11.15 12032 12032 U 0 unclassified 88.85 95889 27 R 1 root 88.77 95799 2 R1 131567 cellular organisms 88.76 95792 1322 D 2 Bacteria 51.14 55188 441 D1 1783272 Terrabacteria group 48.46 52301 79 P 1239 Bacillota 47.53 51300 9643 C 91061 Bacilli 23.40 25252 1071 O 1385 Bacillales 9.90 10687 434 F 186817 Bacillaceae 8.67 9358 322 G 1386 Bacillus 6.21 6700 182 G1 653685 Bacillus subtilis group 5.36 5782 6 G2 1938374 Bacillus amyloliquefaciens group 5.15 5562 5527 S 492670 Bacillus velezensis 0.03 34 34 S1 1385727 Bacillus velezensis NAU-B3 0.00 1 1 S1 1458206 Bacillus velezensis NJN-6 0.20 214 214 S 1390 Bacillus amyloliquefaciens 0.56 608 401 S 1423 Bacillus subtilis 0.13 135 132 S1 135461 Bacillus subtilis subsp. subtilis 0.00 3 3 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.07 72 72 S1 86029 Bacillus subtilis subsp. natto 0.04 45 45 S 1452 Bacillus atrophaeus 0.04 39 0 G2 653388 Bacillus mojavensis subgroup 0.04 39 39 S 260554 Bacillus halotolerans 0.02 18 18 S 1402 Bacillus licheniformis 0.02 18 18 S 483913 Bacillus inaquosorum 0.01 8 8 S 1648923 Bacillus paralicheniformis 1.45 1560 52 G1 86661 Bacillus cereus group 0.45 481 342 S 1396 Bacillus cereus 0.06 68 68 S1 1454382 Bacillus cereus D17 0.05 57 57 S1 1003239 Bacillus cereus C1L 0.01 8 8 S1 572264 Bacillus cereus 03BB102 0.01 6 0 S1 1179100 Bacillus cereus biovar anthracis 0.01 6 6 S2 637380 Bacillus cereus biovar anthracis str. CI 0.39 424 380 S 1428 Bacillus thuringiensis 0.01 11 11 S1 1217737 Bacillus thuringiensis HD-789 0.01 9 9 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 7 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.01 7 7 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.01 7 7 S1 529122 Bacillus thuringiensis YBT-1518 0.00 5 5 S1 180850 Bacillus thuringiensis serovar indiana 0.00 2 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 2 2 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 2 2 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 0.25 268 266 S 1392 Bacillus anthracis 0.00 2 2 S1 261591 Bacillus anthracis str. Vollum 0.19 207 207 S 64104 Bacillus pseudomycoides 0.04 39 0 G2 2750818 unclassified Bacillus cereus group 0.04 39 39 S 1892404 Bacillus sp. ABP14 0.03 37 32 S 1405 Bacillus mycoides 0.00 5 5 S1 315730 Bacillus mycoides KBAB4 0.03 28 28 S 2026191 Bacillus luti 0.02 20 20 S 2026186 Bacillus paranthracis 0.00 3 3 S 2817477 Bacillus paramobilis 0.00 1 1 S 155322 Bacillus toyonensis 0.37 396 0 G1 1792192 Bacillus altitudinis complex 0.37 396 396 S 293387 Bacillus altitudinis 0.25 265 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.20 219 219 S 467262 Bacillus sp. T3 0.01 13 13 S 2841656 Bacillus sp. ZHX3 0.01 10 10 S 3077323 Bacillus sp. SI2 0.01 9 9 S 2874284 Bacillus sp. CRB-7 0.01 7 7 S 1806216 Bacillus sp. RZ2MS9 0.00 3 3 S 2709784 Bacillus sp. KH172YL63 0.00 2 2 S 2925318 Bacillus sp. N5-665 0.00 1 1 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2789210 Bacillus sp. A1(2020) 0.07 71 71 S 1408 Bacillus pumilus 0.04 43 43 S 561879 Bacillus safensis 0.00 1 1 S 1455 Bacillus badius 0.17 186 0 G 2800373 Priestia 0.15 161 161 S 1404 Priestia megaterium 0.02 25 25 S 412384 Priestia aryabhattai 0.15 157 0 G 84406 Virgibacillus 0.14 154 154 S 447199 Virgibacillus salarius 0.00 3 0 G1 2620237 unclassified Virgibacillus 0.00 3 3 S 2700081 Virgibacillus sp. MSP4-1 0.09 99 27 G 2837504 Heyndrickxia 0.07 72 72 S 1398 Heyndrickxia coagulans 0.06 70 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.06 70 0 S 86665 Halalkalibacterium halodurans 0.06 70 70 S1 272558 Halalkalibacterium halodurans C-125 0.05 51 0 G 175304 Lentibacillus 0.04 45 0 G1 2614679 unclassified Lentibacillus 0.04 45 45 S 2518176 Lentibacillus sp. CBA3610 0.00 5 5 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 1 S 2911514 Lentibacillus daqui 0.04 40 2 G 400634 Lysinibacillus 0.02 18 18 S 2590012 Lysinibacillus agricola 0.01 8 7 S 1421 Lysinibacillus sphaericus 0.00 1 1 S1 444177 Lysinibacillus sphaericus C3-41 0.01 8 0 G1 2636778 unclassified Lysinibacillus 0.01 8 8 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 3 3 S 28031 Lysinibacillus fusiformis 0.00 1 1 S 2086577 Lysinibacillus timonensis 0.03 35 1 G 2685905 Salicibibacter 0.03 33 33 S 2743001 Salicibibacter cibi 0.00 1 1 S 2099786 Salicibibacter kimchii 0.03 35 0 G 2675230 Cytobacillus 0.03 32 32 S 665099 Cytobacillus oceanisediminis 0.00 2 2 S 3051614 Cytobacillus pseudoceanisediminis 0.00 1 1 S 1399 Cytobacillus firmus 0.03 32 0 G 2005375 Alkalicoccus 0.03 32 32 S 1667239 Alkalicoccus halolimnae 0.03 31 9 G 129337 Geobacillus 0.01 11 3 S 33940 Geobacillus thermodenitrificans 0.01 8 8 S1 420246 Geobacillus thermodenitrificans NG80-2 0.01 9 9 S 860353 Geobacillus proteiniphilus 0.00 1 1 S 1921421 Geobacillus genomosp. 3 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1233873 Geobacillus sp. GHH01 0.02 26 4 G 2675233 Metabacillus 0.02 22 18 G1 2675274 unclassified Metabacillus 0.00 4 4 S 2897333 Metabacillus sp. B2-18 0.02 23 0 G 2675229 Peribacillus 0.02 19 19 S 264697 Peribacillus muralis 0.00 2 2 S 1407 Peribacillus psychrosaccharolyticus 0.00 2 2 S 228899 Peribacillus asahii 0.02 19 0 G 351195 Salimicrobium 0.01 15 0 G1 2619739 unclassified Salimicrobium 0.01 15 15 S 3095364 Salimicrobium sp. PL1-032A 0.00 4 4 S 1230341 Salimicrobium jeotgali 0.02 18 18 G 182709 Oceanobacillus 0.01 15 0 G 150247 Anoxybacillus 0.01 9 9 S 294699 Anoxybacillus amylolyticus 0.00 5 5 G1 2639704 unclassified Anoxybacillus 0.00 1 0 S 33934 Anoxybacillus flavithermus 0.00 1 1 S1 491915 Anoxybacillus flavithermus WK1 0.01 11 0 G 45667 Halobacillus 0.01 7 7 S 2932257 Halobacillus salinarum 0.00 3 3 S 45668 Halobacillus litoralis 0.00 1 1 S 2932258 Halobacillus shinanisalinarum 0.01 11 0 G 2837508 Rossellomorea 0.01 11 11 S 189381 Rossellomorea marisflavi 0.01 8 0 G 2785518 Radiobacillus 0.01 8 8 S 2594883 Radiobacillus deserti 0.01 7 0 G 1906945 Parageobacillus 0.01 7 7 S 1426 Parageobacillus thermoglucosidasius 0.00 5 0 G 2675231 Mesobacillus 0.00 4 4 S 285983 Mesobacillus subterraneus 0.00 1 0 G1 2675270 unclassified Mesobacillus 0.00 1 1 S 2880221 Mesobacillus sp. S13 0.00 4 0 G 2675232 Neobacillus 0.00 3 3 S 1193713 Neobacillus mesonae 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070676 Neobacillus sp. PS2-9 0.00 3 0 G 1433999 Domibacillus 0.00 3 0 G1 2632383 unclassified Domibacillus 0.00 3 3 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 2 0 G 2804231 Lederbergia 0.00 2 2 S 1467 Lederbergia lenta 0.00 2 0 G 2837506 Niallia 0.00 1 1 S 1397 Niallia circulans 0.00 1 0 G1 2837522 unclassified Niallia 0.00 1 1 S 3082444 Niallia sp. XMNu-256 0.00 1 0 G 2837485 Evansella 0.00 1 0 S 1413 Evansella cellulosilytica 0.00 1 1 S1 649639 Evansella cellulosilytica DSM 2522 0.00 1 0 G 1329200 Fictibacillus 0.00 1 0 G1 2644029 unclassified Fictibacillus 0.00 1 1 S 2991053 Fictibacillus sp. KU28468 0.00 1 1 G 2893057 Shouchella 0.00 1 0 G 459532 Terribacillus 0.00 1 1 G1 2636508 unclassified Terribacillus 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 9.03 9744 5 F 90964 Staphylococcaceae 9.00 9709 132 G 1279 Staphylococcus 8.28 8935 8922 S 1280 Staphylococcus aureus 0.01 7 7 S1 1229492 Staphylococcus aureus 08BA02176 0.00 3 3 S1 548470 Staphylococcus aureus subsp. aureus MN8 0.00 2 2 S1 985006 Staphylococcus aureus subsp. aureus LGA251 0.00 1 1 S1 273036 Staphylococcus aureus RF122 0.37 395 395 S 70255 Staphylococcus condimenti 0.08 85 85 S 1282 Staphylococcus epidermidis 0.05 59 59 S 29378 Staphylococcus arlettae 0.02 21 0 G1 2815305 Staphylococcus intermedius group 0.02 21 21 S 283734 Staphylococcus pseudintermedius 0.02 17 17 S 1283 Staphylococcus haemolyticus 0.02 17 17 S 1286 Staphylococcus simulans 0.01 16 16 S 28035 Staphylococcus lugdunensis 0.01 12 12 S 1290 Staphylococcus hominis 0.01 7 7 S 985002 Staphylococcus argenteus 0.00 4 1 G1 91994 unclassified Staphylococcus 0.00 3 3 S 1715860 Staphylococcus sp. AntiMn-1 0.00 3 3 S 201828 Staphylococcus casei 0.00 2 0 S 29388 Staphylococcus capitis 0.00 2 2 S1 74703 Staphylococcus capitis subsp. urealyticus 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.00 1 1 S 46126 Staphylococcus chromogenes 0.00 1 1 S 29382 Staphylococcus cohnii 0.00 1 1 S 246432 Staphylococcus equorum 0.02 17 0 G 2803850 Mammaliicoccus 0.02 17 17 S 1296 Mammaliicoccus sciuri 0.01 10 0 G 45669 Salinicoccus 0.01 10 0 G1 2628837 unclassified Salinicoccus 0.01 10 10 S 3136731 Salinicoccus sp. Bachu38 0.00 2 0 G 3076173 Macrococcoides 0.00 2 2 S 69966 Macrococcoides caseolyticum 0.00 1 0 G 227979 Jeotgalicoccus 0.00 1 0 G1 2630462 unclassified Jeotgalicoccus 0.00 1 1 S 946435 Jeotgalicoccus sp. ATCC 8456 2.26 2435 1 F 186820 Listeriaceae 2.16 2327 175 G 1637 Listeria 1.14 1225 0 S 1638 Listeria ivanovii 1.14 1225 0 S1 202751 Listeria ivanovii subsp. ivanovii 1.14 1225 1225 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.52 565 0 G1 2642072 unclassified Listeria 0.52 565 565 S 1844999 Listeria sp. PSOL-1 0.30 321 321 S 1639 Listeria monocytogenes 0.03 30 30 S 1497681 Listeria newyorkensis 0.01 11 11 S 1006155 Listeria weihenstephanensis 0.10 107 0 G 2755 Brochothrix 0.10 107 107 S 2756 Brochothrix thermosphacta 0.65 702 1 F 186822 Paenibacillaceae 0.31 337 7 G 44249 Paenibacillus 0.08 89 87 S 1406 Paenibacillus polymyxa 0.00 2 2 S1 1413214 Paenibacillus polymyxa SQR-21 0.08 82 82 S 562959 Paenibacillus cellulositrophicus 0.05 50 3 G1 185978 unclassified Paenibacillus 0.01 12 12 S 2921709 Paenibacillus sp. FSL W8-0186 0.01 12 12 S 2921361 Paenibacillus sp. FSL E2-0178 0.01 7 7 S 715179 Paenibacillus sp. sptzw28 0.00 4 4 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 4 4 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 2 2 S 2979727 Paenibacillus sp. KS-LC4 0.00 2 2 S 1536771 Paenibacillus sp. FSL R5-0912 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 2211212 Paenibacillus sp. DCT19 0.00 1 1 S 2921450 Paenibacillus sp. FSL K6-0276 0.00 1 1 S 2741301 Paenibacillus sp. URB8-2 0.03 36 36 S 2509456 Paenibacillus protaetiae 0.02 26 2 S 1464 Paenibacillus larvae 0.02 24 24 S1 147375 Paenibacillus larvae subsp. larvae 0.02 23 23 S 79263 Paenibacillus chitinolyticus 0.01 9 9 S 1778678 Paenibacillus psychroresistens 0.00 5 5 S 61624 Paenibacillus mucilaginosus 0.00 3 3 S 1178515 Paenibacillus swuensis 0.00 3 3 S 682956 Paenibacillus jilunlii 0.00 2 2 S 2909671 Paenibacillus spongiae 0.00 1 1 S 130049 Paenibacillus dendritiformis 0.00 1 1 S 521520 Paenibacillus urinalis 0.21 223 0 F1 85151 Aneurinibacillus group 0.21 223 214 G 55079 Aneurinibacillus 0.01 9 9 S 1500254 Aneurinibacillus soli 0.13 136 0 G 329857 Cohnella 0.12 130 130 S 2507935 Cohnella abietis 0.01 6 6 S 2674991 Cohnella candidum 0.00 5 1 G 55080 Brevibacillus 0.00 3 3 S 45462 Brevibacillus borstelensis 0.00 1 0 G1 2684853 unclassified Brevibacillus 0.00 1 1 S 319501 Brevibacillus sp. WF146 0.27 286 6 F 186818 Planococcaceae 0.11 123 1 G 160795 Ureibacillus 0.08 84 84 S 367743 Ureibacillus thermophilus 0.04 38 38 S 51173 Ureibacillus thermosphaericus 0.11 115 0 G 651660 Paenisporosarcina 0.10 112 112 S 2320858 Paenisporosarcina cavernae 0.00 3 3 S 417367 Paenisporosarcina antarctica 0.02 17 13 G 1372 Planococcus 0.00 4 0 G1 2662419 unclassified Planococcus (in: firmicutes) 0.00 4 4 S 2058136 Planococcus sp. MB-3u-03 0.02 17 15 G 1569 Sporosarcina 0.00 1 1 S 633404 Sporosarcina thermotolerans 0.00 1 0 G1 2647733 unclassified Sporosarcina 0.00 1 1 S 2810514 Sporosarcina sp. Marseille-Q4063 0.01 6 0 G 889388 Chryseomicrobium 0.01 6 0 G1 2625558 unclassified Chryseomicrobium 0.01 6 6 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.00 2 0 G 648800 Solibacillus 0.00 2 0 S 76853 Solibacillus silvestris 0.00 2 2 S1 1002809 Solibacillus silvestris StLB046 0.18 196 0 F 186823 Alicyclobacillaceae 0.18 195 4 G 29330 Alicyclobacillus 0.18 191 191 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 G 1129704 Kyrpidia 0.08 86 0 F 539738 Gemellaceae 0.08 86 40 G 1378 Gemella 0.02 17 17 S 29391 Gemella morbillorum 0.01 15 15 S 84135 Gemella sanguinis 0.01 14 9 G1 2624949 unclassified Gemella 0.00 5 5 S 2840371 Gemella sp. zg-570 0.03 35 0 O1 539002 Bacillales incertae sedis 0.03 34 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.03 34 27 G 33986 Exiguobacterium 0.01 6 6 S 1428684 Exiguobacterium alkaliphilum 0.00 1 0 G1 2644629 unclassified Exiguobacterium 0.00 1 1 S 360911 Exiguobacterium sp. AT1b 0.00 1 0 F 539003 Bacillales Family X. Incertae Sedis 0.00 1 0 G 1609627 Hydrogenibacillus 0.00 1 0 G1 2773237 unclassified Hydrogenibacillus 0.00 1 1 S 2866627 Hydrogenibacillus sp. N12 0.01 6 2 F 186824 Thermoactinomycetaceae 0.00 1 0 G 2023 Thermoactinomyces 0.00 1 1 S 2026 Thermoactinomyces