G 2005375 Alkalicoccus 0.00 1 1 S 1667239 Alkalicoccus halolimnae 0.00 1 0 G 459532 Terribacillus 0.00 1 1 S 361277 Terribacillus saccharophilus 0.00 1 0 G 1433999 Domibacillus 0.00 1 0 G1 2632383 unclassified Domibacillus 0.00 1 1 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 2.25 3020 6 F 90964 Staphylococcaceae 2.20 2946 214 G 1279 Staphylococcus 1.74 2333 2300 S 1280 Staphylococcus aureus 0.02 26 26 S1 1229492 Staphylococcus aureus 08BA02176 0.00 5 5 S1 273036 Staphylococcus aureus RF122 0.00 2 2 S1 548473 Staphylococcus aureus subsp. aureus TCH60 0.06 87 87 S 70255 Staphylococcus condimenti 0.06 78 75 S 29388 Staphylococcus capitis 0.00 3 3 S1 74703 Staphylococcus capitis subsp. urealyticus 0.06 75 69 S 1282 Staphylococcus epidermidis 0.00 6 6 S1 176280 Staphylococcus epidermidis ATCC 12228 0.03 37 37 S 28035 Staphylococcus lugdunensis 0.02 27 27 S 1283 Staphylococcus haemolyticus 0.02 25 0 G1 2815305 Staphylococcus intermedius group 0.02 24 24 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 53344 Staphylococcus delphini 0.01 15 15 S 1286 Staphylococcus simulans 0.01 13 13 S 1290 Staphylococcus hominis 0.01 13 13 S 29378 Staphylococcus arlettae 0.00 6 6 S 985002 Staphylococcus argenteus 0.00 4 4 S 214473 Staphylococcus nepalensis 0.00 3 3 S 170573 Staphylococcus pettenkoferi 0.00 3 3 S 29382 Staphylococcus cohnii 0.00 3 3 S 2044912 Staphylococcus debuckii 0.00 2 2 S 46126 Staphylococcus chromogenes 0.00 2 2 S 246432 Staphylococcus equorum 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.00 1 1 S 45972 Staphylococcus pasteuri 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2989772 Staphylococcus sp. IVB6246 0.00 1 1 S 155085 Staphylococcus lutrae 0.00 1 1 S 29385 Staphylococcus saprophyticus 0.00 1 1 S 29380 Staphylococcus caprae 0.03 43 0 G 489909 Nosocomiicoccus 0.03 43 43 S 1232430 Nosocomiicoccus massiliensis 0.02 22 20 G 2803850 Mammaliicoccus 0.00 2 2 S 1296 Mammaliicoccus sciuri 0.00 2 0 G 227979 Jeotgalicoccus 0.00 2 0 G1 2630462 unclassified Jeotgalicoccus 0.00 2 2 S 946435 Jeotgalicoccus sp. ATCC 8456 0.00 1 0 G 69965 Macrococcus 0.00 1 1 S 2875764 Macrococcus armenti 0.32 424 0 F 539738 Gemellaceae 0.32 424 254 G 1378 Gemella 0.10 135 18 G1 2624949 unclassified Gemella 0.09 117 117 S 2840371 Gemella sp. zg-570 0.03 34 34 S 84135 Gemella sanguinis 0.00 1 1 S 29391 Gemella morbillorum 0.13 169 2 F 186822 Paenibacillaceae 0.11 148 8 G 44249 Paenibacillus 0.04 52 17 G1 185978 unclassified Paenibacillus 0.01 11 11 S 2741301 Paenibacillus sp. URB8-2 0.01 9 9 S 715179 Paenibacillus sp. sptzw28 0.01 7 7 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 4 4 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 2 2 S 1306526 Paenibacillus sp. HWE-109 0.00 1 1 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.03 36 36 S 79263 Paenibacillus chitinolyticus 0.02 27 27 S 1616788 Paenibacillus bovis 0.01 16 11 S 1406 Paenibacillus polymyxa 0.00 4 4 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 1 1 S1 349520 Paenibacillus polymyxa E681 0.00 4 4 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 539262 Paenibacillus hunanensis 0.00 1 1 S 2909671 Paenibacillus spongiae 0.00 1 1 S 2704463 Paenibacillus rhizovicinus 0.00 1 1 S 1462996 Paenibacillus yonginensis 0.00 1 1 S 61624 Paenibacillus mucilaginosus 0.01 11 0 F1 85151 Aneurinibacillus group 0.01 11 9 G 55079 Aneurinibacillus 0.00 2 2 S 1500254 Aneurinibacillus soli 0.00 5 1 G 329857 Cohnella 0.00 4 4 S 2507935 Cohnella abietis 0.00 3 1 G 55080 Brevibacillus 0.00 2 2 S 45462 Brevibacillus borstelensis 0.09 125 0 F 186820 Listeriaceae 0.09 120 13 G 1637 Listeria 0.05 67 0 S 1638 Listeria ivanovii 0.05 67 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.05 67 67 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.02 24 0 G1 2642072 unclassified Listeria 0.02 24 24 S 1844999 Listeria sp. PSOL-1 0.01 12 12 S 1639 Listeria monocytogenes 0.00 3 3 S 1006155 Listeria weihenstephanensis 0.00 1 1 S 1641 Listeria grayi 0.00 5 0 G 2755 Brochothrix 0.00 5 5 S 2756 Brochothrix thermosphacta 0.06 81 9 F 186818 Planococcaceae 0.03 39 38 G 1372 Planococcus 0.00 1 1 S 414778 Planococcus donghaensis 0.01 17 0 G 651660 Paenisporosarcina 0.01 15 15 S 2320858 Paenisporosarcina cavernae 0.00 2 2 S 417367 Paenisporosarcina antarctica 0.01 11 0 G 160795 Ureibacillus 0.01 10 10 S 367743 Ureibacillus thermophilus 0.00 1 1 S 51173 Ureibacillus thermosphaericus 0.00 4 2 G 1569 Sporosarcina 0.00 1 1 S 633404 Sporosarcina thermotolerans 0.00 1 0 G1 2647733 unclassified Sporosarcina 0.00 1 1 S 2810514 Sporosarcina sp. Marseille-Q4063 0.00 1 0 G 648800 Solibacillus 0.00 1 0 S 76853 Solibacillus silvestris 0.00 1 1 S1 1002809 Solibacillus silvestris StLB046 0.04 59 0 F 3076164 Abyssicoccaceae 0.04 59 0 G 1955413 Abyssicoccus 0.04 59 59 S 1817405 Abyssicoccus albus 0.02 24 0 O1 539002 Bacillales incertae sedis 0.02 24 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.02 24 17 G 33986 Exiguobacterium 0.00 6 6 S 1428684 Exiguobacterium alkaliphilum 0.00 1 0 G1 2644629 unclassified Exiguobacterium 0.00 1 1 S 3112419 Exiguobacterium sp. 9-2 0.01 16 5 F 186824 Thermoactinomycetaceae 0.00 4 0 G 292635 Laceyella 0.00 4 4 S 37482 Laceyella sacchari 0.00 3 1 G 1274351 Kroppenstedtia 0.00 1 1 S 714067 Kroppenstedtia eburnea 0.00 1 1 S 1380685 Kroppenstedtia pulmonis 0.00 2 0 G 1348505 Polycladomyces 0.00 2 2 S 1125966 Polycladomyces abyssicola 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 0.00 1 0 G 2689589 Staphylospora 0.00 1 1 S 2490858 Staphylospora marina 0.01 15 1 F 186823 Alicyclobacillaceae 0.01 12 0 G 29330 Alicyclobacillus 0.01 11 11 S 2931921 Alicyclobacillus mengziensis 0.00 1 0 G1 2622400 unclassified Alicyclobacillus 0.00 1 1 S 2665646 Alicyclobacillus sp. SO9 0.00 2 2 G 1129704 Kyrpidia 0.00 3 0 F 186821 Sporolactobacillaceae 0.00 2 1 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 1.79 2397 0 C 909932 Negativicutes 1.76 2359 0 O 1843489 Veillonellales 1.76 2359 4 F 31977 Veillonellaceae 1.15 1534 357 G 29465 Veillonella 0.44 595 595 S 423477 Veillonella rogosae 0.29 389 389 S 39777 Veillonella atypica 0.13 180 180 S 29466 Veillonella parvula 0.01 13 13 S 248315 Veillonella rodentium 0.48 648 23 G 906 Megasphaera 0.32 424 423 S 907 Megasphaera elsdenii 0.00 1 1 S1 1064535 Megasphaera elsdenii DSM 20460 0.08 104 104 S 1675036 Megasphaera hexanoica 0.07 96 96 S 2144175 Megasphaera stantonii 0.00 1 1 S 1232428 Megasphaera massiliensis 0.13 173 11 G 39948 Dialister 0.12 157 157 S 487173 Dialister succinatiphilus 0.00 4 4 S 39950 Dialister pneumosintes 0.00 1 1 S 2161821 Dialister massiliensis 0.03 38 0 O 909929 Selenomonadales 0.03 35 0 F 1843491 Selenomonadaceae 0.02 25 8 G 970 Selenomonas 0.01 7 1 G1 2637378 unclassified Selenomonas 0.00 4 4 S 1884263 Selenomonas sp. oral taxon 920 0.00 1 1 S 713030 Selenomonas sp. oral taxon 136 0.00 1 1 S 3095337 Selenomonas sp. TAMA-11512 0.00 5 5 S 69823 Selenomonas sputigena 0.00 4 0 S 971 Selenomonas ruminantium 0.00 4 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.00 4 4 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.00 1 1 S 2754044 Selenomonas timonae 0.01 7 0 G 158846 Megamonas 0.01 7 7 S 158847 Megamonas hypermegale 0.00 3 0 G 864 Pectinatus 0.00 3 3 S 865 Pectinatus frisingensis 0.00 3 0 F 1843490 Sporomusaceae 0.00 2 0 G 81463 Anaeromusa 0.00 2 0 G1 673272 environmental samples 0.00 2 2 S 673273 uncultured Anaeromusa sp. 0.00 1 0 G 2375 Sporomusa 0.00 1 1 S 2377 Sporomusa termitida 1.60 2146 24 C 186801 Clostridia 0.69 929 2 O 3085636 Lachnospirales 0.68 909 60 F 186803 Lachnospiraceae 0.16 214 51 G 1164882 Lachnoanaerobaculum 0.09 117 117 S 617123 Lachnoanaerobaculum umeaense 0.03 46 46 S 2490855 Lachnoanaerobaculum gingivalis 0.14 181 13 G 841 Roseburia 0.12 164 164 S 301301 Roseburia hominis 0.00 4 0 G1 2637578 unclassified Roseburia 0.00 3 3 S 1261635 Roseburia sp. 831b 0.00 1 1 S 1261634 Roseburia sp. 499 0.08 105 0 G 1766253 Agathobacter 0.08 105 105 S 39491 Agathobacter rectalis 0.07 91 0 G 1213720 Stomatobaculum 0.07 91 0 G1 2643635 unclassified Stomatobaculum 0.07 91 91 S 3059030 Stomatobaculum sp. F0698 0.05 72 28 G 2316020 Mediterraneibacter 0.02 27 27 S 33038 Mediterraneibacter gnavus 0.01 16 0 S 46228 [Ruminococcus] lactaris 0.01 16 16 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.00 1 1 S 33039 [Ruminococcus] torques 0.03 41 2 G 33042 Coprococcus 0.02 25 25 S 116085 Coprococcus catus 0.01 14 0 G1 2684943 unclassified Coprococcus 0.01 14 14 S 751585 Coprococcus sp. ART55/1 0.03 38 0 G 1506553 Lachnoclostridium 0.02 32 0 S 66219 Lachnoclostridium phytofermentans 0.02 32 32 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 4 4 S 89153 [Clostridium] hylemonae 0.00 2 2 S 1512 [Clostridium] symbiosum 0.02 24 0 G 830 Butyrivibrio 0.02 24 24 S 831 Butyrivibrio fibrisolvens 0.01 18 0 G 28050 Lachnospira 0.01 18 18 S 39485 Lachnospira eligens 0.01 15 2 G 572511 Blautia 0.01 10 0 S 40520 Blautia obeum 0.01 8 8 S1 657314 Blautia obeum A2-162 0.00 2 2 S1 411459 Blautia obeum ATCC 29174 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 1 S 1912897 Blautia argi 0.00 1 0 G1 2648079 unclassified Blautia 0.00 1 1 S 2479767 Blautia sp. SC05B48 0.01 15 0 G 189330 Dorea 0.01 11 11 S 88431 Dorea longicatena 0.00 4 4 S 39486 Dorea formicigenerans 0.01 14 0 G 2383 Candidatus Epulonipiscium 0.01 14 14 S 420336 Candidatus Epulonipiscium viviparus 0.00 5 0 G 2163168 Kineothrix 0.00 5 0 G1 2625420 unclassified Kineothrix 0.00 5 5 S 3123317 Kineothrix