16.76 22942 22942 U 0 unclassified 83.24 113936 26 R 1 root 83.06 113694 1 R1 131567 cellular organisms 83.06 113687 2906 D 2 Bacteria 51.86 70990 357 P 1224 Pseudomonadota 23.30 31897 183 C 28211 Alphaproteobacteria 13.27 18167 95 O 356 Hyphomicrobiales 12.38 16940 11087 F 119045 Methylobacteriaceae 3.85 5271 3907 G 407 Methylobacterium 0.30 412 0 S 31998 Methylobacterium radiotolerans 0.30 412 412 S1 426355 Methylobacterium radiotolerans JCM 2831 0.27 372 372 S 410 Methylobacterium organophilum 0.25 340 91 G1 2615210 unclassified Methylobacterium 0.09 122 122 S 426117 Methylobacterium sp. 4-46 0.08 108 108 S 2202826 Methylobacterium sp. 17Sr1-1 0.01 17 17 S 2984843 Methylobacterium sp. FF17 0.00 1 1 S 2894310 Methylobacterium sp. NMS14P 0.00 1 1 S 3138063 Methylobacterium sp. CB376 0.07 93 93 S 570505 Methylobacterium bullatum 0.03 42 42 S 1775910 Methylobacterium indicum 0.02 28 28 S 270351 Methylobacterium aquaticum 0.02 24 24 S 2051553 Methylobacterium currus 0.02 22 22 S 334852 Methylobacterium oryzae 0.01 11 0 S 114616 Methylobacterium nodulans 0.01 11 11 S1 460265 Methylobacterium nodulans ORS 2060 0.01 11 11 S 2202827 Methylobacterium terrae 0.00 5 5 S 2202825 Methylobacterium durans 0.00 4 4 S 269660 Methylobacterium brachiatum 0.34 463 385 G 186650 Microvirga 0.05 72 72 S 2651334 Microvirga thermotolerans 0.00 5 5 S 1882682 Microvirga ossetica 0.00 1 0 G1 2617746 unclassified Microvirga 0.00 1 1 S 2807101 Microvirga sp. VF16 0.09 119 24 G 2282523 Methylorubrum 0.07 95 29 S 408 Methylorubrum extorquens 0.05 66 66 S1 272630 Methylorubrum extorquens AM1 0.68 931 19 F 82115 Rhizobiaceae 0.66 899 786 F1 227290 Rhizobium/Agrobacterium group 0.08 104 54 G 379 Rhizobium 0.03 41 0 S 384 Rhizobium leguminosarum 0.03 41 41 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 6 0 S 398 Rhizobium tropici 0.00 6 6 S1 698761 Rhizobium tropici CIAT 899 0.00 2 0 G1 2613769 unclassified Rhizobium 0.00 2 2 S 2926709 Rhizobium sp. CC-CFT758 0.00 1 1 S 359 Rhizobium rhizogenes 0.00 4 0 G 1612611 Pararhizobium 0.00 4 0 G1 2643050 unclassified Pararhizobium 0.00 4 4 S 3067903 Pararhizobium sp. IMCC21322 0.00 3 0 G 1525371 Neorhizobium 0.00 2 0 G1 2629175 unclassified Neorhizobium 0.00 2 2 S 2978974 Neorhizobium sp. CSC1952 0.00 1 1 S 515361 Neorhizobium petrolearium 0.00 2 0 G 357 Agrobacterium 0.00 2 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 2 2 S 358 Agrobacterium tumefaciens 0.00 6 1 G 34019 Liberibacter 0.00 3 0 S 309868 Candidatus Liberibacter americanus 0.00 3 3 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 1 1 S 34021 Candidatus Liberibacter asiaticus 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 4 3 G 323620 Shinella 0.00 1 1 G1 2643062 unclassified Shinella 0.00 2 0 F1 227292 Sinorhizobium/Ensifer group 0.00 2 0 G 28105 Sinorhizobium 0.00 2 2 S 382 Sinorhizobium meliloti 0.00 1 0 G 1648508 Ciceribacter 0.00 1 1 S 1969821 Ciceribacter thiooxidans 0.05 64 0 F 255475 Aurantimonadaceae 0.05 64 51 G 414371 Aureimonas 0.01 13 13 S 2758041 Aureimonas mangrovi 0.03 37 0 F 2831100 Boseaceae 0.03 37 34 G 85413 Bosea 0.00 3 3 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.02 27 1 F 41294 Nitrobacteraceae 0.02 22 10 G 374 Bradyrhizobium 0.01 10 0 S 44255 Bradyrhizobium oligotrophicum 0.01 10 10 S1 1245469 Bradyrhizobium oligotrophicum S58 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 1325111 Bradyrhizobium sp. CCBAU 53338 0.00 1 1 S 1355477 Bradyrhizobium diazoefficiens 0.00 3 0 G 1033 Afipia 0.00 3 3 S 40137 Afipia carboxidovorans 0.00 1 1 G 1073 Rhodopseudomonas 0.02 25 0 O1 119042 Hyphomicrobiales incertae sedis 0.02 22 0 G 212791 Enhydrobacter 0.02 22 0 G1 2632691 unclassified Enhydrobacter 0.02 22 22 S 1894999 Enhydrobacter sp. 0.00 2 0 G 376743 Candidatus Endowatersipora 0.00 2 0 G1 3077945 unclassified Candidatus Endowatersipora 0.00 2 2 S 3077946 Candidatus Endowatersipora endosymbiont of Watersipora subatra 0.00 1 0 G 1734920 Pseudorhodoplanes 0.00 1 1 S 1235591 Pseudorhodoplanes sinuspersici 0.01 11 0 F 118882 Brucellaceae 0.01 11 0 F1 2826938 Brucella/Ochrobactrum group 0.01 11 0 G 234 Brucella 0.01 8 0 S 29459 Brucella melitensis 0.01 8 0 S1 645169 Brucella melitensis bv. 2 0.01 8 8 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 2 0 G1 2632610 unclassified Brucella 0.00 1 1 S 3142977 Brucella sp. BE17 0.00 1 1 S 3045175 Brucella sp. NM4 0.00 1 1 S 94625 Brucella intermedia 0.01 9 0 F 2831106 Devosiaceae 0.00 5 0 G 3064792 Mariluticola 0.00 5 5 S 2909283 Mariluticola halotolerans 0.00 4 3 G 46913 Devosia 0.00 1 1 S 2774137 Devosia rhizoryzae 0.00 6 4 F 45404 Beijerinckiaceae 0.00 2 0 G 120652 Methylocella 0.00 2 2 S 227605 Methylocella tundrae 0.00 6 1 F 335928 Xanthobacteraceae 0.00 3 0 G 204476 Labrys 0.00 3 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 3 3 S 2789216 Labrys sp. KNU-23 0.00 1 0 G 99 Ancylobacter 0.00 1 1 S 223390 Ancylobacter polymorphus 0.00 1 0 G 556257 Pseudolabrys 0.00 1 1 S 331696 Pseudolabrys taiwanensis 0.00 5 3 F 2821832 Stappiaceae 0.00 2 0 G 150830 Roseibium 0.00 2 0 G1 1936170 environmental samples 0.00 2 2 S 1936171 uncultured Roseibium sp. 0.00 2 0 F 2843308 Pleomorphomonadaceae 0.00 1 0 G 261933 Pleomorphomonas 0.00 1 0 G1 442120 environmental samples 0.00 1 1 S 442121 uncultured Pleomorphomonas sp. 0.00 1 0 G 1572860 Hartmannibacter 0.00 1 1 S 1482074 Hartmannibacter diazotrophicus 0.00 2 0 F 772 Bartonellaceae 0.00 2 0 G 773 Bartonella 0.00 2 2 S 2267275 Bartonella krasnovii 0.00 2 0 F 69277 Phyllobacteriaceae 0.00 2 0 G 68287 Mesorhizobium 0.00 2 1 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2493668 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 0.00 1 0 F 2036754 Chelatococcaceae 0.00 1 1 G 28209 Chelatococcus 0.00 1 0 F 3149309 Methylopilaceae 0.00 1 0 G 2041902 Chenggangzhangella 0.00 1 1 S 1437009 Chenggangzhangella methanolivorans 0.00 1 0 F 45401 Hyphomicrobiaceae 0.00 1 1 G 81 Hyphomicrobium 0.00 1 1 F 2813035 Parvibaculaceae 0.00 1 0 F 3142785 Terrirubraceae 0.00 1 0 G 3142786 Terrirubrum 0.00 1 1 S 2895980 Terrarubrum flagellatum 9.29 12712 41 O 204441 Rhodospirillales 9.14 12507 0 F 2844601 Stellaceae 9.14 12507 0 G 93 Stella 9.14 12507 12507 S 94 Stella humosa 0.08 113 3 F 433 Acetobacteraceae 0.06 78 0 G 512381 Acidisoma 0.06 78 0 G1 2634065 unclassified Acidisoma 0.06 78 78 S 3040935 Acidisoma sp. PAMC 29798 0.02 22 0 G 35812 Roseococcus 0.02 22 22 S 2771361 Roseococcus microcysteis 0.00 4 0 G 504465 Rhodovastum 0.00 4 4 S 504468 Rhodovastum atsumiense 0.00 2 2 G 434 Acetobacter 0.00 1 0 G 1434011 Komagataeibacter 0.00 1 1 S 215221 Komagataeibacter rhaeticus 0.00 1 0 G 125216 Roseomonas 0.00 1 1 S 257708 Roseomonas gilardii 0.00 1 0 G 153497 Kozakia 0.00 1 1 S 153496 Kozakia baliensis 0.00 1 0 G 1079922 Commensalibacter 0.00 1 1 S 2070537 Commensalibacter melissae 0.02 33 0 F 2829815 Azospirillaceae 0.01 19 18 G 204447 Skermanella 0.00 1 1 S 1789672 Skermanella mucosa 0.01 11 11 G 191 Azospirillum 0.00 2 0 G 1543704 Niveispirillum 0.00 2 2 S 1612173 Niveispirillum cyanobacteriorum 0.00 1 0 G 1543705 Nitrospirillum 0.00 1 0 S 3144925 Nitrospirillum viridazoti 0.00 1 1 S1 1441467 Nitrospirillum viridazoti CBAmc 0.01 15 0 F 41295 Rhodospirillaceae 0.01 10 0 G 111830 Defluviicoccus 0.01 10 10 S 111831 Defluviicoccus vanus 0.00 5 0 G 1263978 Candidatus Endolissoclinum 0.00 5 5 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 2 0 F 2844864 Thalassobaculaceae 0.00 2 0 G 526215 Thalassobaculum 0.00 2 0 G1 2632499 unclassified Thalassobaculum 0.00 2 2 S 3100173 Thalassobaculum sp. OXR-137 0.00 1 0 F 2690195 Elioraeaceae 0.00 1 0 G 457933 Elioraea 0.00 1 1 S 2843330 Elioraea tepida 0.22 307 0 O 204458 Caulobacterales 0.22 307 1 F 76892 Caulobacteraceae 0.22 305 3 G 41275 Brevundimonas 0.22 302 0 G1 2622653 unclassified Brevundimonas 0.22 301 301 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 2591463 Brevundimonas sp. M20 0.00 1 0 G 20 Phenylobacterium 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.17 231 20 O 204455 Rhodobacterales 0.15 207 28 F 31989 Paracoccaceae 0.11 144 105 G 265 Paracoccus 0.02 23 2 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 19 19 S 2589076 Paracoccus sp. AK26 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.01 14 0 S 34003 Paracoccus aminophilus 0.01 14 14 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 S 147645 Paracoccus yeei 0.00 1 1 S 1945662 Paracoccus contaminans 0.01 18 0 G 366614 Haematobacter 0.01 18 18 S 195105 Haematobacter massiliensis 0.00 6 0 G 1060 Rhodobacter 0.00 6 6 S 1850250 Rhodobacter xanthinilyticus 0.00 4 0 G 2831955 Pikeienuella 0.00 4 4 S 2748098 Pikeienuella piscinae 0.00 3 0 G 34008 Rhodovulum 0.00 3 0 G1 2631432 unclassified Rhodovulum 0.00 3 3 S 1564506 Rhodovulum sp. P5 0.00 1 0 G 204456 Gemmobacter 0.00 1 1 S 2840474 Gemmobacter fulvus 0.00 1 0 G 2946607 Neotabrizicola 0.00 1 1 S 2807096 Neotabrizicola shimadae 0.00 1 0 G 2816884 Qingshengfaniella 0.00 1 1 S 2599296 Qingshengfaniella alkalisoli 0.00 1 1 G 1653176 Cereibacter 0.00 4 0 F 2854170 Roseobacteraceae 0.00 2 1 G 74030 Roseovarius 0.00 1 1 S 74031 Roseovarius tolerans 0.00 2 0 G 92944 Ketogulonicigenium 0.00 2 2 S 92947 Ketogulonicigenium robustum 0.15 199 12 O 204457 Sphingomonadales 0.13 173 8 F 41297 Sphingomonadaceae 0.12 162 149 G 13687 Sphingomonas 0.00 5 5 S 298708 Sphingomonas kaistensis 0.00 3 3 S 13689 Sphingomonas paucimobilis 0.00 2 2 S 2698828 Sphingomonas lacunae 0.00 1 1 S 1813879 Sphingomonas panacisoli 0.00 1 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2804617 Sphingomonas sp. LHG3406-1 0.00 1 1 S 2681549 Sphingomonas profundi 0.00 2 0 G 165696 Novosphingobium 0.00 1 0 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 3079861 Novosphingobium sp. ZN18A2 0.00 1 1 S 2728851 Novosphingobium olei 0.00 1 0 G 1434046 Sphingorhabdus 0.00 1 1 S 1913578 Sphingorhabdus lutea 0.01 14 0 F 335929 Erythrobacteraceae 0.01 7 7 G 2800681 Aurantiacibacter 0.00 5 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 5 0 G 1111 Porphyrobacter 0.00 5 0 G1 2683265 unclassified Porphyrobacter 0.00 5 5 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 1 0 G 361177 Altererythrobacter 0.00 1 0 G1 2614945 unclassified Altererythrobacter 0.00 1 1 S 2060312 Altererythrobacter