vulgaris 0.00 1 0 G 292635 Laceyella 0.00 1 1 S 37482 Laceyella sacchari 0.00 1 0 G 1348505 Polycladomyces 0.00 1 1 S 1125966 Polycladomyces abyssicola 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 0.00 3 0 F 186821 Sporolactobacillaceae 0.00 3 0 G 2077 Sporolactobacillus 0.00 3 3 S 269673 Sporolactobacillus terrae 0.00 1 0 F 3076164 Abyssicoccaceae 0.00 1 0 G 1955413 Abyssicoccus 0.00 1 1 S 1817405 Abyssicoccus albus 15.20 16405 1181 O 186826 Lactobacillales 7.09 7653 5 F 81852 Enterococcaceae 6.79 7323 157 G 1350 Enterococcus 3.21 3468 3417 S 1351 Enterococcus faecalis 0.05 51 51 S1 1201292 Enterococcus faecalis ATCC 29212 3.02 3263 3242 S 1352 Enterococcus faecium 0.01 14 14 S1 1344042 Enterococcus faecium T110 0.00 5 5 S1 333849 Enterococcus faecium DO 0.00 2 2 S1 1328870 Enterococcus faecium UC7251 0.26 278 239 S 1354 Enterococcus hirae 0.04 39 39 S1 768486 Enterococcus hirae ATCC 9790 0.08 87 87 S 44008 Enterococcus cecorum 0.04 47 47 S 37734 Enterococcus casseliflavus 0.01 11 11 S 1353 Enterococcus gallinarum 0.01 11 11 S 118060 Enterococcus rotai 0.00 1 1 S 71452 Enterococcus raffinosus 0.29 316 1 G 51668 Tetragenococcus 0.29 312 312 S 51669 Tetragenococcus halophilus 0.00 3 3 S 526944 Tetragenococcus osmophilus 0.01 9 1 G 2737 Vagococcus 0.01 8 0 G1 2648499 unclassified Vagococcus 0.01 8 8 S 3109030 Vagococcus sp. B2T-5 3.77 4066 532 F 33958 Lactobacillaceae 0.70 752 1 G 2767842 Lactiplantibacillus 0.45 491 491 S 1589 Lactiplantibacillus pentosus 0.24 260 213 S 1590 Lactiplantibacillus plantarum 0.04 47 47 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.53 572 0 G 2930384 Periweissella 0.53 572 572 S 2506420 Periweissella cryptocerci 0.38 415 0 G 2767886 Levilactobacillus 0.33 355 355 S 1580 Levilactobacillus brevis 0.05 50 50 S 2292255 Levilactobacillus suantsaii 0.01 10 10 S 267363 Levilactobacillus zymae 0.35 383 379 G 2767893 Lentilactobacillus 0.00 3 3 S 1581 Lentilactobacillus buchneri 0.00 1 1 S 152331 Lentilactobacillus parabuchneri 0.33 354 99 G 1578 Lactobacillus 0.07 73 59 S 1579 Lactobacillus acidophilus 0.01 14 14 S1 272621 Lactobacillus acidophilus NCFM 0.07 71 71 S 1587 Lactobacillus helveticus 0.05 52 9 S 1584 Lactobacillus delbrueckii 0.02 24 1 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.02 20 20 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 3 3 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.01 14 14 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 5 0 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 5 5 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.03 36 2 G1 2620435 unclassified Lactobacillus 0.03 32 32 S 2695882 Lactobacillus sp. 3B(2020) 0.00 1 1 S 2983232 Lactobacillus sp. ESL0785 0.00 1 1 S 1545702 Lactobacillus sp. wkB8 0.01 12 12 S 47770 Lactobacillus crispatus 0.00 5 5 S 83683 Lactobacillus amylolyticus 0.00 3 3 S 109790 Lactobacillus jensenii 0.00 1 1 S 33959 Lactobacillus johnsonii 0.00 1 1 S 2269374 Lactobacillus terrae 0.00 1 1 S 2107999 Lactobacillus paragasseri 0.19 204 0 G 2759736 Lacticaseibacillus 0.14 150 123 S 1597 Lacticaseibacillus paracasei 0.03 27 27 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.03 34 34 S 3025672 Lacticaseibacillus pabuli 0.02 18 18 S 47715 Lacticaseibacillus rhamnosus 0.00 2 2 S 171523 Lacticaseibacillus pantheris 0.19 204 5 G 2767881 Fructilactobacillus 0.18 196 196 S 1625 Fructilactobacillus sanfranciscensis 0.00 3 3 S 1614 Fructilactobacillus fructivorans 0.15 159 22 G 2767887 Ligilactobacillus 0.05 51 51 S 1606 Ligilactobacillus aviarius 0.04 45 41 S 1624 Ligilactobacillus salivarius 0.00 4 4 S1 1194971 Ligilactobacillus salivarius str. Ren 0.02 19 19 S 89059 Ligilactobacillus acidipiscis 0.01 11 11 S 1605 Ligilactobacillus animalis 0.01 7 7 S 1601 Ligilactobacillus agilis 0.00 4 0 S 1622 Ligilactobacillus murinus 0.00 4 4 S1 1235801 Ligilactobacillus murinus ASF361 0.11 124 0 G 2742598 Limosilactobacillus 0.10 109 109 S 1598 Limosilactobacillus reuteri 0.01 11 11 S 1613 Limosilactobacillus fermentum 0.00 2 2 S 35787 Limosilactobacillus pontis 0.00 2 2 S 227942 Limosilactobacillus gastricus 0.09 93 75 G 2767877 Apilactobacillus 0.01 15 15 S 2923364 Apilactobacillus apisilvae 0.00 3 3 S 1218495 Apilactobacillus apinorum 0.06 60 0 G 2767874 Acetilactobacillus 0.06 60 60 S 1720083 Acetilactobacillus jinshanensis 0.05 53 0 G 2767885 Latilactobacillus 0.04 41 41 S 1599 Latilactobacillus sakei 0.01 12 12 S 28038 Latilactobacillus curvatus 0.04 41 30 G 1253 Pediococcus 0.01 6 6 S 1255 Pediococcus pentosaceus 0.00 4 4 S 51663 Pediococcus damnosus 0.00 1 0 G1 554805 unclassified Pediococcus 0.00 1 1 S 2962679 Pediococcus sp. AC40 0.03 35 26 G 46255 Weissella 0.00 5 5 S 137591 Weissella cibaria 0.00 3 3 S 1249 Weissella paramesenteroides 0.00 1 1 S 155866 Weissella soli 0.02 22 13 G 2767889 Loigolactobacillus 0.01 6 6 S 375175 Loigolactobacillus backii 0.00 3 3 S 1610 Loigolactobacillus coryniformis 0.02 17 16 G 1243 Leuconostoc 0.00 1 1 S 1246 Leuconostoc lactis 0.01 15 5 G 2767878 Bombilactobacillus 0.01 9 9 S 1303590 Bombilactobacillus bombi 0.00 1 1 S 2923363 Bombilactobacillus thymidiniphilus 0.01 8 1 G 2767879 Companilactobacillus 0.00 5 5 S 1847728 Companilactobacillus allii 0.00 1 0 S 1602 Companilactobacillus alimentarius 0.00 1 1 S1 1423720 Companilactobacillus alimentarius DSM 20249 0.00 1 1 S 938155 Companilactobacillus futsaii 0.01 8 0 G 2767888 Liquorilactobacillus 0.01 8 8 S 468911 Liquorilactobacillus hordei 0.01 7 0 G 2767884 Lapidilactobacillus 0.01 7 7 S 51664 Lapidilactobacillus dextrinicus 0.00 3 1 G 3118928 Xylocopilactobacillus 0.00 2 2 S 2932183 Xylocopilactobacillus apis 0.00 2 0 G 2767892 Secundilactobacillus 0.00 1 1 S 176292 Secundilactobacillus malefermentans 0.00 1 1 S 240427 Secundilactobacillus paracollinoides 0.00 1 0 G 2767876 Amylolactobacillus 0.00 1 0 S 1603 Amylolactobacillus amylophilus 0.00 1 1 S1 1423721 Amylolactobacillus amylophilus DSM 20533 = JCM 1125 0.00 1 1 G 2767890 Paucilactobacillus 0.00 1 0 G 2767891 Schleiferilactobacillus 0.00 1 1 S 304207 Schleiferilactobacillus harbinensis 2.45 2639 3 F 1300 Streptococcaceae 2.33 2515 1189 G 1301 Streptococcus 0.42 449 325 S 1308 Streptococcus thermophilus 0.08 81 81 S1 322159 Streptococcus thermophilus LMD-9 0.04 42 42 S1 767463 Streptococcus thermophilus ND03 0.00 1 1 S1 1435981 Streptococcus thermophilus 1F8CT 0.23 247 243 S 1314 Streptococcus pyogenes 0.00 4 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 4 4 S2 160491 Streptococcus pyogenes str. Manfredo 0.11 120 120 S 1811193 Streptococcus pantholopis 0.08 85 72 G1 2608887 unclassified Streptococcus 0.01 9 9 S 3098075 Streptococcus sp. S1 0.00 3 3 S 2664091 Streptococcus sp. zg-86 0.00 1 1 S 3028082 Streptococcus sp. 29896 0.07 78 41 S 1311 Streptococcus agalactiae 0.03 37 37 S1 1203670 Streptococcus agalactiae GD201008-001 0.06 65 65 S 1310 Streptococcus sobrinus 0.05 52 52 S 68892 Streptococcus infantis 0.04 39 39 S 1346 Streptococcus iniae 0.04 38 17 S 1313 Streptococcus pneumoniae 0.01 16 16 S1 869311 Streptococcus pneumoniae SPN032672 0.00 5 5 S1 1159083 Streptococcus pneumoniae PCS8235 0.03 34 34 S 1345 Streptococcus ferus 0.02 22 22 S 2490633 Streptococcus periodonticum 0.02 21 21 S 1335 Streptococcus equinus 0.01 14 14 S 1341 Streptococcus ratti 0.01 11 11 S 1304 Streptococcus salivarius 0.01 9 0 G1 119603 Streptococcus dysgalactiae group 0.01 6 5 S 1334 Streptococcus dysgalactiae 0.00 1 1 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 3 3 S 1336 Streptococcus equi 0.01 6 6 S 2021971 Streptococcus respiraculi 0.01 6 6 S 82348 Streptococcus pluranimalium 0.00 4 4 S 1309 Streptococcus mutans 0.00 4 4 S 59310 Streptococcus macedonicus 0.00 3 3 S 1111760 Streptococcus troglodytae 0.00 3 3 S 1307 Streptococcus suis 0.00 3 3 S 197614 Streptococcus pasteurianus 0.00 2 0 S 1303 Streptococcus oralis 0.00 2 2 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 2 0 G1 671232 Streptococcus anginosus group 0.00 1 1 S 1328 Streptococcus anginosus 0.00 1 1 S 1338 Streptococcus intermedius 0.00 2 2 S 102886 Streptococcus didelphis 0.00 1 1 S 2781599 Streptococcus oriscaviae 0.00 1 1 S 28037 Streptococcus mitis 0.00 1 1 S 1501662 Streptococcus parasuis 0.00 1 1 S 1326 Streptococcus acidominimus 0.00 1 1 S 1305 Streptococcus sanguinis 0.00 1 1 S 1348 Streptococcus parauberis 0.00 1 1 S 2173853 Streptococcus chenjunshii 0.11 121 49 G 1357 Lactococcus 0.05 58 58 S 1359 Lactococcus cremoris 0.01 10 0 S 1363 Lactococcus garvieae 0.01 10 10 S1 1890280 Lactococcus garvieae subsp. garvieae 0.00 4 4 S 1358 Lactococcus lactis 0.55 594 9 F 186827 Aerococcaceae 0.38 414 269 G 1375 Aerococcus 0.07 74 74 S 3078812 Aerococcus tenax 0.06 60 60 S 87541 Aerococcus christensenii 0.01 7 7 S 128944 Aerococcus urinaehominis 0.00 3 3 S 2976810 Aerococcus mictus 0.00 1 1 S 1376 Aerococcus urinae 0.14 147 0 G 2862144 Ruoffia 0.14 147 147 S 87458 Ruoffia tabacinasalis 0.01 10 0 G 89092 Ignavigranum 0.01 10 10 S 89093 Ignavigranum ruoffiae 0.01 9 0 G 66831 Facklamia 0.01 9 9 S 178214 Facklamia hominis 0.00 4 0 G 2761542 Fundicoccus 0.00 4 4 S 2969821 Fundicoccus culcitae 0.00 1 1 G 13075 Globicatella 0.25 272 49 F 186828 Carnobacteriaceae 0.07 78 0 G 117563 Granulicatella 0.05 55 55 S 46124 Granulicatella adiacens 0.02 23 23 S 137732 Granulicatella elegans 0.06 65 0 G 191769 Marinilactibacillus 0.06 65 0 G1 2632303 unclassified Marinilactibacillus 0.06 65 65 S 1911586 Marinilactibacillus sp. 15R 0.04 40 34 G 2747 Carnobacterium 0.01 6 4 S 2751 Carnobacterium maltaromaticum 0.00 2 2 S1 1234679 Carnobacterium maltaromaticum LMA28 0.03 36 0 G 82800 Desemzia 0.03 36 36 S 82801 Desemzia incerta 0.00 3 1 G 1470540 Jeotgalibaca 0.00 2 2 S 2496265 Jeotgalibaca ciconiae 0.00 1 0 G 29393 Dolosigranulum 0.00 1 1 S 29394 Dolosigranulum pigrum 0.38 405 0 C 909932 Negativicutes 0.35 377 0 O 1843489 Veillonellales 0.35 377 2 F 31977 Veillonellaceae 0.27 294 198 G 29465 Veillonella 0.07 72 72 S 29466 Veillonella parvula 0.02 17 17 S 423477 Veillonella rogosae 0.01 6 6 S 39777 Veillonella atypica 0.00 1 1 S 248315 Veillonella rodentium 0.07 77 3 G 906 Megasphaera 0.04 42 42 S 907 Megasphaera elsdenii 0.02 26 26 S 1675036 Megasphaera hexanoica 0.01 6 6 S 2144175 Megasphaera stantonii 0.00 4 4 G 39948 Dialister 0.03 27 0 O 909929 Selenomonadales 0.03 27 0 F 1843491 Selenomonadaceae 0.02 24 16 G 970 Selenomonas 0.01 7 1 G1 2637378 unclassified Selenomonas 0.00 3 3 S 3095337 Selenomonas sp. TAMA-11512 0.00 2 2 S 713030 Selenomonas sp. oral taxon 136 0.00 1 1 S 1884263 Selenomonas sp. oral taxon 920 0.00 1 1 S 69823 Selenomonas sputigena 0.00 3 0 G 864 Pectinatus 0.00 3 3 S 865 Pectinatus frisingensis 0.00 1 0 O 1843488 Acidaminococcales 0.00 1 0 F 909930 Acidaminococcaceae 0.00 1 0 G 904 Acidaminococcus 0.00 1 0 S 905 Acidaminococcus fermentans 0.00 1 1 S1 591001 Acidaminococcus fermentans DSM 20731 0.29 313 2 C 186801 Clostridia 0.13 142 23 O 186802 Eubacteriales 0.03 34 0 O1 538999 Eubacteriales incertae sedis 0.03 28 1 G 1686313 Fenollaria 0.03 27 27 S 938288 Fenollaria massiliensis 0.00 5 0 G 1392389 Intestinimonas 0.00 5 5 S 1297617 Intestinimonas butyriciproducens 0.00 1 0 F 543347 Clostridiales Family XVI. Incertae Sedis 0.00 1 0 G 178898 Carboxydocella 0.00 1 1 S 178899 Carboxydocella thermautotrophica 0.03 28 2 F 216572 Oscillospiraceae 0.01 11 0 G 2842531 Solibaculum 0.01 11 11 S 2780922 Solibaculum mannosilyticum 0.01 6 0 G 1263 Ruminococcus 0.00 5 5 S 2564099 Ruminococcus bovis 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.00 5 0 G 216851 Faecalibacterium 0.00 5 5 S 853 Faecalibacterium prausnitzii 0.00 2 0 G 35829 Acetivibrio 0.00 1 1 S 1515 Acetivibrio thermocellus 0.00 1 1 S 1677857 Acetivibrio saccincola 0.00 1 0 G 459786 Oscillibacter 0.00 1 1 S 2763056 Oscillibacter hominis 0.00 1 1 G 2834348 Caproicibacterium 0.02 19 15 F 31984 Heliobacteriaceae 0.00 4 0 G 79598 Heliorestis 0.00 4 4 S 356322 Heliorestis convoluta 0.02 17 1 F 31979 Clostridiaceae 0.01 16 3 G 1485 Clostridium 0.00 4 4 S 1502 Clostridium perfringens 0.00 3 0 G1 2614128 unclassified Clostridium 0.00 2 2 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 2483110 Clostridium sp. JN-1 0.00 2 2 S 36839 Clostridium felsineum 0.00 1 1 S 36845 Clostridium intestinale 0.00 1 0 S 1491 Clostridium botulinum 0.00 1 1 S1 1408283 Clostridium botulinum CDC_1436 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 1 S 1520 Clostridium beijerinckii 0.01 12 0 F 2867375 Desulfallaceae 0.01 12 0 G 2867376 Desulfoscipio 0.01 12 0 S 102134 Desulfoscipio gibsoniae 0.01 12 12 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 4 0 F 2937909 Desulfitobacteriaceae 0.00 2 1 G 79206 Desulfosporosinus 0.00 1 0 S 79209 Desulfosporosinus