sp. IPX-CK 0.00 4 3 G 207244 Anaerostipes 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.00 3 0 G 3031933 Chordicoccus 0.00 3 3 S 2709410 Chordicoccus furentiruminis 0.00 2 0 G 248744 Marvinbryantia 0.00 2 0 S 168384 Marvinbryantia formatexigens 0.00 2 2 S1 478749 Marvinbryantia formatexigens DSM 14469 0.00 2 0 G 2944195 Qiania 0.00 2 2 S 2763669 Qiania dongpingensis 0.00 2 0 G 2719231 Lacrimispora 0.00 1 1 S 384636 Lacrimispora xylanisolvens 0.00 1 0 G1 2719232 unclassified Lacrimispora 0.00 1 1 S 3151850 Lacrimispora sp. BS-2 0.00 1 0 G 1506577 Tyzzerella 0.00 1 1 S 36835 [Clostridium] colinum 0.00 1 0 G 2569097 Anaerobutyricum 0.00 1 1 S 39488 Anaerobutyricum hallii 0.00 1 0 G 3076670 Claveliimonas 0.00 1 1 S 3028070 Claveliimonas bilis 0.01 16 0 F 3118652 Anaerotignaceae 0.01 16 0 G 2039240 Anaerotignum 0.01 16 0 S 28446 Anaerotignum propionicum 0.01 16 16 S1 991789 Anaerotignum propionicum DSM 1682 0.00 1 0 F 2603322 Vallitaleaceae 0.00 1 1 G 1348611 Vallitalea 0.00 1 0 F 3018741 Cellulosilyticaceae 0.00 1 1 G 698776 Cellulosilyticum 0.62 826 81 O 186802 Eubacteriales 0.39 522 5 F 216572 Oscillospiraceae 0.20 262 158 G 216851 Faecalibacterium 0.08 101 101 S 853 Faecalibacterium prausnitzii 0.00 2 2 S 411483 Faecalibacterium duncaniae 0.00 1 1 S 3030638 Faecalibacterium taiwanense 0.06 87 0 G 236752 Fastidiosipila 0.06 87 87 S 236753 Fastidiosipila sanguinis 0.06 78 0 G 2842531 Solibaculum 0.06 78 78 S 2780922 Solibaculum mannosilyticum 0.03 41 5 G 1263 Ruminococcus 0.02 24 24 S 1161942 Ruminococcus champanellensis 0.01 8 8 S 2564099 Ruminococcus bovis 0.00 3 3 G1 2608920 unclassified Ruminococcus 0.00 1 1 S 438033 Ruminococcus gauvreauii 0.01 19 0 G 292632 Subdoligranulum 0.01 19 19 S 214851 Subdoligranulum variabile 0.01 16 2 G 2892396 Vescimonas 0.01 14 14 S 2714353 Vescimonas fastidiosa 0.01 8 0 G 2038676 Paludihabitans 0.01 8 0 G1 2644543 unclassified Paludihabitans 0.01 8 8 S 3070656 Paludicola sp. MB14-C6 0.00 4 0 G 459786 Oscillibacter 0.00 4 4 S 2763056 Oscillibacter hominis 0.00 1 0 G 946234 Flavonifractor 0.00 1 1 S 292800 Flavonifractor plautii 0.00 1 0 G 1905344 Ruthenibacterium 0.00 1 1 S 1550024 Ruthenibacterium lactatiformans 0.05 61 0 O1 538999 Eubacteriales incertae sedis 0.04 55 4 G 1686313 Fenollaria 0.04 51 51 S 938288 Fenollaria massiliensis 0.00 4 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 4 0 G 2886866 Sinanaerobacter 0.00 4 0 G1 2886867 unclassified Sinanaerobacter 0.00 4 4 S 3111540 Sinanaerobacter sp. ZZT-01 0.00 2 0 G 2717089 Massilistercora 0.00 2 2 S 2086584 Massilistercora timonensis 0.04 57 44 F 31984 Heliobacteriaceae 0.01 13 0 G 79598 Heliorestis 0.01 13 13 S 356322 Heliorestis convoluta 0.03 35 0 F 31979 Clostridiaceae 0.03 34 5 G 1485 Clostridium 0.01 9 0 G1 2614128 unclassified Clostridium 0.00 4 4 S 3070996 Clostridium sp. MB40-C1 0.00 3 3 S 2930219 Clostridium sp. BJN0001 0.00 1 1 S 1042156 Clostridium sp. SY8519 0.00 1 1 S 2483110 Clostridium sp. JN-1 0.01 7 1 S 1491 Clostridium botulinum 0.00 6 6 S1 1408283 Clostridium botulinum CDC_1436 0.00 5 5 S 1502 Clostridium perfringens 0.00 3 3 S 1488 Clostridium acetobutylicum 0.00 1 1 S 84023 Clostridium autoethanogenum 0.00 1 1 S 1492 Clostridium butyricum 0.00 1 1 S 36839 Clostridium felsineum 0.00 1 1 S 182773 Clostridium isatidis 0.00 1 0 S 1501 Clostridium pasteurianum 0.00 1 1 S1 86416 Clostridium pasteurianum BC1 0.00 1 0 G 1155385 Proteiniclasticum 0.00 1 0 G1 2630696 unclassified Proteiniclasticum 0.00 1 1 S 3036945 Proteiniclasticum sp. QWL-01 0.02 33 0 F 2867375 Desulfallaceae 0.02 33 0 G 2867376 Desulfoscipio 0.02 33 0 S 102134 Desulfoscipio gibsoniae 0.02 33 33 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.01 10 0 F 186807 Peptococcaceae 0.01 8 6 G 2916693 Desulforamulus 0.00 2 0 S 1564 Desulforamulus ruminis 0.00 2 2 S1 696281 Desulforamulus ruminis DSM 2154 0.00 1 0 G 2282742 Desulfofarcimen 0.00 1 0 S 58138 Desulfofarcimen acetoxidans 0.00 1 1 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.00 1 0 G 2924872 Acididesulfobacillus 0.00 1 1 S 1561005 Acididesulfobacillus acetoxydans 0.01 9 0 F 186806 Eubacteriaceae 0.01 7 0 G 1730 Eubacterium 0.01 7 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.01 7 7 S 2841528 Eubacterium sp. MSJ-33 0.00 2 2 G 33951 Acetobacterium 0.01 9 0 F 3046368 Aristaeellaceae 0.01 9 6 G 3046369 Aristaeella 0.00 3 3 S 3046382 Aristaeella hokkaidonensis 0.00 5 0 F 3085642 Butyricicoccaceae 0.00 5 0 G 1928820 Intestinibacillus 0.00 5 0 G1 2635293 unclassified Intestinibacillus 0.00 5 5 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 3 0 F 1491775 Proteinivoraceae 0.00 2 2 G 1491776 Proteinivorax 0.00 1 0 G 2838170 Alkalicella 0.00 1 1 S 2731377 Alkalicella caledoniensis 0.00 1 0 F 3047432 Maliibacteriaceae 0.00 1 0 G 3047433 Maliibacterium 0.00 1 1 S 2086585 Maliibacterium massiliense 0.22 293 0 O 53433 Halanaerobiales 0.22 289 0 F 53434 Halobacteroidaceae 0.20 273 0 G 42417 Halobacteroides 0.20 273 0 S 42422 Halobacteroides halobius 0.20 273 273 S1 748449 Halobacteroides halobius DSM 5150 0.01 16 0 G 28186 Acetohalobium 0.01 16 0 S 28187 Acetohalobium arabaticum 0.01 16 16 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 2 0 O1 387655 Halanaerobiales incertae sedis 0.00 2 0 G 1769008 Anoxybacter 0.00 2 2 S 1323375 Anoxybacter fermentans 0.00 2 0 F 3046412 Halothermotrichaceae 0.00 2 0 G 32636 Halothermothrix 0.00 2 0 S 31909 Halothermothrix orenii 0.00 2 2 S1 373903 Halothermothrix orenii H 168 0.05 67 0 O 3082720 Peptostreptococcales 0.05 64 6 F 186804 Peptostreptococcaceae 0.03 46 0 G 1257 Peptostreptococcus 0.03 46 46 S 3003601 Peptostreptococcus equinus 0.01 7 0 G 1505657 Intestinibacter 0.01 7 7 S 261299 Intestinibacter bartlettii 0.00 3 0 G 1870884 Clostridioides 0.00 3 3 S 1496 Clostridioides difficile 0.00 2 0 G 1501226 Romboutsia 0.00 2 0 G1 2626894 unclassified Romboutsia 0.00 2 2 S 2708053 Romboutsia sp. 13368 0.00 2 0 F 3030910 Anaerovoracaceae 0.00 2 2 G 86331 Mogibacterium 0.00 1 0 F 3118657 Thermotaleaceae 0.00 1 0 G 390805 Geosporobacter 0.00 1 1 S 1424294 Geosporobacter ferrireducens 0.00 2 0 C1 189325 Clostridia incertae sedis 0.00 2 0 G 3136917 Helicovermis 0.00 2 2 S 3065157 Helicovermis profundi 0.00 2 0 O 3039167 Moorellales 0.00 2 0 F 3039168 Moorellaceae 0.00 2 0 G 202949 Thermanaeromonas 0.00 2 0 S 161154 Thermanaeromonas toyohensis 0.00 2 2 S1 698762 Thermanaeromonas toyohensis ToBE 0.00 2 0 O 3082768 Christensenellales 0.00 2 0 F 990719 Christensenellaceae 0.00 2 2 G 990721 Christensenella 0.00 1 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 140458 Thermacetogenium 0.00 1 0 S 85874 Thermacetogenium phaeum 0.00 1 1 S1 1089553 Thermacetogenium phaeum DSM 12270 0.60 810 1 C 1737404 Tissierellia 0.60 799 2 O 1737405 Tissierellales 0.59 795 2 F 1570339 Peptoniphilaceae 0.37 496 97 G 165779 Anaerococcus 0.13 169 0 S 33034 Anaerococcus prevotii 0.13 169 169 S1 525919 Anaerococcus prevotii DSM 20548 0.10 131 131 S 1755241 Anaerococcus nagyae 0.05 61 0 G1 2614126 unclassified Anaerococcus 0.05 61 61 S 3036300 Anaerococcus sp. Marseille-Q7828 0.03 37 37 S 1870984 Anaerococcus mediterraneensis 0.00 1 1 S 33037 Anaerococcus vaginalis 0.12 156 10 G 162289 Peptoniphilus 0.08 106 106 S 54005 Peptoniphilus harei 0.03 35 35 S 3036303 Peptoniphilus genitalis 0.00 5 5 S 54006 Peptoniphilus ivorii 0.09 124 0 G 150022 Finegoldia 0.09 124 124 S 1260 Finegoldia magna 0.01 10 0 G 1161127 Murdochiella 0.01 10 10 S 1852373 Murdochiella vaginalis 0.01 7 0 G 543311 Parvimonas 0.01 7 7 S 33033 Parvimonas micra 0.00 1 0 F 2042895 Gottschalkiaceae 0.00 1 0 G 1505664 Gottschalkia 0.00 1 0 S 1556 Gottschalkia acidurici 0.00 1 1 S1 1128398 Gottschalkia acidurici 9a 0.00 1 0 F 2992719 Tepidimicrobiaceae 0.00 1 0 G 1354809 Keratinibaculum 0.00 1 1 S 1278232 Keratinibaculum paraultunense 0.01 10 0 C1 1737407 Tissierellia incertae sedis 0.01 10 0 G 1582879 Ezakiella 0.01 10 10 S 46507 Ezakiella coagulans 0.09 127 0 C 526524 Erysipelotrichia 0.09 127 0 O 526525 Erysipelotrichales 0.06 85 57 F 128827 Erysipelotrichaceae 0.01 12 0 G 123375 Solobacterium 0.01 12 12 S 102148 Solobacterium moorei 0.01 7 1 G 174708 Allobaculum 0.00 5 5 S 2834459 Allobaculum mucilyticum 0.00 1 0 G1 2623473 unclassified Allobaculum 0.00 1 1 S 2853432 Allobaculum sp. Allo2 0.00 5 0 G 2749267 Amedibacterium 0.00 5 5 S 2583452 Amedibacterium intestinale 0.00 2 0 G 1729679 Faecalibaculum 0.00 2 2 S 1702221 Faecalibaculum rodentium 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1514105 Erysipelothrix larvae 0.00 1 0 G 1918536 Longicatena 0.00 1 1 S 1796635 Longicatena caecimuris 0.02 32 0 F 2810280 Coprobacillaceae 0.02 32 15 G 135858 Catenibacterium 0.01 15 0 G1 2643636 unclassified Catenibacterium 0.01 15 15 S 2478954 Catenibacterium sp. co_0103 0.00 2 2 S 100886 Catenibacterium mitsuokai 0.01 10 0 F 2810281 Turicibacteraceae 0.01 10 10 G 191303 Turicibacter 0.00 2 0 C 3086086 Dethiobacteria 0.00 2 0 O 3086087 Dethiobacterales 0.00 2 0 F 3086088 Dethiobacteraceae 0.00 2 0 G 338648 Candidatus Contubernalis 0.00 2 2 S 338645 Candidatus Contubernalis alkalaceticus 0.00 1 0 P1 33974 Bacillota sensu stricto incertae sedis 0.00 1 0 G 1930845 Ndongobacter 0.00 1 1 S 1871025 Ndongobacter massiliensis 0.00 1 0 P1 2840488 Bacillota incertae sedis 0.00 1 0 O 3071001 Caldicellulosiruptorales 0.00 1 0 F 3071002 Caldicellulosiruptoraceae 0.00 1 0 G 44000 Caldicellulosiruptor 0.00 1 1 S 29324 Caldicellulosiruptor naganoensis 11.05 14809 5 P 201174 Actinomycetota 10.67 14293 