sp. B11 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.05 65 6 O 766 Rickettsiales 0.04 53 0 F 942 Anaplasmataceae 0.03 43 43 G 768 Anaplasma 0.00 4 0 G 2883098 Candidatus Mesenet 0.00 4 3 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.00 3 0 G 943 Ehrlichia 0.00 3 1 G1 106178 canis group 0.00 1 1 S 944 Ehrlichia canis 0.00 1 0 S 35795 Ehrlichia muris 0.00 1 1 S1 1423892 Ehrlichia muris AS145 0.00 3 0 F1 952 Wolbachieae 0.00 3 0 G 953 Wolbachia 0.00 3 1 G1 2640676 unclassified Wolbachia 0.00 1 1 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.00 1 1 S 2954063 Wolbachia endosymbiont (group A) of Tiphia femorata 0.00 5 0 F 775 Rickettsiaceae 0.00 5 0 F1 33988 Rickettsieae 0.00 4 0 G 780 Rickettsia 0.00 3 0 G1 114277 spotted fever group 0.00 3 0 S 781 Rickettsia conorii 0.00 3 3 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.01 10 1 O 1921002 Holosporales 0.00 5 0 F 44746 Holosporaceae 0.00 3 0 G 2601651 Candidatus Nesciobacter 0.00 3 3 S 2601668 Candidatus Nesciobacter abundans 0.00 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 4 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 3 0 G 1521255 Candidatus Paracaedibacter 0.00 3 3 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 1 0 G 3163645 Candidatus Bodocaedibacter 0.00 1 1 S 2741701 Candidatus Bodocaedibacter vickermanii 0.01 8 0 O 54526 Candidatus Pelagibacterales 0.01 8 0 F 1655514 Candidatus Pelagibacteraceae 0.01 8 3 G 198251 Candidatus Pelagibacter 0.00 5 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 5 5 S 1002672 Candidatus Pelagibacter sp. IMCC9063 0.00 6 0 O 2066490 Emcibacterales 0.00 6 0 F 2066491 Emcibacteraceae 0.00 3 0 G 2943291 Pseudemcibacter 0.00 3 3 S 2857064 Pseudemcibacter aquimaris 0.00 2 0 G 2813803 Luteithermobacter 0.00 2 2 S 2582913 Luteithermobacter gelatinilyticus 0.00 1 0 G 1602338 Emcibacter 0.00 1 0 G1 2644914 unclassified Emcibacter 0.00 1 1 S 1979954 Emcibacter sp. 0.00 3 0 C1 33807 unclassified Alphaproteobacteria 0.00 3 3 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.00 3 0 O 2800060 Hyphomonadales 0.00 3 0 F 69657 Hyphomonadaceae 0.00 3 2 G 85 Hyphomonas 0.00 1 0 G1 225297 environmental samples 0.00 1 1 S 225298 uncultured Hyphomonas sp. 0.00 2 2 O 362534 Kordiimonadales 0.00 1 0 O 1191478 Magnetococcales 0.00 1 0 F 1191479 Magnetococcaceae 0.00 1 0 G 162171 Magnetococcus 0.00 1 0 S 1124597 Magnetococcus marinus 0.00 1 1 S1 156889 Magnetococcus marinus MC-1 22.67 31030 531 C 1236 Gammaproteobacteria 15.96 21842 0 O 135614 Lysobacterales 15.94 21821 11 F 32033 Lysobacteraceae 15.68 21461 3 G 338 Xanthomonas 15.68 21457 21457 S 29447 Xanthomonas albilineans 0.00 1 0 S 343 Xanthomonas translucens 0.00 1 1 S1 134875 Xanthomonas translucens pv. translucens 0.25 343 89 G 40323 Stenotrophomonas 0.19 254 12 G1 995085 Stenotrophomonas maltophilia group 0.17 236 236 S 40324 Stenotrophomonas maltophilia 0.00 6 0 G2 2961925 unclassified Stenotrophomonas maltophilia group 0.00 4 4 S 2072414 Stenotrophomonas sp. ESTM1D_MKCIP4_1 0.00 2 2 S 2072413 Stenotrophomonas sp. SAU14A_NAIMI4_5 0.00 3 3 G 83618 Pseudoxanthomonas 0.00 2 1 G 68 Lysobacter 0.00 1 1 S 435897 Lysobacter capsici 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.02 21 7 F 1775411 Rhodanobacteraceae 0.01 12 0 G 75309 Rhodanobacter 0.01 12 12 S 666685 Rhodanobacter denitrificans 0.00 1 1 G 242605 Luteibacter 0.00 1 0 G 323413 Dokdonella 0.00 1 0 S 323415 Dokdonella koreensis 0.00 1 1 S1 1300342 Dokdonella koreensis DS-123 2.88 3940 295 O 91347 Enterobacterales 1.95 2670 302 F 543 Enterobacteriaceae 0.50 689 678 F1 36866 unclassified Enterobacteriaceae 0.01 7 7 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 3 3 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 1 1 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.48 660 5 G 561 Escherichia 0.47 647 600 S 562 Escherichia coli 0.01 12 12 S1 1322345 Escherichia coli ATCC 25922 0.01 9 9 S1 331112 Escherichia coli HS 0.01 8 8 S1 2079157 Escherichia coli O2:H1 0.01 7 7 S1 316435 Escherichia coli Nissle 1917 0.00 3 3 S1 1446600 Escherichia coli O15:H18 0.00 3 0 S1 83334 Escherichia coli O157:H7 0.00 3 3 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 2 2 S1 362663 Escherichia coli 536 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.00 1 1 S1 2874053 Escherichia coli O25:H1 0.00 1 1 S1 2778656 Escherichia coli O20:H12 0.00 6 6 S 208962 Escherichia albertii 0.00 2 2 S 1499973 Escherichia marmotae 0.23 320 0 F1 2890311 Klebsiella/Raoultella group 0.23 320 11 G 570 Klebsiella 0.16 216 179 S 573 Klebsiella pneumoniae 0.03 37 35 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 2 2 S2 1392499 Klebsiella pneumoniae subsp. pneumoniae 1158 0.04 60 60 S 548 Klebsiella aerogenes 0.01 17 15 S 1463165 Klebsiella quasipneumoniae 0.00 2 2 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 10 6 S 244366 Klebsiella variicola 0.00 3 3 S1 640131 Klebsiella variicola At-22 0.00 1 1 S1 2590157 Klebsiella variicola subsp. variicola 0.00 6 6 S 1134687 Klebsiella michiganensis 0.22 303 1 G 547 Enterobacter 0.20 279 2 G1 354276 Enterobacter cloacae complex 0.14 197 197 S 299767 Enterobacter ludwigii 0.04 58 58 S 158836 Enterobacter hormaechei 0.01 16 16 S 208224 Enterobacter kobei 0.00 4 4 S 61645 Enterobacter asburiae 0.00 1 0 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.02 23 23 S 881260 Enterobacter bugandensis 0.19 265 10 G 590 Salmonella 0.19 254 26 S 28901 Salmonella enterica 0.17 228 11 S1 59201 Salmonella enterica subsp. enterica 0.04 48 48 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.03 46 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.02 27 27 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 18 18 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 1 1 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.03 41 41 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.02 29 29 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 13 13 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.01 9 9 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.01 9 2 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 4 4 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 3 3 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 9 8 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 4 4 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 2 2 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 0 S 54736 Salmonella bongori 0.00 1 1 S1 1299282 Salmonella bongori CFSAN000510 0.02 23 0 G 2815296 Jejubacter 0.02 23 23 S 2579935 Jejubacter calystegiae 0.02 22 0 G 544 Citrobacter 0.01 9 0 G1 1344959 Citrobacter freundii complex 0.00 4 4 S 67828 Citrobacter gillenii 0.00 3 3 S 1639133 Citrobacter portucalensis 0.00 1 1 S 546 Citrobacter freundii 0.00 1 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 1 1 S 1686385 Citrobacter sp. BIDMC108 0.01 9 9 S 2971264 Citrobacter enshiensis 0.00 4 0 S 35703 Citrobacter amalonaticus 0.00 4 4 S1 1261127 Citrobacter amalonaticus Y19 0.01 15 0 G 620 Shigella 0.01 15 15 S 623 Shigella flexneri 0.01 15 0 F1 191675 Enterobacteriaceae incertae sedis 0.01 15 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 6 0 F3 146507 aphid secondary symbionts 0.00 3 3 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 1 0 G 568988 Candidatus Regiella 0.00 1 0 G1 3077955 unclassified Candidatus Regiella 0.00 1 1 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 5 0 F3 84564 ant endosymbionts 0.00 4 0 G 203804 Candidatus Blochmanniella 0.00 2 2 S 251538 Candidatus Blochmannia ocreatus 0.00 1 1 S 251540 Candidatus Blochmannia vicinus 0.00 1 1 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 0 G 1699619 Candidatus Westeberhardia 0.00 1 1 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 2 0 G 1302410 Candidatus Annandia 0.00 2 2 S 1302411 Candidatus Annandia adelgestsuga 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 1 0 G 1906660 Candidatus Mikella 0.00 1 1 S 1778264 Candidatus Mikella endobia 0.01 14 0 G 1330547 Kosakonia 0.01 14 14 S 208223 Kosakonia cowanii 0.01 9 0 G 1177214 Candidatus Profftia 0.00 6 0 G1 2735709 unclassified Candidatus Profftia 0.00 6 6 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 3 3 S 1177216 Candidatus Profftia tarda 0.00 6 0 G 409304 Candidatus Ishikawella 0.00 6 0 S 168169 Candidatus Ishikawella capsulata 0.00 6 6 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 5 4 G 401618 Candidatus Riesia 0.00 1 1 S 401619 Candidatus Riesia pediculicola 0.00 4 0 G 413496 Cronobacter 0.00 4 4 S 413503 Cronobacter malonaticus 0.00 4 0 G 1903434 Atlantibacter 0.00 4 4 S 565 Atlantibacter hermannii 0.00 4 0 G 1330545 Lelliottia 0.00 4 4 S 61646 Lelliottia amnigena 0.00 3 0 G 1048757 Candidatus Moranella 0.00 3 3 S 1048758 Candidatus Moranella endobia 0.00 3 0 G 1081630 Candidatus Schneideria 0.00 3 3 S 1081631 Candidatus Schneideria nysicola 0.00 2 0 G 1649298 Siccibacter 0.00 2 2 S 1505757 Siccibacter colletis 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.00 1 0 G 2303321 Superficieibacter 0.00 1 0 G1 2645744 unclassified Superficieibacter 0.00 1 1 S 3031919 Superficieibacter sp. HKU1 0.48 661 56 F 1903409 Erwiniaceae 0.38 514 0 G 551 Erwinia 0.37 505 505 S 1922217 Candidatus Erwinia haradaeae 0.01 7 1 G1 2622719 unclassified Erwinia 0.00 6 6 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 65700 Erwinia tracheiphila 0.00 1 1 S 2681984 Erwinia sorbitola 0.06 82 70 G 53335 Pantoea 0.00 3 3 S 470934 Pantoea vagans 0.00 3 0 G1 1654067 Pantoea agglomerans group 0.00 3 3 S 549 Pantoea agglomerans 0.00 2 2 S 553 Pantoea ananatis 0.00 2 2 S 59814 Pantoea dispersa 0.00 1 1 S 1076550 Pantoea rwandensis 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.01 7 0 G 32199 Buchnera 0.01 7 7 S 9 Buchnera aphidicola 0.00 1 0 G 2100764 Mixta 0.00 1 1 S 1615494 Mixta intestinalis 0.00 1 0 G 3026546 Duffyella 0.00 1 1 S 1619313 Duffyella gerundensis 0.12 165 0 F 2812006 Bruguierivoracaceae 0.12 165 0 G 84565 Sodalis 0.12 159 159 S 2697027 Sodalis ligni 0.00 4 0 S 1486991 Candidatus Sodalis pierantonius 0.00 4 4 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 1 S 1239307 Sodalis praecaptivus 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.05 70 0 F 1903411 Yersiniaceae 