meridiei 0.00 1 1 S1 768704 Desulfosporosinus meridiei DSM 13257 0.00 1 0 G 36853 Desulfitobacterium 0.00 1 0 S 142877 Desulfitobacterium metallireducens 0.00 1 1 S1 871968 Desulfitobacterium metallireducens DSM 15288 0.00 1 1 G 56112 Dehalobacter 0.00 2 0 F 3046368 Aristaeellaceae 0.00 2 2 G 3046369 Aristaeella 0.00 1 1 F 3085642 Butyricicoccaceae 0.00 1 0 F 3082771 Acutalibacteraceae 0.00 1 1 G 1738645 Caproiciproducens 0.00 1 0 F 1491775 Proteinivoraceae 0.00 1 0 G 2838170 Alkalicella 0.00 1 1 S 2731377 Alkalicella caledoniensis 0.09 93 0 O 53433 Halanaerobiales 0.08 91 0 F 53434 Halobacteroidaceae 0.08 89 0 G 42417 Halobacteroides 0.08 89 0 S 42422 Halobacteroides halobius 0.08 89 89 S1 748449 Halobacteroides halobius DSM 5150 0.00 2 0 G 28186 Acetohalobium 0.00 2 0 S 28187 Acetohalobium arabaticum 0.00 2 2 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 2 0 O1 387655 Halanaerobiales incertae sedis 0.00 2 0 G 1769008 Anoxybacter 0.00 2 2 S 1323375 Anoxybacter fermentans 0.06 68 0 O 3085636 Lachnospirales 0.06 68 3 F 186803 Lachnospiraceae 0.02 22 0 G 1213720 Stomatobaculum 0.02 22 0 G1 2643635 unclassified Stomatobaculum 0.02 22 22 S 3059030 Stomatobaculum sp. F0698 0.01 15 0 G 2944193 Simiaoa 0.01 15 15 S 2763672 Simiaoa sunii 0.01 12 0 G 2383 Candidatus Epulonipiscium 0.01 12 12 S 420336 Candidatus Epulonipiscium viviparus 0.01 7 7 G 1164882 Lachnoanaerobaculum 0.00 3 0 G 572511 Blautia 0.00 2 0 G1 2648079 unclassified Blautia 0.00 2 2 S 2479767 Blautia sp. SC05B48 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 2 0 G 1506553 Lachnoclostridium 0.00 2 2 S 1512 [Clostridium] symbiosum 0.00 1 0 G 2316020 Mediterraneibacter 0.00 1 1 S 33038 Mediterraneibacter gnavus 0.00 1 1 G 2719313 Enterocloster 0.00 1 0 G 2997360 Anaeropeptidivorans 0.00 1 1 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 0 G 28050 Lachnospira 0.00 1 1 S 39485 Lachnospira eligens 0.00 5 0 O 3082720 Peptostreptococcales 0.00 5 1 F 186804 Peptostreptococcaceae 0.00 3 0 G 1870884 Clostridioides 0.00 3 3 S 1496 Clostridioides difficile 0.00 1 0 G 1505657 Intestinibacter 0.00 1 1 S 261299 Intestinibacter bartlettii 0.00 2 0 O 68295 Thermoanaerobacterales 0.00 2 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 2 0 G 252965 Mahella 0.00 2 0 S 252966 Mahella australiensis 0.00 2 2 S1 697281 Mahella australiensis 50-1 BON 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039168 Moorellaceae 0.00 1 0 G 202949 Thermanaeromonas 0.00 1 0 S 161154 Thermanaeromonas toyohensis 0.00 1 1 S1 698762 Thermanaeromonas toyohensis ToBE 0.17 184 0 C 1737404 Tissierellia 0.15 166 0 O 1737405 Tissierellales 0.15 158 0 F 1570339 Peptoniphilaceae 0.06 68 3 G 162289 Peptoniphilus 0.04 46 46 S 54006 Peptoniphilus ivorii 0.01 11 11 S 54005 Peptoniphilus harei 0.01 6 6 S 3036303 Peptoniphilus genitalis 0.00 2 2 S 3016343 Peptoniphilus equinus 0.04 47 5 G 165779 Anaerococcus 0.03 34 0 S 33034 Anaerococcus prevotii 0.03 34 34 S1 525919 Anaerococcus prevotii DSM 20548 0.00 4 4 S 1755241 Anaerococcus nagyae 0.00 4 0 G1 2614126 unclassified Anaerococcus 0.00 4 4 S 3036300 Anaerococcus sp. Marseille-Q7828 0.02 22 0 G 150022 Finegoldia 0.02 22 22 S 1260 Finegoldia magna 0.02 18 0 G 31983 Helcococcus 0.02 18 18 S 72026 Helcococcus ovis 0.00 2 0 G 1161127 Murdochiella 0.00 2 2 S 1852373 Murdochiella vaginalis 0.00 1 0 G 543311 Parvimonas 0.00 1 1 S 33033 Parvimonas micra 0.01 7 0 F 2992719 Tepidimicrobiaceae 0.00 4 0 G 1354809 Keratinibaculum 0.00 4 4 S 1278232 Keratinibaculum paraultunense 0.00 3 0 G 2794837 Schnuerera 0.00 3 0 S 45497 Schnuerera ultunensis 0.00 3 3 S1 1288971 [Clostridium] ultunense Esp 0.00 1 1 F 1737406 Tissierellaceae 0.02 18 0 C1 1737407 Tissierellia incertae sedis 0.02 18 0 G 1582879 Ezakiella 0.02 18 18 S 46507 Ezakiella coagulans 0.02 20 0 C 526524 Erysipelotrichia 0.02 20 0 O 526525 Erysipelotrichales 0.01 10 0 F 128827 Erysipelotrichaceae 0.01 6 0 G 1647 Erysipelothrix 0.00 5 5 S 1648 Erysipelothrix rhusiopathiae 0.00 1 1 S 2485784 Erysipelothrix piscisicarius 0.00 2 0 G 174708 Allobaculum 0.00 2 2 S 2834459 Allobaculum mucilyticum 0.00 1 0 G 2749267 Amedibacterium 0.00 1 1 S 2583452 Amedibacterium intestinale 0.00 1 0 G 3059504 Allocoprobacillus 0.00 1 1 S 2944914 Allocoprobacillus halotolerans 0.01 7 0 F 2810280 Coprobacillaceae 0.01 6 0 G 135858 Catenibacterium 0.00 5 0 G1 2643636 unclassified Catenibacterium 0.00 5 5 S 2478954 Catenibacterium sp. co_0103 0.00 1 1 S 100886 Catenibacterium mitsuokai 0.00 1 0 G 2943184 Tannockella 0.00 1 1 S 2899121 Tannockella kyphosi 0.00 3 0 F 2810281 Turicibacteraceae 0.00 3 3 G 191303 Turicibacter 1.93 2083 1 P 201174 Actinomycetota 1.91 2058 22 C 1760 Actinomycetes 0.96 1037 1 O 85009 Propionibacteriales 0.96 1031 34 F 31957 Propionibacteriaceae 0.91 977 10 G 1912216 Cutibacterium 0.84 908 907 S 1747 Cutibacterium acnes 0.00 1 1 S1 1734925 Cutibacterium acnes subsp. acnes 0.05 59 59 S 33011 Cutibacterium granulosum 0.01 6 2 G 72763 Tessaracoccus 0.00 4 4 S 1285901 Tessaracoccus defluvii 0.00 5 1 G 2801844 Arachnia 0.00 4 4 S 1750 Arachnia propionica 0.00 3 0 G 1085622 Propioniciclava 0.00 3 0 G1 2642922 unclassified Propioniciclava 0.00 3 3 S 2760308 Propioniciclava sp. MC1595 0.00 2 0 G 1912215 Acidipropionibacterium 0.00 2 2 S 1749 Acidipropionibacterium jensenii 0.00 1 0 G 1743 Propionibacterium 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.00 1 1 G 29404 Microlunatus 0.00 1 0 G 369926 Brooklawnia 0.00 1 1 S 3041175 Brooklawnia propionicigenes 0.00 1 1 G 1911549 Raineyella 0.00 4 0 F 85015 Nocardioidaceae 0.00 4 0 G 3024237 Solicola 0.00 4 4 S 2908642 Solicola gregarius 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 2903578 Kribbella sp. NBC_01245 0.34 369 0 O 85007 Mycobacteriales 0.30 327 0 F 1653 Corynebacteriaceae 0.30 327 199 G 1716 Corynebacterium 0.02 21 21 S 53374 Corynebacterium coyleae 0.01 16 16 S 43768 Corynebacterium matruchotii 0.01 10 10 S 187491 Corynebacterium glaucum 0.01 9 9 S 38289 Corynebacterium jeikeium 0.01 8 8 S 43765 Corynebacterium amycolatum 0.01 7 7 S 679663 Corynebacterium canis 0.00 5 5 S 598660 Corynebacterium pyruviciproducens 0.00 5 5 S 2080740 Corynebacterium yudongzhengii 0.00 5 5 S 161895 Corynebacterium phocae 0.00 5 5 S 108486 Corynebacterium falsenii 0.00 5 0 G1 2624378 unclassified Corynebacterium 0.00 2 2 S 1487956 Corynebacterium sp. ATCC 6931 0.00 2 2 S 2599641 Corynebacterium sp. sy039 0.00 1 1 S 3062461 Corynebacterium sp. BD556 0.00 4 4 S 1758466 Corynebacterium faecale 0.00 4 1 S 1718 Corynebacterium glutamicum 0.00 3 3 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 3 3 S 38284 Corynebacterium accolens 0.00 3 3 S 1719 Corynebacterium pseudotuberculosis 0.00 3 0 S 441501 Corynebacterium massiliense 0.00 3 3 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 2 2 S 35757 Corynebacterium cystitidis 0.00 2 2 S 2055947 Corynebacterium heidelbergense 0.00 2 2 S 2709394 Corynebacterium lizhenjunii 0.00 1 1 S 1414719 Corynebacterium jeddahense 0.00 1 1 S 3049799 Corynebacterium breve 0.00 1 1 S 61592 Corynebacterium durum 0.00 1 1 S 39791 Corynebacterium glucuronolyticum 0.00 1 0 S 575200 Corynebacterium maris 0.00 1 1 S1 1224163 Corynebacterium maris DSM 45190 0.00 1 0 S 1230998 Corynebacterium frankenforstense 0.00 1 1 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.00 1 1 S 38301 Corynebacterium minutissimum 0.00 1 1 S 38290 Corynebacterium macginleyi 0.00 1 1 S 35755 Corynebacterium kutscheri 0.02 21 0 F 85025 Nocardiaceae 0.02 18 15 G 1827 Rhodococcus 0.00 2 0 G1 2840174 Rhodococcus erythropolis group 0.00 2 2 S 334542 Rhodococcus qingshengii 0.00 1 1 S 38310 Rhodococcus coprophilus 0.00 3 0 G 1817 Nocardia 0.00 3 3 S 2755382 Nocardia huaxiensis 0.01 13 0 F 2805586 Lawsonellaceae 0.01 13 0 G 1847725 Lawsonella 0.01 13 13 S 1528099 Lawsonella clevelandensis 0.00 4 0 F 1762 Mycobacteriaceae 0.00 2 2 G 1763 Mycobacterium 0.00 2 0 G 1866885 Mycolicibacterium 0.00 2 2 S 1286180 Mycolicibacterium sediminis 0.00 2 0 F 85029 Dietziaceae 0.00 2 0 G 37914 Dietzia 0.00 2 2 S 139021 Dietzia psychralcaliphila 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 84595 Gordonia polyisoprenivorans 0.00 1 0 F 3040680 Hoyosellaceae 0.00 1 0 G 697025 Hoyosella 0.00 1 0 S 639313 Hoyosella subflava 0.00 1 1 S1 443218 Hoyosella subflava DQS3-9A1 0.31 331 4 O 85006 Micrococcales 0.23 245 3 F 1268 Micrococcaceae 0.19 207 14 G 32207 Rothia 0.08 84 83 S 43675 Rothia mucilaginosa 0.00 1 1 S1 680646 Rothia mucilaginosa DY-18 0.08 82 82 S 2047 Rothia dentocariosa 0.02 23 23 S 172042 Rothia aeria 0.00 4 4 S 37923 Rothia kristinae 0.01 13 9 G 57493 Kocuria 0.00 4 4 S 71999 Kocuria palustris 0.01 10 1 G 1742989 Glutamicibacter 0.01 9 0 G1 2627139 unclassified Glutamicibacter 0.01 9 9 S 1155384 Glutamicibacter sp. ZJUTW 0.01 9 9 G 1269 Micrococcus 0.00 1 1 G 1663 Arthrobacter 0.00 1 1 G 57494 Nesterenkonia 0.00 1 1 G 1160973 Auritidibacter 0.03 31 0 F 2805591 Tropherymataceae 0.03 31 0 G 2038 Tropheryma 0.03 31 31 S 2039 Tropheryma whipplei 0.01 16 2 F 85020 Dermabacteraceae 0.01 12 0 G 36739 Dermabacter 0.01 12 12 S 1667168 Dermabacter jinjuensis 0.00 2 0 G 43668 Brachybacterium 0.00 2 1 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 1903186 Brachybacterium sp. P6-10-X1 0.01 14 0 F 85019 Brevibacteriaceae 0.01 14 3 G 1696 Brevibacterium 0.01 10 0 G1 2614124 unclassified Brevibacterium 0.01 7 7 S 2999062 Brevibacterium sp. BRM-1 0.00 3 3 S 2575923 Brevibacterium sp. CS2 0.00 1 1 S 273384 Brevibacterium aurantiacum 0.01 8 0 F 125316 Beutenbergiaceae 0.01 8 0 G 947525 Miniimonas 0.01 8 0 G1 2626367 unclassified Miniimonas 0.01 8 8 S 2171623 Miniimonas sp. S16 0.01 8 4 F 85023 Microbacteriaceae 0.00 2 0 G 447237 Frondihabitans 0.00 2 0 G1 2626248 unclassified Frondihabitans 0.00 2 2 S 1446794 Frondihabitans sp. 762G35 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2495430 Curtobacterium sp. Csp2 0.00 1 1 G 33877 Agromyces 0.00 3 0 F 2805590 Ornithinimicrobiaceae 0.00 3 3 G 125287 Ornithinimicrobium 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 1 G 186188 Xylanimonas 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 0 G 162491 Oerskovia 0.00 1 0 G1 2619021 unclassified Oerskovia 0.00 1 1 S 1179673 Oerskovia sp. KBS0722 0.13 139 0 O 2037 Actinomycetales 0.13 139 2 F 2049 Actinomycetaceae 0.11 120 48 G 1654 Actinomyces 0.05 51 51 S 1288391 Actinomyces timonensis 0.01 16 12 G1 2609248 unclassified Actinomyces 0.00 2 2 S 712122 Actinomyces sp. oral taxon 414 0.00 2 2 S 1851395 Actinomyces sp. Chiba101 0.00 3 3 S 461393 Actinomyces massiliensis 0.00 1 1 S 2763540 Actinomyces trachealis 0.00 1 1 S 52771 Actinomyces howellii 0.01 15 10 G 2529408 Schaalia 0.00 3 3 S 1660 Schaalia odontolytica 0.00 1 1 S 52773 Schaalia meyeri 0.00 1 1 S 131110 Schaalia radingae 0.00 1 0 G 184869 Varibaculum 0.00 1 1 S 2811781 Varibaculum prostatecancerukia 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.07 79 0 O 85011 Kitasatosporales 0.07 79 0 F 2062 Streptomycetaceae 0.07 78 3 G 1883 Streptomyces 0.04 48 0 G1 2593676 unclassified Streptomyces 0.03 28 28 S 2099584 Streptomyces sp. ICC4 0.01 7 7 S 2907545 Streptomyces sp. GQFP 0.00 2 2 S 3075198 Streptomyces sp. ITFR-16 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 3075825 Streptomyces sp. AM8-1-1 0.00 1 1 S 2903818 Streptomyces sp. NBC_01304 0.00 1 1 S 3028711 Streptomyces sp. AM 3-1-1 0.00 1 1 S 2594460 Streptomyces sp. S1A1-8 0.00 1 1 S 2903645 Streptomyces sp. NBC_00310 0.00 1 1 S 2975847 Streptomyces sp. NBC_00841 0.00 1 1 S 2750011 Streptomyces sp. Rer75 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2136401 Streptomyces sp. YIM 121038 0.00 1 1 S 2903860 Streptomyces sp. NBC_01423 0.01 12 0 G1 1477431 Streptomyces albidoflavus group 0.01 12 12 S 1886 Streptomyces albidoflavus 0.00 3 3 S 2867410 Streptomyces profundus 0.00 2 0 S 285530 Streptomyces sviceus 0.00 2 2 S1 463191 Streptomyces sviceus ATCC 29083 0.00 2 2 S 2508722 Streptomyces roseicoloratus 0.00 1 0 S 38300 Streptomyces pristinaespiralis 0.00 1 1 S1 457429 Streptomyces pristinaespiralis ATCC 25486 0.00 1 1 S 35621 Streptomyces mobaraensis 0.00 1 1 S 68214 Streptomyces griseochromogenes 0.00 1 1 S 2710756 Streptomyces bathyalis 0.00 1 1 S 424188 Streptomyces deccanensis 0.00 1 1 S 1077946 Streptomyces hundungensis 0.00 1 1 S 1961 Streptomyces virginiae 0.00 1 0 S 1916 Streptomyces lividans 0.00 1 1 S1 1200984 Streptomyces lividans 1326 0.00 1 0 G 228398 Streptacidiphilus 0.00 1 0 G1 2643834 unclassified Streptacidiphilus 0.00 1 1 S 2705012 Streptacidiphilus sp. PB12-B1b 0.05 59 0 O 85004 Bifidobacteriales 0.05 59 2 F 31953 Bifidobacteriaceae 0.05 57 37 G 1678 Bifidobacterium 0.01 13 1 S 216816 Bifidobacterium longum 0.01 7 7 S1 1682 Bifidobacterium