129 C 1760 Actinomycetes 6.93 9281 22 O 85009 Propionibacteriales 6.82 9134 345 F 31957 Propionibacteriaceae 6.37 8539 104 G 1912216 Cutibacterium 5.87 7860 7844 S 1747 Cutibacterium acnes 0.01 14 12 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 2 2 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.00 2 2 S1 1122995 Cutibacterium acnes DSM 1897 0.42 563 563 S 33011 Cutibacterium granulosum 0.01 7 7 S 33010 Cutibacterium avidum 0.00 5 5 S 2559073 Cutibacterium modestum 0.09 119 9 G 2801844 Arachnia 0.08 109 109 S 1750 Arachnia propionica 0.00 1 1 S 1547448 Arachnia rubra 0.04 47 2 G 72763 Tessaracoccus 0.03 38 38 S 1285901 Tessaracoccus defluvii 0.01 7 7 S 2161816 Tessaracoccus timonensis 0.02 30 19 G 29404 Microlunatus 0.00 6 0 G1 2619695 unclassified Microlunatus 0.00 6 6 S 2672569 Microlunatus sp. Gsoil 973 0.00 4 4 S 630515 Microlunatus soli 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.02 30 0 G 1912215 Acidipropionibacterium 0.02 27 27 S 1749 Acidipropionibacterium jensenii 0.00 2 2 S 2057246 Acidipropionibacterium virtanenii 0.00 1 1 S 1748 Acidipropionibacterium acidipropionici 0.01 9 6 G 1911549 Raineyella 0.00 3 3 S 2662261 Raineyella fluvialis 0.01 7 0 G 1743 Propionibacterium 0.00 4 4 S 1744 Propionibacterium freudenreichii 0.00 3 3 S 556499 Propionibacterium acidifaciens 0.01 7 0 G 369926 Brooklawnia 0.01 7 7 S 3041175 Brooklawnia propionicigenes 0.00 1 0 G 2919589 Vaginimicrobium 0.00 1 1 S 1871034 Vaginimicrobium propionicum 0.09 118 1 F 85015 Nocardioidaceae 0.09 114 15 G 1839 Nocardioides 0.04 56 56 S 1774216 Nocardioides rotundus 0.02 23 0 G1 2615069 unclassified Nocardioides 0.02 22 22 S 2763008 Nocardioides sp. zg-1228 0.00 1 1 S 2931390 Nocardioides sp. W7 0.01 17 17 S 642780 Nocardioides scoriae 0.00 1 1 S 3095075 Nocardioides renjunii 0.00 1 1 S 160826 Nocardioides aquaticus 0.00 1 1 S 1643322 Nocardioides ungokensis 0.00 2 0 G 3024237 Solicola 0.00 2 2 S 2908642 Solicola gregarius 0.00 1 1 G 2040 Aeromicrobium 0.01 7 0 F 2726069 Kribbellaceae 0.01 7 0 G 182639 Kribbella 0.01 7 1 G1 2644121 unclassified Kribbella 0.00 6 6 S 2975966 Kribbella sp. NBC_00359 1.65 2214 10 O 85007 Mycobacteriales 1.57 2102 0 F 1653 Corynebacteriaceae 1.57 2102 1167 G 1716 Corynebacterium 0.14 192 192 S 38284 Corynebacterium accolens 0.12 162 159 S 38289 Corynebacterium jeikeium 0.00 3 3 S1 306537 Corynebacterium jeikeium K411 0.06 77 77 S 61592 Corynebacterium durum 0.04 51 51 S 43768 Corynebacterium matruchotii 0.04 47 47 S 1758466 Corynebacterium faecale 0.03 39 39 S 161895 Corynebacterium phocae 0.03 37 0 S 575200 Corynebacterium maris 0.03 37 37 S1 1224163 Corynebacterium maris DSM 45190 0.02 33 33 S 679663 Corynebacterium canis 0.02 32 32 S 35757 Corynebacterium cystitidis 0.02 29 29 S 108486 Corynebacterium falsenii 0.02 27 27 S 2080740 Corynebacterium yudongzhengii 0.02 26 0 S 38288 Corynebacterium genitalium 0.02 26 26 S1 585529 Corynebacterium genitalium ATCC 33030 0.02 24 24 S 53374 Corynebacterium coyleae 0.02 23 0 G1 2624378 unclassified Corynebacterium 0.01 11 11 S 1487956 Corynebacterium sp. ATCC 6931 0.01 10 10 S 2599641 Corynebacterium sp. sy039 0.00 2 2 S 3062461 Corynebacterium sp. BD556 0.01 18 18 S 1719 Corynebacterium pseudotuberculosis 0.01 18 18 S 43765 Corynebacterium amycolatum 0.01 17 17 S 2055947 Corynebacterium heidelbergense 0.01 17 0 S 441501 Corynebacterium massiliense 0.01 17 17 S1 1121364 Corynebacterium massiliense DSM 45435 0.01 9 0 S 234828 Corynebacterium caspium 0.01 9 9 S1 1121355 Corynebacterium caspium DSM 44850 0.01 7 7 S 3049799 Corynebacterium breve 0.01 7 0 S 1718 Corynebacterium glutamicum 0.01 7 7 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 6 6 S 65058 Corynebacterium ulcerans 0.00 5 5 S 2709394 Corynebacterium lizhenjunii 0.00 3 3 S 571915 Corynebacterium mustelae 0.00 3 3 S 39791 Corynebacterium glucuronolyticum 0.00 3 3 S 169292 Corynebacterium aurimucosum 0.00 2 2 S 156978 Corynebacterium imitans 0.00 2 2 S 2709392 Corynebacterium qintianiae 0.00 2 2 S 131318 Corynebacterium felinum 0.00 2 2 S 2768834 Corynebacterium zhongnanshanii 0.00 2 0 S 89154 Corynebacterium terpenotabidum 0.00 2 2 S1 1200352 Corynebacterium terpenotabidum Y-11 0.00 1 1 S 556548 Corynebacterium freiburgense 0.00 1 0 S 1717 Corynebacterium diphtheriae 0.00 1 1 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.00 1 1 S 1737425 Corynebacterium provencense 0.00 1 0 S 1721 Corynebacterium callunae 0.00 1 1 S1 1121353 Corynebacterium callunae DSM 20147 0.00 1 1 S 1072256 Corynebacterium uterequi 0.00 1 1 S 2506452 Corynebacterium suranareeae 0.00 1 1 S 71254 Corynebacterium confusum 0.00 1 0 S 1230998 Corynebacterium frankenforstense 0.00 1 1 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.00 1 0 S 203263 Corynebacterium aquilae 0.00 1 1 S1 1431546 Corynebacterium aquilae DSM 44791 0.00 1 1 S 38290 Corynebacterium macginleyi 0.00 1 1 S 43771 Corynebacterium urealyticum 0.00 1 1 S 2675219 Corynebacterium occultum 0.00 1 1 S 38304 Corynebacterium tuberculostearicum 0.02 30 0 F 85025 Nocardiaceae 0.02 24 10 G 1827 Rhodococcus 0.01 9 9 S 1828 Rhodococcus fascians 0.00 3 0 G1 2840174 Rhodococcus erythropolis group 0.00 3 3 S 334542 Rhodococcus qingshengii 0.00 1 1 S 37919 Rhodococcus opacus 0.00 1 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2499145 Rhodococcus sp. X156 0.00 6 0 G 1817 Nocardia 0.00 2 2 S 37332 Nocardia seriolae 0.00 2 2 S 455432 Nocardia terpenica 0.00 1 1 S 37326 Nocardia brasiliensis 0.00 1 1 S 2755382 Nocardia huaxiensis 0.02 26 1 F 1762 Mycobacteriaceae 0.01 16 11 G 1763 Mycobacterium 0.00 5 0 G1 77643 Mycobacterium tuberculosis complex 0.00 5 5 S 1773 Mycobacterium tuberculosis 0.01 8 6 G 1866885 Mycolicibacterium 0.00 2 0 G1 2636767 unclassified Mycolicibacterium 0.00 2 2 S 3064284 Mycolicibacterium sp. MU0050 0.00 1 1 G 2126281 Mycolicibacillus 0.02 23 0 F 85026 Gordoniaceae 0.02 23 21 G 2053 Gordonia 0.00 1 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2742602 Gordonia sp. X0973 0.00 1 1 S 84595 Gordonia polyisoprenivorans 0.01 15 0 F 85029 Dietziaceae 0.01 15 0 G 37914 Dietzia 0.01 13 13 S 139021 Dietzia psychralcaliphila 0.00 2 2 S 499555 Dietzia timorensis 0.00 4 0 F 85028 Tsukamurellaceae 0.00 4 4 G 2060 Tsukamurella 0.00 3 0 F 2805586 Lawsonellaceae 0.00 3 0 G 1847725 Lawsonella 0.00 3 3 S 1528099 Lawsonella clevelandensis 0.00 1 0 F 316606 Segniliparaceae 0.00 1 0 G 286801 Segniliparus 0.00 1 0 S 286802 Segniliparus rotundus 0.00 1 1 S1 640132 Segniliparus rotundus DSM 44985 1.20 1613 42 O 85006 Micrococcales 0.66 883 20 F 1268 Micrococcaceae 0.51 685 29 G 32207 Rothia 0.34 453 446 S 43675 Rothia mucilaginosa 0.01 7 7 S1 680646 Rothia mucilaginosa DY-18 0.12 156 156 S 2047 Rothia dentocariosa 0.03 39 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.03 39 39 S 3047030 Rothia sp. SD9660Na 0.00 6 6 S 172042 Rothia aeria 0.00 2 2 S 169480 Rothia amarae 0.05 67 12 G 57493 Kocuria 0.04 54 54 S 71999 Kocuria palustris 0.00 1 1 S 1275 Kocuria rosea 0.04 58 0 G 1742989 Glutamicibacter 0.04 47 0 G1 2627139 unclassified Glutamicibacter 0.04 47 47 S 1155384 Glutamicibacter sp. ZJUTW 0.01 11 11 S 37929 Glutamicibacter nicotianae 0.03 34 34 G 1269 Micrococcus 0.01 9 2 G 1663 Arthrobacter 0.00 5 0 G1 235627 unclassified Arthrobacter 0.00 2 2 S 2879617 Arthrobacter sp. FW305-BF8 0.00 2 2 S 2828862 Arthrobacter sp. Helios 0.00 1 1 S 2991715 Arthrobacter sp. ATA002 0.00 2 2 S 2486855 Arthrobacter sulfonylureivorans 0.00 5 0 G 1742993 Pseudarthrobacter 0.00 5 0 G1 2647000 unclassified Pseudarthrobacter 0.00 4 4 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 1 S 2851598 Pseudarthrobacter sp. L1SW 0.00 2 2 G 1160973 Auritidibacter 0.00 1 0 G 169133 Citricoccus 0.00 1 0 G1 2632435 unclassified Citricoccus 0.00 1 1 S 2567881 Citricoccus sp. SGAir0253 0.00 1 0 G 1742990 Paeniglutamicibacter 0.00 1 0 G1 2639426 unclassified Paeniglutamicibacter 0.00 1 1 S 2853258 Paeniglutamicibacter sp. Y32M11 0.00 1 0 G 1742991 Pseudoglutamicibacter 0.00 1 1 S 98671 Pseudoglutamicibacter albus 0.18 238 1 F 85019 Brevibacteriaceae 0.18 235 32 G 1696 Brevibacterium 0.14 193 0 G1 2614124 unclassified Brevibacterium 0.07 99 99 S 2777556 Brevibacterium sp. SMBL_HHYL_HB1 0.07 89 89 S 2575923 Brevibacterium sp. CS2 0.00 5 5 S 2999062 Brevibacterium sp. BRM-1 0.00 5 5 S 2697563 Brevibacterium atlanticum 0.00 3 3 S 33889 Brevibacterium casei 0.00 1 1 S 358099 Brevibacterium oceani 0.00 1 1 S 1496080 Brevibacterium pigmentatum 0.00 2 0 G 3162691 Saxibacter 0.00 2 2 S 2909229 Saxibacter everestensis 0.15 198 110 F 85023 Microbacteriaceae 0.02 31 24 G 33882 Microbacterium 0.00 3 0 G1 2609290 unclassified Microbacterium 0.00 2 2 S 2962064 Microbacterium sp. M28 0.00 1 1 S 2981139 Microbacterium sp. AB 0.00 1 1 S 3079935 Microbacterium limosum 0.00 1 1 S 683047 Microbacterium suwonense 0.00 1 1 S 2509458 Microbacterium protaetiae 0.00 1 1 S 162426 Microbacterium hominis 0.02 27 9 G 55968 Leucobacter 0.01 15 15 S 2873270 Leucobacter tenebrionis 0.00 3 0 G1 2621730 unclassified Leucobacter 0.00 3 3 S 2813744 Leucobacter sp. CX169 0.01 8 0 F1 1655488 Luna cluster 0.01 8 1 F2 1655489 Luna-1 subcluster 0.00 5 0 G 529881 Aquiluna 0.00 5 4 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 2 1 G 529883 Rhodoluna 0.00 1 1 S 535712 Candidatus Rhodoluna planktonica 0.01 7 4 G 33877 Agromyces 0.00 2 2 S 1858653 Agromyces mangrovi 0.00 1 1 S 2080742 Agromyces badenianii 0.00 4 0 G 3108736 Antiquaquibacter 0.00 4 4 S 2880260 Antiquaquibacter oligotrophicus 