0.04 56 0 G 613 Serratia 0.03 38 37 S 138074 Serratia symbiotica 0.00 1 1 S1 3066236 Serratia symbiotica (Periphyllus acericola) 0.01 13 0 S 82996 Serratia plymuthica 0.01 13 13 S1 1006598 Serratia plymuthica RVH1 0.00 2 2 S 61652 Serratia rubidaea 0.00 2 2 S 614 Serratia liquefaciens 0.00 1 0 S 2338073 Serratia inhibens 0.00 1 1 S1 1154756 Serratia inhibens PRI-2C 0.01 8 0 G 629 Yersinia 0.01 8 0 G1 1649845 Yersinia pseudotuberculosis complex 0.01 8 1 S 632 Yersinia pestis 0.00 3 3 S1 649716 Yersinia pestis Pestoides G 0.00 2 2 S1 748678 Yersinia pestis str. Pestoides B 0.00 2 2 S1 1035377 Yersinia pestis A1122 0.00 5 5 G 1927833 Candidatus Fukatsuia 0.00 1 0 G 1745211 Chania 0.00 1 0 S 1639108 Chania multitudinisentens 0.00 1 1 S1 1441930 Chania multitudinisentens RB-25 0.03 47 1 F 1903414 Morganellaceae 0.02 24 0 G 581 Morganella 0.02 24 24 S 582 Morganella morganii 0.01 16 2 G 637 Arsenophonus 0.00 6 6 S 634113 Candidatus Arsenophonus lipoptenae 0.00 4 4 S 2879119 Arsenophonus apicola 0.00 3 0 G1 2627083 unclassified Arsenophonus 0.00 2 2 S 3041619 Arsenophonus sp. aPb 0.00 1 1 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 1 1 S 638 Arsenophonus nasoniae 0.00 2 0 G 583 Proteus 0.00 2 2 S 584 Proteus mirabilis 0.00 2 2 G 626 Xenorhabdus 0.00 1 0 G 586 Providencia 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.00 1 1 G 29487 Photorhabdus 0.02 23 6 F 1903410 Pectobacteriaceae 0.01 12 0 G 204037 Dickeya 0.01 12 12 S 1089444 Dickeya solani 0.00 5 0 G 122277 Pectobacterium 0.00 2 2 S 1905730 Pectobacterium parmentieri 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 1 S 2488639 Pectobacterium versatile 0.00 1 1 S 2485124 Pectobacterium polonicum 0.00 3 0 F 1903412 Hafniaceae 0.00 3 3 G 635 Edwardsiella 0.00 3 0 F 1903416 Budviciaceae 0.00 3 0 G 82984 Pragia 0.00 3 3 S 82985 Pragia fontium 0.00 3 0 F 3120698 Gallaecimonadaceae 0.00 3 0 G 745410 Gallaecimonas 0.00 3 3 S 3029055 Gallaecimonas kandeliae 1.91 2614 1 O 72274 Pseudomonadales 1.91 2612 138 F 135621 Pseudomonadaceae 1.80 2458 1857 G 286 Pseudomonas 0.17 227 24 G1 196821 unclassified Pseudomonas 0.03 36 36 S 2954094 Pseudomonas sp. FP453 0.02 25 25 S 2931382 Pseudomonas sp. PIA16 0.02 25 25 S 2954092 Pseudomonas sp. FP2335 0.02 21 21 S 1649877 Pseudomonas sp. CCOS 191 0.01 15 15 S 2762896 Pseudomonas sp. MPDS 0.01 13 13 S 2705472 Pseudomonas sp. MTM4 0.01 8 8 S 2871095 Pseudomonas sp. DR48 0.01 8 8 S 2954088 Pseudomonas sp. FP2262 0.01 7 7 S 2954080 Pseudomonas sp. FP1762 0.00 6 6 S 3137451 Pseudomonas sp. G.S.17 0.00 5 5 S 2954078 Pseudomonas sp. FP1740 0.00 3 3 S 2895472 Pseudomonas sp. B21-012 0.00 3 3 S 2559074 Pseudomonas sp. S150 0.00 3 3 S 1500686 Pseudomonas sp. Os17 0.00 3 3 S 2954084 Pseudomonas sp. FP198 0.00 3 3 S 2954097 Pseudomonas sp. FP603 0.00 2 2 S 3020843 Pseudomonas sp. Q1-7 0.00 2 2 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 2 2 S 2662034 Pseudomonas sp. 13159349 0.00 2 2 S 2944392 Pseudomonas sp. BYT-5 0.00 2 2 S 2738843 Pseudomonas sp. B14-6 0.00 1 1 S 2954101 Pseudomonas sp. FP830 0.00 1 1 S 75692 Pseudomonas sp. 273 0.00 1 1 S 3139142 Pseudomonas sp. RC10 0.00 1 1 S 2748080 Pseudomonas sp. ABC1 0.00 1 1 S 2986927 Pseudomonas sp. BT-42-2 0.00 1 1 S 1881017 Pseudomonas sp. 7SR1 0.00 1 1 S 2083051 Pseudomonas sp. SWI6 0.00 1 1 S 2662033 Pseudomonas sp. NY5710 0.00 1 1 S 2895475 Pseudomonas sp. B21-019 0.07 97 0 G1 136841 Pseudomonas aeruginosa group 0.07 97 89 S 287 Pseudomonas aeruginosa 0.01 8 8 S1 381754 Pseudomonas aeruginosa PA7 0.04 61 3 G1 136845 Pseudomonas putida group 0.02 33 31 S 303 Pseudomonas putida 0.00 2 2 S1 1196325 Pseudomonas putida DOT-T1E 0.02 25 25 S 78327 Pseudomonas mosselii 0.04 58 58 S 2738125 Pseudomonas hefeiensis 0.04 56 1 G1 136843 Pseudomonas fluorescens group 0.02 25 9 S 47883 Pseudomonas synxantha 0.01 16 16 S1 96901 Pseudomonas synxantha BG33R 0.01 16 16 S 47878 Pseudomonas azotoformans 0.00 6 6 S 183795 Pseudomonas mediterranea 0.00 4 0 S 294 Pseudomonas fluorescens 0.00 4 4 S1 1038922 Pseudomonas fluorescens Q2-87 0.00 2 2 S 200450 Pseudomonas trivialis 0.00 1 1 S 76758 Pseudomonas orientalis 0.00 1 1 S 76761 Pseudomonas veronii 0.01 18 0 G1 136849 Pseudomonas syringae group 0.01 15 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.01 15 5 S 317 Pseudomonas syringae 0.01 7 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.01 7 7 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 3 3 S1 1357285 Pseudomonas syringae CC457 0.00 3 0 G2 251698 Pseudomonas syringae group genomosp. 2 0.00 2 2 S 47877 Pseudomonas amygdali 0.00 1 1 S 29438 Pseudomonas savastanoi 0.01 16 16 S 46677 Pseudomonas agarici 0.01 10 10 S 1302376 Candidatus Pseudomonas adelgestsugas 0.01 9 9 S 158627 Pseudomonas graminis 0.01 7 7 S 2599595 Pseudomonas eucalypticola 0.00 6 6 S 437900 Pseudomonas marincola 0.00 6 6 S 244566 Pseudomonas lurida 0.00 5 5 S 2219225 Pseudomonas asiatica 0.00 5 0 G1 136842 Pseudomonas chlororaphis group 0.00 3 3 S 380021 Pseudomonas protegens 0.00 2 2 S 296 Pseudomonas fragi 0.00 4 4 S 930166 Pseudomonas brassicacearum 0.00 2 2 S 702115 Pseudomonas arsenicoxydans 0.00 2 2 S 1198456 Pseudomonas guguanensis 0.00 2 2 S 2961893 Pseudomonas triclosanedens 0.00 2 2 S 65741 Pseudomonas knackmussii 0.00 2 2 S 485880 Pseudomonas kurunegalensis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 157783 Pseudomonas cremoricolorata 0.00 1 1 S 1245526 Pseudomonas guangdongensis 0.00 1 1 S 122355 Pseudomonas psychrophila 0.00 1 1 S 226910 Pseudomonas batumici 0.00 1 1 S 2762576 Pseudomonas baltica 0.00 4 0 G 2901164 Stutzerimonas 0.00 4 0 G1 136846 Stutzerimonas stutzeri group 0.00 3 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 3 3 S 316 Stutzerimonas stutzeri 0.00 1 1 S 74829 Stutzerimonas balearica 0.00 3 0 F1 351 Azotobacter group 0.00 3 3 G 352 Azotobacter 0.00 3 0 G 1654787 Thiopseudomonas 0.00 3 3 S 1697053 Thiopseudomonas alkaliphila 0.00 3 0 G 2758906 Entomomonas 0.00 2 2 S 2785331 Entomomonas asaccharolytica 0.00 1 1 S 2213226 Entomomonas moraniae 0.00 3 0 G 2901189 Halopseudomonas 0.00 2 2 S 797277 Halopseudomonas litoralis 0.00 1 1 S 1434072 Halopseudomonas salegens 0.00 1 0 F 2887365 Marinobacteraceae 0.00 1 0 G 2742 Marinobacter 0.00 1 1 S 1420917 Marinobacter salarius 0.61 829 2 O 135622 Alteromonadales 0.58 794 0 F 267888 Pseudoalteromonadaceae 0.57 783 0 G 2834759 Flocculibacter 0.57 783 783 S 2744479 Flocculibacter collagenilyticus 0.01 11 1 G 53246 Pseudoalteromonas 0.01 10 0 G1 194690 unclassified Pseudoalteromonas 0.01 9 9 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 1 S 2785910 Pseudoalteromonas sp. A41-2 0.01 19 0 F 267890 Shewanellaceae 0.01 19 2 G 22 Shewanella 0.01 13 12 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 2 2 S 332186 Shewanella xiamenensis 0.00 1 1 S 1028752 Shewanella aestuarii 0.00 1 1 S 2018305 Shewanella bicestrii 0.01 11 0 F 72275 Alteromonadaceae 0.00 5 0 F1 2903219 Alteromonas/Salinimonas group 0.00 5 0 G 226 Alteromonas 0.00 5 0 G1 2614992 unclassified Alteromonas 0.00 5 5 S 2267264 Alteromonas sp. RKMC-009 0.00 2 2 G 1858563 Alkalimarinus 0.00 2 0 G 2650549 Hydrocarboniclastica 0.00 2 2 S 2259620 Hydrocarboniclastica marina 0.00 1 1 G 261825 Agarivorans 0.00 1 0 G 2894574 Saccharobesus 0.00 1 1 S 2172099 Saccharobesus litoralis 0.00 1 0 F 267889 Colwelliaceae 0.00 1 0 G 1518149 Thalassotalea 0.00 1 1 S 349064 Thalassotalea agarivorans 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 0 S 90736 Moritella marina 0.00 1 1 S1 1202962 Moritella marina ATCC 15381 0.00 1 0 F 267892 Ferrimonadaceae 0.00 1 1 G 44011 Ferrimonas 0.39 533 0 O 2887326 Moraxellales 0.39 533 0 F 468 Moraxellaceae 0.38 514 247 G 469 Acinetobacter 0.07 95 12 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.05 74 73 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.01 7 3 S 48296 Acinetobacter pittii 0.00 4 4 S1 871585 Acinetobacter pittii PHEA-2 0.00 1 1 S 471 Acinetobacter calcoaceticus 0.00 1 1 S 1530123 Acinetobacter seifertii 0.04 54 54 S 756892 Acinetobacter indicus 0.03 42 2 G1 196816 unclassified Acinetobacter 0.02 26 26 S 3003393 Acinetobacter sp. TR11 0.00 5 5 S 1608473 Acinetobacter sp. NCu2D-2 0.00 3 3 S 3151496 Acinetobacter sp. ANC 7955 0.00 3 3 S 2919376 Acinetobacter sp. AOR07_HL 0.00 1 1 S 2714110 Acinetobacter sp. Marseille-Q1620 0.00 1 1 S 2929509 Acinetobacter sp. NyZ410 0.00 1 1 S 3045147 Acinetobacter sp. KCTC 92772 0.02 26 26 S 108981 Acinetobacter schindleri 0.01 14 14 S 202956 Acinetobacter towneri 0.01 11 11 S 2006115 Acinetobacter piscicola 0.01 9 9 S 40214 Acinetobacter johnsonii 0.01 8 8 S 487316 Acinetobacter soli 0.00 3 3 S 29430 Acinetobacter haemolyticus 0.00 1 1 S 1789224 Acinetobacter larvae 0.00 1 1 S 2662362 Acinetobacter wanghuae 0.00 1 1 S 70346 Acinetobacter variabilis 0.00 1 1 S 40215 Acinetobacter junii 0.00 1 0 S 52133 Acinetobacter venetianus 0.00 1 1 S1 1197884 Acinetobacter venetianus VE-C3 0.01 16 14 G 475 Moraxella 0.00 1 1 S 34062 Moraxella osloensis 0.00 1 1 S 2904120 Moraxella nasibovis 0.00 3 0 G 497 Psychrobacter 0.00 3 1 G1 196806 unclassified Psychrobacter 0.00 2 2 S 1415574 Psychrobacter sp. LV10R520-6 0.21 294 0 O 135623 Vibrionales 0.21 294 27 F 641 Vibrionaceae 0.18 241 140 G 662 Vibrio 0.03 41 0 S 52443 Vibrio tapetis 0.03 41 41 S1 1671868 Vibrio tapetis subsp. tapetis 0.02 23 23 S 2572923 Vibrio taketomensis 0.01 19 19 S 666 Vibrio cholerae 0.01 11 3 G1 2614977 unclassified Vibrio 0.00 6 6 S 2661921 Vibrio sp. THAF191c 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.00 5 0 G1 717610 Vibrio harveyi group 0.00 4 4 S 669 Vibrio harveyi 0.00 1 1 G2 2315253 Vibrio diabolicus subgroup 0.00 1 1 S 55601 Vibrio anguillarum 0.00 1 1 S 28173 Vibrio nigripulchritudo 0.02 23 7 G 657 Photobacterium 0.01 12 9 S 553611 Photobacterium leiognathi 0.00 3 3 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 3 1 S 38293 Photobacterium damselae 0.00 1 1 S1 38294 Photobacterium damselae subsp. piscicida 0.00 1 1 S1 85581 Photobacterium damselae subsp. damselae 0.00 1 1 G1 2628852 unclassified Photobacterium 0.00 3 0 G 511678 Aliivibrio 0.00 2 0 S 40269 Aliivibrio salmonicida 0.00 2 2 S1 316275 Aliivibrio salmonicida LFI1238 0.00 1 0 S 668 Aliivibrio fischeri 0.00 1 1 S1 1088719 Aliivibrio fischeri