longum subsp. infantis 0.00 3 3 S1 1679 Bifidobacterium longum subsp. longum 0.00 2 2 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 2 2 S 28026 Bifidobacterium pseudocatenulatum 0.00 1 0 G1 2608897 unclassified Bifidobacterium 0.00 1 1 S 2983229 Bifidobacterium sp. ESL0769 0.00 1 1 S 1683 Bifidobacterium angulatum 0.00 1 1 S 1685 Bifidobacterium breve 0.00 1 0 S 1694 Bifidobacterium pseudolongum 0.00 1 1 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.00 1 0 S 28025 Bifidobacterium animalis 0.00 1 0 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 1 1 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.01 9 0 O 85010 Pseudonocardiales 0.01 9 7 F 2070 Pseudonocardiaceae 0.00 2 0 G 1813 Amycolatopsis 0.00 2 0 G1 2618356 unclassified Amycolatopsis 0.00 2 2 S 2745196 Amycolatopsis sp. CA-230715 0.00 5 0 O 85008 Micromonosporales 0.00 5 2 F 28056 Micromonosporaceae 0.00 3 0 G 1873 Micromonospora 0.00 1 0 G1 2617518 unclassified Micromonospora 0.00 1 1 S 3018339 Micromonospora sp. LH3U1 0.00 1 1 S 291594 Micromonospora rifamycinica 0.00 1 1 S 1420889 Micromonospora profundi 0.00 3 0 O 1643682 Geodermatophilales 0.00 3 0 F 85030 Geodermatophilaceae 0.00 2 0 G 1860 Geodermatophilus 0.00 1 0 S 1861 Geodermatophilus obscurus 0.00 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.00 1 0 G1 2637632 unclassified Geodermatophilus 0.00 1 1 S 1528104 Geodermatophilus sp. DSM 44513 0.00 1 0 G 38501 Blastococcus 0.00 1 1 S 1564165 Blastococcus brunescens 0.00 2 0 O 85012 Streptosporangiales 0.00 2 0 F 2012 Thermomonosporaceae 0.00 1 1 G 1988 Actinomadura 0.00 1 0 G 58122 Spirillospora 0.00 1 0 G1 2642701 unclassified Spirillospora 0.00 1 1 S 2976007 Spirillospora sp. NBC_01491 0.00 2 0 O 85013 Frankiales 0.00 2 0 F 74712 Frankiaceae 0.00 2 0 G 1854 Frankia 0.00 2 2 S 106370 Frankia casuarinae 0.00 1 0 O 2039638 Candidatus Nanopelagicales 0.00 1 0 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884913 Candidatus Planktophila lacus 0.02 20 0 C 84998 Coriobacteriia 0.01 12 0 O 84999 Coriobacteriales 0.01 8 2 F 1643824 Atopobiaceae 0.00 4 0 G 2767353 Lancefieldella 0.00 3 0 S 1382 Lancefieldella parvula 0.00 3 3 S1 521095 Lancefieldella parvula DSM 20469 0.00 1 0 G1 2978947 unclassified Lancefieldella 0.00 1 1 S 3022127 Lancefieldella sp. Marseille-Q7238 0.00 2 0 G 1380 Atopobium 0.00 2 0 G1 2643817 unclassified Atopobium 0.00 2 2 S 712157 Atopobium sp. oral taxon 416 0.00 4 0 F 84107 Coriobacteriaceae 0.00 3 0 G 102106 Collinsella 0.00 3 3 S 74426 Collinsella aerofaciens 0.00 1 0 G 33870 Coriobacterium 0.00 1 0 S 33871 Coriobacterium glomerans 0.00 1 1 S1 700015 Coriobacterium glomerans PW2 0.01 8 0 O 1643822 Eggerthellales 0.01 8 2 F 1643826 Eggerthellaceae 0.00 5 0 G 1926677 Raoultibacter 0.00 5 5 S 1907662 Raoultibacter timonensis 0.00 1 1 G 447020 Adlercreutzia 0.00 2 0 C 84995 Rubrobacteria 0.00 2 0 O 84996 Rubrobacterales 0.00 2 0 F 84997 Rubrobacteraceae 0.00 2 2 G 42255 Rubrobacter 0.00 1 0 C 84992 Acidimicrobiia 0.00 1 0 O 84993 Acidimicrobiales 0.00 1 0 F 633392 Iamiaceae 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 908621 Euzebyales 0.00 1 0 F 908622 Euzebyaceae 0.00 1 0 G 908623 Euzebya 0.00 1 1 S 1608957 Euzebya pacifica 0.20 220 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.20 220 8 P 1117 Cyanobacteriota 0.20 212 30 C 3028117 Cyanophyceae 0.10 113 0 C1 1301283 Oscillatoriophycideae 0.09 100 0 O 1150 Oscillatoriales 0.08 86 0 F 2934961 Sirenicapillariaceae 0.08 86 0 G 2596745 Limnospira 0.08 86 0 S 147322 Limnospira indica 0.08 85 85 S1 2760438 Limnospira indica BM01 0.00 1 1 S1 376219 Limnospira indica PCC 8005 0.01 8 0 F 1892252 Microcoleaceae 0.01 8 8 G 54304 Planktothrix 0.01 6 0 F 1892254 Oscillatoriaceae 0.01 6 0 G 1198 Phormidium 0.01 6 0 S 2974039 Phormidium yuhuli 0.01 6 6 S1 2940671 Phormidium yuhuli AB48 0.01 13 1 O 1118 Chroococcales 0.01 8 0 F 1890449 Microcystaceae 0.01 8 0 G 1125 Microcystis 0.01 8 0 G1 2643300 unclassified Microcystis 0.01 8 8 S 1967666 Microcystis sp. MC19 0.00 4 0 F 1890450 Aphanothecaceae 0.00 4 0 G 1453359 Candidatus Atelocyanobacterium 0.00 4 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.00 4 4 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.03 35 0 O 1955042 Gloeomargaritales 0.03 35 0 F 1955043 Gloeomargaritaceae 0.03 35 0 G 1188227 Gloeomargarita 0.03 35 0 S 1188228 Gloeomargarita lithophora 0.03 35 35 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.01 15 0 O 1161 Nostocales 0.01 7 3 F 1162 Nostocaceae 0.00 3 1 G 1177 Nostoc 0.00 2 0 S 264686 Nostoc edaphicum 0.00 2 2 S1 1472755 Nostoc edaphicum CCNP1411 0.00 1 0 G 1163 Anabaena 0.00 1 0 S 1165 Anabaena cylindrica 0.00 1 1 S1 272123 Anabaena cylindrica PCC 7122 0.01 6 1 F 1892259 Aphanizomenonaceae 0.00 3 0 G 748770 Dolichospermum 0.00 3 0 S 136073 Dolichospermum compactum 0.00 3 3 S1 1973481 Dolichospermum compactum NIES-806 0.00 2 0 G 752201 Sphaerospermopsis 0.00 2 0 S 984207 Sphaerospermopsis torques-reginae 0.00 2 2 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 1 0 F 1185 Rivulariaceae 0.00 1 0 G 373984 Rivularia 0.00 1 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 1 1 S 373994 Rivularia sp. PCC 7116 0.00 1 0 F 2661849 Calotrichaceae 0.00 1 0 G 1186 Calothrix 0.00 1 0 G1 2619626 unclassified Calothrix 0.00 1 1 S 2005462 Calothrix sp. NIES-3974 0.01 11 0 O 1890424 Synechococcales 0.01 9 0 F 1890426 Synechococcaceae 0.01 9 0 G 1129 Synechococcus 0.01 7 1 G1 2626047 unclassified Synechococcus 0.00 5 5 S 195250 Synechococcus sp. PCC 7336 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 2 2 S 32046 Synechococcus elongatus 0.00 1 0 F 1890428 Merismopediaceae 0.00 1 0 G 1142 Synechocystis 0.00 1 0 G1 2640012 unclassified Synechocystis 0.00 1 1 S 3144951 Synechocystis sp. LKSZ1 0.00 1 0 F 2881426 Prochlorococcaceae 0.00 1 0 G 1218 Prochlorococcus 0.00 1 0 S 1219 Prochlorococcus marinus 0.00 1 1 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.00 2 2 O 307595 Gloeobacterales 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 1890505 Chroococcidiopsidales 0.00 1 0 F 1890528 Chroococcidiopsidaceae 0.00 1 1 G 54298 Chroococcidiopsis 0.00 1 0 O 2881377 Pseudanabaenales 0.00 1 0 F 1890436 Pseudanabaenaceae 0.00 1 0 G 1152 Pseudanabaena 0.00 1 0 G1 2593292 unclassified Pseudanabaena 0.00 1 1 S 82654 Pseudanabaena sp. PCC 7367 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 1 G 155977 Acaryochloris 0.00 1 0 O 3079757 Gomontiellales 0.00 1 0 F 1890431 Chamaesiphonaceae 0.00 1 0 G 217161 Chamaesiphon 0.00 1 0 S 1173032 Chamaesiphon minutus 0.00 1 1 S1 1173020 Chamaesiphon minutus PCC 6605 0.08 91 34 P 544448 Mycoplasmatota 0.03 29 0 C 31969 Mollicutes 0.02 25 0 O 2085 Mycoplasmatales 0.02 20 0 F 2092 Mycoplasmataceae 0.02 20 0 G 2093 Mycoplasma 0.01 14 2 G1 2683645 unclassified Mycoplasma 0.01 8 8 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 3 3 S 2801918 Mycoplasma sp. E35C 0.00 1 1 S 2967302 Mycoplasma sp. 1018B 0.01 6 0 G1 656088 Mycoplasma mycoides group 0.00 4 4 S 1179777 Mycoplasma feriruminatoris 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 4 0 O1 1665628 unclassified Mycoplasmatales 0.00 4 4 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 1 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 1 0 G 295595 Candidatus Hepatoplasma 0.00 1 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 1 1 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.00 3 0 O 186328 Entomoplasmatales 0.00 3 0 F 2131 Spiroplasmataceae 0.00 3 3 G 2132 Spiroplasma 0.00 1 0 O 186329 Acholeplasmatales 0.00 1 0 F 2146 Acholeplasmataceae 0.00 1 0 G 2147 Acholeplasma 0.00 1 1 S 2148 Acholeplasma laidlawii 0.03 28 0 O 2790996 Mycoplasmoidales 0.02 19 0 F 2895623 Metamycoplasmataceae 0.02 17 0 G 2767358 Mycoplasmopsis 0.01 14 14 S 55603 Mycoplasmopsis caviae 0.00 2 2 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 2113 Mycoplasmopsis californica 0.00 1 1 G 2895509 Metamycoplasma 0.00 1 1 G 2923352 Mesomycoplasma 0.01 9 0 F 2790998 Mycoplasmoidaceae 0.01 8 7 G 2995234 Mycoplasmoides 0.00 1 1 S 92758 Mycoplasmoides fastidiosum 0.00 1 0 G 2791001 Malacoplasma 0.00 1 0 S 28227 Malacoplasma penetrans 0.00 1 1 S1 272633 Malacoplasma penetrans HF-2 0.03 33 0 P 200795 Chloroflexota 0.01 15 0 C 388447 Ktedonobacteria 0.01 15 0 O 388448 Ktedonobacterales 0.01 15 0 F 2692416 Ktedonosporobacteraceae 0.01 15 0 G 2692417 Ktedonosporobacter 0.01 15 15 S 2509675 Ktedonosporobacter rubrisoli 0.01 6 0 C 292625 Anaerolineae 0.01 6 0 O 292629 Anaerolineales 0.01 6 1 F 292628 Anaerolineaceae 0.00 3 0 G 233189 Anaerolinea 0.00 3 0 S 167964 Anaerolinea thermophila 0.00 3 3 S1 926569 Anaerolinea thermophila UNI-1 0.00 2 0 G 1649478 Pelolinea 0.00 2 2 S 913107 Pelolinea submarina 0.00 5 0 C 32061 Chloroflexia 0.00 5 1 O 32064 Chloroflexales 0.00 4 0 O1 1508594 Chloroflexineae 0.00 4 0 F 1106 Chloroflexaceae 0.00 4 0 G 1107 Chloroflexus 0.00 4 0 S 152260 Chloroflexus aggregans 0.00 4 4 S1 326427 Chloroflexus aggregans DSM 9485 0.00 3 0 C 1382928 Ardenticatenia 0.00 3 0 O 3085098 Candidatus Promineifilales 0.00 3 0 F 3085097 Candidatus Promineifilaceae 0.00 3 0 G 1988031 Candidatus Promineifilum 0.00 3 3 S 1806508 Candidatus Promineifilum breve 0.00 1 0 P1 167963 Chloroflexota incertae sedis 0.00 1 0 G 262406 Thermobaculum 0.00 1 0 S 166501 Thermobaculum terrenum 0.00 1 1 S1 525904 Thermobaculum terrenum ATCC BAA-798 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 670486 Dehalogenimonas 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.02 17 0 P 67819 Armatimonadota 0.01 16 0 C 1077257 Chthonomonadia 0.01 16 0 O 1077263 Chthonomonadales 0.01 16 0 F 1077264 Chthonomonadaceae 0.01 16 0 G 1077265 Chthonomonas 0.01 16 0 S 454171 Chthonomonas calidirosea 0.01 16 16 S1 1303518 Chthonomonas calidirosea T49 0.00 1 0 C 1663419 Fimbriimonadia 0.00 1 0 O 1663425 Fimbriimonadales 0.00 1 0 F 1663426 Fimbriimonadaceae 0.00 1 0 G 1005038 Fimbriimonas 0.00 1 0 S 1005039 Fimbriimonas ginsengisoli 0.00 1 1 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.00 2 0 P 1297 Deinococcota 0.00 2 0 C 188787 Deinococci 0.00 2 0 O 118964 Deinococcales 0.00 2 0 F 183710 Deinococcaceae 0.00 2 0 G 1298 Deinococcus 0.00 1 1 S 32062 Deinococcus radiophilus 0.00 1 0 S 432329 Deinococcus peraridilitoris 0.00 1 1 S1 937777 Deinococcus peraridilitoris DSM 19664 35.56 38376 142 P 1224 Pseudomonadota 28.65 30919 1327 C 1236 Gammaproteobacteria 9.37 10117 0 O 135614 Lysobacterales 9.37 10113 1 F 32033 Lysobacteraceae 9.34 10081 0 G 338 Xanthomonas 9.34 10077 10077 S 29447 Xanthomonas albilineans 0.00 3 0 G1 643453 Xanthomonas citri group 0.00 3 3 S 346 Xanthomonas citri 0.00 1 0 G1 2643310 unclassified Xanthomonas 0.00 1 1 S 2971235 Xanthomonas sp. CFBP 8443 0.02 23 17 G 40323 Stenotrophomonas 0.01 6 0 G1 995085 Stenotrophomonas maltophilia group 0.01 6 6 S 40324 Stenotrophomonas maltophilia 0.01 7 0 G 141948 Thermomonas 0.01 7 0 G1 2633315 unclassified Thermomonas 0.01 7 7 S 2771436 Thermomonas sp. XSG 0.00 1 1 G 68 Lysobacter 0.00 4 3 F 1775411 Rhodanobacteraceae 0.00 1 1 G 75309 Rhodanobacter 9.18 9912 633 O 91347 Enterobacterales 4.10 4421 485 F 543 Enterobacteriaceae 1.46 1580 14 G 561 Escherichia 1.44 1550 1447 S 562 Escherichia coli 0.03 29 29 S1 1322345 Escherichia coli ATCC 25922 0.02 23 23 S1 316435 Escherichia coli Nissle 1917 0.01 15 15 S1 331112 Escherichia coli HS 0.01 12 12 S1 2079157 Escherichia coli O2:H1 0.01 6 6 S1 2874053 Escherichia coli O25:H1 0.00 5 1 S1 83334 Escherichia coli O157:H7 0.00 3 3 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 1 S2 1328859 Escherichia coli O157:H7 str. SS17 0.00 4 4 S1 1446600 Escherichia coli O15:H18 0.00 4 4 S1 244320 Escherichia coli O55:H7 0.00 2 0 S1 1072458 Escherichia coli O7:K1 0.00 2 2 S2 1072459 Escherichia coli O7:K1 str. CE10 0.00 2 2 S1 362663 Escherichia coli 536 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.01 13 13 S 208962 Escherichia albertii 0.00 2 0 G1 2608889 unclassified Escherichia 0.00 2 2 S 2509664 Escherichia sp. HH154_1D 0.00 1 1 S 1499973 Escherichia marmotae 0.54 582 0 G 547 Enterobacter 0.53 572 1 G1 354276 Enterobacter cloacae complex 0.24 259 259 S 299767 Enterobacter ludwigii 0.19 201 200 S 158836 Enterobacter hormaechei 0.00 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.09 97 97 S 208224 Enterobacter kobei 0.01 7 2 S 550 Enterobacter cloacae 0.00 5 5 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 5 5 S 1812935 Enterobacter roggenkampii 0.00 2 2 S 61645 Enterobacter asburiae 0.01 9 9 S 881260 Enterobacter bugandensis 0.00 1 1 S 539813 Enterobacter mori 0.51 547 22 G 590 Salmonella 0.48 519 89 S 28901 Salmonella enterica 0.40 430 27 S1 59201 Salmonella enterica subsp. enterica 0.09 98 