0.00 3 0 G 2034 Curtobacterium 0.00 3 0 G1 257496 unclassified Curtobacterium 0.00 2 2 S 2862880 Curtobacterium sp. TC1 0.00 1 1 S 2175655 Curtobacterium sp. MCPF17_052 0.00 3 0 G 1433997 Diaminobutyricimonas 0.00 3 0 G1 2643261 unclassified Diaminobutyricimonas 0.00 3 3 S 2683590 Diaminobutyricimonas sp. LJ205 0.00 1 1 G 33886 Rathayibacter 0.00 1 1 G 46352 Agrococcus 0.00 1 0 G 1573 Clavibacter 0.00 1 1 S 1874630 Clavibacter capsici 0.00 1 0 G 1434022 Naasia 0.00 1 1 S 1162966 Naasia aerilata 0.00 1 0 G 255204 Pseudoclavibacter 0.00 1 0 G1 2615177 unclassified Pseudoclavibacter 0.00 1 1 S 2866588 Pseudoclavibacter sp. Marseille-Q3772 0.09 126 0 F 2805591 Tropherymataceae 0.09 126 0 G 2038 Tropheryma 0.09 126 126 S 2039 Tropheryma whipplei 0.05 63 2 F 85020 Dermabacteraceae 0.03 40 0 G 1161125 Helcobacillus 0.03 40 40 S 521392 Helcobacillus massiliensis 0.02 21 20 G 43668 Brachybacterium 0.00 1 0 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 1903186 Brachybacterium sp. P6-10-X1 0.03 40 0 F 85016 Cellulomonadaceae 0.03 38 0 G 1707 Cellulomonas 0.03 38 0 G1 2620175 unclassified Cellulomonas 0.03 38 38 S 2591145 Cellulomonas sp. Y8 0.00 1 0 G 665568 Paraoerskovia 0.00 1 1 S 1138587 Paraoerskovia sediminicola 0.00 1 0 G 1926259 Pseudactinotalea 0.00 1 0 G1 2649176 unclassified Pseudactinotalea 0.00 1 1 S 2654547 Pseudactinotalea sp. HY158 0.01 12 0 F 2805590 Ornithinimicrobiaceae 0.01 12 2 G 125287 Ornithinimicrobium 0.01 10 10 S 1288636 Ornithinimicrobium flavum 0.01 9 0 F 145357 Dermacoccaceae 0.01 7 4 G 57495 Dermacoccus 0.00 3 0 G1 2643059 unclassified Dermacoccus 0.00 3 3 S 2762331 Dermacoccus sp. PAMC28757 0.00 2 0 G 908935 Yimella 0.00 2 0 G1 2649892 unclassified Yimella 0.00 2 2 S 2770551 Yimella sp. cx-51 0.00 1 0 F 125316 Beutenbergiaceae 0.00 1 0 G 947525 Miniimonas 0.00 1 0 G1 2626367 unclassified Miniimonas 0.00 1 1 S 2171623 Miniimonas sp. S16 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 0 G 154116 Georgenia 0.00 1 0 G1 2626815 unclassified Georgenia 0.00 1 1 S 2917725 Georgenia sp. TF02-10 0.45 600 0 O 2037 Actinomycetales 0.45 600 26 F 2049 Actinomycetaceae 0.25 331 202 G 2529408 Schaalia 0.08 113 113 S 1660 Schaalia odontolytica 0.01 8 8 S 131110 Schaalia radingae 0.00 4 0 G1 2691889 unclassified Schaalia 0.00 4 4 S 2709403 Schaalia sp. ZJ405 0.00 3 3 S 131111 Schaalia turicensis 0.00 1 1 S 52773 Schaalia meyeri 0.17 222 162 G 1654 Actinomyces 0.02 31 13 G1 2609248 unclassified Actinomyces 0.01 17 17 S 712122 Actinomyces sp. oral taxon 414 0.00 1 1 S 2708340 Actinomyces sp. zg-332 0.01 13 13 S 544580 Actinomyces oris 0.00 5 5 S 1288391 Actinomyces timonensis 0.00 4 4 S 675090 Actinomyces weissii 0.00 3 3 S 1852377 Actinomyces pacaensis 0.00 2 2 S 52771 Actinomyces howellii 0.00 1 1 S 1960083 Actinomyces gaoshouyii 0.00 1 1 S 2560010 Actinomyces procaprae 0.01 10 0 G 2912996 Changpingibacter 0.01 10 10 S 2758440 Changpingibacter yushuensis 0.00 5 0 G 2740557 Pauljensenia 0.00 5 5 S 178339 Pauljensenia hongkongensis 0.00 2 0 G 28263 Arcanobacterium 0.00 2 2 S 999183 Arcanobacterium canis 0.00 1 0 G 184869 Varibaculum 0.00 1 1 S 2811781 Varibaculum prostatecancerukia 0.00 1 1 G 1069494 Trueperella 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 66228 Gleimia europaea 0.00 1 0 G 2692118 Winkia 0.00 1 1 S 33007 Winkia neuii 0.22 296 0 O 85004 Bifidobacteriales 0.22 296 4 F 31953 Bifidobacteriaceae 0.22 290 193 G 1678 Bifidobacterium 0.05 66 41 S 216816 Bifidobacterium longum 0.01 15 15 S1 1682 Bifidobacterium longum subsp. infantis 0.01 8 8 S1 1679 Bifidobacterium longum subsp. longum 0.00 2 2 S1 1931217 Bifidobacterium longum subsp. suillum 0.01 8 8 S 1689 Bifidobacterium dentium 0.01 7 0 G1 2608897 unclassified Bifidobacterium 0.01 7 7 S 2983233 Bifidobacterium sp. ESL0790 0.00 3 1 S 1694 Bifidobacterium pseudolongum 0.00 2 2 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.00 3 3 S 28026 Bifidobacterium pseudocatenulatum 0.00 2 2 S 1683 Bifidobacterium angulatum 0.00 2 2 S 1686 Bifidobacterium catenulatum 0.00 2 2 S 33905 Bifidobacterium thermophilum 0.00 2 2 S 1454229 Bifidobacterium faecale 0.00 1 0 S 28025 Bifidobacterium animalis 0.00 1 0 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 1 1 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 1 0 S 638619 Bifidobacterium actinocoloniiforme 0.00 1 1 S1 1437605 Bifidobacterium actinocoloniiforme DSM 22766 0.00 2 0 G 196081 Scardovia 0.00 2 0 S 78259 Scardovia inopinata 0.00 2 2 S1 1150468 Scardovia inopinata JCM 12537 0.06 83 0 O 85011 Kitasatosporales 0.06 83 1 F 2062 Streptomycetaceae 0.06 79 6 G 1883 Streptomyces 0.03 36 1 G1 2593676 unclassified Streptomyces 0.01 18 18 S 2903645 Streptomyces sp. NBC_00310 0.00 4 4 S 2099584 Streptomyces sp. ICC4 0.00 3 3 S 3075198 Streptomyces sp. ITFR-16 0.00 2 2 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2781734 Streptomyces sp. A2-16 0.00 1 1 S 2136173 Streptomyces sp. So13.3 0.00 1 1 S 2975930 Streptomyces sp. NBC_01754 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 2903787 Streptomyces sp. NBC_01233 0.00 1 1 S 2903881 Streptomyces sp. NBC_01476 0.00 1 1 S 2975730 Streptomyces sp. NBC_00376 0.01 9 0 G1 1477431 Streptomyces albidoflavus group 0.01 9 9 S 1886 Streptomyces albidoflavus 0.01 7 7 S 35621 Streptomyces mobaraensis 0.00 6 6 S 2867410 Streptomyces profundus 0.00 4 4 S 2508722 Streptomyces roseicoloratus 0.00 3 3 S 887464 Streptomyces laculatispora 0.00 3 3 S 1048205 Streptomyces uncialis 0.00 1 1 S 66425 Streptomyces luteoverticillatus 0.00 1 1 S 83656 Streptomyces tsukubensis 0.00 1 1 S 1077946 Streptomyces hundungensis 0.00 1 1 S 1890 Streptomyces antibioticus 0.00 1 1 S 1977088 Streptomyces ficellus 0.00 2 0 G 2063 Kitasatospora 0.00 1 1 S 67352 Kitasatospora purpeofusca 0.00 1 0 G1 2633591 unclassified Kitasatospora 0.00 1 1 S 2903568 Kitasatospora sp. NBC_00458 0.00 1 0 G 2995706 Streptantibioticus 0.00 1 0 S 29303 Streptantibioticus cattleyicolor 0.00 1 1 S1 1003195 Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 0.03 38 0 O 2039638 Candidatus Nanopelagicales 0.03 38 0 F 2162846 Candidatus Nanopelagicaceae 0.02 33 30 G 2039639 Candidatus Nanopelagicus 0.00 3 3 S 1884915 Candidatus Nanopelagicus hibericus 0.00 5 1 G 622681 Candidatus Planktophila 0.00 3 3 S 1884913 Candidatus Planktophila lacus 0.00 1 1 S 573600 Candidatus Planktophila limnetica 0.01 15 0 O 85008 Micromonosporales 0.01 15 2 F 28056 Micromonosporaceae 0.00 4 0 G 168694 Salinispora 0.00 4 0 S 168695 Salinispora tropica 0.00 4 4 S1 369723 Salinispora tropica CNB-440 0.00 3 0 G 1865 Actinoplanes 0.00 2 2 S 3040509 Actinoplanes oblitus 0.00 1 0 G1 2626549 unclassified Actinoplanes 0.00 1 1 S 649831 Actinoplanes sp. N902-109 0.00 3 0 G 1873 Micromonospora 0.00 1 1 S 356851 Micromonospora chokoriensis 0.00 1 1 S 1881 Micromonospora viridifaciens 0.00 1 1 S 47865 Micromonospora inositola 0.00 1 0 G 35753 Dactylosporangium 0.00 1 1 S 47989 Dactylosporangium roseum 0.00 1 1 G 390988 Actinocatenispora 0.00 1 0 G 673534 Plantactinospora 0.00 1 0 G1 2631981 unclassified Plantactinospora 0.00 1 1 S 2108470 Plantactinospora sp. BC1 0.01 9 0 O 85010 Pseudonocardiales 0.01 9 1 F 2070 Pseudonocardiaceae 0.00 4 0 G 1835 Saccharopolyspora 0.00 4 4 S 455344 Saccharopolyspora gloriosae 0.00 2 0 G 1851 Saccharomonospora 0.00 1 0 S 1852 Saccharomonospora viridis 0.00 1 1 S1 471857 Saccharomonospora viridis DSM 43017 0.00 1 1 S 75294 Saccharomonospora xinjiangensis 0.00 1 0 G 1847 Pseudonocardia 0.00 1 0 G1 2619320 unclassified Pseudonocardia 0.00 1 1 S 2865833 Pseudonocardia sp. DSM 110487 0.00 1 0 G 1813 Amycolatopsis 0.00 1 0 G1 2618356 unclassified Amycolatopsis 0.00 1 1 S 2745196 Amycolatopsis sp. CA-230715 0.00 4 0 O 85014 Glycomycetales 0.00 4 0 F 85034 Glycomycetaceae 0.00 4 0 G 2838311 Natronoglycomyces 0.00 4 4 S 2811108 Natronoglycomyces albus 0.00 4 0 O 622450 Actinopolysporales 0.00 4 0 F 622451 Actinopolysporaceae 0.00 4 0 G 1849 Actinopolyspora 0.00 4 4 S 414996 Actinopolyspora erythraea 0.00 3 0 O 85012 Streptosporangiales 0.00 2 0 F 83676 Nocardiopsaceae 0.00 1 0 G 2013 Nocardiopsis 0.00 1 1 S 163604 Nocardiopsis exhalans 0.00 1 0 G 83677 Thermobifida 0.00 1 1 S 2021 Thermobifida fusca 0.00 1 1 F 2012 Thermomonosporaceae 0.00 2 0 O 85013 Frankiales 0.00 2 0 F 74712 Frankiaceae 0.00 2 0 G 1854 Frankia 0.00 1 0 S 1859 Frankia alni 0.00 1 1 S1 326424 Frankia alni ACN14a 0.00 1 1 S 106370 Frankia casuarinae 0.00 1 0 O 1217098 Jiangellales 0.00 1 0 F 1217100 Jiangellaceae 0.00 1 1 G 281472 Jiangella 0.00 1 0 O 1643682 Geodermatophilales 0.00 1 0 F 85030 Geodermatophilaceae 0.00 1 0 G 38501 Blastococcus 0.00 1 1 S 1564165 Blastococcus brunescens 0.37 502 1 C 84998 Coriobacteriia 0.34 457 3 O 84999 Coriobacteriales 0.29 394 63 F 1643824 Atopobiaceae 0.10 130 0 G 1380 Atopobium 0.10 130 0 G1 2643817 unclassified Atopobium 0.10 130 130 S 712157 Atopobium sp. oral taxon 416 0.06 74 14 G 2767353 Lancefieldella 0.03 37 0 S 1382 Lancefieldella parvula 0.03 37 37 S1 521095 Lancefieldella parvula DSM 20469 0.02 23 0 G1 2978947 unclassified Lancefieldella 0.02 23 23 S 3022127 Lancefieldella sp. Marseille-Q7238 0.04 53 0 G 133925 Olsenella 0.02 30 0 S 133926 Olsenella uli 0.02 30 30 S1 633147 Olsenella uli DSM 7084 0.02 23 0 G1 2638792 unclassified Olsenella 0.02 23 23 S 712411 Olsenella sp. oral taxon 807 0.04 48 0 G 2847312 Parafannyhessea 0.04 48 48 S 604330 Parafannyhessea umbonata 0.02 22 5 G 2082587 Parolsenella 0.01 15 15 S 2003188 Parolsenella catena 0.00 2 2 S 1871022 