SR5 0.08 103 0 O 135624 Aeromonadales 0.08 103 1 F 84642 Aeromonadaceae 0.07 92 60 G 642 Aeromonas 0.02 27 27 S 654 Aeromonas veronii 0.00 3 3 S 648 Aeromonas caviae 0.00 1 1 S 652 Aeromonas schubertii 0.00 1 1 S 196024 Aeromonas dhakensis 0.00 5 0 G 43947 Tolumonas 0.00 4 0 G1 263764 environmental samples 0.00 4 4 S 263765 uncultured Tolumonas sp. 0.00 1 1 S 43948 Tolumonas auensis 0.00 4 0 G 225143 Oceanisphaera 0.00 4 4 S 1903694 Oceanisphaera avium 0.00 1 0 G 2802288 Dongshaea 0.00 1 1 S 2047966 Dongshaea marina 0.07 101 0 O 135625 Pasteurellales 0.07 101 7 F 712 Pasteurellaceae 0.06 79 2 G 724 Haemophilus 0.05 68 68 S 729 Haemophilus parainfluenzae 0.01 7 7 S 727 Haemophilus influenzae 0.00 2 2 S 726 Haemophilus haemolyticus 0.00 5 0 G 713 Actinobacillus 0.00 5 0 S 718 Actinobacillus equuli 0.00 5 5 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 0 G 745 Pasteurella 0.00 2 1 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.00 2 0 G 75984 Mannheimia 0.00 1 1 S 85402 Mannheimia granulomatis 0.00 1 1 S 85404 Mannheimia varigena 0.00 2 1 G 292486 Avibacterium 0.00 1 1 S 728 Avibacterium paragallinarum 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 0.00 1 0 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 1 0 G 214906 Histophilus 0.00 1 1 S 731 Histophilus somni 0.03 40 0 O 135618 Methylococcales 0.03 35 2 F 403 Methylococcaceae 0.02 21 0 G 39773 Methylomicrobium 0.02 21 0 S 39775 Methylomicrobium album 0.02 21 21 S1 686340 Methylomicrobium album BG8 0.00 5 0 G 1295378 Methylogaea 0.00 5 5 S 1295382 Methylogaea oryzae 0.00 2 0 G 429 Methylobacter 0.00 2 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2839024 Methylobacter sp. S3L5C 0.00 1 1 S 2911520 Methylobacter sp. YRD-M1 0.00 1 1 G 416 Methylomonas 0.00 1 0 G 73778 Methylocaldum 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.00 1 0 G 2822410 Methylotuvimicrobium 0.00 1 1 S 95641 Methylotuvimicrobium buryatense 0.00 1 0 G 3135206 Candidatus Methylocalor 0.00 1 1 S 3108543 Candidatus Methylocalor cossyra 0.00 5 0 F 1486721 Methylothermaceae 0.00 5 5 G 1486720 Methylomarinovum 0.03 38 0 O 135619 Oceanospirillales 0.02 21 2 F 135620 Oceanospirillaceae 0.01 9 0 G 267849 Nitrincola 0.01 9 9 S 2614693 Nitrincola iocasae 0.01 8 2 G 28253 Marinomonas 0.00 6 6 S 2773454 Marinomonas algicola 0.00 2 0 G 1537406 Bacterioplanes 0.00 2 2 S 1249553 Bacterioplanes sanyensis 0.01 10 1 F 28256 Halomonadaceae 0.00 6 1 G 2745 Halomonas 0.00 3 3 S 3031727 Halomonas piscis 0.00 2 0 G1 2609666 unclassified Halomonas 0.00 2 2 S 2982692 Halomonas sp. M4R1S46 0.00 2 0 F1 114403 Zymobacter group 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 0 S 114186 Candidatus Carsonella ruddii 0.00 1 1 S1 1202539 Candidatus Carsonella ruddii HT isolate Thao2000 0.00 1 0 G 235572 Candidatus Portiera 0.00 1 1 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 204286 Cobetia 0.00 1 0 G1 2609414 unclassified Cobetia 0.00 1 1 S 2686360 Cobetia sp. L2A1 0.00 4 0 F 2823145 Pleioneaceae 0.00 4 0 G 1502941 Pleionea 0.00 4 4 S 3070815 Pleionea litopenaei 0.00 1 1 F 224372 Alcanivoracaceae 0.00 1 0 F 224379 Hahellaceae 0.00 1 1 G 158481 Hahella 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.02 32 0 O 135615 Cardiobacteriales 0.02 30 0 F 868 Cardiobacteriaceae 0.02 27 0 G 13275 Suttonella 0.02 27 0 G1 2908647 unclassified Suttonella 0.02 27 27 S 2908648 Suttonella sp. R2A3 0.00 3 0 G 2717 Cardiobacterium 0.00 3 0 G1 2648856 unclassified Cardiobacterium 0.00 3 3 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 2 0 F 3018589 Ignatzschineriaceae 0.00 1 0 G 112008 Ignatzschineria 0.00 1 1 S 2923279 Ignatzschineria rhizosphaerae 0.00 1 0 G 582472 Wohlfahrtiimonas 0.00 1 1 S 400946 Wohlfahrtiimonas chitiniclastica 0.02 30 0 O 135613 Chromatiales 0.02 26 1 F 1046 Chromatiaceae 0.01 9 1 G 67575 Rheinheimera 0.01 8 0 G1 115860 unclassified Rheinheimera 0.01 7 7 S 1763998 Rheinheimera sp. F8 0.00 1 1 S 3072790 Rheinheimera sp. MMS21-TC3 0.01 8 0 G 2828366 Caldichromatium 0.01 8 8 S 2699430 Caldichromatium japonicum 0.00 5 5 G 1056 Thiocapsa 0.00 2 0 G 2796146 Candidatus Nitrosacidococcus 0.00 2 2 S 553981 Candidatus Nitrosacidococcus tergens 0.00 1 1 G 1227 Nitrosococcus 0.00 4 0 F 72276 Ectothiorhodospiraceae 0.00 2 0 G 85108 Halorhodospira 0.00 2 0 S 1053 Halorhodospira halophila 0.00 2 2 S1 349124 Halorhodospira halophila SL1 0.00 1 1 G 106633 Thioalkalivibrio 0.00 1 0 G 1335745 Spiribacter 0.00 1 0 S 1335746 Spiribacter salinus 0.00 1 1 S1 1260251 Spiribacter salinus M19-40 0.02 27 0 O 1240482 Orbales 0.02 27 0 F 1240483 Orbaceae 0.02 27 0 G 2894762 Zophobihabitans 0.02 27 27 S 1635327 Zophobihabitans entericus 0.02 26 1 O 72273 Thiotrichales 0.01 9 0 F 135617 Thiotrichaceae 0.00 5 2 G 1030 Thiothrix 0.00 2 2 S 525917 Thiothrix lacustris 0.00 1 1 S 96472 Thiothrix winogradskyi 0.00 4 0 G 1021 Beggiatoa 0.00 4 4 S 288004 Beggiatoa leptomitoformis 0.01 7 3 F 34064 Francisellaceae 0.00 4 2 G 262 Francisella 0.00 1 0 S 263 Francisella tularensis 0.00 1 1 S1 119856 Francisella tularensis subsp. tularensis 0.00 1 1 S 299583 Francisella orientalis 0.00 6 0 F 135616 Piscirickettsiaceae 0.00 3 3 G 34067 Cycloclasticus 0.00 1 0 G 933 Thiomicrospira 0.00 1 0 G1 2643099 unclassified Thiomicrospira 0.00 1 1 S 3035472 Thiomicrospira sp. R3 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 1 G 2039723 Thiomicrorhabdus 0.00 3 0 F 2056687 Fastidiosibacteraceae 0.00 3 0 G 2056696 Cysteiniphilum 0.00 3 0 G1 2610889 unclassified Cysteiniphilum 0.00 3 3 S 2975055 Cysteiniphilum sp. QT6929 0.01 14 0 O 118969 Legionellales 0.01 9 2 F 118968 Coxiellaceae 0.00 5 0 G 254245 Aquicella 0.00 4 4 S 254247 Aquicella siphonis 0.00 1 1 S 254246 Aquicella lusitana 0.00 1 0 G 776 Coxiella 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.00 5 0 F 444 Legionellaceae 0.00 5 1 G 445 Legionella 0.00 3 0 S 446 Legionella pneumophila 0.00 3 2 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 1 1 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 1 1 S 450 Legionella longbeachae 0.01 14 0 O 2975284 Candidatus Comchoanobacterales 0.01 14 0 F 2975285 Candidatus Comchoanobacteraceae 0.01 14 0 G 2975286 Candidatus Comchoanobacter 0.01 14 14 S 2919598 Candidatus Comchoanobacter bicostacola 0.01 8 0 O 1706369 Cellvibrionales 0.00 5 0 F 1706371 Cellvibrionaceae 0.00 3 0 G 10 Cellvibrio 0.00 3 0 G1 2624793 unclassified Cellvibrio 0.00 3 3 S 1987723 Cellvibrio sp. PSBB006 0.00 2 2 G 2425 Teredinibacter 0.00 2 0 F 1706372 Halieaceae 0.00 2 0 G 3040948 Candidatus Paraluminiphilus 0.00 2 2 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 6 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 5 0 G 1076625 Candidatus Steffania 0.00 5 5 S 1076626 Candidatus Steffania adelgidicola 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1971485 Candidatus Nardonella dryophthoridicola 0.00 3 0 O 2887327 Kangiellales 0.00 3 0 F 1920240 Kangiellaceae 0.00 3 0 G 261963 Kangiella 0.00 3 3 S 1144748 Kangiella sediminilitoris 0.00 2 0 O 3084968 Thiohalomonadales 0.00 2 0 F 3084969 Thiohalomonadaceae 0.00 2 0 G 2034504 Sulfurivermis 0.00 2 2 S 1972068 Sulfurivermis fontis 0.00 2 0 O 3085109 Thiohalobacterales 0.00 2 0 F 3085110 Thiohalobacteraceae 0.00 2 2 G 1273155 Thiohalobacter 0.00 1 0 O 1775403 Nevskiales 0.00 1 0 F 568386 Nevskiaceae 0.00 1 0 G 413435 Solimonas 0.00 1 0 G1 2637139 unclassified Solimonas 0.00 1 1 S 2303331 Solimonas sp. K1W22B-7 5.63 7701 77 C 28216 Betaproteobacteria 4.99 6834 65 O 80840 Burkholderiales 3.58 4900 328 F 75682 Oxalobacteraceae 2.26 3099 61 G 401469 Undibacterium 2.21 3022 615 G1 2630295 unclassified Undibacterium 1.76 2407 2407 S 3048609 Undibacterium sp. CCC3.4 0.01 15 15 S 401471 Undibacterium parvum 0.00 1 1 S 3073561 Undibacterium cyanobacteriorum 0.95 1301 1208 G 29580 Janthinobacterium 0.06 87 0 G1 2610881 unclassified Janthinobacterium 0.06 80 80 S 3065910 Janthinobacterium sp. J1-1 0.00 6 6 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 2861284 Janthinobacterium sp. PAMC25594 0.00 5 5 S 2590869 Janthinobacterium tructae 0.00 1 1 S 29581 Janthinobacterium lividum 0.08 104 68 F1 2895353 Telluria group 0.02 32 6 G 149698 Massilia 0.01 19 1 G1 2609279 unclassified Massilia 0.01 10 10 S 1707785 Massilia sp. WG5 0.00 4 4 S 2709303 Massilia sp. Se16.2.3 0.00 4 4 S 3126507 Massilia sp. W12 0.00 4 4 S 457921 Massilia varians 0.00 2 2 S 945844 Massilia oculi 0.00 1 1 S 2899220 Massilia endophytica 0.00 2 0 G 75654 Duganella 0.00 2 2 S 2728021 Duganella dendranthematis 0.00 2 1 G 1522432 Pseudoduganella 0.00 1 0 G1 2637179 unclassified Pseudoduganella 0.00 1 1 S 2995154 Pseudoduganella sp. SL102 0.04 51 0 G 884214 Candidatus Zinderia 0.04 51 0 G1 3077950 unclassified Candidatus Zinderia 0.04 51 51 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 5 0 G 1229970 Glaciimonas 0.00 5 0 G1 2644401 unclassified Glaciimonas 0.00 5 5 S 2807626 Glaciimonas sp. PAMC28666 0.00 4 1 G 963 Herbaspirillum 0.00 2 0 S 341045 Herbaspirillum hiltneri 0.00 2 2 S1 1262470 Herbaspirillum hiltneri N3 0.00 1 1 S 863372 Herbaspirillum huttiense 0.00 4 0 G 1344552 Noviherbaspirillum 0.00 4 0 G1 2617509 unclassified Noviherbaspirillum 0.00 4 4 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 3 0 G 1051898 Actimicrobium 0.00 3 0 G1 2624959 unclassified Actimicrobium 0.00 3 3 S 3048606 Actimicrobium sp. CCC2.4 0.00 1 1 G 202907 Collimonas 1.07 1463 12 F 119060 Burkholderiaceae 0.84 1155 0 G 47670 Lautropia 0.84 1155 1155 S 47671 Lautropia mirabilis 0.08 116 1 G 32008 Burkholderia 0.05 74 1 G1 87882 Burkholderia cepacia complex 0.03 45 45 S 152500 Burkholderia dolosa 0.01 14 14 S 60552 Burkholderia vietnamiensis 0.01 7 7 S 95485 Burkholderia stabilis 0.00 3 3 S 87883 Burkholderia multivorans 0.00 3 3 S 292 Burkholderia cepacia 0.00 1 0 S 95486 Burkholderia cenocepacia 0.00 1 1 S1 1055524 Burkholderia cenocepacia H111 0.03 37 0 G1 111527 pseudomallei group 0.03 35 1 S 28450 Burkholderia pseudomallei 0.02 32 32 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S1 1249470 Burkholderia pseudomallei MSHR1079 0.00 1 1 S1 557724 Burkholderia pseudomallei 576 0.00 2 0 S 57975 Burkholderia thailandensis 0.00 2 2 S1 1249664 Burkholderia thailandensis 34 0.00 4 0 G1 2613784 unclassified Burkholderia 0.00 4 4 S 