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.06 61 61 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.03 37 37 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.06 70 70 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.06 65 65 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.05 53 53 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.04 46 3 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.03 33 33 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.01 10 10 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 13 13 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.01 12 8 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 3 3 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 1 1 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.01 9 9 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.01 6 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.01 6 6 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.01 6 6 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.01 6 6 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 5 5 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 5 5 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 3 3 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 2 2 S2 28147 Salmonella enterica subsp. enterica serovar Oranienburg 0.00 2 2 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 1 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.01 6 0 S 54736 Salmonella bongori 0.01 6 6 S1 1299282 Salmonella bongori CFSAN000510 0.40 434 0 F1 2890311 Klebsiella/Raoultella group 0.40 432 9 G 570 Klebsiella 0.33 361 280 S 573 Klebsiella pneumoniae 0.07 76 76 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 5 5 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.03 27 27 S 548 Klebsiella aerogenes 0.02 21 9 S 1463165 Klebsiella quasipneumoniae 0.01 12 12 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 6 6 S 1134687 Klebsiella michiganensis 0.00 4 0 G1 2608929 unclassified Klebsiella 0.00 3 3 S 2851540 Klebsiella sp. PL-2018 0.00 1 1 S 2829835 Klebsiella sp. P1954 0.00 2 1 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S 1259973 Klebsiella electrica 0.00 1 1 S 2153354 Klebsiella huaxiensis 0.00 2 0 G 160674 Raoultella 0.00 1 1 S 575 Raoultella planticola 0.00 1 1 S 54291 Raoultella ornithinolytica 0.31 333 317 F1 36866 unclassified Enterobacteriaceae 0.01 15 15 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 1 1 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.08 84 0 F1 191675 Enterobacteriaceae incertae sedis 0.08 84 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.04 46 0 F3 146507 aphid secondary symbionts 0.03 37 1 G 568987 Candidatus Hamiltonella 0.03 36 36 S 138072 Candidatus Hamiltonella defensa 0.01 7 7 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 1 0 G 568988 Candidatus Regiella 0.00 1 0 G1 3077955 unclassified Candidatus Regiella 0.00 1 1 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.02 23 0 F3 84564 ant endosymbionts 0.02 23 0 G 203804 Candidatus Blochmanniella 0.02 18 13 G1 711328 unclassified Candidatus Blochmanniella 0.00 2 2 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 2 2 S 1505597 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 0.00 1 1 S 2681986 Blochmannia endosymbiont of Camponotus nipponensis 0.00 5 5 S 251538 Candidatus Blochmannia ocreatus 0.00 5 0 G 1302410 Candidatus Annandia 0.00 5 5 S 1302411 Candidatus Annandia adelgestsuga 0.00 4 0 G 1906661 Candidatus Gullanella 0.00 4 4 S 1070130 Candidatus Gullanella endobia 0.00 3 0 G 472825 Candidatus Purcelliella 0.00 3 3 S 472834 Candidatus Purcelliella pentastirinorum 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.07 73 10 G 544 Citrobacter 0.04 44 0 G1 1344959 Citrobacter freundii complex 0.01 15 15 S 67828 Citrobacter gillenii 0.01 14 14 S 67827 Citrobacter werkmanii 0.01 6 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 5 5 S 1686385 Citrobacter sp. BIDMC108 0.00 1 1 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 5 5 S 546 Citrobacter freundii 0.00 4 4 S 1639133 Citrobacter portucalensis 0.01 10 10 S 2971264 Citrobacter enshiensis 0.01 6 0 S 35703 Citrobacter amalonaticus 0.01 6 6 S1 1261127 Citrobacter amalonaticus Y19 0.00 3 3 S 67824 Citrobacter farmeri 0.06 70 0 G 2815296 Jejubacter 0.06 70 70 S 2579935 Jejubacter calystegiae 0.05 59 0 G 620 Shigella 0.05 59 59 S 623 Shigella flexneri 0.05 54 0 G 1330547 Kosakonia 0.05 53 53 S 208223 Kosakonia cowanii 0.00 1 1 S 283686 Kosakonia radicincitans 0.05 49 0 G 1177214 Candidatus Profftia 0.03 32 0 G1 2735709 unclassified Candidatus Profftia 0.03 32 32 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.02 17 17 S 1177216 Candidatus Profftia tarda 0.02 24 2 G 413496 Cronobacter 0.02 22 22 S 413503 Cronobacter malonaticus 0.02 17 0 G 1081630 Candidatus Schneideria 0.02 17 17 S 1081631 Candidatus Schneideria nysicola 0.01 7 3 G 401618 Candidatus Riesia 0.00 2 2 S 401619 Candidatus Riesia pediculicola 0.00 2 2 S 428411 Candidatus Riesia pediculischaeffi 0.01 7 0 G 409304 Candidatus Ishikawella 0.01 7 0 S 168169 Candidatus Ishikawella capsulata 0.01 7 7 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 4 0 G 2726810 Scandinavium 0.00 4 4 S 1851514 Scandinavium goeteborgense 0.00 3 0 G 702 Plesiomonas 0.00 3 3 S 703 Plesiomonas shigelloides 0.00 3 0 G 1903434 Atlantibacter 0.00 2 2 S 565 Atlantibacter hermannii 0.00 1 1 S 255519 Atlantibacter subterranea 0.00 2 0 G 158483 Cedecea 0.00 2 2 S 158822 Cedecea neteri 0.00 1 0 G 83654 Leclercia 0.00 1 1 S 83655 Leclercia adecarboxylata 0.00 1 0 G 2303321 Superficieibacter 0.00 1 0 G1 2645744 unclassified Superficieibacter 0.00 1 1 S 3031919 Superficieibacter sp. HKU1 0.00 1 0 G 1048757 Candidatus Moranella 0.00 1 1 S 1048758 Candidatus Moranella endobia 0.00 1 0 G 1335483 Shimwellia 0.00 1 1 S 563 Shimwellia blattae 3.75 4049 3 F 1903409 Erwiniaceae 3.71 4009 1 G 551 Erwinia 3.70 3997 3997 S 1922217 Candidatus Erwinia haradaeae 0.01 9 2 G1 2622719 unclassified Erwinia 0.01 6 6 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 2675378 Erwinia sp. E602 0.00 1 1 S 552 Erwinia amylovora 0.00 1 1 S 55211 Erwinia persicina 0.01 13 0 G 2997349 Winslowiella 0.01 13 13 S 92490 Winslowiella toletana 0.01 12 1 G 53335 Pantoea 0.00 5 5 S 1235990 Candidatus Pantoea carbekii 0.00 1 1 S 59814 Pantoea dispersa 0.00 1 1 G1 2630326 unclassified Pantoea 0.00 1 1 S 470932 Pantoea deleyi 0.00 1 1 S 2364647 Pantoea piersonii 0.00 1 1 S 553 Pantoea ananatis 0.00 1 0 G1 1654067 Pantoea agglomerans group 0.00 1 1 S 549 Pantoea agglomerans 0.01 11 0 G 32199 Buchnera 0.01 11 11 S 9 Buchnera aphidicola 0.00 1 0 G 3231896 Paramixta 0.00 1 1 S 2740817 Paramixta manurensis 0.35 377 10 F 1903414 Morganellaceae 0.19 202 0 G 581 Morganella 0.19 202 202 S 582 Morganella morganii 0.10 110 12 G 637 Arsenophonus 0.06 70 70 S 634113 Candidatus Arsenophonus lipoptenae 0.01 14 14 S 2879119 Arsenophonus apicola 0.01 10 0 G1 2627083 unclassified Arsenophonus 0.01 8 8 S 3041619 Arsenophonus sp. aPb 0.00 2 2 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 4 4 S 638 Arsenophonus nasoniae 0.02 22 4 G 583 Proteus 0.01 14 14 S 584 Proteus mirabilis 0.00 3 3 S 102862 Proteus penneri 0.00 1 1 S 585 Proteus vulgaris 0.01 14 9 G 626 Xenorhabdus 0.00 5 0 S 40576 Xenorhabdus bovienii 0.00 5 5 S1 406818 Xenorhabdus bovienii SS-2004 0.01 10 10 G 29487 Photorhabdus 0.01 9 1 G 586 Providencia 0.01 7 7 S 588 Providencia stuartii 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.19 205 1 F 1903411 Yersiniaceae 0.13 138 5 G 613 Serratia 0.07 78 78 S 138074 Serratia symbiotica 0.03 30 0 S 82996 Serratia plymuthica 0.03 30 30 S1 1006598 Serratia plymuthica RVH1 0.01 12 12 S 614 Serratia liquefaciens 0.01 9 9 S 61652 Serratia rubidaea 0.00 3 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 3 3 S 2785630 Serratia sp. CMO1 0.00 1 0 S 2338073 Serratia inhibens 0.00 1 1 S1 1154756 Serratia inhibens PRI-2C 0.04 41 41 G 1927833 Candidatus Fukatsuia 0.02 24 0 G 629 Yersinia 0.02 19 0 G1 1649845 Yersinia pseudotuberculosis complex 0.02 19 1 S 632 Yersinia pestis 0.01 14 14 S1 748678 Yersinia pestis str. Pestoides B 0.00 4 4 S1 649716 Yersinia pestis Pestoides G 0.00 4 3 S 630 Yersinia enterocolitica 0.00 1 0 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 1 1 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.00 1 1 S 935293 Yersinia entomophaga 0.00 1 0 G 1745211 Chania 0.00 1 0 S 1639108 Chania multitudinisentens 0.00 1 1 S1 1441930 Chania multitudinisentens RB-25 0.15 160 0 F 2812006 Bruguierivoracaceae 0.15 160 0 G 84565 Sodalis 0.12 130 130 S 2697027 Sodalis ligni 0.02 26 0 S 1486991 Candidatus Sodalis pierantonius 0.02 26 26 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 3 3 S 1239307 Sodalis praecaptivus 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.03 30 1 F 1903410 Pectobacteriaceae 0.02 18 1 G 122277 Pectobacterium 0.01 9 9 S 2488639 Pectobacterium versatile 0.01 6 6 S 1905730 Pectobacterium parmentieri 0.00 2 2 S 2485124 Pectobacterium polonicum 0.01 9 1 G 204037 Dickeya 0.00 4 4 S 1089444 Dickeya solani 0.00 3 3 S 204039 Dickeya dianthicola 0.00 1 1 S 1778540 Dickeya fangzhongdai 0.00 2 0 G 71655 Brenneria 0.00 2 2 S 55213 Brenneria rubrifaciens 0.02 22 0 F 1903412 Hafniaceae 0.02 22 18 G 635 Edwardsiella 0.00 4 4 S 67780 Edwardsiella ictaluri 0.01 9 0 F 3120698 Gallaecimonadaceae 0.01 9 0 G 745410 Gallaecimonas 0.01 9 9 S 3029055 Gallaecimonas kandeliae 0.01 6 0 F 1903416 Budviciaceae 0.01 6 0 G 82984 Pragia 0.01 6 6 S 82985 Pragia fontium 6.39 6893 6 O 135622 Alteromonadales 6.30 6795 0 F 267888 Pseudoalteromonadaceae 6.29 6790 0 G 2834759 Flocculibacter 6.29 6790 6790 S 2744479 Flocculibacter collagenilyticus 0.00 5 0 G 53246 Pseudoalteromonas 0.00 4 0 G1 194690 unclassified Pseudoalteromonas 0.00 4 4 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 0 S 107327 Pseudoalteromonas ulvae 0.00 1 1 S1 1315306 Pseudoalteromonas ulvae UL12 0.06 67 1 F 267890 Shewanellaceae 0.06 66 5 G 22 Shewanella 0.05 53 51 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 1 1 S 2601269 Shewanella sp. YLB-09 0.00 4 4 S 62322 Shewanella baltica 0.00 1 1 S 1028752 Shewanella aestuarii 0.00 1 0 S 56812 Shewanella frigidimarina 0.00 1 1 S1 318167 Shewanella frigidimarina NCIMB 400 0.00 1 1 S 2018305 Shewanella bicestrii 0.00 1 1 S 712036 Shewanella dokdonensis 0.02 19 1 F 72275 Alteromonadaceae 0.01 15 0 F1 2903219 Alteromonas/Salinimonas group 0.01 15 0 G 226 Alteromonas 0.01 15 0 G1 2614992 unclassified Alteromonas 0.01 15 15 S 2267264 Alteromonas sp. RKMC-009 0.00 2 0 G 2894574 Saccharobesus 0.00 2 2 S 2172099 Saccharobesus litoralis 0.00 1 0 G 261825 Agarivorans 0.00 1 1 S 680279 Agarivorans gilvus 0.00 3 0 F 267892 Ferrimonadaceae 0.00 3 2 G 44011 Ferrimonas 0.00 1 0 S 44012 Ferrimonas balearica 0.00 1 1 S1 550540 Ferrimonas balearica DSM 9799 0.00 2 0 F 267893 Idiomarinaceae 0.00 2 0 G 135575 Idiomarina 0.00 2 0 G1 2614829 unclassified Idiomarina 0.00 2 2 S 2055892 Idiomarina sp. X4 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 1 G1 2637987 unclassified Moritella 1.62 1753 0 O 135623 Vibrionales 1.62 1753 12 F 641 Vibrionaceae 1.52 1645 1383 G 662 Vibrio 0.10 111 0 S 52443 Vibrio tapetis 0.10 111 111 S1 1671868 Vibrio tapetis subsp. tapetis 0.07 73 70 S 666 Vibrio cholerae 0.00 3 3 S1 1420885 Vibrio cholerae MS6 0.04 40 9 G1 2614977 unclassified Vibrio 0.01 12 12 S 2661922 Vibrio sp. THAF191d 0.01 9 9 S 2661921 Vibrio sp. THAF191c 0.00 3 3 S 2819099 Vibrio sp. SCSIO 43155 0.00 3 3 S 2751179 Vibrio sp. B1REV9 0.00 2 2 S 2751177 Vibrio sp. B1FIG11 0.00 1 1 S 2819103 Vibrio sp. SCSIO 43009 0.00 1 1 S 2942997 Vibrio sp. J383 0.01 12 1 G1 717610 Vibrio harveyi group 0.00 4 2 S 670 Vibrio parahaemolyticus 0.00 2 2 S1 745023 Vibrio parahaemolyticus 10329 0.00 4 4 S 696485 Vibrio owensii 0.00 3 3 S 669 Vibrio harveyi 0.01 12 12 S 2572923 Vibrio taketomensis 0.01 7 7 S 104609 Vibrio penaeicida 0.00 2 2 S 55601 Vibrio anguillarum 0.00 1 0 S 672 Vibrio vulnificus 0.00 1 1 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 1 S 1481663 Vibrio metoecus 0.00 1 1 S 265668 Vibrio ponticus 0.00 1 1 S 2662262 Vibrio algicola 0.00 1 1 S 674 Vibrio mimicus 0.09 94 52 G 657 Photobacterium 0.04 39 20 S 553611 Photobacterium leiognathi 0.02 19 19 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 2 1 S 38293 Photobacterium damselae 0.00 1 1 S1 85581 Photobacterium damselae subsp. damselae 0.00 1 1 G1 2628852 unclassified Photobacterium 0.00 2 0 G 511678 Aliivibrio 0.00 2 0 S 668 Aliivibrio fischeri 0.00 2 2 S1 1088719 Aliivibrio fischeri SR5 0.28 298 0 O 72274 Pseudomonadales 0.27 295 19 F 135621 Pseudomonadaceae 0.25 274 183 G 286 Pseudomonas 