Parolsenella massiliensis 0.00 3 0 G 2767327 Fannyhessea 0.00 3 3 S 82135 Fannyhessea vaginae 0.00 1 0 G 2847307 Thermophilibacter 0.00 1 1 S 1871031 Thermophilibacter mediterraneus 0.04 56 0 F 84107 Coriobacteriaceae 0.04 55 2 G 102106 Collinsella 0.04 47 47 S 74426 Collinsella aerofaciens 0.00 5 5 S 147206 Collinsella stercoris 0.00 1 0 G1 2637548 unclassified Collinsella 0.00 1 1 S 2844380 Collinsella sp. zg1085 0.00 1 0 G 1472762 Enorma 0.00 1 1 S 1871019 Enorma phocaeensis 0.00 4 0 F 3153719 Kribbibacteriaceae 0.00 4 0 G 2995122 Leptogranulimonas 0.00 4 4 S 2894156 Leptogranulimonas caecicola 0.03 44 0 O 1643822 Eggerthellales 0.03 44 0 F 1643826 Eggerthellaceae 0.02 33 0 G 1926677 Raoultibacter 0.02 33 33 S 1907662 Raoultibacter timonensis 0.00 5 5 G 447020 Adlercreutzia 0.00 2 0 G 84108 Slackia 0.00 2 2 S 84110 Slackia heliotrinireducens 0.00 2 2 G 644652 Gordonibacter 0.00 2 0 G 2815775 Berryella 0.00 2 2 S 2734634 Berryella wangjianweii 0.00 4 0 C 84995 Rubrobacteria 0.00 4 0 O 84996 Rubrobacterales 0.00 4 0 F 84997 Rubrobacteraceae 0.00 4 0 G 42255 Rubrobacter 0.00 3 3 S 2653851 Rubrobacter tropicus 0.00 1 1 S 2051957 Rubrobacter indicoceani 0.00 2 1 C 908620 Nitriliruptoria 0.00 1 0 O 1747768 Egibacterales 0.00 1 0 F 1747769 Egibacteraceae 0.00 1 0 G 1747770 Egibacter 0.00 1 1 S 1670831 Egibacter rhizosphaerae 0.00 2 0 C 1497346 Thermoleophilia 0.00 2 0 O 588673 Solirubrobacterales 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 1 G 2600304 Baekduia 0.00 1 0 F 2758916 Paraconexibacteraceae 0.00 1 1 G 2758920 Paraconexibacter 0.00 1 0 C 84992 Acidimicrobiia 0.00 1 0 O 84993 Acidimicrobiales 0.00 1 0 F 84994 Acidimicrobiaceae 0.00 1 0 G 53634 Acidimicrobium 0.00 1 0 S 53635 Acidimicrobium ferrooxidans 0.00 1 1 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.61 815 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.61 815 7 P 1117 Cyanobacteriota 0.60 808 88 C 3028117 Cyanophyceae 0.37 495 2 C1 1301283 Oscillatoriophycideae 0.31 414 4 O 1150 Oscillatoriales 0.28 376 0 F 2934961 Sirenicapillariaceae 0.28 376 0 G 2596745 Limnospira 0.28 376 0 S 147322 Limnospira indica 0.28 372 372 S1 2760438 Limnospira indica BM01 0.00 4 4 S1 376219 Limnospira indica PCC 8005 0.02 30 0 F 1892252 Microcoleaceae 0.02 29 24 G 54304 Planktothrix 0.00 5 0 S 1160 Planktothrix agardhii 0.00 5 5 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.00 1 0 G 1492710 Oxynema 0.00 1 0 S 2874213 Oxynema aestuarii 0.00 1 1 S1 2064643 Oxynema aestuarii AP17 0.00 3 0 O1 1892256 Oscillatoriales incertae sedis 0.00 3 0 G 2023214 Koinonema 0.00 3 0 G1 2781947 unclassified Koinonema 0.00 3 3 S 222819 [Phormidium] sp. ETS-05 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1198 Phormidium 0.00 1 0 S 2974039 Phormidium yuhuli 0.00 1 1 S1 2940671 Phormidium yuhuli AB48 0.06 79 0 O 1118 Chroococcales 0.05 64 0 F 1890449 Microcystaceae 0.05 64 0 G 1125 Microcystis 0.05 64 0 G1 2643300 unclassified Microcystis 0.05 64 64 S 1967666 Microcystis sp. MC19 0.01 11 0 F 1890450 Aphanothecaceae 0.01 11 0 G 1453359 Candidatus Atelocyanobacterium 0.01 11 1 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 10 10 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 4 4 F 1890464 Chroococcaceae 0.09 114 0 O 1955042 Gloeomargaritales 0.09 114 0 F 1955043 Gloeomargaritaceae 0.09 114 0 G 1188227 Gloeomargarita 0.09 114 0 S 1188228 Gloeomargarita lithophora 0.09 114 114 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.04 49 0 O 1161 Nostocales 0.02 28 5 F 1892259 Aphanizomenonaceae 0.01 15 0 G 752201 Sphaerospermopsis 0.01 15 0 S 984207 Sphaerospermopsis torques-reginae 0.01 15 15 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.01 7 0 G 748770 Dolichospermum 0.01 7 0 S 136073 Dolichospermum compactum 0.01 7 7 S1 1973481 Dolichospermum compactum NIES-806 0.00 1 0 G 110103 Anabaenopsis 0.00 1 0 S 156213 Anabaenopsis elenkinii 0.00 1 1 S1 2779889 Anabaenopsis elenkinii CCIBt3563 0.01 14 8 F 1162 Nostocaceae 0.00 4 1 G 1177 Nostoc 0.00 2 0 S 264686 Nostoc edaphicum 0.00 2 2 S1 1472755 Nostoc edaphicum CCNP1411 0.00 1 0 S 224012 Nostoc piscinale 0.00 1 1 S1 224013 Nostoc piscinale CENA21 0.00 2 0 G 1163 Anabaena 0.00 2 0 S 1165 Anabaena cylindrica 0.00 2 2 S1 272123 Anabaena cylindrica PCC 7122 0.00 4 0 F 1185 Rivulariaceae 0.00 4 0 G 373984 Rivularia 0.00 4 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 4 4 S 373994 Rivularia sp. PCC 7116 0.00 2 0 F 2661849 Calotrichaceae 0.00 2 0 G 1186 Calothrix 0.00 2 0 G1 2619626 unclassified Calothrix 0.00 1 1 S 1337936 Calothrix sp. 336/3 0.00 1 1 S 2005462 Calothrix sp. NIES-3974 0.00 1 0 F 119859 Tolypothrichaceae 0.00 1 0 G 111782 Tolypothrix 0.00 1 0 G1 2649714 unclassified Tolypothrix 0.00 1 1 S 1188 Tolypothrix sp. PCC 7601 0.02 24 0 O 1890424 Synechococcales 0.02 24 0 F 1890426 Synechococcaceae 0.02 24 0 G 1129 Synechococcus 0.01 20 0 G1 2626047 unclassified Synechococcus 0.01 11 11 S 195250 Synechococcus sp. PCC 7336 0.01 9 9 S 321327 Synechococcus sp. JA-3-3Ab 0.00 4 3 S 32046 Synechococcus elongatus 0.00 1 1 S1 3115655 Synechococcus elongatus IITB5 0.02 22 20 O 307595 Gloeobacterales 0.00 2 0 F 1890422 Gloeobacteraceae 0.00 2 2 G 33071 Gloeobacter 0.00 4 0 O 3079757 Gomontiellales 0.00 4 0 F 1890431 Chamaesiphonaceae 0.00 4 0 G 217161 Chamaesiphon 0.00 4 0 S 1173032 Chamaesiphon minutus 0.00 4 4 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 3 0 O 2881377 Pseudanabaenales 0.00 3 0 F 1890436 Pseudanabaenaceae 0.00 3 0 G 1152 Pseudanabaena 0.00 3 0 G1 2593292 unclassified Pseudanabaena 0.00 3 3 S 82654 Pseudanabaena sp. PCC 7367 0.00 3 0 O 3039985 Nodosilineales 0.00 3 0 F 3039986 Nodosilineaceae 0.00 3 0 G 170610 Halomicronema 0.00 3 0 S 1209493 Halomicronema hongdechloris 0.00 3 3 S1 1641165 Halomicronema hongdechloris C2206 0.00 2 0 O 1890505 Chroococcidiopsidales 0.00 2 0 F 1890528 Chroococcidiopsidaceae 0.00 2 2 G 54298 Chroococcidiopsis 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 1 G 155977 Acaryochloris 0.00 1 0 O 3079748 Oculatellales 0.00 1 0 F 2303507 Oculatellaceae 0.00 1 0 G 3065395 Thermocoleostomius 0.00 1 0 S 3065396 Thermocoleostomius sinensis 0.00 1 1 S1 2016057 Thermocoleostomius sinensis A174 0.27 356 98 P 544448 Mycoplasmatota 0.15 197 132 C 31969 Mollicutes 0.04 47 0 O 2085 Mycoplasmatales 0.03 40 0 F 2092 Mycoplasmataceae 0.03 40 1 G 2093 Mycoplasma 0.02 31 0 G1 2683645 unclassified Mycoplasma 0.01 17 17 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.01 7 7 S 2801918 Mycoplasma sp. E35C 0.01 7 7 S 2967302 Mycoplasma sp. 1018B 0.01 8 0 G1 656088 Mycoplasma mycoides group 0.00 5 5 S 1179777 Mycoplasma feriruminatoris 0.00 3 0 S 2095 Mycoplasma capricolum 0.00 3 3 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 6 0 O1 1665628 unclassified Mycoplasmatales 0.00 6 6 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 1 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 1 0 G 295595 Candidatus Hepatoplasma 0.00 1 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 1 1 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.01 10 0 O 186329 Acholeplasmatales 0.01 10 0 F 2146 Acholeplasmataceae 0.01 7 0 G 2147 Acholeplasma 0.01 7 7 S 2148 Acholeplasma laidlawii 0.00 2 2 G 33926 Candidatus Phytoplasma 0.00 1 0 G 2903107 Paracholeplasma 0.00 1 1 S 61635 Paracholeplasma brassicae 0.01 8 0 O 186328 Entomoplasmatales 0.01 8 0 F 2131 Spiroplasmataceae 0.01 8 4 G 2132 Spiroplasma 0.00 2 1 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3066313 Spiroplasma endosymbiont of Zeiraphera isertana 0.00 1 1 S 2141 Spiroplasma ixodetis 0.00 1 0 S 301585 Spiroplasma platyhelix 0.00 1 1 S1 1276218 Spiroplasma platyhelix PALS-1 0.04 58 0 O 2790996 Mycoplasmoidales 0.03 36 0 F 2895623 Metamycoplasmataceae 0.03 34 6 G 2767358 Mycoplasmopsis 0.02 25 25 S 55603 Mycoplasmopsis caviae 0.00 2 2 S 2113 Mycoplasmopsis californica 0.00 1 1 S 33923 Mycoplasmopsis felis 0.00 2 1 G 2923352 Mesomycoplasma 0.00 1 0 S 2118 [Mycoplasma] mobile 0.00 1 1 S1 267748 Mycoplasma mobile 163K 0.02 22 1 F 2790998 Mycoplasmoidaceae 0.01 17 0 G 2791001 Malacoplasma 0.01 11 0 S 28227 Malacoplasma penetrans 0.01 11 11 S1 272633 Malacoplasma penetrans HF-2 0.00 6 6 S 2116 Malacoplasma iowae 0.00 2 2 G 2129 Ureaplasma 0.00 2 2 G 2995234 Mycoplasmoides 0.00 3 0 C 1912503 Candidatus Izimaplasma 0.00 3 0 O 2975519 Candidatus Izemoplasmatales 0.00 3 0 F 2975520 Candidatus Izemoplasmataceae 0.00 3 0 G 2975521 Candidatus Xianfuyuplasma 0.00 3 3 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.19 258 0 P 67819 Armatimonadota 0.19 251 0 C 1077257 Chthonomonadia 0.19 251 0 O 1077263 Chthonomonadales 0.19 251 0 F 1077264 Chthonomonadaceae 0.19 251 0 G 1077265 Chthonomonas 0.19 251 0 S 454171 Chthonomonas calidirosea 0.19 251 251 S1 1303518 Chthonomonas calidirosea T49 0.01 7 0 C 1663419 Fimbriimonadia 0.01 7 0 O 1663425 Fimbriimonadales 0.01 7 0 F 1663426 Fimbriimonadaceae 0.01 7 0 G 1005038 Fimbriimonas 0.01 7 0 S 1005039 Fimbriimonas ginsengisoli 0.01 7 7 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.08 108 0 P 200795 Chloroflexota 0.04 56 0 C 388447 Ktedonobacteria 0.04 56 0 O 388448 Ktedonobacterales 0.04 56 0 F 2692416 Ktedonosporobacteraceae 0.04 56 0 G 2692417 Ktedonosporobacter 0.04 56 56 S 2509675 Ktedonosporobacter rubrisoli 0.03 34 1 C 32061 Chloroflexia 0.02 24 1 O 32064 Chloroflexales 0.01 17 0 O1 1508595 Roseiflexineae 0.01 17 0 F 1508635 Roseiflexaceae 0.01 17 11 G 120961 Roseiflexus 0.00 4 0 S 120962 Roseiflexus castenholzii 0.00 4 4 S1 383372 