1494466 Burkholderia sp. FERM BP-3421 0.08 114 1 G 48736 Ralstonia 0.08 104 0 G1 3116862 Ralstonia solanacearum species complex 0.08 104 104 S 305 Ralstonia solanacearum 0.00 5 0 G1 209769 unclassified Ralstonia 0.00 4 4 S 2880990 Ralstonia sp. RS650 0.00 1 1 S 1380362 Ralstonia sp. UNC404CL21Col 0.00 4 4 S 105219 Ralstonia mannitolilytica 0.03 42 6 G 44013 Polynucleobacter 0.02 34 34 S 576610 Polynucleobacter necessarius 0.00 2 2 S 556054 Polynucleobacter difficilis 0.01 12 0 G 1822464 Paraburkholderia 0.01 12 12 S 2571748 Paraburkholderia acidisoli 0.00 6 1 G 106589 Cupriavidus 0.00 4 4 S 367825 Cupriavidus malaysiensis 0.00 1 1 S 164546 Cupriavidus taiwanensis 0.00 3 3 G 93217 Pandoraea 0.00 2 0 G 2680021 Ephemeroptericola 0.00 2 2 S 2268024 Ephemeroptericola cinctiostellae 0.00 1 1 G 131079 Limnobacter 0.26 356 29 F 80864 Comamonadaceae 0.14 191 191 G 80865 Delftia 0.05 71 0 G 283 Comamonas 0.05 66 0 S 32013 Comamonas terrigena 0.05 66 66 S1 1219032 Comamonas terrigena NBRC 13299 0.00 2 2 S 2743470 Comamonas antarctica 0.00 1 1 S 225991 Comamonas aquatica 0.00 1 1 S 379895 Comamonas odontotermitis 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2853257 Comamonas sp. Y33R10-2 0.02 27 21 G 34072 Variovorax 0.00 4 2 S 34073 Variovorax paradoxus 0.00 2 2 S1 595537 Variovorax paradoxus EPS 0.00 2 2 G1 663243 unclassified Variovorax 0.01 10 0 G 665874 Limnohabitans 0.01 10 0 G1 2626134 unclassified Limnohabitans 0.01 7 7 S 1678128 Limnohabitans sp. 63ED37-2 0.00 3 3 S 1678129 Limnohabitans sp. 103DPR2 0.01 7 5 G 47420 Hydrogenophaga 0.00 1 1 S 47421 Hydrogenophaga pseudoflava 0.00 1 1 S 2716225 Hydrogenophaga crocea 0.00 6 0 G 3051137 Paracidovorax 0.00 6 6 S 80867 Paracidovorax avenae 0.00 5 0 G 232523 Hylemonella 0.00 5 5 S 80880 Hylemonella gracilis 0.00 2 0 G 1649468 Melaminivora 0.00 2 2 S 2109913 Melaminivora suipulveris 0.00 2 1 G 28065 Rhodoferax 0.00 1 1 S 2798804 Rhodoferax lithotrophicus 0.00 2 0 G 52972 Polaromonas 0.00 2 2 S 37448 Polaromonas vacuolata 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.00 1 0 G 238749 Diaphorobacter 0.00 1 1 S 3036128 Diaphorobacter limosus 0.02 24 2 F 506 Alcaligenaceae 0.00 5 0 G 290425 Advenella 0.00 5 5 S 1481665 Advenella alkanexedens 0.00 4 3 G 517 Bordetella 0.00 1 1 S 521 Bordetella avium 0.00 4 0 G 1472344 Basilea 0.00 4 0 S 1472345 Basilea psittacipulmonis 0.00 4 4 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 3 1 G 90243 Oligella 0.00 2 2 S 90244 Oligella ureolytica 0.00 3 0 G 1100891 Paenalcaligenes 0.00 3 3 S 2980099 Paenalcaligenes faecalis 0.00 2 0 G 222 Achromobacter 0.00 2 2 S 217204 Achromobacter insolitus 0.00 1 0 G 29574 Taylorella 0.00 1 0 S 84590 Taylorella asinigenitalis 0.00 1 1 S1 1008459 Taylorella asinigenitalis MCE3 0.01 11 0 F 2975441 Sphaerotilaceae 0.00 5 0 G 34102 Sphaerotilus 0.00 5 5 S 2914710 Sphaerotilus microaerophilus 0.00 2 0 G 93681 Roseateles 0.00 1 0 G1 2626991 unclassified Roseateles 0.00 1 1 S 2714952 Roseateles sp. DAIF2 0.00 1 1 S 2978473 Roseateles amylovorans 0.00 2 0 G 1114981 Piscinibacter 0.00 2 2 S 946333 Piscinibacter gummiphilus 0.00 1 1 G 196013 Caldimonas 0.00 1 0 G 644355 Inhella 0.00 1 1 S 392593 Inhella inkyongensis 0.01 10 3 F 995019 Sutterellaceae 0.00 3 1 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.00 1 1 S 2494234 Sutterella megalosphaeroides 0.00 2 0 G 1918598 Turicimonas 0.00 2 2 S 1796652 Turicimonas muris 0.00 2 0 G 1980697 Duodenibacillus 0.00 2 2 S 1852381 Duodenibacillus massiliensis 0.00 5 0 O1 224471 Burkholderiales genera incertae sedis 0.00 3 0 G 114248 Tepidimonas 0.00 3 3 S 307486 Tepidimonas taiwanensis 0.00 1 1 G 32012 Thiomonas 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.49 664 2 O 206351 Neisseriales 0.46 631 275 F 481 Neisseriaceae 0.24 328 137 G 482 Neisseria 0.05 73 73 S 495 Neisseria elongata 0.04 48 45 S 487 Neisseria meningitidis 0.00 3 3 S1 942513 Neisseria meningitidis WUE 2594 0.03 38 38 S 485 Neisseria gonorrhoeae 0.02 21 21 S 28449 Neisseria subflava 0.00 3 3 S 486 Neisseria lactamica 0.00 3 3 S 1853278 Neisseria chenwenguii 0.00 2 2 S 607712 Neisseria shayeganii 0.00 2 0 G1 2623750 unclassified Neisseria 0.00 1 1 S 2912675 Neisseria sp. Dent CA1/247 0.00 1 1 S 2972775 Neisseria sp. Marseille-Q5346 0.00 1 1 S 267212 Neisseria bacilliformis 0.01 9 0 G 2593687 Aquella 0.01 9 9 S 2067065 Aquella oligotrophica 0.00 4 4 G 59 Vitreoscilla 0.00 4 0 G 334107 Conchiformibius 0.00 4 4 S 153493 Conchiformibius steedae 0.00 3 0 G 32257 Kingella 0.00 2 2 S 505 Kingella oralis 0.00 1 1 S 1522312 Kingella negevensis 0.00 2 0 G 71 Simonsiella 0.00 2 2 S 72 Simonsiella muelleri 0.00 2 0 G 538 Eikenella 0.00 2 2 S 539 Eikenella corrodens 0.00 2 0 G 2944815 Wielerella 0.00 2 2 S 2917790 Wielerella bovis 0.00 1 1 G 299568 Uruburuella 0.00 1 0 G 2898489 Paralysiella 0.00 1 1 S 2809020 Paralysiella testudinis 0.02 27 0 F 2897176 Aquaspirillaceae 0.02 27 0 G 57479 Microvirgula 0.02 27 27 S 57480 Microvirgula aerodenitrificans 0.00 3 0 F 1499392 Chromobacteriaceae 0.00 2 0 G 57739 Vogesella 0.00 2 0 G1 2684990 unclassified Vogesella 0.00 2 2 S 1192162 Vogesella sp. LIG4 0.00 1 0 G 400060 Paludibacterium 0.00 1 1 G1 2618429 unclassified Paludibacterium 0.00 1 0 F 2897177 Chitinibacteraceae 0.00 1 0 G 240411 Chitinimonas 0.00 1 1 S 2594795 Chitinimonas arctica 0.06 88 19 O 32003 Nitrosomonadales 0.02 25 12 F 206379 Nitrosomonadaceae 0.01 13 8 G 914 Nitrosomonas 0.00 4 4 S 44577 Nitrosomonas ureae 0.00 1 0 S 916 Nitrosomonas eutropha 0.00 1 1 S1 335283 Nitrosomonas eutropha C91 0.01 20 0 F 2008793 Sterolibacteriaceae 0.01 14 0 G 3050898 Sulfuricystis 0.01 10 10 S 2496847 Sulfuricystis thermophila 0.00 4 4 S 2211108 Sulfuricystis multivorans 0.00 5 0 G 311181 Denitratisoma 0.00 5 5 S 311182 Denitratisoma oestradiolicum 0.00 1 0 G 1914449 Rugosibacter 0.00 1 1 S 1565605 Rugosibacter aromaticivorans 0.01 14 1 F 90627 Gallionellaceae 0.01 12 0 G 2249462 Ferrigenium 0.01 12 12 S 1682490 Ferrigenium kumadai 0.00 1 0 G 2943286 Sideroxyarcus 0.00 1 1 S 2764705 Sideroxyarcus emersonii 0.01 7 0 F 2008790 Thiobacillaceae 0.01 7 0 G 1938335 Sulfuritortus 0.01 7 7 S 1914471 Sulfuritortus calidifontis 0.00 2 0 F 2772226 Sulfuricellaceae 0.00 1 0 G 935200 Sulfuricella 0.00 1 0 S 649841 Sulfuricella denitrificans 0.00 1 1 S1 1163617 Sulfuricella denitrificans skB26 0.00 1 0 G 1778653 Sulfuriferula 0.00 1 1 S 171865 Sulfuriferula plumbiphila 0.00 1 0 F 32011 Methylophilaceae 0.00 1 1 G 81682 Methylovorus 0.01 18 0 O 206389 Rhodocyclales 0.01 8 1 F 2008794 Zoogloeaceae 0.01 7 0 G 2891294 Nitrogeniibacter 0.01 7 7 S 2016596 Nitrogeniibacter mangrovi 0.01 7 0 F 75787 Rhodocyclaceae 0.00 3 0 G 146937 Azospira 0.00 2 2 S 404405 Azospira restricta 0.00 1 1 S 2785627 Azospira inquinata 0.00 3 0 G 1911577 Oryzomicrobium 0.00 3 3 S 1735038 Oryzomicrobium terrae 0.00 1 0 G 83766 Propionivibrio 0.00 1 0 G1 334579 environmental samples 0.00 1 1 S 426737 uncultured Propionivibrio sp. 0.00 3 0 F 2008795 Azonexaceae 0.00 3 0 G 88875 Ferribacterium 0.00 3 3 S 76259 Ferribacterium limneticum 0.01 17 0 C1 119066 Betaproteobacteria incertae sedis 0.01 7 0 G 1301080 Candidatus Nasuia 0.01 7 7 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 6 4 G 1381133 Candidatus Profftella 0.00 2 2 S 669502 Candidatus Profftella armatura 0.00 4 1 G 33055 Candidatus Kinetoplastibacterium 0.00 2 2 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 1 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.00 1 1 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 0.00 3 0 O 1442155 Ferrovales 0.00 3 0 F 1442156 Ferrovaceae 0.00 3 0 G 416212 Ferrovum 0.00 3 3 S 416213 Ferrovum myxofaciens 0.00 5 0 C 1807140 Acidithiobacillia 0.00 5 0 O 225057 Acidithiobacillales 0.00 5 0 F 225058 Acidithiobacillaceae 0.00 5 5 G 119977 Acidithiobacillus 25.46 34848 1225 D1 1783272 Terrabacteria group 12.73 17430 126 P 1239 Bacillota 9.38 12839 212 C 91061 Bacilli 5.10 6974 77 O 186826 Lactobacillales 2.41 3295 1 F 1300 Streptococcaceae 2.38 3264 2183 G 1301 Streptococcus 0.36 489 423 S 1308 Streptococcus thermophilus 0.04 54 54 S1 767463 Streptococcus thermophilus ND03 0.01 12 12 S1 322159 Streptococcus thermophilus LMD-9 0.06 79 72 S 1311 Streptococcus agalactiae 0.01 7 7 S1 1203670 Streptococcus agalactiae GD201008-001 0.06 77 5 G1 2608887 unclassified Streptococcus 0.05 69 69 S 3098075 Streptococcus sp. S1 0.00 2 2 S 2664091 Streptococcus sp. zg-86 0.00 1 1 S 3028082 Streptococcus sp. 29896 0.05 73 73 S 68892 Streptococcus infantis 0.05 69 67 S 1314 Streptococcus pyogenes 0.00 2 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 2 2 S2 160491 Streptococcus pyogenes str. Manfredo 0.05 66 45 S 1313 Streptococcus pneumoniae 0.01 16 16 S1 1159083 Streptococcus pneumoniae PCS8235 0.00 3 3 S1 869311 Streptococcus pneumoniae SPN032672 0.00 2 2 S1 516950 Streptococcus pneumoniae CGSP14 0.04 50 50 S 2490633 Streptococcus periodonticum 0.02 24 24 S 1341 Streptococcus ratti 0.01 19 19 S 1304 Streptococcus salivarius 0.01 18 18 S 1111760 Streptococcus troglodytae 0.01 15 15 S 1345 Streptococcus ferus 0.01 14 0 G1 671232 Streptococcus anginosus group 0.01 8 8 S 1328 Streptococcus anginosus 0.00 6 3 S 1338 Streptococcus intermedius 0.00 3 3 S1 862967 Streptococcus intermedius B196 0.01 14 14 S 82348 Streptococcus pluranimalium 0.01 10 10 S 1348 Streptococcus parauberis 0.01 8 8 S 1326 Streptococcus acidominimus 0.01 8 8 S 1811193 Streptococcus pantholopis 0.01 8 0 G1 119603 Streptococcus dysgalactiae group 0.00 6 2 S 1334 Streptococcus dysgalactiae 0.00 3 3 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 1 1 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 2 2 S 1336 Streptococcus equi 0.01 7 6 S 1307 Streptococcus suis 0.00 1 1 S1 1340847 Streptococcus suis T15 0.01 7 7 S 1310 Streptococcus sobrinus 0.00 5 5 S 1305 Streptococcus sanguinis 0.00 4 4 S 59310 Streptococcus macedonicus 0.00 3 3 S 102886 Streptococcus didelphis 0.00 2 2 S 400065 Streptococcus merionis 0.00 2 2 S 2686210 Streptococcus ruminicola 0.00 2 0 S 1303 Streptococcus oralis 0.00 2 2 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 2 2 S 1335 Streptococcus equinus 0.00 2 2 S 1346 Streptococcus iniae 0.00 1 1 S 2021971 Streptococcus respiraculi 0.00 1 1 S 1501662 Streptococcus