0.02 26 0 G1 196821 unclassified Pseudomonas 0.00 3 3 S 2954080 Pseudomonas sp. FP1762 0.00 3 3 S 1649877 Pseudomonas sp. CCOS 191 0.00 2 2 S 2025658 Pseudomonas sp. NS1(2017) 0.00 2 2 S 2954094 Pseudomonas sp. FP453 0.00 2 2 S 2954088 Pseudomonas sp. FP2262 0.00 2 2 S 2931382 Pseudomonas sp. PIA16 0.00 2 2 S 3137451 Pseudomonas sp. G.S.17 0.00 1 1 S 3110111 Pseudomonas sp. JQ170C 0.00 1 1 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 1 1 S 517398 Pseudomonas sp. D3 0.00 1 1 S 2954086 Pseudomonas sp. FP2196 0.00 1 1 S 2954101 Pseudomonas sp. FP830 0.00 1 1 S 2871095 Pseudomonas sp. DR48 0.00 1 1 S 2895472 Pseudomonas sp. B21-012 0.00 1 1 S 2954097 Pseudomonas sp. FP603 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.02 17 0 G1 136841 Pseudomonas aeruginosa group 0.02 17 17 S 287 Pseudomonas aeruginosa 0.01 12 0 G1 136845 Pseudomonas putida group 0.01 6 6 S 303 Pseudomonas putida 0.01 6 6 S 78327 Pseudomonas mosselii 0.01 10 10 S 2738125 Pseudomonas hefeiensis 0.01 10 3 G1 136843 Pseudomonas fluorescens group 0.00 4 1 S 47883 Pseudomonas synxantha 0.00 3 3 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 47878 Pseudomonas azotoformans 0.00 1 1 S 200450 Pseudomonas trivialis 0.00 1 1 S 183795 Pseudomonas mediterranea 0.00 4 4 S 2961893 Pseudomonas triclosanedens 0.00 3 3 S 2599595 Pseudomonas eucalypticola 0.00 2 0 G1 136849 Pseudomonas syringae group 0.00 2 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 2 1 S 317 Pseudomonas syringae 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 1 1 S 104087 Pseudomonas frederiksbergensis 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 321846 Pseudomonas simiae 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 930166 Pseudomonas brassicacearum 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 2894079 Pseudomonas oryziphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 G 2901164 Stutzerimonas 0.00 1 0 G1 136846 Stutzerimonas stutzeri group 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 3 0 F 3085095 Pseudohongiellaceae 0.00 3 0 G 1524249 Pseudohongiella 0.00 3 3 S 1249552 Pseudohongiella spirulinae 0.10 106 0 O 2887326 Moraxellales 0.10 106 2 F 468 Moraxellaceae 0.08 88 23 G 469 Acinetobacter 0.03 29 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.02 18 18 S 470 Acinetobacter baumannii 0.01 9 7 S 48296 Acinetobacter pittii 0.00 2 2 S1 871585 Acinetobacter pittii PHEA-2 0.00 2 2 S 471 Acinetobacter calcoaceticus 0.01 16 16 S 202956 Acinetobacter towneri 0.01 11 11 S 108981 Acinetobacter schindleri 0.00 3 3 S 756892 Acinetobacter indicus 0.00 2 2 S 40214 Acinetobacter johnsonii 0.00 2 1 G1 196816 unclassified Acinetobacter 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.00 1 0 S 52133 Acinetobacter venetianus 0.00 1 1 S1 1197884 Acinetobacter venetianus VE-C3 0.00 1 1 S 487316 Acinetobacter soli 0.01 12 0 G 475 Moraxella 0.01 11 11 S 2904120 Moraxella nasibovis 0.00 1 1 S 90241 Moraxella lincolnii 0.00 4 2 G 497 Psychrobacter 0.00 2 1 G1 196806 unclassified Psychrobacter 0.00 1 1 S 1415574 Psychrobacter sp. LV10R520-6 0.08 90 0 O 135625 Pasteurellales 0.08 90 5 F 712 Pasteurellaceae 0.02 23 1 G 724 Haemophilus 0.01 10 10 S 726 Haemophilus haemolyticus 0.01 6 6 S 729 Haemophilus parainfluenzae 0.00 5 5 S 727 Haemophilus influenzae 0.00 1 0 G1 2609962 unclassified Haemophilus 0.00 1 1 S 712310 Haemophilus sp. oral taxon 036 0.02 22 3 G 713 Actinobacillus 0.02 17 0 S 718 Actinobacillus equuli 0.02 17 17 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 2 S 157339 Actinobacillus arthritidis 0.01 14 0 G 745 Pasteurella 0.01 14 13 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.01 12 0 G 214906 Histophilus 0.01 12 12 S 731 Histophilus somni 0.01 8 7 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 2 0 G 75984 Mannheimia 0.00 1 1 S 75985 Mannheimia haemolytica 0.00 1 1 S 85402 Mannheimia granulomatis 0.00 1 0 G 155493 Gallibacterium 0.00 1 1 S 750 Gallibacterium anatis 0.00 1 1 G 292486 Avibacterium 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.08 87 0 O 135624 Aeromonadales 0.08 86 7 F 84642 Aeromonadaceae 0.05 52 9 G 642 Aeromonas 0.04 40 40 S 654 Aeromonas veronii 0.00 1 0 S 645 Aeromonas salmonicida 0.00 1 1 S1 197700 Aeromonas salmonicida subsp. masoucida 0.00 1 0 G1 257493 unclassified Aeromonas 0.00 1 1 S 2560029 Aeromonas sp. 2692-1 0.00 1 1 S 652 Aeromonas schubertii 0.02 19 4 G 225143 Oceanisphaera 0.01 15 15 S 1903694 Oceanisphaera avium 0.00 5 0 G 2802288 Dongshaea 0.00 5 5 S 2047966 Dongshaea marina 0.00 3 0 G 43947 Tolumonas 0.00 2 0 S 43948 Tolumonas auensis 0.00 2 2 S1 595494 Tolumonas auensis DSM 9187 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.08 86 0 O 135613 Chromatiales 0.07 80 1 F 1046 Chromatiaceae 0.05 56 0 G 2828366 Caldichromatium 0.05 56 56 S 2699430 Caldichromatium japonicum 0.01 7 0 G 85072 Allochromatium 0.01 7 7 S 553982 Allochromatium tepidum 0.01 6 6 G 1056 Thiocapsa 0.00 3 0 G 85073 Thermochromatium 0.00 3 0 S 1050 Thermochromatium tepidum 0.00 3 3 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 3 0 G 156885 Thioflavicoccus 0.00 3 0 S 80679 Thioflavicoccus mobilis 0.00 3 3 S1 765912 Thioflavicoccus mobilis 8321 0.00 2 1 G 2796146 Candidatus Nitrosacidococcus 0.00 1 0 G1 2942907 unclassified Candidatus Nitrosacidococcus 0.00 1 1 S 2942908 Candidatus Nitrosacidococcus sp. I8 0.00 1 1 G 61593 Thiorhodovibrio 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.00 5 0 F 72276 Ectothiorhodospiraceae 0.00 3 0 G 1335745 Spiribacter 0.00 3 0 S 1335746 Spiribacter salinus 0.00 3 3 S1 1260251 Spiribacter salinus M19-40 0.00 1 0 G 85108 Halorhodospira 0.00 1 1 S 1052 Halorhodospira halochloris 0.00 1 0 G 233099 Ectothiorhodosinus 0.00 1 1 S 233100 Ectothiorhodosinus mongolicus 0.00 1 0 F 255526 Halothiobacillaceae 0.00 1 1 G 109262 Halothiobacillus 0.06 60 0 O 118969 Legionellales 0.05 54 9 F 118968 Coxiellaceae 0.04 45 1 G 254245 Aquicella 0.04 44 44 S 254247 Aquicella siphonis 0.01 6 0 F 444 Legionellaceae 0.01 6 0 G 445 Legionella 0.00 4 0 S 446 Legionella pneumophila 0.00 4 4 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 2 2 S 96232 Legionella lytica 0.05 59 0 O 72273 Thiotrichales 0.04 45 0 F 135617 Thiotrichaceae 0.04 44 0 G 1021 Beggiatoa 0.04 44 44 S 288004 Beggiatoa leptomitoformis 0.00 1 0 G 1030 Thiothrix 0.00 1 1 S 525917 Thiothrix lacustris 0.01 8 1 F 135616 Piscirickettsiaceae 0.00 2 0 G 933 Thiomicrospira 0.00 1 0 S 92245 Thiomicrospira aerophila 0.00 1 1 S1 717772 Thiomicrospira aerophila AL3 0.00 1 0 G1 2643099 unclassified Thiomicrospira 0.00 1 1 S 3035472 Thiomicrospira sp. R3 0.00 2 2 G 34067 Cycloclasticus 0.00 2 0 G 2781121 Thiosulfatimonas 0.00 2 2 S 2675054 Thiosulfatimonas sediminis 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 5 0 F 2056687 Fastidiosibacteraceae 0.00 5 0 G 2056696 Cysteiniphilum 0.00 5 0 G1 2610889 unclassified Cysteiniphilum 0.00 5 5 S 2975055 Cysteiniphilum sp. QT6929 0.00 1 0 F 34064 Francisellaceae 0.00 1 1 G 1869285 Allofrancisella 0.04 42 1 O 135619 Oceanospirillales 0.02 21 5 F 135620 Oceanospirillaceae 0.01 7 0 G 187492 Thalassolituus 0.01 7 7 S 187493 Thalassolituus oleivorans 0.00 4 0 G 28253 Marinomonas 0.00 4 4 S 2773454 Marinomonas algicola 0.00 3 2 G 515417 Amphritea 0.00 1 1 S 452627 Amphritea japonica 0.00 2 0 G 267849 Nitrincola 0.00 2 2 S 2614693 Nitrincola iocasae 0.01 13 2 F 28256 Halomonadaceae 0.00 5 0 G 2745 Halomonas 0.00 3 3 S 3031727 Halomonas piscis 0.00 2 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2982692 Halomonas sp. M4R1S46 0.00 1 1 S 2952527 Halomonas sp. 3H 0.00 3 3 G 504090 Kushneria 0.00 2 0 F1 114403 Zymobacter group 0.00 2 0 G 114185 Candidatus Carsonella 0.00 2 2 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 3137766 Vreelandella 0.00 1 1 S 44935 Vreelandella venusta 0.00 2 0 F 255527 Saccharospirillaceae 0.00 2 0 G 231683 Saccharospirillum 0.00 2 2 S 2161747 Saccharospirillum mangrovi 0.00 2 0 F 2823145 Pleioneaceae 0.00 2 0 G 1502941 Pleionea 0.00 2 2 S 3070815 Pleionea litopenaei 0.00 1 0 F 224379 Hahellaceae 0.00 1 1 G 158481 Hahella 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.03 27 0 O 135615 Cardiobacteriales 0.03 27 0 F 868 Cardiobacteriaceae 0.02 17 0 G 13275 Suttonella 0.02 17 0 G1 2908647 unclassified Suttonella 0.02 17 17 S 2908648 Suttonella sp. R2A3 0.01 10 0 G 2717 Cardiobacterium 0.01 10 0 G1 2648856 unclassified Cardiobacterium 0.01 10 10 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.02 19 0 C1 118884 Gammaproteobacteria incertae sedis 0.01 14 0 G 1076625 Candidatus Steffania 0.01 14 14 S 1076626 Candidatus Steffania adelgidicola 0.00 3 0 G 198346 Candidatus Palibaumannia 0.00 3 2 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 1 1 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.00 1 0 F 412032 Celerinatantimonadaceae 0.00 1 0 G 412033 Celerinatantimonas 0.00 1 1 S 412034 Celerinatantimonas diazotrophica 0.00 1 0 G 2738850 Candidatus Reidiella 0.00 1 1 S 2738883 Candidatus Reidiella endopervernicosa 0.02 18 0 O 135618 Methylococcales 0.02 18 7 F 403 Methylococcaceae 0.00 5 0 G 39773 Methylomicrobium 0.00 5 0 S 39775 Methylomicrobium album 0.00 5 5 S1 686340 Methylomicrobium album BG8 0.00 2 2 G 416 Methylomonas 0.00 2 0 G 3135206 Candidatus Methylocalor 0.00 2 2 S 3108543 Candidatus Methylocalor cossyra 0.00 1 0 G 73778 Methylocaldum 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 1 0 G 1295378 Methylogaea 0.00 1 1 S 1295382 Methylogaea oryzae 0.01 16 0 O 1240482 Orbales 0.01 16 1 F 1240483 Orbaceae 0.01 15 0 G 2894762 Zophobihabitans 0.01 15 15 S 1635327 Zophobihabitans entericus 0.00 5 0 O 1706369 Cellvibrionales 0.00 3 2 F 1706372 Halieaceae 0.00 1 0 G 2678529 Kineobactrum 0.00 1 1 S 2708301 Kineobactrum salinum 0.00 2 0 F 1706373 Microbulbiferaceae 0.00 2 2 G 48073 Microbulbifer 0.00 2 0 O 3084968 Thiohalomonadales 0.00 2 0 F 3084969 Thiohalomonadaceae 0.00 2 0 G 2034504 Sulfurivermis 0.00 2 2 S 1972068 Sulfurivermis fontis 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 1 F 1692041 Acidiferrobacteraceae 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 1 G 261963 Kangiella 5.57 6012 39 C 28211 Alphaproteobacteria 3.66 3951 9 O 204441 Rhodospirillales 3.58 3866 0 F 2844601 Stellaceae 3.58 3866 0 G 93 Stella 3.58 3866 3866 S 94 Stella humosa 0.06 61 3 F 433 Acetobacteraceae 0.03 35 0 G 512381 Acidisoma 0.03 35 0 G1 2634065 unclassified Acidisoma 0.03 35 35 S 3040935 Acidisoma sp. PAMC 29798 0.01 10 0 G 35812 Roseococcus 0.01 10 10 S 2771361 Roseococcus microcysteis 0.01 8 0 G 50709 Acidocella 0.01 8 0 G1 2648610 unclassified Acidocella 0.01 8 8 S 2697363 Acidocella sp. MX-AZ03 0.00 3 2 G 125216 Roseomonas 0.00 1 1 S 1750527 Roseomonas fluvialis 0.00 2 0 G 504465 Rhodovastum 0.00 2 2 S 504468 Rhodovastum atsumiense 0.01 10 0 F 2690195 Elioraeaceae 0.01 10 0 G 457933 Elioraea 0.01 10 10 S 2843330 Elioraea tepida 0.00 4 0 F 41295 Rhodospirillaceae 0.00 3 0 G 111830 Defluviicoccus 0.00 3 3 S 111831 Defluviicoccus vanus 0.00 1 0 G 1081 Rhodospirillum 0.00 1 0 S 34018 Rhodospirillum centenum 0.00 1 1 S1 414684 Rhodospirillum centenum SW 0.00 1 0 F 3031143 Magnetovibrionaceae 0.00 1 0 G 1866954 Varunaivibrio 0.00 1 1 S 1773489 Varunaivibrio sulfuroxidans 1.67 1798 12 O 356 Hyphomicrobiales 1.40 1507 893 F 119045 Methylobacteriaceae 0.51 551 360 G 407 Methylobacterium 0.10 112 0 S 31998 Methylobacterium radiotolerans 0.10 112 112 S1 426355 Methylobacterium radiotolerans JCM 2831 0.03 34 11 G1 2615210 unclassified Methylobacterium 0.01 14 14 S 2202826 Methylobacterium sp. 17Sr1-1 0.01 8 8 S 426117 Methylobacterium sp. 4-46 0.00 1 1 S 2984843 Methylobacterium sp. FF17 0.03 27 27 S 410 Methylobacterium organophilum 0.00 4 4 S 270351 Methylobacterium aquaticum 0.00 4 4 S 570505 Methylobacterium bullatum 0.00 4 4 S 2051553 Methylobacterium currus 0.00 2 2 S 334852 Methylobacterium oryzae 0.00 2 2 S 1775910 Methylobacterium indicum 0.00 1 0 S 114616 Methylobacterium nodulans 0.00 1 1 S1 460265 Methylobacterium nodulans ORS 2060 0.00 1 1 S 269660 Methylobacterium brachiatum 0.05 49 39 G 186650 Microvirga 0.01 10 10 S 2651334 Microvirga thermotolerans 0.01 14 12 G 2282523 Methylorubrum 0.00 1 1 S 408 Methylorubrum extorquens 0.00 1 0 S 223967 Methylorubrum populi 0.00 1 1 S1 441620 Methylorubrum populi BJ001 0.21 232 0 F 82115 Rhizobiaceae 0.21 229 223 F1 227290 Rhizobium/Agrobacterium group 0.01 6 0 G 379 Rhizobium 0.01 6 0 S 384 Rhizobium leguminosarum 0.01 6 5 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 1 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 3 1 G 34019 Liberibacter 0.00 2 0 S 309868 Candidatus Liberibacter americanus 0.00 2 2 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.03 30 3 F 69277 