Roseiflexus castenholzii DSM 13941 0.00 2 0 G1 2609473 unclassified Roseiflexus 0.00 2 2 S 357808 Roseiflexus sp. RS-1 0.00 6 0 O1 1508594 Chloroflexineae 0.00 6 0 F 1106 Chloroflexaceae 0.00 6 2 G 1107 Chloroflexus 0.00 4 0 S 152260 Chloroflexus aggregans 0.00 4 4 S1 326427 Chloroflexus aggregans DSM 9485 0.01 9 0 O 3139175 Candidatus Chloroheliales 0.01 9 0 F 3139177 Candidatus Chloroheliaceae 0.01 9 0 G 3139173 Candidatus Chlorohelix 0.01 9 9 S 3003348 Candidatus Chlorohelix allophototropha 0.01 8 0 C 292625 Anaerolineae 0.01 8 0 O 292629 Anaerolineales 0.01 8 2 F 292628 Anaerolineaceae 0.00 3 0 G 233189 Anaerolinea 0.00 3 0 S 167964 Anaerolinea thermophila 0.00 3 3 S1 926569 Anaerolinea thermophila UNI-1 0.00 3 0 G 1649478 Pelolinea 0.00 3 3 S 913107 Pelolinea submarina 0.00 5 0 C 301297 Dehalococcoidia 0.00 4 0 O 1202465 Dehalococcoidales 0.00 4 0 F 1202464 Dehalococcoidaceae 0.00 2 2 G 61434 Dehalococcoides 0.00 2 0 G 670486 Dehalogenimonas 0.00 2 2 G1 2638108 unclassified Dehalogenimonas 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 4 0 C 1382928 Ardenticatenia 0.00 4 0 O 3085098 Candidatus Promineifilales 0.00 4 0 F 3085097 Candidatus Promineifilaceae 0.00 4 0 G 1988031 Candidatus Promineifilum 0.00 4 4 S 1806508 Candidatus Promineifilum breve 0.00 1 0 C 1495646 Thermoflexia 0.00 1 0 O 1495647 Thermoflexales 0.00 1 0 F 1495648 Thermoflexaceae 0.00 1 0 G 1495649 Thermoflexus 0.00 1 1 S 1495650 Thermoflexus hugenholtzii 0.04 53 0 P 1297 Deinococcota 0.04 53 6 C 188787 Deinococci 0.03 46 0 O 118964 Deinococcales 0.03 46 0 F 183710 Deinococcaceae 0.03 46 4 G 1298 Deinococcus 0.02 28 0 S 68909 Deinococcus geothermalis 0.02 28 28 S1 319795 Deinococcus geothermalis DSM 11300 0.01 8 8 S 317577 Deinococcus ficus 0.00 3 0 S 432329 Deinococcus peraridilitoris 0.00 3 3 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 1 0 G1 2623546 unclassified Deinococcus 0.00 1 1 S 2917691 Deinococcus sp. KNUC1210 0.00 1 0 S 309887 Deinococcus maricopensis 0.00 1 1 S1 709986 Deinococcus maricopensis DSM 21211 0.00 1 1 S 1889240 Deinococcus rubellus 0.00 1 0 O 68933 Thermales 0.00 1 0 F 188786 Thermaceae 0.00 1 0 G 270 Thermus 0.00 1 1 S 56956 Thermus brockianus 0.00 1 0 P 1154676 Vulcanimicrobiota 0.00 1 0 C 2829293 Vulcanimicrobiia 0.00 1 0 O 2599632 Vulcanimicrobiales 0.00 1 0 F 2829291 Vulcanimicrobiaceae 0.00 1 0 G 3016049 Vulcanimicrobium 0.00 1 1 S 3016050 Vulcanimicrobium alpinum 2.08 2785 0 D1 1783270 FCB group 2.05 2752 2 D2 68336 Bacteroidota/Chlorobiota group 2.04 2736 8 P 976 Bacteroidota 1.42 1905 2 C 200643 Bacteroidia 1.39 1856 4 O 171549 Bacteroidales 1.22 1637 31 F 171552 Prevotellaceae 0.61 819 81 G 2974251 Segatella 0.51 678 581 S 165179 Segatella copri 0.07 97 97 S1 537011 Segatella copri DSM 18205 0.04 56 56 S 2518605 Segatella hominis 0.00 4 4 S 28135 Segatella oris 0.51 679 86 G 838 Prevotella 0.18 239 0 G1 2638335 unclassified Prevotella 0.16 209 0 S 652716 Prevotella sp. oral taxon 299 0.16 209 209 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.01 11 11 S 712471 Prevotella sp. oral taxon 475 0.01 11 11 S 2937774 Prevotella sp. E15-22 0.01 8 8 S 2691580 Prevotella sp. Rep29 0.08 112 112 S 28132 Prevotella melaninogenica 0.07 93 93 S 28133 Prevotella nigrescens 0.02 33 33 S 28129 Prevotella denticola 0.02 32 32 S 28131 Prevotella intermedia 0.02 28 0 S 52227 Prevotella dentalis 0.02 28 28 S1 908937 Prevotella dentalis DSM 3688 0.01 20 20 S 470565 Prevotella histicola 0.01 16 16 S 2801997 Prevotella herbatica 0.01 12 0 S 589436 Prevotella fusca 0.01 12 12 S1 1236517 Prevotella fusca JCM 17724 0.00 4 4 S 28125 Prevotella bivia 0.00 3 3 S 28128 Prevotella corporis 0.00 1 1 S 1177574 Prevotella jejuni 0.07 95 0 G 2974257 Hoylesella 0.07 95 95 S 28127 Hoylesella buccalis 0.01 10 0 G 2884814 Pseudoprevotella 0.01 10 10 S 2133944 Pseudoprevotella muciniphila 0.00 3 3 G 577309 Paraprevotella 0.12 157 0 F 171551 Porphyromonadaceae 0.12 156 0 G 836 Porphyromonas 0.08 109 0 G1 2645799 unclassified Porphyromonas 0.08 109 109 S 712435 Porphyromonas sp. oral taxon 275 0.03 44 44 S 322095 Porphyromonas somerae 0.00 3 3 S 28124 Porphyromonas endodontalis 0.00 1 0 G 1159323 Macellibacteroides 0.00 1 0 G1 1243006 environmental samples 0.00 1 1 S 1243007 uncultured Macellibacteroides sp. 0.02 26 0 F 815 Bacteroidaceae 0.02 26 1 G 816 Bacteroides 0.01 15 15 S 817 Bacteroides fragilis 0.01 7 0 G1 2646097 unclassified Bacteroides 0.01 7 7 S 2847299 Bacteroides sp. DH3716P 0.00 3 3 S 818 Bacteroides thetaiotaomicron 0.01 9 0 F 2005519 Barnesiellaceae 0.01 9 9 G 397864 Barnesiella 0.01 9 0 F 2005525 Tannerellaceae 0.01 7 0 G 195950 Tannerella 0.01 7 7 S 712710 Tannerella serpentiformis 0.00 2 0 G 375288 Parabacteroides 0.00 1 1 S 823 Parabacteroides distasonis 0.00 1 1 S 46503 Parabacteroides merdae 0.00 6 0 F 2760872 Tenuifilaceae 0.00 6 0 G 2760873 Tenuifilum 0.00 6 6 S 2590900 Tenuifilum thalassicum 0.00 4 0 F 171550 Rikenellaceae 0.00 4 0 G 1647173 Acetobacteroides 0.00 4 0 G1 1760810 environmental samples 0.00 4 4 S 1760811 uncultured Acetobacteroides sp. 0.00 2 0 F 2005523 Paludibacteraceae 0.00 2 0 G 346096 Paludibacter 0.00 2 0 S 185300 Paludibacter propionicigenes 0.00 2 2 S1 694427 Paludibacter propionicigenes WB4 0.00 1 0 O1 333046 Bacteroidales incertae sedis 0.00 1 0 G 511434 Candidatus Azobacteroides 0.00 1 0 S 511435 Candidatus Azobacteroides pseudotrichonymphae 0.00 1 1 S1 511995 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 0.00 1 0 F 1853231 Odoribacteraceae 0.00 1 1 G 574697 Butyricimonas 0.04 47 0 O 1970189 Marinilabiliales 0.03 37 31 F 1471398 Prolixibacteraceae 0.00 6 0 G 2792393 Aquipluma 0.00 6 6 S 2010828 Aquipluma nitroreducens 0.00 5 1 F 558415 Marinilabiliaceae 0.00 4 0 G 1193324 Alkalitalea 0.00 4 4 S 889453 Alkalitalea saponilacus 0.00 5 3 F 1573805 Marinifilaceae 0.00 2 0 G 866673 Marinifilum 0.00 2 0 G1 866674 environmental samples 0.00 2 2 S 1127472 uncultured Marinifilum sp. 0.30 403 0 C 117743 Flavobacteriia 0.30 403 6 O 200644 Flavobacteriales 0.13 172 3 F 2762318 Weeksellaceae 0.12 167 2 F1 2782232 Chryseobacterium group 0.12 165 101 G 59732 Chryseobacterium 0.04 47 47 S 1813611 Chryseobacterium cucumeris 0.00 6 0 G1 2593645 unclassified Chryseobacterium 0.00 2 2 S 3139392 Chryseobacterium sp. Chry.R1 0.00 1 1 S 2838877 Chryseobacterium sp. ZHDP1 0.00 1 1 S 2997336 Chryseobacterium sp. CY350 0.00 1 1 S 2778077 Chryseobacterium sp. FDAARGOS 1104 0.00 1 1 S 2713414 Chryseobacterium sp. POL2 0.00 4 4 S 2754694 Chryseobacterium manosquense 0.00 3 3 S 2983606 Chryseobacterium fluminis 0.00 2 2 S 253 Chryseobacterium indologenes 0.00 1 1 S 2929800 Chryseobacterium suipulveris 0.00 1 1 S 651561 Chryseobacterium arthrosphaerae 0.00 1 0 G 59734 Empedobacter 0.00 1 1 S 343874 Empedobacter falsenii 0.00 1 0 G 2766734 Faecalibacter 0.00 1 0 G1 2766735 unclassified Faecalibacter 0.00 1 1 S 3103144 Faecalibacter sp. LW9 0.12 161 5 F 49546 Flavobacteriaceae 0.06 75 51 G 237 Flavobacterium 0.01 9 9 S 2816357 Flavobacterium endoglycinae 0.00 4 0 G1 196869 unclassified Flavobacterium 0.00 2 2 S 1979344 Flavobacterium sp. MDT1-60 0.00 2 2 S 2732161 Flavobacterium sp. IMCC34852 0.00 3 3 S 2172098 Flavobacterium pallidum 0.00 3 3 S 2704140 Flavobacterium bizetiae 0.00 1 1 S 3003263 Flavobacterium eburneipallidum 0.00 1 1 S 986 Flavobacterium johnsoniae 0.00 1 1 S 2038737 Flavobacterium ardleyense 0.00 1 1 S 2897181 Flavobacterium channae 0.00 1 1 S 2602769 Flavobacterium alkalisoli 0.05 68 1 G 1016 Capnocytophaga 0.03 36 36 S 1017 Capnocytophaga gingivalis 0.01 20 20 S 1019 Capnocytophaga sputigena 0.00 4 4 S 327575 Capnocytophaga leadbetteri 0.00 4 0 G1 2640652 unclassified Capnocytophaga 0.00 4 4 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 2 2 S 28188 Capnocytophaga canimorsus 0.00 1 1 S 2708117 Capnocytophaga endodontalis 0.00 3 0 G 286104 Winogradskyella 0.00 3 3 S 2686077 Winogradskyella forsetii 0.00 3 0 G 104264 Cellulophaga 0.00 3 3 S 979 Cellulophaga lytica 0.00 3 0 G 2967089 Abyssalbus 0.00 3 3 S 2926907 Abyssalbus ytuae 0.00 2 0 G 83612 Psychroflexus 0.00 2 0 G1 196864 unclassified Psychroflexus 0.00 2 2 S 2777186 Psychroflexus sp. ALD_RP9 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.00 1 0 G 2715289 Amniculibacterium 0.00 1 0 G1 2767187 unclassified Amniculibacterium 0.00 1 1 S 2767188 Amniculibacterium sp. G2-70 0.05 62 0 O1 313602 Flavobacteriales incertae sedis 0.05 62 0 G 336809 Candidatus Karelsulcia 0.05 62 62 S 336810 Candidatus Karelsulcia muelleri 0.00 1 0 F 1755828 Ichthyobacteriaceae 0.00 1 0 G 1755829 Ichthyobacterium 0.00 1 1 S 242600 Ichthyobacterium seriolicida 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 3024544 Paracrocinitomix 0.00 1 1 S 2862509 Paracrocinitomix mangrovi 0.24 321 0 C 768503 Cytophagia 0.24 321 3 O 768507 Cytophagales 0.17 229 0 F 89373 Cytophagaceae 0.17 229 0 G 107 Spirosoma 0.17 224 224 S 2666025 Spirosoma endbachense 0.00 2 2 S 2057025 Spirosoma pollinicola 0.00 2 2 S 2735870 Spirosoma taeanense 0.00 1 0 G1 2621999 unclassified Spirosoma 0.00 1 1 S 2745947 Spirosoma sp. KUDC1026 0.05 68 0 F 1853232 Hymenobacteraceae 0.05 66 44 G 89966 Hymenobacter 0.01 11 11 S 2932254 Hymenobacter volaticus 0.00 5 0 G1 2615202 unclassified Hymenobacter 0.00 4 4 S 3093922 Hymenobacter sp. GOD-10R 0.00 1 1 S 2987689 Hymenobacter sp. YIM 151500-1 0.00 4 4 S 1411621 Hymenobacter sedentarius 0.00 1 1 S 748197 Hymenobacter yonginensis 0.00 1 1 S 2999067 Hymenobacter canadensis 0.00 2 0 G 323449 Pontibacter 0.00 2 0 G1 2648980 