parasuis 0.00 1 1 S 2173853 Streptococcus chenjunshii 0.00 1 1 S 1302 Streptococcus gordonii 0.02 30 0 G 1357 Lactococcus 0.02 29 29 S 1366 Lactococcus raffinolactis 0.00 1 1 S 1359 Lactococcus cremoris 1.25 1707 0 F 81852 Enterococcaceae 1.24 1701 57 G 1350 Enterococcus 1.13 1550 1534 S 1351 Enterococcus faecalis 0.01 16 16 S1 1201292 Enterococcus faecalis ATCC 29212 0.06 76 76 S 1352 Enterococcus faecium 0.01 10 8 S 1354 Enterococcus hirae 0.00 2 2 S1 768486 Enterococcus hirae ATCC 9790 0.00 3 3 S 37734 Enterococcus casseliflavus 0.00 3 3 S 44008 Enterococcus cecorum 0.00 2 2 S 417368 Enterococcus thailandicus 0.00 6 0 G 51668 Tetragenococcus 0.00 4 4 S 51669 Tetragenococcus halophilus 0.00 1 1 S 290335 Tetragenococcus koreensis 0.00 1 1 S 526944 Tetragenococcus osmophilus 0.98 1335 27 F 33958 Lactobacillaceae 0.36 494 415 G 46255 Weissella 0.03 38 38 S 137591 Weissella cibaria 0.01 11 11 S 1631871 Weissella jogaejeotgali 0.01 9 9 S 1249 Weissella paramesenteroides 0.01 9 9 S 1162633 Weissella diestrammenae 0.00 6 6 S 1583 Weissella confusa 0.00 3 3 S 155866 Weissella soli 0.00 2 2 S 759620 Weissella ceti 0.00 1 1 S 165096 Weissella koreensis 0.32 436 250 G 1578 Lactobacillus 0.10 141 126 S 1584 Lactobacillus delbrueckii 0.01 13 10 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 2 2 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.00 1 1 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 0 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 1 1 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.01 11 11 S 83683 Lactobacillus amylolyticus 0.01 10 10 S 1579 Lactobacillus acidophilus 0.00 6 6 S 47770 Lactobacillus crispatus 0.00 5 5 S 303541 Lactobacillus apis 0.00 3 3 S 33959 Lactobacillus johnsonii 0.00 3 3 G1 2620435 unclassified Lactobacillus 0.00 2 2 S 151781 Lactobacillus intestinalis 0.00 1 1 S 109790 Lactobacillus jensenii 0.00 1 1 S 508451 Lactobacillus taiwanensis 0.00 1 1 S 267818 Lactobacillus kefiranofaciens 0.00 1 1 S 1600 Lactobacillus acetotolerans 0.00 1 0 S 1587 Lactobacillus helveticus 0.00 1 1 S1 880633 Lactobacillus helveticus R0052 0.08 113 3 G 2742598 Limosilactobacillus 0.07 93 93 S 1613 Limosilactobacillus fermentum 0.01 12 12 S 97478 Limosilactobacillus mucosae 0.00 5 5 S 1598 Limosilactobacillus reuteri 0.07 102 2 G 2767887 Ligilactobacillus 0.07 91 91 S 1623 Ligilactobacillus ruminis 0.00 4 4 S 89059 Ligilactobacillus acidipiscis 0.00 2 2 S 1606 Ligilactobacillus aviarius 0.00 2 2 S 1624 Ligilactobacillus salivarius 0.00 1 1 S 1605 Ligilactobacillus animalis 0.04 61 58 G 1243 Leuconostoc 0.00 2 2 S 1246 Leuconostoc lactis 0.00 1 1 S 255248 Leuconostoc garlicum 0.02 22 0 G 2767886 Levilactobacillus 0.02 21 21 S 1580 Levilactobacillus brevis 0.00 1 1 S 2292255 Levilactobacillus suantsaii 0.02 21 2 G 2759736 Lacticaseibacillus 0.01 17 14 S 1597 Lacticaseibacillus paracasei 0.00 3 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 3 3 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.00 2 2 S 3025672 Lacticaseibacillus pabuli 0.01 18 0 G 2767842 Lactiplantibacillus 0.01 12 10 S 1590 Lactiplantibacillus plantarum 0.00 2 2 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 6 6 S 1589 Lactiplantibacillus pentosus 0.01 11 10 G 2767893 Lentilactobacillus 0.00 1 0 S 1581 Lentilactobacillus buchneri 0.00 1 0 S1 2737512 Lentilactobacillus buchneri subsp. silagei 0.00 1 1 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 0.01 10 0 G 2930384 Periweissella 0.01 10 10 S 2506420 Periweissella cryptocerci 0.00 6 5 G 2767877 Apilactobacillus 0.00 1 1 S 148814 Apilactobacillus kunkeei 0.00 4 3 G 2767889 Loigolactobacillus 0.00 1 1 S 1610 Loigolactobacillus coryniformis 0.00 4 0 G 2767881 Fructilactobacillus 0.00 3 3 S 1625 Fructilactobacillus sanfranciscensis 0.00 1 1 S 1614 Fructilactobacillus fructivorans 0.00 2 1 G 1253 Pediococcus 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.00 2 0 G 2767874 Acetilactobacillus 0.00 2 2 S 1720083 Acetilactobacillus jinshanensis 0.00 1 0 G 2767884 Lapidilactobacillus 0.00 1 1 S 51664 Lapidilactobacillus dextrinicus 0.00 1 1 G 2767878 Bombilactobacillus 0.25 338 0 F 186828 Carnobacteriaceae 0.24 327 0 G 117563 Granulicatella 0.18 251 251 S 46124 Granulicatella adiacens 0.06 76 76 S 137732 Granulicatella elegans 0.00 4 0 G 191769 Marinilactibacillus 0.00 4 0 G1 2632303 unclassified Marinilactibacillus 0.00 4 4 S 1911586 Marinilactibacillus sp. 15R 0.00 3 3 G 2747 Carnobacterium 0.00 3 0 G 82800 Desemzia 0.00 3 3 S 82801 Desemzia incerta 0.00 1 1 G 29393 Dolosigranulum 0.16 222 4 F 186827 Aerococcaceae 0.08 105 0 G 66831 Facklamia 0.08 105 105 S 178214 Facklamia hominis 0.07 97 92 G 1375 Aerococcus 0.00 2 2 S 1376 Aerococcus urinae 0.00 2 2 S 2976810 Aerococcus mictus 0.00 1 1 S 87541 Aerococcus christensenii 0.01 11 11 G 13075 Globicatella 0.00 4 0 G 89092 Ignavigranum 0.00 4 4 S 89093 Ignavigranum ruoffiae 0.00 1 0 G 2862144 Ruoffia 0.00 1 1 S 87458 Ruoffia tabacinasalis 4.13 5653 171 O 1385 Bacillales 1.96 2689 59 F 186817 Bacillaceae 1.42 1949 452 G 1386 Bacillus 0.62 851 43 G1 86661 Bacillus cereus group 0.19 265 201 S 1428 Bacillus thuringiensis 0.02 23 23 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 15 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.01 15 15 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.01 9 9 S1 1217737 Bacillus thuringiensis HD-789 0.00 5 5 S1 1423143 Bacillus thuringiensis Bt18247 0.00 4 4 S1 180850 Bacillus thuringiensis serovar indiana 0.00 3 3 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 3 3 S1 529122 Bacillus thuringiensis YBT-1518 0.00 2 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 2 2 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.17 239 89 S 1396 Bacillus cereus 0.05 65 65 S1 1454382 Bacillus cereus D17 0.04 61 61 S1 1003239 Bacillus cereus C1L 0.01 16 16 S1 572264 Bacillus cereus 03BB102 0.00 5 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 5 5 S2 637380 Bacillus cereus biovar anthracis str. CI 0.00 3 3 S1 288681 Bacillus cereus E33L 0.12 168 164 S 1392 Bacillus anthracis 0.00 4 4 S1 261591 Bacillus anthracis str. Vollum 0.04 58 0 G2 2750818 unclassified Bacillus cereus group 0.04 57 57 S 1892404 Bacillus sp. ABP14 0.00 1 1 S 2053832 Bacillus sp. HBCD-sjtu 0.02 24 22 S 1405 Bacillus mycoides 0.00 2 2 S1 315730 Bacillus mycoides KBAB4 0.02 23 23 S 2026191 Bacillus luti 0.01 15 15 S 2026186 Bacillus paranthracis 0.01 7 7 S 64104 Bacillus pseudomycoides 0.00 6 6 S 2817477 Bacillus paramobilis 0.00 2 2 S 155322 Bacillus toyonensis 0.00 1 1 S 1890302 Bacillus wiedmannii 0.43 582 7 G1 653685 Bacillus subtilis group 0.38 524 8 G2 1938374 Bacillus amyloliquefaciens group 0.34 470 466 S 492670 Bacillus velezensis 0.00 4 4 S1 1385727 Bacillus velezensis NAU-B3 0.03 44 43 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 2 2 S 659243 Bacillus siamensis 0.03 37 22 S 1423 Bacillus subtilis 0.01 11 11 S1 86029 Bacillus subtilis subsp. natto 0.00 4 3 S1 135461 Bacillus subtilis subsp. subtilis 0.00 1 1 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 6 0 G2 653388 Bacillus mojavensis subgroup 0.00 6 6 S 260554 Bacillus halotolerans 0.00 4 3 S 1452 Bacillus atrophaeus 0.00 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 3 3 S 483913 Bacillus inaquosorum 0.00 1 1 S 96241 Bacillus spizizenii 0.03 41 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.01 10 10 S 2874284 Bacillus sp. CRB-7 0.01 9 9 S 1806216 Bacillus sp. RZ2MS9 0.01 8 8 S 2925318 Bacillus sp. N5-665 0.00 6 6 S 2841656 Bacillus sp. ZHX3 0.00 5 5 S 467262 Bacillus sp. T3 0.00 1 1 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2789208 Bacillus sp. N447-1 0.00 1 1 S 3129297 Bacillus sp. FJAT-52991 0.01 17 0 G1 1792192 Bacillus altitudinis complex 0.01 17 17 S 293387 Bacillus altitudinis 0.00 3 3 S 561879 Bacillus safensis 0.00 3 3 S 1408 Bacillus pumilus 0.40 550 0 G 84406 Virgibacillus 0.40 549 549 S 447199 Virgibacillus salarius 0.00 1 0 G1 2620237 unclassified Virgibacillus 0.00 1 1 S 2419841 Virgibacillus sp. Bac330 0.02 30 2 G 400634 Lysinibacillus 0.01 18 0 G1 2636778 unclassified Lysinibacillus 0.01 17 17 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 1 1 S 2792480 Lysinibacillus sp. JNUCC-52 0.00 5 5 S 2590012 Lysinibacillus agricola 0.00 3 3 S 28031 Lysinibacillus fusiformis 0.00 1 0 S 1421 Lysinibacillus sphaericus 0.00 1 1 S1 444177 Lysinibacillus sphaericus C3-41 0.00 1 1 S 2086577 Lysinibacillus timonensis 0.01 19 0 G 2800373 Priestia 0.01 19 17 S 1404 Priestia megaterium 0.00 2 2 S1 1006007 Priestia megaterium WSH-002 0.01 11 0 G 45667 Halobacillus 0.01 7 7 S 45668 Halobacillus litoralis 0.00 3 3 S 2932257 Halobacillus salinarum 0.00 1 1 S 2932258 Halobacillus shinanisalinarum 0.01 9 0 G 175304 Lentibacillus 0.01 8 8 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.01 9 1 G 2675229 Peribacillus 0.01 8 8 S 264697 Peribacillus muralis 0.01 8 0 G 1433999 Domibacillus 0.01 8 0 G1 2632383 unclassified Domibacillus 0.01 8 8 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.01 8 4 G 2837504 Heyndrickxia 0.00 4 4 S 1398 Heyndrickxia coagulans 0.00 6 1 G 182709 Oceanobacillus 0.00 5 0 G1 2630292 unclassified Oceanobacillus 0.00 5 5 S 2921503 Oceanobacillus sp. FSL K6-3682 0.00 4 0 G 2785518 Radiobacillus 0.00 4 4 S 2594883 Radiobacillus deserti 0.00 4 0 G 2675233 Metabacillus 0.00 4 0 G1 2675274 unclassified Metabacillus 0.00 4 4 S 2897333 Metabacillus sp. B2-18 0.00 4 0 G 129337 Geobacillus 0.00 2 2 S 1921421 Geobacillus genomosp. 