Phyllobacteriaceae 0.03 27 0 G 68287 Mesorhizobium 0.02 26 26 S 2725666 Mesorhizobium terrae 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2865838 Mesorhizobium sp. AR07 0.00 5 4 F 41294 Nitrobacteraceae 0.00 1 0 G 374 Bradyrhizobium 0.00 1 1 S 1437360 Bradyrhizobium erythrophlei 0.00 4 0 F 2831106 Devosiaceae 0.00 3 1 G 46913 Devosia 0.00 2 2 S 2774137 Devosia rhizoryzae 0.00 1 0 G 1082930 Pelagibacterium 0.00 1 1 S 531813 Pelagibacterium halotolerans 0.00 3 0 F 45401 Hyphomicrobiaceae 0.00 3 0 G 1484898 Methyloceanibacter 0.00 3 0 G1 2617503 unclassified Methyloceanibacter 0.00 3 3 S 2170729 Methyloceanibacter sp. wino2 0.00 2 0 F 255475 Aurantimonadaceae 0.00 1 0 G 182269 Aurantimonas 0.00 1 0 G1 2638230 unclassified Aurantimonas 0.00 1 1 S 2906072 Aurantimonas sp. HBX-1 0.00 1 1 G 414371 Aureimonas 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 376743 Candidatus Endowatersipora 0.00 1 0 G1 3077945 unclassified Candidatus Endowatersipora 0.00 1 1 S 3077946 Candidatus Endowatersipora endosymbiont of Watersipora subatra 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 2528964 Xanthobacter dioxanivorans 0.08 88 5 O 204457 Sphingomonadales 0.07 76 46 F 41297 Sphingomonadaceae 0.02 26 13 G 13687 Sphingomonas 0.01 8 0 S 397260 Sphingomonas sanxanigenens 0.01 8 8 S1 1123269 Sphingomonas sanxanigenens DSM 19645 = NX02 0.00 2 1 G1 196159 unclassified Sphingomonas 0.00 1 1 S 3114300 Sphingomonas sp. M1-B02 0.00 2 2 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 S 2681549 Sphingomonas profundi 0.00 2 0 G 165695 Sphingobium 0.00 2 0 G1 2611147 unclassified Sphingobium 0.00 2 2 S 2970925 Sphingobium sp. JS3065 0.00 2 0 G 2709685 Parasphingorhabdus 0.00 1 0 S 394733 Parasphingorhabdus litoris 0.00 1 1 S1 1123271 Parasphingorhabdus litoris DSM 22379 0.00 1 1 S 2725558 Parasphingorhabdus halotolerans 0.01 7 1 F 335929 Erythrobacteraceae 0.00 3 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 3 0 G 1111 Porphyrobacter 0.00 3 0 G1 2683265 unclassified Porphyrobacter 0.00 3 3 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 2 2 G 2800681 Aurantiacibacter 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.06 63 12 O 204455 Rhodobacterales 0.04 48 10 F 31989 Paracoccaceae 0.03 34 29 G 265 Paracoccus 0.00 3 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.00 1 1 S 3017782 Paracoccus sp. SCSIO 75233 0.00 2 0 S 34003 Paracoccus aminophilus 0.00 2 2 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 0 G 1060 Rhodobacter 0.00 1 1 S 1850250 Rhodobacter xanthinilyticus 0.00 1 0 G 2680018 Rhodophyticola 0.00 1 0 G1 2680031 unclassified Rhodophyticola 0.00 1 1 S 2916397 Rhodophyticola sp. CCM32 0.00 1 0 G 2831955 Pikeienuella 0.00 1 1 S 2748098 Pikeienuella piscinae 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 3 0 F 2854170 Roseobacteraceae 0.00 1 0 G 2854186 Pseudosulfitobacter 0.00 1 1 S 1402135 Pseudosulfitobacter pseudonitzschiae 0.00 1 0 G 60136 Sulfitobacter 0.00 1 1 S 1775881 Sulfitobacter faviae 0.00 1 0 G 93682 Roseivivax 0.00 1 0 G1 2639302 unclassified Roseivivax 0.00 1 1 S 2587852 Roseivivax sp. THAF30 0.05 55 0 O 204458 Caulobacterales 0.05 55 0 F 76892 Caulobacteraceae 0.05 54 2 G 41275 Brevundimonas 0.05 51 0 G1 2622653 unclassified Brevundimonas 0.05 51 51 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 2774190 Brevundimonas goettingensis 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 2010972 Caulobacter rhizosphaerae 0.01 12 0 O 766 Rickettsiales 0.01 8 0 F 942 Anaplasmataceae 0.00 4 4 G 768 Anaplasma 0.00 3 0 G 2883098 Candidatus Mesenet 0.00 3 3 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 G 33993 Neorickettsia 0.00 4 0 F 775 Rickettsiaceae 0.00 4 0 F1 33988 Rickettsieae 0.00 2 0 G 780 Rickettsia 0.00 2 0 G1 114277 spotted fever group 0.00 2 0 S 781 Rickettsia conorii 0.00 2 2 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 5 0 C1 33807 unclassified Alphaproteobacteria 0.00 5 5 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.00 1 0 O 2800059 Maricaulales 0.00 1 1 F 2800061 Maricaulaceae 1.20 1299 39 C 28216 Betaproteobacteria 1.02 1098 23 O 80840 Burkholderiales 0.71 771 73 F 75682 Oxalobacteraceae 0.37 395 3 G 401469 Undibacterium 0.36 390 115 G1 2630295 unclassified Undibacterium 0.25 275 275 S 3048609 Undibacterium sp. CCC3.4 0.00 2 2 S 401471 Undibacterium parvum 0.23 245 233 G 29580 Janthinobacterium 0.01 12 0 G1 2610881 unclassified Janthinobacterium 0.01 12 12 S 3065910 Janthinobacterium sp. J1-1 0.04 40 23 F1 2895353 Telluria group 0.01 14 6 G 149698 Massilia 0.00 4 0 G1 2609279 unclassified Massilia 0.00 2 2 S 1707785 Massilia sp. WG5 0.00 1 1 S 2709303 Massilia sp. Se16.2.3 0.00 1 1 S 2970464 Massilia sp. H6 0.00 2 2 S 457921 Massilia varians 0.00 1 1 S 945844 Massilia oculi 0.00 1 1 S 2899220 Massilia endophytica 0.00 3 2 G 1522432 Pseudoduganella 0.00 1 0 G1 2637179 unclassified Pseudoduganella 0.00 1 1 S 2995154 Pseudoduganella sp. SL102 0.01 12 0 G 884214 Candidatus Zinderia 0.01 12 0 G1 3077950 unclassified Candidatus Zinderia 0.01 12 12 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 3 0 G 1344552 Noviherbaspirillum 0.00 3 0 G1 2617509 unclassified Noviherbaspirillum 0.00 3 3 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 2 2 G 963 Herbaspirillum 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.19 209 5 F 80864 Comamonadaceae 0.16 177 172 G 80865 Delftia 0.00 4 4 S 180282 Delftia tsuruhatensis 0.00 1 1 S 558537 Delftia lacustris 0.01 12 11 G 34072 Variovorax 0.00 1 1 G1 663243 unclassified Variovorax 0.01 10 1 G 283 Comamonas 0.01 6 6 S 2743470 Comamonas antarctica 0.00 2 2 S 2949090 Comamonas endophytica 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 5 5 G 28065 Rhodoferax 0.08 84 2 F 119060 Burkholderiaceae 0.03 29 6 G 32008 Burkholderia 0.02 17 0 G1 87882 Burkholderia cepacia complex 0.01 12 12 S 152500 Burkholderia dolosa 0.00 3 3 S 87883 Burkholderia multivorans 0.00 1 1 S 95485 Burkholderia stabilis 0.00 1 1 S 488447 Burkholderia contaminans 0.00 5 0 G1 111527 pseudomallei group 0.00 3 1 S 28450 Burkholderia pseudomallei 0.00 1 1 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S1 557724 Burkholderia pseudomallei 576 0.00 1 0 S 57975 Burkholderia thailandensis 0.00 1 1 S1 1249664 Burkholderia thailandensis 34 0.00 1 1 S 1503053 Burkholderia singularis 0.00 1 0 G1 2613784 unclassified Burkholderia 0.00 1 1 S 1494466 Burkholderia sp. FERM BP-3421 0.02 24 1 G 48736 Ralstonia 0.02 23 0 G1 3116862 Ralstonia solanacearum species complex 0.02 23 23 S 305 Ralstonia solanacearum 0.02 21 0 G 47670 Lautropia 0.02 21 21 S 47671 Lautropia mirabilis 0.00 4 0 G 44013 Polynucleobacter 0.00 3 3 S 576610 Polynucleobacter necessarius 0.00 1 1 S 556054 Polynucleobacter difficilis 0.00 1 0 G 1810868 Mycoavidus 0.00 1 0 G1 2649241 unclassified Mycoavidus 0.00 1 1 S 2840467 Mycoavidus sp. HKI 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 1 S 2571748 Paraburkholderia acidisoli 0.00 1 0 G 2038280 Robbsia 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.00 1 0 G 2571159 Mycetohabitans 0.00 1 1 S 417203 Mycetohabitans endofungorum 0.00 5 0 F 506 Alcaligenaceae 0.00 1 1 G 517 Bordetella 0.00 1 1 G 90243 Oligella 0.00 1 0 G 1921582 Orrella 0.00 1 1 S 2163011 Orrella marina 0.00 1 0 G 1472344 Basilea 0.00 1 0 S 1472345 Basilea psittacipulmonis 0.00 1 1 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 1 0 G 1100891 Paenalcaligenes 0.00 1 1 S 2980099 Paenalcaligenes faecalis 0.00 2 0 O1 224471 Burkholderiales genera incertae sedis 0.00 2 0 G 32012 Thiomonas 0.00 1 1 S 926 Thiomonas intermedia 0.00 1 0 G1 2625466 unclassified Thiomonas 0.00 1 1 S 1050370 Thiomonas sp. X19 0.00 2 2 F 995019 Sutterellaceae 0.00 2 0 F 2975441 Sphaerotilaceae 0.00 2 0 G 34102 Sphaerotilus 0.00 2 2 S 639200 Sphaerotilus sulfidivorans 0.13 137 0 O 206351 Neisseriales 0.12 128 47 F 481 Neisseriaceae 0.06 70 38 G 482 Neisseria 0.01 12 11 S 487 Neisseria meningitidis 0.00 1 1 S1 942513 Neisseria meningitidis WUE 2594 0.01 9 9 S 28449 Neisseria subflava 0.00 5 5 S 485 Neisseria gonorrhoeae 0.00 2 0 G1 2623750 unclassified Neisseria 0.00 2 2 S 2912675 Neisseria sp. Dent CA1/247 0.00 2 2 S 495 Neisseria elongata 0.00 1 1 S 1470200 Neisseria arctica 0.00 1 1 S 493 Neisseria canis 0.01 7 0 G 2593687 Aquella 0.01 7 7 S 2067065 Aquella oligotrophica 0.00 2 2 G 59 Vitreoscilla 0.00 1 0 G 538 Eikenella 0.00 1 1 S 539 Eikenella corrodens 0.00 1 0 G 32257 Kingella 0.00 1 1 S 505 Kingella oralis 0.00 5 0 F 1499392 Chromobacteriaceae 0.00 4 0 G 57739 Vogesella 0.00 4 0 G1 2684990 unclassified Vogesella 0.00 3 3 S 2877939 Vogesella sp. XCS3 0.00 1 1 S 1192162 Vogesella sp. LIG4 0.00 1 0 G 400060 Paludibacterium 0.00 1 1 S 400061 Paludibacterium yongneupense 0.00 4 0 F 2897176 Aquaspirillaceae 0.00 3 0 G 57479 Microvirgula 0.00 3 3 S 57480 Microvirgula aerodenitrificans 0.00 1 0 G 187 Aquaspirillum 0.00 1 0 G1 2620219 unclassified Aquaspirillum 0.00 1 1 S 1938604 Aquaspirillum sp. LM1 0.01 15 2 O 32003 Nitrosomonadales 0.01 6 1 F 206379 Nitrosomonadaceae 0.00 5 3 G 914 Nitrosomonas 0.00 2 2 S 44577 Nitrosomonas ureae 0.00 5 0 F 2008790 Thiobacillaceae 0.00 5 0 G 919 Thiobacillus 0.00 4 0 S 36861 Thiobacillus denitrificans 0.00 4 4 S1 292415 Thiobacillus denitrificans ATCC 25259 0.00 1 0 G1 2646513 unclassified Thiobacillus 0.00 1 1 S 3110231 Thiobacillus sp. SCUT-2 0.00 2 0 F 32011 Methylophilaceae 0.00 1 0 G 404 Methylobacillus 0.00 1 0 S 405 Methylobacillus flagellatus 0.00 1 1 S1 265072 Methylobacillus flagellatus KT 0.00 1 0 G 359407 Methylotenera 0.00 1 0 S 359408 Methylotenera mobilis 0.00 1 1 S1 583345 Methylotenera mobilis JLW8 0.01 6 0 O 206389 Rhodocyclales 0.01 6 1 F 2008794 Zoogloeaceae 0.00 5 0 G 2891294 Nitrogeniibacter 0.00 5 5 S 2016596 Nitrogeniibacter mangrovi 0.00 3 0 C1 119066 Betaproteobacteria incertae sedis 0.00 2 1 G 1381133 Candidatus Profftella 0.00 1 1 S 669502 Candidatus Profftella armatura 0.00 1 0 G 1301080 Candidatus Nasuia 0.00 1 1 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 O 1442155 Ferrovales 0.00 1 0 F 1442156 Ferrovaceae 0.00 1 0 G 416212 Ferrovum 0.00 1 1 S 416213 Ferrovum myxofaciens 0.00 4 0 C 1807140 Acidithiobacillia 0.00 4 0 O 225057 Acidithiobacillales 0.00 4 0 F 225058 Acidithiobacillaceae 0.00 4 4 G 119977 Acidithiobacillus 0.33 359 1 D1 1783270 FCB group 0.33 355 0 D2 68336 Bacteroidota/Chlorobiota group 0.33 353 2 P 976 Bacteroidota 0.15 167 0 C 200643 Bacteroidia 0.15 167 1 O 171549 Bacteroidales 0.07 76 4 F 171552 Prevotellaceae 0.03 33 0 G 2884814 Pseudoprevotella 0.03 33 33 S 2133944 Pseudoprevotella muciniphila 0.02 26 2 G 838 Prevotella 0.01 11 0 G1 2638335 unclassified Prevotella 0.00 5 0 S 652716 Prevotella sp. oral taxon 299 0.00 5 5 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 5 5 S 712471 Prevotella sp. oral taxon 475 0.00 1 1 S 2937774 Prevotella sp. E15-22 0.01 7 7 S 2801997 Prevotella herbatica 0.00 4 4 S 470565 Prevotella histicola 0.00 1 1 S 28128 Prevotella corporis 0.00 1 1 S 28129 Prevotella denticola 0.01 11 3 G 2974251 Segatella 0.00 4 3 S 165179 Segatella copri 0.00 1 1 S1 537011 Segatella copri DSM 18205 0.00 3 3 S 28135 Segatella oris 0.00 1 1 S 2518605 Segatella hominis 0.00 2 0 G 2974257 Hoylesella 0.00 1 1 S 28127 Hoylesella buccalis 0.00 1 1 S 76123 Hoylesella enoeca 0.06 67 0 F 815 Bacteroidaceae 0.06 67 0 G 816 Bacteroides 0.05 59 59 S 818 Bacteroides thetaiotaomicron 0.01 7 7 S 817 Bacteroides fragilis 0.00 1 1 S 329854 Bacteroides intestinalis 0.02 18 0 F 171551 Porphyromonadaceae 0.02 18 0 G 836 Porphyromonas 0.02 17 0 G1 2645799 unclassified Porphyromonas 0.02 17 17 S 712435 Porphyromonas sp. oral taxon 275 0.00 1 1 S 322095 Porphyromonas somerae 0.00 2 0 F 171550 Rikenellaceae 0.00 2 0 G 1647173 Acetobacteroides 0.00 2 0 G1 1760810 environmental samples 0.00 2 2 S 1760811 uncultured Acetobacteroides sp. 0.00 2 0 F 2005473 Muribaculaceae 0.00 2 0 G 2815786 Sodaliphilus 0.00 2 2 S 2606626 Sodaliphilus pleomorphus 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 156973 Dysgonomonas 0.00 1 1 G1 2630389 unclassified Dysgonomonas 0.11 122 0 C 768503 Cytophagia 0.11 122 1 O 768507 Cytophagales 0.11 119 0 F 89373 Cytophagaceae 0.11 114 0 G 107 Spirosoma 0.11 114 114 S 2666025 Spirosoma endbachense 0.00 5 0 G 455076 Rhodocytophaga 0.00 5 5 S 2704465 Rhodocytophaga rosea 0.00 1 0 F 1501348 Amoebophilaceae 0.00 1 0 G 273135 Candidatus Cardinium 0.00 1 1 S 247481 Candidatus Cardinium hertigii 0.00 1 0 F 2762301 Marivirgaceae 0.00 1 0 G 869806 Marivirga 0.00 1 1 S 1006 Marivirga tractuosa 0.06 61 0 C 117743 Flavobacteriia 0.06 61 0 O 200644 Flavobacteriales 0.03 27 1 F 49546 Flavobacteriaceae 0.02 21 0 G 1016 Capnocytophaga 0.02 19 19 S 1017 Capnocytophaga gingivalis 0.00 