unclassified Pontibacter 0.00 2 2 S 2571030 Pontibacter sp. SGAir0037 0.00 6 0 F 1853234 Persicobacteraceae 0.00 6 0 G 1434007 Fulvitalea 0.00 6 6 S 1182444 Fulvitalea axinellae 0.00 4 0 F 1501348 Amoebophilaceae 0.00 4 0 G 273135 Candidatus Cardinium 0.00 3 3 S 247481 Candidatus Cardinium hertigii 0.00 1 0 G1 2641185 unclassified Candidatus Cardinium 0.00 1 1 S 650378 Cardinium endosymbiont of Sogatella furcifera 0.00 4 0 F 3141702 Leadbetterellaceae 0.00 3 3 G 312278 Emticicia 0.00 1 0 G 2173039 Arcticibacterium 0.00 1 1 S 1784714 Arcticibacterium luteifluviistationis 0.00 3 0 F 2762286 Fulvivirgaceae 0.00 2 0 G 1433993 Chryseolinea 0.00 2 2 S 2321403 Chryseolinea soli 0.00 1 0 G 396811 Fulvivirga 0.00 1 1 S 2904245 Fulvivirga ulvae 0.00 2 0 F 2762301 Marivirgaceae 0.00 2 1 G 869806 Marivirga 0.00 1 1 S 1006 Marivirga tractuosa 0.00 1 1 F 1522127 Catalimonadaceae 0.00 1 0 F 2896860 Spirosomataceae 0.00 1 0 G 120831 Dyadobacter 0.00 1 0 G1 2625061 unclassified Dyadobacter 0.00 1 1 S 3088362 Dyadobacter sp. 676 0.05 64 0 C 1853228 Chitinophagia 0.05 64 0 O 1853229 Chitinophagales 0.05 64 2 F 563835 Chitinophagaceae 0.04 55 0 G 379899 Niabella 0.03 38 38 S 1176587 Niabella ginsenosidivorans 0.01 17 17 S 577386 Niabella yanshanensis 0.00 6 1 G 79328 Chitinophaga 0.00 3 3 S 2267521 Chitinophaga caseinilytica 0.00 1 1 S 1004 Chitinophaga sancti 0.00 1 0 S 79329 Chitinophaga pinensis 0.00 1 1 S1 485918 Chitinophaga pinensis DSM 2588 0.00 1 0 G 504481 Sediminibacterium 0.00 1 1 G1 2635961 unclassified Sediminibacterium 0.03 34 0 C 117747 Sphingobacteriia 0.03 34 0 O 200666 Sphingobacteriales 0.02 33 1 F 84566 Sphingobacteriaceae 0.02 22 3 G 84567 Pedobacter 0.01 17 0 G1 2628915 unclassified Pedobacter 0.01 17 17 S 2995161 Pedobacter sp. SL55 0.00 1 1 S 188932 Pedobacter cryoconitis 0.00 1 1 S 2605747 Pedobacter aquae 0.01 8 1 G 28453 Sphingobacterium 0.01 7 7 S 28454 Sphingobacterium multivorum 0.00 2 0 G 423349 Mucilaginibacter 0.00 1 1 S 862126 Mucilaginibacter ginsenosidivorax 0.00 1 1 S 2682091 Mucilaginibacter ginkgonis 0.00 1 0 F 3088888 Aurantibacillaceae 0.00 1 0 G 3088889 Aurantibacillus 0.00 1 1 S 3036359 Aurantibacillus circumpalustris 0.00 1 0 C 1937959 Saprospiria 0.00 1 0 O 1936988 Saprospirales 0.00 1 0 F 89374 Saprospiraceae 0.00 1 1 G 1007 Saprospira 0.00 6 0 P 1853220 Rhodothermota 0.00 6 0 C 1853222 Rhodothermia 0.00 6 4 O 1853224 Rhodothermales 0.00 2 0 F 563843 Rhodothermaceae 0.00 1 0 G 29548 Rhodothermus 0.00 1 1 S 29549 Rhodothermus marinus 0.00 1 0 G 2893090 Rhodocaloribacter 0.00 1 1 S 2558931 Rhodocaloribacter litoris 0.00 5 0 P 1090 Chlorobiota 0.00 5 0 C 191410 Chlorobiia 0.00 5 0 O 191411 Chlorobiales 0.00 3 3 F 191412 Chlorobiaceae 0.00 2 0 F 2968741 Chloroherpetonaceae 0.00 2 0 G 100715 Chloroherpeton 0.00 2 0 S 100716 Chloroherpeton thalassium 0.00 2 2 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 3 0 P 1134404 Ignavibacteriota 0.00 3 0 C 795747 Ignavibacteria 0.00 3 0 O 795748 Ignavibacteriales 0.00 2 0 F 1334117 Melioribacteraceae 0.00 2 0 G 1134403 Melioribacter 0.00 2 0 S 1134405 Melioribacter roseus 0.00 2 2 S1 1191523 Melioribacter roseus P3M-2 0.00 1 0 F 795749 Ignavibacteriaceae 0.00 1 1 G 795750 Ignavibacterium 0.02 32 0 P 142182 Gemmatimonadota 0.02 32 0 C 219685 Gemmatimonadia 0.02 32 0 O 219686 Gemmatimonadales 0.02 32 2 F 219687 Gemmatimonadaceae 0.02 25 0 G 1706036 Gemmatirosa 0.02 25 25 S 861299 Gemmatirosa kalamazoonensis 0.00 5 0 G 173479 Gemmatimonas 0.00 5 5 S 1379270 Gemmatimonas phototrophica 0.00 1 0 P 456828 Candidatus Cloacimonadota 0.00 1 0 C 3039863 Candidatus Cloacimonadia 0.00 1 0 O 3039864 Candidatus Cloacimonadales 0.00 1 0 F 3039865 Candidatus Cloacimonadaceae 0.00 1 0 G 456826 Candidatus Cloacimonas 0.00 1 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.00 1 1 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.74 994 0 P 32066 Fusobacteriota 0.74 994 0 C 203490 Fusobacteriia 0.74 994 0 O 203491 Fusobacteriales 0.41 550 2 F 1129771 Leptotrichiaceae 0.41 547 37 G 32067 Leptotrichia 0.18 247 5 G1 2633022 unclassified Leptotrichia 0.12 159 159 S 712357 Leptotrichia sp. oral taxon 212 0.06 74 74 S 712362 Leptotrichia sp. oral taxon 221 0.00 5 5 S 712368 Leptotrichia sp. oral taxon 498 0.00 2 2 S 712361 Leptotrichia sp. oral taxon 218 0.00 2 2 S 1785996 Leptotrichia sp. oral taxon 847 0.14 184 184 S 157687 Leptotrichia wadei 0.04 48 48 S 554406 Leptotrichia hongkongensis 0.01 19 19 S 109328 Leptotrichia trevisanii 0.00 6 6 S 157688 Leptotrichia hofstadii 0.00 4 4 S 157691 Leptotrichia shahii 0.00 2 0 S 40542 Leptotrichia buccalis 0.00 2 2 S1 523794 Leptotrichia buccalis C-1013-b 0.00 1 0 G 34104 Streptobacillus 0.00 1 1 S 34105 Streptobacillus moniliformis 0.33 444 1 F 203492 Fusobacteriaceae 0.33 443 370 G 848 Fusobacterium 0.02 30 30 S 2663009 Fusobacterium pseudoperiodonticum 0.01 9 8 S 76857 Fusobacterium polymorphum 0.00 1 1 S1 393480 Fusobacterium polymorphum ATCC 10953 0.01 8 0 S 1583098 Fusobacterium hwasookii 0.01 8 8 S1 1307443 Fusobacterium hwasookii ChDC F206 0.01 7 7 S 76859 Fusobacterium animalis 0.00 5 5 S 851 Fusobacterium nucleatum 0.00 5 1 S 859 Fusobacterium necrophorum 0.00 4 4 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.00 3 2 S 155615 Fusobacterium vincentii 0.00 1 1 S1 1307427 Fusobacterium vincentii ChDC F8 0.00 3 3 S 2764326 Fusobacterium hominis 0.00 2 0 S 850 Fusobacterium mortiferum 0.00 2 2 S1 469616 Fusobacterium mortiferum ATCC 9817 0.00 1 0 G1 2648384 unclassified Fusobacterium 0.00 1 1 S 671211 Fusobacterium sp. oral taxon 203 0.72 964 10 P 200940 Thermodesulfobacteriota 0.67 896 1 C 3031651 Desulfuromonadia 0.67 895 0 O 69541 Desulfuromonadales 0.67 891 0 F 213421 Desulfuromonadaceae 0.67 891 886 G 890 Desulfuromonas 0.00 5 5 S 1603606 Desulfuromonas soudanensis 0.00 4 0 F 3031659 Geopsychrobacteraceae 0.00 4 0 G 37817 Desulfuromusa 0.00 4 0 G1 97902 environmental samples 0.00 4 4 S 219183 uncultured Desulfuromusa sp. 0.02 29 0 C 67799 Thermodesulfobacteria 0.02 29 28 O 188710 Thermodesulfobacteriales 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 1 G 1740 Thermodesulfobacterium 0.01 11 0 C 3031646 Desulfarculia 0.01 11 0 O 453227 Desulfarculales 0.01 11 0 F 453228 Desulfarculaceae 0.01 11 0 G 453229 Desulfarculus 0.01 11 0 S 453230 Desulfarculus baarsii 0.01 11 11 S1 644282 Desulfarculus baarsii DSM 2075 0.01 8 0 C 3031449 Desulfovibrionia 0.01 8 0 O 213115 Desulfovibrionales 0.01 7 0 F 194924 Desulfovibrionaceae 0.00 5 0 G 2910978 Megalodesulfovibrio 0.00 5 0 S 879 Megalodesulfovibrio gigas 0.00 5 5 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.00 1 1 G 2035811 Pseudodesulfovibrio 0.00 1 0 F 213117 Desulfohalobiaceae 0.00 1 0 G 45662 Desulfohalobium 0.00 1 0 S 45663 Desulfohalobium retbaense 0.00 1 1 S1 485915 Desulfohalobium retbaense DSM 5692 0.00 6 0 C 3031647 Desulfobaccia 0.00 6 0 O 3031655 Desulfobaccales 0.00 6 0 F 3031656 Desulfobaccaceae 0.00 6 0 G 60892 Desulfobacca 0.00 6 0 S 60893 Desulfobacca acetoxidans 0.00 6 6 S1 880072 Desulfobacca acetoxidans DSM 11109 0.00 3 0 C 3031451 Desulfobulbia 0.00 3 0 O 3024411 Desulfobulbales 0.00 3 0 F 213121 Desulfobulbaceae 0.00 3 0 G 893 Desulfobulbus 0.00 3 3 S 1986146 Desulfobulbus oralis 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 1 G 2289 Desulfobacter 0.35 466 7 D1 1783257 PVC group 0.17 231 0 P 203682 Planctomycetota 0.16 214 73 C 203683 Planctomycetia 0.05 66 0 O 112 Planctomycetales 0.05 66 4 F 126 Planctomycetaceae 0.02 31 0 G 1649490 Rubinisphaera 0.02 31 0 S 119 Rubinisphaera brasiliensis 0.02 31 31 S1 756272 Rubinisphaera brasiliensis DSM 5305 0.01 16 0 G 118 Planctomyces 0.01 16 0 G1 2648843 unclassified Planctomyces 0.01 16 16 S 1632864 Planctomyces sp. SH-PL14 0.01 8 2 G 1649453 Gimesia 0.00 6 6 S 2527964 Gimesia aquarii 0.00 4 0 G 2795778 Caulifigura 0.00 4 4 S 2527983 Caulifigura coniformis 0.00 2 0 G 2795780 Symmachiella 0.00 2 2 S 2527995 Symmachiella dynata 0.00 1 1 G 1649480 Planctopirus 0.03 43 0 O 2691354 Pirellulales 0.03 41 1 F 2691357 Pirellulaceae 0.03 35 0 G 2005380 Mariniblastus 0.03 35 35 S 980251 Mariniblastus fucicola 0.00 3 0 G 123 Pirellula 0.00 3 0 G1 2639138 unclassified Pirellula 0.00 3 3 S 1632865 Pirellula sp. SH-Sr6A 0.00 1 0 G 2714594 Bremerella 0.00 1 0 G1 2795601 unclassified Bremerella 0.00 1 1 S 3026424 Bremerella sp. P1 0.00 1 0 G 2807414 Anatilimnocola 0.00 1 1 S 2528021 Anatilimnocola aggregata 0.00 2 0 F 2691358 Thermoguttaceae 0.00 2 0 G 1676125 Thermogutta 0.00 2 2 S 1331910 Thermogutta terrifontis 0.02 25 0 O 2691355 Gemmatales 0.02 25 9 F 1914233 Gemmataceae 0.01 15 0 G 2051044 Tuwongella 0.01 15 15 S 692036 Tuwongella immobilis 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.01 7 0 O 2691356 Isosphaerales 0.01 7 2 F 1763524 Isosphaeraceae 0.00 4 0 G 1763521 Paludisphaera 0.00 4 4 S 1387353 Paludisphaera borealis 0.00 1 0 G 127 Isosphaera 0.00 1 0 S 128 Isosphaera pallida 0.00 1 1 S1 575540 Isosphaera pallida ATCC 43644 0.01 16 0 C 2897345 Candidatus Uabimicrobiia 0.01 16 0 O 2897347 Candidatus Uabimicrobiales 0.01 16 0 F 2897348 Candidatus Uabimicrobiaceae 0.01 16 0 G 2897349 Candidatus Uabimicrobium 0.01 16 16 S 2596890 Candidatus Uabimicrobium amorphum 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 2483366 Sedimentisphaerales 0.00 1 0 F 2690158 Anaerohalosphaeraceae 0.00 1 0 G 2690159 Anaerohalosphaera 0.00 1 1 S 1936003 Anaerohalosphaera lusitana 0.11 152 0 P 74201 Verrucomicrobiota 0.07 89 0 C 203494 Verrucomicrobiia 0.07 89 0 O 48461 