3 0.00 1 1 S 860353 Geobacillus proteiniphilus 0.00 1 0 G1 1505648 Geobacillus thermoleovorans group 0.00 1 1 S 33941 Geobacillus thermoleovorans 0.00 3 0 G 2675232 Neobacillus 0.00 3 0 G1 2675272 unclassified Neobacillus 0.00 2 2 S 3070676 Neobacillus sp. PS2-9 0.00 1 1 S 3070682 Neobacillus sp. OS1-32 0.00 3 0 G 2685905 Salicibibacter 0.00 3 3 S 2743001 Salicibibacter cibi 0.00 3 0 G 2837508 Rossellomorea 0.00 2 2 S 189381 Rossellomorea marisflavi 0.00 1 1 S 218284 Rossellomorea vietnamensis 0.00 2 0 G 2837485 Evansella 0.00 2 0 S 1413 Evansella cellulosilytica 0.00 2 2 S1 649639 Evansella cellulosilytica DSM 2522 0.00 2 0 G 2005375 Alkalicoccus 0.00 2 2 S 1667239 Alkalicoccus halolimnae 0.00 2 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 2 0 S 86665 Halalkalibacterium halodurans 0.00 2 2 S1 272558 Halalkalibacterium halodurans C-125 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 G1 2639704 unclassified Anoxybacillus 0.00 1 1 G 2893057 Shouchella 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 1.78 2443 3 F 90964 Staphylococcaceae 1.75 2401 309 G 1279 Staphylococcus 1.24 1698 1669 S 1280 Staphylococcus aureus 0.02 25 25 S1 1229492 Staphylococcus aureus 08BA02176 0.00 2 2 S1 273036 Staphylococcus aureus RF122 0.00 1 1 S1 985006 Staphylococcus aureus subsp. aureus LGA251 0.00 1 1 S1 548473 Staphylococcus aureus subsp. aureus TCH60 0.06 87 87 S 70255 Staphylococcus condimenti 0.05 70 59 S 1282 Staphylococcus epidermidis 0.01 11 11 S1 176280 Staphylococcus epidermidis ATCC 12228 0.05 69 66 S 29388 Staphylococcus capitis 0.00 3 3 S1 74703 Staphylococcus capitis subsp. urealyticus 0.04 54 54 S 1283 Staphylococcus haemolyticus 0.02 32 32 S 28035 Staphylococcus lugdunensis 0.01 20 20 S 1286 Staphylococcus simulans 0.01 16 16 S 1290 Staphylococcus hominis 0.01 16 0 G1 2815305 Staphylococcus intermedius group 0.01 15 15 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 53344 Staphylococcus delphini 0.01 8 8 S 2044912 Staphylococcus debuckii 0.00 6 6 S 29378 Staphylococcus arlettae 0.00 5 5 S 985002 Staphylococcus argenteus 0.00 3 3 S 29382 Staphylococcus cohnii 0.00 2 2 S 170573 Staphylococcus pettenkoferi 0.00 2 2 S 46126 Staphylococcus chromogenes 0.00 1 1 S 214473 Staphylococcus nepalensis 0.00 1 1 S 246432 Staphylococcus equorum 0.00 1 1 S 45972 Staphylococcus pasteuri 0.00 1 1 S 29380 Staphylococcus caprae 0.02 21 21 G 2803850 Mammaliicoccus 0.01 13 0 G 489909 Nosocomiicoccus 0.01 13 13 S 1232430 Nosocomiicoccus massiliensis 0.00 4 0 G 227979 Jeotgalicoccus 0.00 4 0 G1 2630462 unclassified Jeotgalicoccus 0.00 4 4 S 946435 Jeotgalicoccus sp. ATCC 8456 0.00 1 0 G 3076173 Macrococcoides 0.00 1 1 S 69966 Macrococcoides caseolyticum 0.10 131 0 F 539738 Gemellaceae 0.10 131 74 G 1378 Gemella 0.02 30 30 S 29391 Gemella morbillorum 0.01 19 13 G1 2624949 unclassified Gemella 0.00 6 6 S 2840371 Gemella sp. zg-570 0.01 8 8 S 84135 Gemella sanguinis 0.06 77 3 F 186822 Paenibacillaceae 0.05 64 2 G 44249 Paenibacillus 0.02 21 0 G1 185978 unclassified Paenibacillus 0.01 10 10 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 5 5 S 715179 Paenibacillus sp. sptzw28 0.00 4 4 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 2921679 Paenibacillus sp. FSL R7-0272 0.01 19 19 S 79263 Paenibacillus chitinolyticus 0.01 13 10 S 1406 Paenibacillus polymyxa 0.00 2 2 S1 886882 Paenibacillus polymyxa SC2 0.00 1 1 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 4 4 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 1333845 Paenibacillus sophorae 0.00 1 1 S 2909671 Paenibacillus spongiae 0.00 1 1 S 1451 Paenibacillus amylolyticus 0.00 1 1 S 2509456 Paenibacillus protaetiae 0.00 1 1 S 253703 Paenibacillus antarcticus 0.01 7 0 F1 85151 Aneurinibacillus group 0.01 7 6 G 55079 Aneurinibacillus 0.00 1 1 S 1500254 Aneurinibacillus soli 0.00 3 2 G 329857 Cohnella 0.00 1 1 S 2507935 Cohnella abietis 0.04 60 10 F 186818 Planococcaceae 0.02 34 34 G 1372 Planococcus 0.00 6 6 G 1569 Sporosarcina 0.00 5 0 G 651660 Paenisporosarcina 0.00 5 5 S 2320858 Paenisporosarcina cavernae 0.00 3 0 G 160795 Ureibacillus 0.00 3 3 S 367743 Ureibacillus thermophilus 0.00 1 0 G 648800 Solibacillus 0.00 1 0 S 76853 Solibacillus silvestris 0.00 1 1 S1 1002809 Solibacillus silvestris StLB046 0.00 1 0 G 889388 Chryseomicrobium 0.00 1 0 G1 2625558 unclassified Chryseomicrobium 0.00 1 1 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.03 47 0 F 186820 Listeriaceae 0.03 44 3 G 1637 Listeria 0.02 29 0 S 1638 Listeria ivanovii 0.02 29 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.02 29 29 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 5 0 G1 2642072 unclassified Listeria 0.00 5 5 S 1844999 Listeria sp. PSOL-1 0.00 4 4 S 1639 Listeria monocytogenes 0.00 3 3 S 1006155 Listeria weihenstephanensis 0.00 3 0 G 2755 Brochothrix 0.00 3 3 S 2756 Brochothrix thermosphacta 0.01 17 0 O1 539002 Bacillales incertae sedis 0.01 17 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.01 17 16 G 33986 Exiguobacterium 0.00 1 1 S 41170 Exiguobacterium acetylicum 0.01 8 0 F 186823 Alicyclobacillaceae 0.01 8 2 G 29330 Alicyclobacillus 0.00 6 6 S 2931921 Alicyclobacillus mengziensis 0.00 5 2 F 186824 Thermoactinomycetaceae 0.00 3 0 G 292635 Laceyella 0.00 3 3 S 37482 Laceyella sacchari 0.00 3 0 F 186821 Sporolactobacillaceae 0.00 3 3 G 2077 Sporolactobacillus 0.00 2 0 F 3076164 Abyssicoccaceae 0.00 2 0 G 1955413 Abyssicoccus 0.00 2 2 S 1817405 Abyssicoccus albus 1.45 1990 55 C 186801 Clostridia 0.65 892 0 O 3085636 Lachnospirales 0.65 884 34 F 186803 Lachnospiraceae 0.16 214 47 G 841 Roseburia 0.12 160 160 S 301301 Roseburia hominis 0.01 7 0 G1 2637578 unclassified Roseburia 0.01 7 7 S 1261635 Roseburia sp. 831b 0.08 116 43 G 1164882 Lachnoanaerobaculum 0.04 49 49 S 2490855 Lachnoanaerobaculum gingivalis 0.02 24 24 S 617123 Lachnoanaerobaculum umeaense 0.06 80 56 G 572511 Blautia 0.01 10 0 S 40520 Blautia obeum 0.01 7 7 S1 411459 Blautia obeum ATCC 29174 0.00 3 3 S1 657314 Blautia obeum A2-162 0.00 5 0 S 53443 Blautia hydrogenotrophica 0.00 5 5 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 5 0 G1 2648079 unclassified Blautia 0.00 5 5 S 2479767 Blautia sp. SC05B48 0.00 2 2 S 89014 Blautia luti 0.00 2 2 S 1912897 Blautia argi 0.05 74 0 G 830 Butyrivibrio 0.05 74 74 S 831 Butyrivibrio fibrisolvens 0.05 72 0 G 1506553 Lachnoclostridium 0.05 72 0 S 66219 Lachnoclostridium phytofermentans 0.05 72 72 S1 357809 Lachnoclostridium phytofermentans ISDg 0.05 66 12 G 33042 Coprococcus 0.03 41 0 G1 2684943 unclassified Coprococcus 0.03 41 41 S 751585 Coprococcus sp. ART55/1 0.01 13 13 S 116085 Coprococcus catus 0.04 52 0 G 1766253 Agathobacter 0.04 52 52 S 39491 Agathobacter rectalis 0.02 33 0 G 28050 Lachnospira 0.02 33 33 S 39485 Lachnospira eligens 0.02 30 0 G 2163168 Kineothrix 0.02 30 0 G1 2625420 unclassified Kineothrix 0.02 30 30 S 3070215 Kineothrix sp. MB12-C1 0.02 23 0 G 189330 Dorea 0.01 17 17 S 88431 Dorea longicatena 0.00 6 6 S 39486 Dorea formicigenerans 0.02 21 0 G 248744 Marvinbryantia 0.02 21 0 S 168384 Marvinbryantia formatexigens 0.02 21 21 S1 478749 Marvinbryantia formatexigens DSM 14469 0.01 12 0 G 2383 Candidatus Epulonipiscium 0.01 12 12 S 420336 Candidatus Epulonipiscium viviparus 0.01 12 0 G 1213720 Stomatobaculum 0.01 12 0 G1 2643635 unclassified Stomatobaculum 0.01 12 12 S 3059030 Stomatobaculum sp. F0698 0.01 12 0 G 3024823 Anaeromicropila 0.01 12 12 S 2785025 Anaeromicropila herbilytica 0.01 9 0 G 3031933 Chordicoccus 0.01 9 9 S 2709410 Chordicoccus furentiruminis 0.01 7 0 G 2944193 Simiaoa 0.01 7 7 S 2763672 Simiaoa sunii 0.00 5 4 G 207244 Anaerostipes 0.00 1 1 S 649756 Anaerostipes hadrus 0.00 5 0 G 2316020 Mediterraneibacter 0.00 5 5 S 33038 Mediterraneibacter gnavus 0.00 2 0 G 2719231 Lacrimispora 0.00 2 2 S 384636 Lacrimispora xylanisolvens 0.00 1 0 G 2944195 Qiania 0.00 1 1 S 2763669 Qiania dongpingensis 0.00 1 0 G 2569097 Anaerobutyricum 0.00 1 1 S 39488 Anaerobutyricum hallii 0.00 1 1 G 1843210 Anaerocolumna 0.00 1 0 G 1506577 Tyzzerella 0.00 1 1 S 36835 [Clostridium] colinum 0.00 1 0 G 46205 Pseudobutyrivibrio 0.00 1 1 S 185007 Pseudobutyrivibrio xylanivorans 0.00 4 0 F 3018741 Cellulosilyticaceae 0.00 4 4 G 698776 Cellulosilyticum 0.00 3 0 F 2603322 Vallitaleaceae 0.00 2 0 G 1348611 Vallitalea 0.00 2 2 S 1185412 Vallitalea guaymasensis 0.00 1 0 G 2603323 Petrocella 0.00 1 1 S 2173034 Petrocella atlantisensis 0.00 1 0 F 3118652 Anaerotignaceae 0.00 1 0 G 2039240 Anaerotignum 0.00 1 0 S 28446 Anaerotignum propionicum 0.00 1 1 S1 991789 Anaerotignum propionicum DSM 1682 0.54 744 29 O 186802 Eubacteriales 0.37 513 4 F 216572 Oscillospiraceae 0.18 240 162 G 216851 Faecalibacterium 0.05 72 72 S 853 Faecalibacterium prausnitzii 0.00 5 5 S 3030638 Faecalibacterium taiwanense 0.00 1 1 S 411483 Faecalibacterium duncaniae 0.08 114 9 G 292632 Subdoligranulum 0.08 104 104 S 214851 Subdoligranulum variabile 0.00 1 0 G1 512297 environmental samples 0.00 1 1 S 512298 uncultured Subdoligranulum sp. 0.06 86 3 G 1263 Ruminococcus 0.05 74 74 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.00 6 6 S 2564099 Ruminococcus bovis 0.00 2 2 S 438033 Ruminococcus gauvreauii 0.00 1 0 S 1264 Ruminococcus albus 0.00 1 1 S1 697329 Ruminococcus albus 7 = DSM 20455 0.02 24 0 G 2842531 Solibaculum 0.02 24 24 S 2780922 Solibaculum mannosilyticum 0.02 21 20 G 2892396 Vescimonas 0.00 1 1 S 2714355 Vescimonas coprocola 0.01 13 0 G 236752 Fastidiosipila 0.01 13 13 S 236753 Fastidiosipila sanguinis 0.00 4 0 G 459786 Oscillibacter 0.00 4 4 S 2763056 Oscillibacter hominis 0.00 3 0 G 946234 Flavonifractor 0.00 3 3 S 292800 Flavonifractor plautii 0.00 3 0 G 2038676 Paludihabitans 0.00 3 0 G1 2644543 unclassified Paludihabitans 0.00 3 3 S 3070656 Paludicola sp. MB14-C6 0.00 1 0 G 2304687 Petroclostridium 0.00 1 0 G1 2619260 unclassified Petroclostridium 0.00 1 1 S 3045146 Petroclostridium sp. X23 0.06 76 0 O1 538999 Eubacteriales incertae sedis 0.05 65 5 G 1686313 Fenollaria 0.04 60 60 S 938288 Fenollaria massiliensis 0.00 4 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 4 0 G 2886866 Sinanaerobacter 0.00 4 0 G1 2886867 unclassified Sinanaerobacter 0.00 4 4 S 3111540 Sinanaerobacter sp. ZZT-01 0.00 2 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 2 2 G 73918 Thermaerobacter 0.00 2 0 G 1392389 Intestinimonas 0.00 2 2 S 1297617 Intestinimonas butyriciproducens 0.00 2 0 G 2717089 Massilistercora 0.00 2 2 S 2086584 Massilistercora timonensis 0.00 1 0 G 1918454 Flintibacter 0.00 1 0 G1 2610894 unclassified Flintibacter 0.00 1 1 S 2610895 Flintibacter sp. KGMB00164 0.04 56 45 F 31984 Heliobacteriaceae 0.01 11 0 G 79598 Heliorestis 0.01 11 11 S 356322 Heliorestis convoluta 0.04 48 1 F 31979 Clostridiaceae 0.03 47 6 G 1485 Clostridium 0.01 15 12 S 1502 Clostridium perfringens 0.00 3 3 S1 451752 Clostridium perfringens E 0.00 6 3 S 1491 Clostridium botulinum 0.00 3 3 S1 1408283 Clostridium botulinum CDC_1436 0.00 5 0 G1 2614128 unclassified Clostridium 0.00 3 3 S 3070996 Clostridium sp. MB40-C1 0.00 2 2 S 