1 1 S 1018 Capnocytophaga ochracea 0.00 1 1 S 327575 Capnocytophaga leadbetteri 0.00 4 0 G 1287916 Euzebyella 0.00 4 4 S 1761453 Euzebyella marina 0.00 1 0 G 237 Flavobacterium 0.00 1 0 G1 196869 unclassified Flavobacterium 0.00 1 1 S 2732161 Flavobacterium sp. IMCC34852 0.02 23 0 F 2762318 Weeksellaceae 0.01 13 0 G 2766734 Faecalibacter 0.01 13 13 S 2898187 Faecalibacter bovis 0.01 9 0 F1 2782232 Chryseobacterium group 0.01 9 0 G 59732 Chryseobacterium 0.00 3 3 S 1813611 Chryseobacterium cucumeris 0.00 3 3 S 558152 Chryseobacterium piperi 0.00 2 0 G1 2593645 unclassified Chryseobacterium 0.00 2 2 S 2838877 Chryseobacterium sp. ZHDP1 0.00 1 1 S 2759528 Chryseobacterium capnotolerans 0.00 1 0 G 1778601 Apibacter 0.00 1 1 G1 2630820 unclassified Apibacter 0.01 8 0 O1 313602 Flavobacteriales incertae sedis 0.01 8 0 G 336809 Candidatus Karelsulcia 0.01 8 8 S 336810 Candidatus Karelsulcia muelleri 0.00 3 0 F 39782 Blattabacteriaceae 0.00 3 1 G 34098 Blattabacterium 0.00 2 2 S 1653831 Blattabacterium cuenoti 0.00 1 0 C 1937959 Saprospiria 0.00 1 0 O 1936988 Saprospirales 0.00 1 0 F 89374 Saprospiraceae 0.00 1 1 G 1007 Saprospira 0.00 1 0 P 1090 Chlorobiota 0.00 1 0 C 191410 Chlorobiia 0.00 1 0 O 191411 Chlorobiales 0.00 1 0 F 2968741 Chloroherpetonaceae 0.00 1 0 G 100715 Chloroherpeton 0.00 1 0 S 100716 Chloroherpeton thalassium 0.00 1 1 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 1 O 1853224 Rhodothermales 0.00 3 0 P 142182 Gemmatimonadota 0.00 3 0 C 219685 Gemmatimonadia 0.00 3 0 O 219686 Gemmatimonadales 0.00 3 0 F 219687 Gemmatimonadaceae 0.00 3 0 G 173479 Gemmatimonas 0.00 3 3 S 1379270 Gemmatimonas phototrophica 0.18 191 1 P 200940 Thermodesulfobacteriota 0.09 102 0 C 3031651 Desulfuromonadia 0.09 101 1 O 69541 Desulfuromonadales 0.09 99 0 F 213421 Desulfuromonadaceae 0.09 99 97 G 890 Desulfuromonas 0.00 2 2 S 1603606 Desulfuromonas soudanensis 0.00 1 0 F 2812024 Syntrophotaleaceae 0.00 1 0 G 2812025 Syntrophotalea 0.00 1 0 S 19 Syntrophotalea carbinolica 0.00 1 1 S1 338963 Syntrophotalea carbinolica DSM 2380 0.00 1 0 O 3031668 Geobacterales 0.00 1 1 F 213422 Geobacteraceae 0.07 71 0 C 3031646 Desulfarculia 0.07 71 0 O 453227 Desulfarculales 0.07 71 0 F 453228 Desulfarculaceae 0.07 71 0 G 453229 Desulfarculus 0.07 71 0 S 453230 Desulfarculus baarsii 0.07 71 71 S1 644282 Desulfarculus baarsii DSM 2075 0.01 6 0 C 67799 Thermodesulfobacteria 0.01 6 6 O 188710 Thermodesulfobacteriales 0.01 6 0 C 3031449 Desulfovibrionia 0.01 6 0 O 213115 Desulfovibrionales 0.01 6 1 F 194924 Desulfovibrionaceae 0.00 3 2 G 2035811 Pseudodesulfovibrio 0.00 1 1 S 641491 Pseudodesulfovibrio mercurii 0.00 2 0 G 2910978 Megalodesulfovibrio 0.00 2 0 S 879 Megalodesulfovibrio gigas 0.00 2 2 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 2 0 C 3031451 Desulfobulbia 0.00 2 0 O 3024411 Desulfobulbales 0.00 2 0 F 213121 Desulfobulbaceae 0.00 2 0 G 893 Desulfobulbus 0.00 2 2 S 1986146 Desulfobulbus oralis 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 1 F 213465 Syntrophobacteraceae 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 0 G 2904687 Desulforapulum 0.00 1 0 S 2296 Desulforapulum autotrophicum 0.00 1 1 S1 177437 Desulforapulum autotrophicum HRM2 0.00 1 0 C 3031450 Candidatus Desulfofervidia 0.00 1 0 O 3031460 Candidatus Desulfofervidales 0.00 1 0 F 1902584 Candidatus Desulfofervidaceae 0.00 1 0 G 1902583 Candidatus Desulfofervidus 0.00 1 1 S 1621989 Candidatus Desulfofervidus auxilii 0.16 168 0 P 32066 Fusobacteriota 0.16 168 0 C 203490 Fusobacteriia 0.16 168 2 O 203491 Fusobacteriales 0.14 146 0 F 1129771 Leptotrichiaceae 0.13 145 10 G 32067 Leptotrichia 0.05 57 57 S 157687 Leptotrichia wadei 0.05 53 53 S 554406 Leptotrichia hongkongensis 0.02 20 0 G1 2633022 unclassified Leptotrichia 0.01 11 11 S 1785996 Leptotrichia sp. oral taxon 847 0.00 5 5 S 712357 Leptotrichia sp. oral taxon 212 0.00 3 3 S 712362 Leptotrichia sp. oral taxon 221 0.00 1 1 S 712368 Leptotrichia sp. oral taxon 498 0.00 5 5 S 157691 Leptotrichia shahii 0.00 1 0 G 34104 Streptobacillus 0.00 1 1 S 34105 Streptobacillus moniliformis 0.02 18 0 F 203492 Fusobacteriaceae 0.02 18 14 G 848 Fusobacterium 0.00 3 2 S 76857 Fusobacterium polymorphum 0.00 1 1 S1 393480 Fusobacterium polymorphum ATCC 10953 0.00 1 0 S 1583098 Fusobacterium hwasookii 0.00 1 1 S1 1307443 Fusobacterium hwasookii ChDC F206 0.00 2 0 F 3072461 Haliovirgaceae 0.00 2 0 G 3072462 Haliovirga 0.00 2 2 S 2996794 Haliovirga abyssi 0.06 64 0 D1 2323 Bacteria incertae sedis 0.06 64 0 D2 1783234 Bacteria candidate phyla 0.05 57 1 P 95818 Candidatus Saccharibacteria 0.05 56 0 C 2093818 Candidatus Saccharimonadia 0.05 49 0 O 2093825 Candidatus Saccharimonadales 0.05 49 0 F 2171986 Candidatus Saccharimonadaceae 0.05 49 0 G 1331051 Candidatus Saccharimonas 0.05 49 49 S 1332188 Candidatus Saccharimonas aalborgensis 0.01 7 0 O 2093819 Candidatus Nanosynbacterales 0.01 7 0 F 2093822 Candidatus Nanosynbacteraceae 0.01 7 7 G 2093823 Candidatus Nanosynbacter 0.01 6 0 D3 95901 Candidatus Dependentiae 0.01 6 0 C 2497643 Candidatus Babeliae 0.01 6 0 O 2497644 Candidatus Babeliales 0.01 6 0 F 2953756 Candidatus Chromulinivoraceae 0.01 6 0 G 2953757 Candidatus Chromulinivorax 0.01 6 6 S 2066483 Candidatus Chromulinivorax destructor 0.00 1 0 D3 1783273 Patescibacteria group 0.00 1 0 D4 1794810 Microgenomates group 0.00 1 0 D5 2715732 Microgenomates group incertae sedis 0.00 1 0 F 2715733 Candidatus Chazhemtobacteraceae 0.00 1 0 G 2715734 Candidatus Chazhemtobacterium 0.00 1 1 S 2715735 Candidatus Chazhemtobacterium aquaticus 0.05 50 0 D1 1783257 PVC group 0.02 22 0 P 203682 Planctomycetota 0.02 19 5 C 203683 Planctomycetia 0.01 12 0 O 112 Planctomycetales 0.01 12 1 F 126 Planctomycetaceae 0.01 11 0 G 1649453 Gimesia 0.01 11 11 S 2527964 Gimesia aquarii 0.00 1 0 O 2691354 Pirellulales 0.00 1 0 F 2691357 Pirellulaceae 0.00 1 0 G 2795779 Rosistilla 0.00 1 1 S 2527990 Rosistilla oblonga 0.00 1 0 O 2691356 Isosphaerales 0.00 1 0 F 1763524 Isosphaeraceae 0.00 1 0 G 127 Isosphaera 0.00 1 0 S 128 Isosphaera pallida 0.00 1 1 S1 575540 Isosphaera pallida ATCC 43644 0.00 2 0 C 2897345 Candidatus Uabimicrobiia 0.00 2 0 O 2897347 Candidatus Uabimicrobiales 0.00 2 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 2 0 G 2897349 Candidatus Uabimicrobium 0.00 2 2 S 2596890 Candidatus Uabimicrobium amorphum 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 2483366 Sedimentisphaerales 0.00 1 0 F 2690158 Anaerohalosphaeraceae 0.00 1 0 G 2690159 Anaerohalosphaera 0.00 1 1 S 1936003 Anaerohalosphaera lusitana 0.02 17 0 P 74201 Verrucomicrobiota 0.01 9 0 C 203494 Verrucomicrobiia 0.01 9 0 O 48461 Verrucomicrobiales 0.01 9 0 F 203557 Verrucomicrobiaceae 0.01 8 0 G 2735 Verrucomicrobium 0.01 8 0 G1 2625155 unclassified Verrucomicrobium 0.01 8 8 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 G 2911469 Sulfuriroseicoccus 0.00 1 1 S 2707525 Sulfuriroseicoccus oceanibius 0.00 5 0 P1 326457 Verrucomicrobiota incertae sedis 0.00 5 0 G 1541670 Methylacidimicrobium 0.00 5 5 G1 2730358 unclassified Methylacidimicrobium 0.00 3 0 C 414999 Opitutia 0.00 2 1 O 415001 Puniceicoccales 0.00 1 0 O1 3056381 Puniceicoccales incertae sedis 0.00 1 0 G 3049269 Candidatus Pelagisphaera 0.00 1 1 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 O 415000 Opitutales 0.00 1 0 F 134623 Opitutaceae 0.00 1 0 G 2576890 Nibricoccus 0.00 1 1 S 2576891 Nibricoccus aquaticus 0.01 11 0 P 204428 Chlamydiota 0.01 11 9 C 204429 Chlamydiia 0.00 2 0 O 51291 Chlamydiales 0.00 2 2 F 809 Chlamydiaceae 0.04 42 0 P 29547 Campylobacterota 0.04 42 0 C 3031852 Epsilonproteobacteria 0.04 41 0 O 213849 Campylobacterales 0.01 15 0 F 72294 Campylobacteraceae 0.01 15 6 G 194 Campylobacter 0.01 6 6 S 827 Campylobacter ureolyticus 0.00 3 3 S 824 Campylobacter gracilis 0.01 11 0 F 2932623 Sulfurospirillaceae 0.01 11 0 G 57665 Sulfurospirillum 0.01 11 0 S 66821 Sulfurospirillum multivorans 0.01 11 11 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.01 9 0 F 2771472 Sulfurovaceae 0.01 9 0 G 265570 Sulfurovum 0.01 9 9 S 2893889 Sulfurovum mangrovi 0.00 5 0 F 72293 Helicobacteraceae 0.00 5 2 G 209 Helicobacter 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 1 S 29419 Helicobacter canis 0.00 1 1 S 210 Helicobacter pylori 0.00 1 0 F 2808963 Arcobacteraceae 0.00 1 0 G 2321111 Aliarcobacter 0.00 1 1 S 28198 Aliarcobacter cryaerophilus 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 224467 Nautiliaceae 0.00 1 0 G 191301 Caminibacter 0.00 1 0 S 291048 Caminibacter mediatlanticus 0.00 1 1 S1 391592 Caminibacter mediatlanticus TB-2 0.01 12 0 P 508458 Synergistota 0.01 12 0 C 649775 Synergistia 0.01 12 0 O 649776 Synergistales 0.01 11 0 F 649777 Synergistaceae 0.01 11 0 G 81411 Aminomonas 0.01 11 0 S 81412 Aminomonas paucivorans 0.01 11 11 S1 584708 Aminomonas paucivorans DSM 12260 0.00 1 0 F 3029085 Aminithiophilaceae 0.00 1 0 G 3029078 Aminithiophilus 0.00 1 1 S 3029084 Aminithiophilus ramosus 0.01 6 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 6 0 P 1293497 Nitrospinota 0.01 6 0 C 1293498 Nitrospinia 0.01 6 0 O 1293499 Nitrospinales 0.01 6 0 F 407032 Nitrospinaceae 0.01 6 0 G 35800 Nitrospina 0.01 6 6 S 1323948 Nitrospina watsonii 0.00 3 0 P 200783 Aquificota 0.00 3 0 C 187857 Aquificia 0.00 3 0 O 32069 Aquificales 0.00 3 0 F 224027 Hydrogenothermaceae 0.00 3 3 G 212790 Sulfurihydrogenibium 0.00 3 0 P 203691 Spirochaetota 0.00 3 0 C 203692 Spirochaetia 0.00 3 0 O 136 Spirochaetales 0.00 2 0 F 2845253 Treponemataceae 0.00 2 0 G 157 Treponema 0.00 1 1 S 744515 Treponema ruminis 0.00 1 1 S 165 Treponema saccharophilum 0.00 1 0 F 1643685 Borreliaceae 0.00 1 0 G 64895 Borreliella 0.00 1 1 S 100177 Borreliella lusitaniae 0.00 2 0 P 2818505 Myxococcota 0.00 2 0 P1 3031711 Polyangia 0.00 2 0 O 3031712 Polyangiales 0.00 2 0 F 49 Polyangiaceae 0.00 2 0 G 39643 Sorangium 0.00 2 2 S 56 Sorangium cellulosum 0.00 2 0 P 57723 Acidobacteriota 0.00 2 0 C 533205 Holophagae 0.00 1 0 O 533206 Acanthopleuribacterales 0.00 1 0 F 533207 Acanthopleuribacteraceae 0.00 1 0 G 2915177 Sulfidibacter 0.00 1 1 S 2818388 Sulfidibacter corallicola 0.00 1 0 O 574975 Holophagales 0.00 1 0 F 574976 Holophagaceae 0.00 1 0 G 35838 Holophaga 0.00 1 0 G1 89282 environmental samples 0.00 1 1 S 188475 uncultured Holophaga sp. 0.00 2 0 P 3018035 Bdellovibrionota 0.00 1 0 C 1553900 Oligoflexia 0.00 1 0 O 2024973 Silvanigrellales 0.00 1 0 F 2024974 Silvanigrellaceae 0.00 1 0 G 2838409 Pigmentibacter 0.00 1 0 G1 2838410 unclassified Pigmentibacter 0.00 1 1 S 2976982 Pigmentibacter sp. JX0631 0.00 1 0 C 3031419 Bacteriovoracia 0.00 1 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 1 0 P 74152 Elusimicrobiota 0.00 1 0 C 641853 Elusimicrobia 0.00 1 0 O 641854 Elusimicrobiales 0.00 1 0 F 641876 Elusimicrobiaceae 0.00 1 0 G 423604 Elusimicrobium 0.00 1 0 S 423605 Elusimicrobium minutum 0.00 1 1 S1 445932 Elusimicrobium minutum Pei191 0.00 1 0 P 200930 Deferribacterota 0.00 1 0 C 68337 Deferribacteres 0.00 1 1 O 191393 Deferribacterales 0.00 5 0 D 2157 Archaea 0.00 4 0 P 28890 Euryarchaeota 0.00 3 0 P1 2290931 Stenosarchaea group 0.00 3 0 C 183963 Halobacteria 0.00 3 0 O 2235 Halobacteriales 0.00 2 0 F 1963268 Haloarculaceae 0.00 1 0 G 2237 Haloarcula 0.00 1 1 S 3033390 Haloarcula ordinaria 0.00 1 0 G 2907493 Halocatena 0.00 1 1 S 2934340 Halocatena salina 0.00 1 0 F 1644056 Haloferacaceae 0.00 1 0 G 1075397 Halolamina 0.00 1 0 G1 2634974 unclassified Halolamina 0.00 1 1 S 1853690 Halolamina sp. CBA1230 0.00 1 0 C 2545688 Candidatus Methanoliparia 0.00 1 0 O 2545689 Candidatus Methanoliparales 0.00 1 0 F 2545690 Candidatus Methanoliparaceae 0.00 1 0 G 2545692 Candidatus Methanoliparum 0.00 1 0 G1 2874847 unclassified Candidatus Methanoliparum 0.00 1 1 S 2874846 Candidatus Methanoliparum sp. LAM-1 0.00 1 0 D1 1783276 DPANN group 0.00 1 0 P 1462430 Candidatus Nanohalarchaeota 0.00 1 0 P1 2856064 Candidatus Nanohalarchaeota incertae sedis 0.00 1 0 G 3157591 Candidatus Nanohalovita 0.00 1 1 S 2978046 Candidatus Nanohalovita haloferacivicina 0.06 63 0 D 10239 Viruses 0.05 49 0 C 2840056 Naldaviricetes 0.05 49 0 O 2840070 Lefavirales 0.05 49 0 F 10442 Baculoviridae 0.05 49 0 G 558017 Betabaculovirus 0.05 49 0 S 3051997 Betabaculovirus chofumiferanae 0.05 49 49 S1 56947 Choristoneura fumiferana granulovirus 0.01 14 0 D1 2731341 Duplodnaviria 0.01 14 0 K 2731360 Heunggongvirae 0.01 14 0 P 2731618 Uroviricota 0.01 14 0 C 2731619 Caudoviricetes 0.01 11 0 G 186789 Punavirus 0.01 11 0 S 10678 Punavirus P1 0.01 11 11 S1 2886926 Escherichia phage P1 0.00 3 0 F 2946170 Straboviridae 0.00 3 0 F1 1198136 Tevenvirinae 0.00 3 0 G 10663 Tequatrovirus 0.00 3 0 S 2844199 Tequatrovirus gee4507 0.00 3 3 S1 2502306 Escherichia phage vB_EcoM_G4507