Verrucomicrobiales 0.07 89 21 F 203557 Verrucomicrobiaceae 0.04 54 0 G 2735 Verrucomicrobium 0.04 53 0 G1 2625155 unclassified Verrucomicrobium 0.04 53 53 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 S 2736 Verrucomicrobium spinosum 0.00 1 1 S1 240016 Verrucomicrobium spinosum DSM 4136 = JCM 18804 0.01 13 0 G 1348508 Roseimicrobium 0.01 13 0 G1 2711230 unclassified Roseimicrobium 0.01 13 13 S 2711231 Roseimicrobium sp. ORNL1 0.00 1 0 G 574899 Haloferula 0.00 1 1 S 490095 Haloferula helveola 0.02 32 0 P1 326457 Verrucomicrobiota incertae sedis 0.02 32 0 G 1541670 Methylacidimicrobium 0.02 32 32 G1 2730358 unclassified Methylacidimicrobium 0.02 27 0 C 414999 Opitutia 0.01 20 0 O 415000 Opitutales 0.01 20 8 F 134623 Opitutaceae 0.01 11 0 G 2986286 Horticoccus 0.01 11 11 S 2862869 Horticoccus luteus 0.00 1 0 G 2576890 Nibricoccus 0.00 1 1 S 2576891 Nibricoccus aquaticus 0.01 7 0 O 415001 Puniceicoccales 0.01 7 0 O1 3056381 Puniceicoccales incertae sedis 0.01 7 0 G 3049269 Candidatus Pelagisphaera 0.01 7 7 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 3 0 C 134549 Spartobacteria 0.00 3 0 G 134550 Candidatus Xiphinematobacter 0.00 3 0 G1 2648876 unclassified Candidatus Xiphinematobacter 0.00 3 3 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.05 72 0 P 204428 Chlamydiota 0.05 72 18 C 204429 Chlamydiia 0.04 53 6 O 1963360 Parachlamydiales 0.03 40 0 F 689704 Candidatus Rhabdochlamydiaceae 0.03 40 13 G 292833 Candidatus Rhabdochlamydia 0.02 26 26 S 225148 Candidatus Rhabdochlamydia porcellionis 0.00 1 1 S 2720720 Candidatus Rhabdochlamydia oedothoracis 0.00 4 0 F 92713 Parachlamydiaceae 0.00 3 0 G 282132 Candidatus Protochlamydia 0.00 3 3 S 389348 Candidatus Protochlamydia naegleriophila 0.00 1 0 G 83551 Parachlamydia 0.00 1 0 S 83552 Parachlamydia acanthamoebae 0.00 1 1 S1 765952 Parachlamydia acanthamoebae UV-7 0.00 2 1 F 92712 Simkaniaceae 0.00 1 0 G 34093 Simkania 0.00 1 0 S 83561 Simkania negevensis 0.00 1 1 S1 331113 Simkania negevensis Z 0.00 1 0 F 92714 Waddliaceae 0.00 1 0 G 71666 Waddlia 0.00 1 0 S 71667 Waddlia chondrophila 0.00 1 1 S1 716544 Waddlia chondrophila WSU 86-1044 0.00 1 0 O 51291 Chlamydiales 0.00 1 1 F 809 Chlamydiaceae 0.00 3 0 P 134625 Kiritimatiellota 0.00 3 0 C 1921781 Kiritimatiellia 0.00 3 0 O 1921782 Kiritimatiellales 0.00 3 0 F 1921783 Kiritimatiellaceae 0.00 3 0 G 1921784 Kiritimatiella 0.00 3 3 S 1307763 Kiritimatiella glycovorans 0.00 1 0 P 256845 Lentisphaerota 0.00 1 0 C 1313211 Lentisphaeria 0.00 1 0 O 278081 Lentisphaerales 0.00 1 0 F 566277 Lentisphaeraceae 0.00 1 0 G 256846 Lentisphaera 0.00 1 1 S 1658616 Lentisphaera profundi 0.13 179 0 D1 2323 Bacteria incertae sedis 0.13 179 0 D2 1783234 Bacteria candidate phyla 0.12 155 41 P 95818 Candidatus Saccharibacteria 0.07 91 0 C 2093818 Candidatus Saccharimonadia 0.07 91 0 O 2093819 Candidatus Nanosynbacterales 0.07 91 0 F 2093822 Candidatus Nanosynbacteraceae 0.07 91 90 G 2093823 Candidatus Nanosynbacter 0.00 1 1 S 2093824 Candidatus Nanosynbacter lyticus 0.02 22 0 G 2831665 Candidatus Mycosynbacter 0.02 22 22 S 2665156 Candidatus Mycosynbacter amalyticus 0.00 1 0 G 2905967 Candidatus Minimicrobia 0.00 1 1 S 2841264 Candidatus Minimicrobia vallesae 0.02 24 0 D3 95901 Candidatus Dependentiae 0.02 24 0 C 2497643 Candidatus Babeliae 0.02 24 0 O 2497644 Candidatus Babeliales 0.02 24 0 F 2953756 Candidatus Chromulinivoraceae 0.02 24 0 G 2953757 Candidatus Chromulinivorax 0.02 24 24 S 2066483 Candidatus Chromulinivorax destructor 0.05 70 0 P 29547 Campylobacterota 0.05 70 0 C 3031852 Epsilonproteobacteria 0.05 69 4 O 213849 Campylobacterales 0.04 49 0 F 2932623 Sulfurospirillaceae 0.04 49 0 G 57665 Sulfurospirillum 0.04 49 0 S 66821 Sulfurospirillum multivorans 0.04 49 49 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.01 15 0 F 72294 Campylobacteraceae 0.01 15 10 G 194 Campylobacter 0.00 2 2 S 197 Campylobacter jejuni 0.00 2 2 S 824 Campylobacter gracilis 0.00 1 1 S 827 Campylobacter ureolyticus 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 2795691 Nitratiruptoraceae 0.00 1 0 G 269258 Nitratiruptor 0.00 1 1 G1 2624044 unclassified Nitratiruptor 0.05 62 0 P 203691 Spirochaetota 0.05 62 0 C 203692 Spirochaetia 0.04 60 48 O 136 Spirochaetales 0.00 6 0 F 2845253 Treponemataceae 0.00 6 0 G 157 Treponema 0.00 3 0 S 88058 Treponema primitia 0.00 3 3 S1 545694 Treponema primitia ZAS-2 0.00 2 2 S 69710 Treponema vincentii 0.00 1 1 S 162 Treponema phagedenis 0.00 4 0 F 1643685 Borreliaceae 0.00 4 0 G 64895 Borreliella 0.00 3 3 S 100177 Borreliella lusitaniae 0.00 1 1 S 29519 Borreliella garinii 0.00 1 0 F 137 Spirochaetaceae 0.00 1 1 G 2834378 Entomospira 0.00 1 0 F 2791015 Sphaerochaetaceae 0.00 1 0 G 3062336 Parasphaerochaeta 0.00 1 0 S 273376 Parasphaerochaeta coccoides 0.00 1 1 S1 760011 Parasphaerochaeta coccoides DSM 17374 0.00 2 0 O 1643688 Leptospirales 0.00 2 0 F 170 Leptospiraceae 0.00 2 1 G 171 Leptospira 0.00 1 0 S 172 Leptospira biflexa 0.00 1 1 S1 145259 Leptospira biflexa serovar Patoc 0.02 29 0 P 508458 Synergistota 0.02 29 0 C 649775 Synergistia 0.02 29 0 O 649776 Synergistales 0.02 29 0 F 649777 Synergistaceae 0.02 29 0 G 81411 Aminomonas 0.02 29 0 S 81412 Aminomonas paucivorans 0.02 29 29 S1 584708 Aminomonas paucivorans DSM 12260 0.01 16 0 P 57723 Acidobacteriota 0.01 7 0 C 204432 Terriglobia 0.01 7 0 O 204433 Terriglobales 0.01 7 7 F 204434 Acidobacteriaceae 0.00 6 0 C 533205 Holophagae 0.00 3 0 O 533206 Acanthopleuribacterales 0.00 3 0 F 533207 Acanthopleuribacteraceae 0.00 3 0 G 2915177 Sulfidibacter 0.00 3 3 S 2818388 Sulfidibacter corallicola 0.00 3 0 O 574975 Holophagales 0.00 3 0 F 574976 Holophagaceae 0.00 3 3 G 44675 Geothrix 0.00 2 0 C 1813735 Vicinamibacteria 0.00 2 0 O 2910145 Vicinamibacterales 0.00 2 0 F 2211325 Vicinamibacteraceae 0.00 2 2 G 2004797 Luteitalea 0.00 1 0 C 1562566 Blastocatellia 0.00 1 1 G 458032 Chloracidobacterium 0.01 11 0 P 40117 Nitrospirota 0.01 11 0 C 203693 Nitrospiria 0.01 11 0 O 189778 Nitrospirales 0.01 11 0 F 189779 Nitrospiraceae 0.01 11 0 G 1234 Nitrospira 0.01 11 11 S 42253 Nitrospira moscoviensis 0.01 10 0 P 2818505 Myxococcota 0.01 8 0 P1 3031711 Polyangia 0.01 8 1 O 3031712 Polyangiales 0.01 7 0 F 49 Polyangiaceae 0.01 7 0 G 39643 Sorangium 0.01 7 7 S 56 Sorangium cellulosum 0.00 2 0 C 32015 Myxococcia 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 1 G 32 Myxococcus 0.00 1 0 F 39 Archangiaceae 0.00 1 0 G 44 Melittangium 0.00 1 0 S 83453 Melittangium boletus 0.00 1 1 S1 1294270 Melittangium boletus DSM 14713 0.01 8 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 8 0 P 1293497 Nitrospinota 0.01 8 0 C 1293498 Nitrospinia 0.01 8 0 O 1293499 Nitrospinales 0.01 8 0 F 407032 Nitrospinaceae 0.01 8 0 G 35800 Nitrospina 0.01 8 8 S 1323948 Nitrospina watsonii 0.00 6 0 P 3018035 Bdellovibrionota 0.00 6 0 C 3031419 Bacteriovoracia 0.00 6 0 O 2024979 Bacteriovoracales 0.00 4 0 F 1652132 Halobacteriovoraceae 0.00 4 0 G 1652133 Halobacteriovorax 0.00 4 0 G1 2639665 unclassified Halobacteriovorax 0.00 4 4 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 2 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 1 0 G 263370 Peredibacter 0.00 1 1 S 28202 Peredibacter starrii 0.00 5 0 P 200783 Aquificota 0.00 5 0 C 187857 Aquificia 0.00 5 0 O 32069 Aquificales 0.00 4 0 F 224027 Hydrogenothermaceae 0.00 4 4 G 212790 Sulfurihydrogenibium 0.00 1 1 F 64898 Aquificaceae 0.00 4 0 P 200918 Thermotogota 0.00 4 0 C 188708 Thermotogae 0.00 2 0 O 1769716 Mesoaciditogales 0.00 2 0 F 1769717 Mesoaciditogaceae 0.00 2 0 G 1769718 Athalassotoga 0.00 2 2 S 1441386 Athalassotoga saccharophila 0.00 1 0 O 2419 Thermotogales 0.00 1 0 F 1643950 Fervidobacteriaceae 0.00 1 0 G 2420 Thermosipho 0.00 1 1 S 2571116 Thermosipho ferrireducens 0.00 1 0 O 1643947 Petrotogales 0.00 1 1 F 1643949 Petrotogaceae 0.00 4 0 P 200930 Deferribacterota 0.00 4 0 C 68337 Deferribacteres 0.00 4 4 O 191393 Deferribacterales 0.00 1 0 P 74152 Elusimicrobiota 0.00 1 0 C 447830 Endomicrobiia 0.00 1 0 O 1783344 Endomicrobiales 0.00 1 0 F 1783343 Endomicrobiaceae 0.00 1 0 G 1408194 Endomicrobium 0.00 1 1 S 1408204 Candidatus Endomicrobium trichonymphae 0.00 1 0 P 68297 Dictyoglomota 0.00 1 0 C 203486 Dictyoglomia 0.00 1 0 O 203487 Dictyoglomales 0.00 1 0 F 203488 Dictyoglomaceae 0.00 1 1 G 13 Dictyoglomus 0.00 1 0 D1 2498710 Caldisericota/Cryosericota group 0.00 1 0 P 67814 Caldisericota 0.00 1 0 C 693071 Caldisericia 0.00 1 0 O 693072 Caldisericales 0.00 1 0 F 693073 Caldisericaceae 0.00 1 0 G 693074 Caldisericum 0.00 1 0 S 693075 Caldisericum exile 0.00 1 1 S1 511051 Caldisericum exile AZM16c01 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 3 1 D 2157 Archaea 0.00 2 0 P 28890 Euryarchaeota 0.00 2 0 P1 2290931 Stenosarchaea group 0.00 2 0 C 183963 Halobacteria 0.00 2 0 O 2235 Halobacteriales 0.00 2 0 F 1644056 Haloferacaceae 0.00 2 0 G 1644057 Salinigranum 0.00 2 2 S 1515595 Salinigranum marinum 0.09 121 0 D 10239 Viruses 0.05 65 0 C 2840056 Naldaviricetes 0.05 65 0 O 2840070 Lefavirales 0.05 65 0 F 10442 Baculoviridae 0.05 65 0 G 558017 Betabaculovirus 0.05 65 0 S 3051997 Betabaculovirus chofumiferanae 0.05 65 65 S1 56947 Choristoneura fumiferana granulovirus 0.04 56 0 D1 2731341 Duplodnaviria 0.04 56 0 K 2731360 Heunggongvirae 0.04 56 0 P 2731618 Uroviricota 0.04 56 0 C 2731619 Caudoviricetes 0.04 56 0 F 2946170 Straboviridae 0.04 56 0 F1 1198136 Tevenvirinae 0.04 56 0 G 10663 Tequatrovirus 0.04 56 0 S 2844199 Tequatrovirus gee4507 0.04 56 56 S1 2502306 Escherichia phage vB_EcoM_G4507