3070681 Clostridium sp. OS1-26 0.00 4 4 S 94869 Clostridium gasigenes 0.00 2 2 S 84023 Clostridium autoethanogenum 0.00 2 2 S 1716543 Clostridium thermarum 0.00 2 2 S 1520 Clostridium beijerinckii 0.00 1 1 S 2320868 Clostridium manihotivorum 0.00 1 0 S 1501 Clostridium pasteurianum 0.00 1 1 S1 86416 Clostridium pasteurianum BC1 0.00 1 1 S 1492 Clostridium butyricum 0.00 1 0 S 1493 Clostridium cellulovorans 0.00 1 1 S1 573061 Clostridium cellulovorans 743B 0.00 1 1 S 1529 Clostridium cadaveris 0.01 10 0 F 186806 Eubacteriaceae 0.01 10 0 G 1730 Eubacterium 0.01 8 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.01 8 8 S 2841528 Eubacterium sp. MSJ-33 0.00 2 2 S 1736 Eubacterium limosum 0.00 3 0 F 3046368 Aristaeellaceae 0.00 3 3 G 3046369 Aristaeella 0.00 2 1 F 3085642 Butyricicoccaceae 0.00 1 0 G 2048137 Agathobaculum 0.00 1 0 G1 2620324 unclassified Agathobaculum 0.00 1 1 S 3079302 Agathobaculum sp. NTUH-O15-33 0.00 2 0 F 3047432 Maliibacteriaceae 0.00 2 0 G 3047433 Maliibacterium 0.00 2 2 S 2086585 Maliibacterium massiliense 0.00 2 0 F 1491775 Proteinivoraceae 0.00 1 1 G 1491776 Proteinivorax 0.00 1 0 G 2838170 Alkalicella 0.00 1 1 S 2731377 Alkalicella caledoniensis 0.00 2 0 F 186807 Peptococcaceae 0.00 1 1 G 2916693 Desulforamulus 0.00 1 0 G 2924872 Acididesulfobacillus 0.00 1 1 S 1561005 Acididesulfobacillus acetoxydans 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 1 G 56112 Dehalobacter 0.12 171 0 O 53433 Halanaerobiales 0.12 168 0 F 53434 Halobacteroidaceae 0.12 168 0 G 42417 Halobacteroides 0.12 168 0 S 42422 Halobacteroides halobius 0.12 168 168 S1 748449 Halobacteroides halobius DSM 5150 0.00 2 0 O1 387655 Halanaerobiales incertae sedis 0.00 2 0 G 1769008 Anoxybacter 0.00 2 2 S 1323375 Anoxybacter fermentans 0.00 1 0 F 972 Halanaerobiaceae 0.00 1 1 G 2330 Halanaerobium 0.09 123 1 O 3082720 Peptostreptococcales 0.08 109 8 F 186804 Peptostreptococcaceae 0.04 54 0 G 1505657 Intestinibacter 0.04 54 54 S 261299 Intestinibacter bartlettii 0.02 24 0 G 1257 Peptostreptococcus 0.02 24 24 S 3003601 Peptostreptococcus equinus 0.01 15 0 G 1501226 Romboutsia 0.01 13 13 S 1507512 Romboutsia hominis 0.00 2 0 G1 2626894 unclassified Romboutsia 0.00 2 2 S 2708053 Romboutsia sp. 13368 0.00 4 0 G 1870884 Clostridioides 0.00 4 3 S 1496 Clostridioides difficile 0.00 1 1 S1 645462 Clostridioides difficile CD196 0.00 3 2 G 1505652 Terrisporobacter 0.00 1 1 S 2813371 Terrisporobacter hibernicus 0.00 1 0 G 214904 Tepidibacter 0.00 1 1 S 3036126 Tepidibacter hydrothermalis 0.01 11 2 F 3030910 Anaerovoracaceae 0.01 8 8 G 86331 Mogibacterium 0.00 1 0 G 1926556 Emergencia 0.00 1 0 G1 2642996 unclassified Emergencia 0.00 1 1 S 3114296 Emergencia sp. JLR.KK010 0.00 1 0 F 3118657 Thermotaleaceae 0.00 1 0 G 390805 Geosporobacter 0.00 1 1 S 1424294 Geosporobacter ferrireducens 0.00 1 0 F 3120161 Peptoclostridiaceae 0.00 1 0 G 1481960 Peptoclostridium 0.00 1 0 S 1731 Peptoclostridium acidaminophilum 0.00 1 1 S1 1286171 Peptoclostridium acidaminophilum DSM 3953 0.00 2 0 O 68295 Thermoanaerobacterales 0.00 2 0 F 186814 Thermoanaerobacteraceae 0.00 2 0 G 140458 Thermacetogenium 0.00 2 0 S 85874 Thermacetogenium phaeum 0.00 2 2 S1 1089553 Thermacetogenium phaeum DSM 12270 0.00 1 0 C1 189325 Clostridia incertae sedis 0.00 1 0 G 3136917 Helicovermis 0.00 1 1 S 3065157 Helicovermis profundi 0.00 1 0 O 485256 Natranaerobiales 0.00 1 0 F 485255 Natranaerobiaceae 0.00 1 0 G 375928 Natranaerobius 0.00 1 0 S 375929 Natranaerobius thermophilus 0.00 1 1 S1 457570 Natranaerobius thermophilus JW/NM-WN-LF 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039168 Moorellaceae 0.00 1 0 G 44260 Moorella 0.00 1 1 S 676965 Moorella humiferrea 1.15 1572 1 C 909932 Negativicutes 1.01 1383 0 O 1843489 Veillonellales 1.01 1383 1 F 31977 Veillonellaceae 0.57 785 451 G 29465 Veillonella 0.12 165 165 S 423477 Veillonella rogosae 0.06 84 84 S 39777 Veillonella atypica 0.05 70 70 S 29466 Veillonella parvula 0.01 15 15 S 248315 Veillonella rodentium 0.33 449 56 G 906 Megasphaera 0.24 330 324 S 907 Megasphaera elsdenii 0.00 6 6 S1 1064535 Megasphaera elsdenii DSM 20460 0.03 41 41 S 2144175 Megasphaera stantonii 0.02 22 22 S 1675036 Megasphaera hexanoica 0.11 148 7 G 39948 Dialister 0.10 140 140 S 487173 Dialister succinatiphilus 0.00 1 1 S 39950 Dialister pneumosintes 0.08 110 0 O 1843488 Acidaminococcales 0.08 110 2 F 909930 Acidaminococcaceae 0.08 108 8 G 904 Acidaminococcus 0.07 100 0 S 905 Acidaminococcus fermentans 0.07 100 100 S1 591001 Acidaminococcus fermentans DSM 20731 0.06 78 0 O 909929 Selenomonadales 0.04 55 2 F 1843490 Sporomusaceae 0.04 53 3 G 2375 Sporomusa 0.04 50 0 S 2378 Sporomusa ovata 0.04 50 50 S1 1123288 Sporomusa ovata DSM 2662 0.02 23 0 F 1843491 Selenomonadaceae 0.01 16 12 G 970 Selenomonas 0.00 3 0 S 971 Selenomonas ruminantium 0.00 3 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.00 3 3 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.00 1 1 S 69823 Selenomonas sputigena 0.00 4 0 G 158846 Megamonas 0.00 4 4 S 158847 Megamonas hypermegale 0.00 3 0 G 864 Pectinatus 0.00 3 3 S 865 Pectinatus frisingensis 0.58 800 1 C 1737404 Tissierellia 0.53 719 3 O 1737405 Tissierellales 0.52 715 3 F 1570339 Peptoniphilaceae 0.18 249 41 G 165779 Anaerococcus 0.06 77 0 S 33034 Anaerococcus prevotii 0.06 77 77 S1 525919 Anaerococcus prevotii DSM 20548 0.05 66 0 G1 2614126 unclassified Anaerococcus 0.05 66 66 S 3036300 Anaerococcus sp. Marseille-Q7828 0.04 51 51 S 1755241 Anaerococcus nagyae 0.01 14 14 S 1870984 Anaerococcus mediterraneensis 0.18 248 0 G 150022 Finegoldia 0.18 248 247 S 1260 Finegoldia magna 0.00 1 1 S1 334413 Finegoldia magna ATCC 29328 0.14 195 9 G 162289 Peptoniphilus 0.08 106 106 S 3036303 Peptoniphilus genitalis 0.06 79 79 S 54005 Peptoniphilus harei 0.00 1 1 S 54006 Peptoniphilus ivorii 0.01 19 0 G 543311 Parvimonas 0.01 19 19 S 33033 Parvimonas micra 0.00 1 0 G 1161127 Murdochiella 0.00 1 1 S 1852373 Murdochiella vaginalis 0.00 1 0 F 2992717 Acidilutibacteraceae 0.00 1 0 G 2992720 Acidilutibacter 0.00 1 1 S 2507161 Acidilutibacter cellobiosedens 0.06 80 0 C1 1737407 Tissierellia incertae sedis 0.06 80 0 G 1582879 Ezakiella 0.06 80 80 S 46507 Ezakiella coagulans 0.07 100 0 C 526524 Erysipelotrichia 0.07 100 2 O 526525 Erysipelotrichales 0.05 70 0 F 2810280 Coprobacillaceae 0.05 70 4 G 135858 Catenibacterium 0.04 58 0 G1 2643636 unclassified Catenibacterium 0.04 58 58 S 2478954 Catenibacterium sp. co_0103 0.01 8 8 S 100886 Catenibacterium mitsuokai 0.02 24 1 F 128827 Erysipelotrichaceae 0.01 18 0 G 123375 Solobacterium 0.01 18 18 S 102148 Solobacterium moorei 0.00 2 0 G 1647 Erysipelothrix 0.00 1 1 S 1514105 Erysipelothrix larvae 0.00 1 1 S 2485784 Erysipelothrix piscisicarius 0.00 1 0 G 174708 Allobaculum 0.00 1 0 G1 2623473 unclassified Allobaculum 0.00 1 1 S 2853432 Allobaculum sp. Allo2 0.00 1 0 G 2679910 Intestinibaculum 0.00 1 1 S 2487118 Intestinibaculum porci 0.00 1 0 G 3059504 Allocoprobacillus 0.00 1 1 S 2944914 Allocoprobacillus halotolerans 0.00 4 0 F 2810281 Turicibacteraceae 0.00 4 4 G 191303 Turicibacter 0.00 1 0 C 1676648 Limnochordia 0.00 1 0 O 1676649 Limnochordales 0.00 1 0 F 1676650 Limnochordaceae 0.00 1 1 G 1676651 Limnochorda 0.00 1 0 P1 2840488 Bacillota incertae sedis 0.00 1 0 O 3071001 Caldicellulosiruptorales 0.00 1 0 F 3071002 Caldicellulosiruptoraceae 0.00 1 0 G 44000 Caldicellulosiruptor 0.00 1 1 S 29324 Caldicellulosiruptor naganoensis 0.00 1 0 C 3086086 Dethiobacteria 0.00 1 0 O 3086087 Dethiobacterales 0.00 1 0 F 3086088 Dethiobacteraceae 0.00 1 0 G 338648 Candidatus Contubernalis 0.00 1 1 S 338645 Candidatus Contubernalis alkalaceticus 10.88 14892 8 P 201174 Actinomycetota 10.43 14278 113 C 1760 Actinomycetes 6.09 8334 26 O 85009 Propionibacteriales 6.04 8266 295 F 31957 Propionibacteriaceae 5.65 7734 91 G 1912216 Cutibacterium 5.16 7064 7026 S 1747 Cutibacterium acnes 0.03 35 10 S1 1734925 Cutibacterium acnes subsp. acnes 0.02 25 25 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.00 3 3 S1 1122995 Cutibacterium acnes DSM 1897 0.32 437 437 S 33011 Cutibacterium granulosum 0.10 135 135 S 33010 Cutibacterium avidum 0.01 7 7 S 2559073 Cutibacterium modestum 0.07 96 13 G 2801844 Arachnia 0.06 83 83 S 1750 Arachnia propionica 0.02 33 9 G 29404 Microlunatus 0.01 9 0 S 29405 Microlunatus phosphovorus 0.01 9 9 S1 1032480 Microlunatus phosphovorus NM-1 0.01 9 9 S 630515 Microlunatus soli 0.00 6 0 G1 2619695 unclassified Microlunatus 0.00 6 6 S 2672569 Microlunatus sp. Gsoil 973 0.02 32 4 G 72763 Tessaracoccus 0.02 27 27 S 1285901 Tessaracoccus defluvii 0.00 1 1 S 2161816 Tessaracoccus timonensis 0.02 31 0 G 1912215 Acidipropionibacterium 0.02 30 30 S 1749 Acidipropionibacterium jensenii 0.00 1 1 S 2057246 Acidipropionibacterium virtanenii 0.01 19 2 G 1911549 Raineyella 0.01 13 13 G1 2662260 unclassified Raineyella 0.00 4 4 S 2662261 Raineyella fluvialis 0.01 9 0 G 1085622 Propioniciclava 0.01 9 0 G1 2642922 unclassified Propioniciclava 0.01 9 9 S 2760308 Propioniciclava sp. MC1595 0.01 7 0 G 1743 Propionibacterium 0.00 5 5 S 1744 Propionibacterium freudenreichii 0.00 1 1 S 119981 Propionibacterium australiense 0.00 1 1 S 556499 Propionibacterium acidifaciens 0.00 6 0 G 369926 Brooklawnia 0.00 6 6 S 3041175 Brooklawnia propionicigenes 0.00 2 0 G 2919589 Vaginimicrobium 0.00 2 2 S 1871034 Vaginimicrobium propionicum 0.00 1 0 G 203133 Propionimicrobium 0.00 1 0 G1 2633994 unclassified Propionimicrobium 0.00 1 1 S 3052086 Propionimicrobium sp. PCR01-08-3 0.00 1 0 G 1278221 Auraticoccus 0.00 1 1 S 675864 Auraticoccus monumenti 0.03 40 14 F 85015 Nocardioidaceae 0.01 18 8 G 1839 Nocardioides 0.00 4 4 S 3095075 Nocardioides renjunii 0.00 3 0 G1 2615069 unclassified Nocardioides 0.00 2 2 S 2763008 Nocardioides sp. zg-1228 0.00 1 1 S 2662361 Nocardioides sp. dk884 0.00 1 1 S 3095076 Nocardioides bizhenqiangii 0.00 1 1 S 160826 Nocardioides aquaticus 0.00 1 1 S 1804624 Nocardioides baekrokdamisoli 0.01 7 0 G 3024237 Solicola 0.01 7 7 S 2908642 Solicola gregarius 0.00 1 1 G 2040 Aeromicrobium 0.00 2 0 F 2726069 Kribbellaceae 0.00 2 0 G 182639 Kribbella 0.00 2 0 G1 2644121 unclassified Kribbella 0.00 2 2 S 2975966 Kribbella sp. NBC_00359 1.90 2599 10 O 85007 Mycobacteriales 1.80 2468 0 F 1653 Corynebacteriaceae 1.80 2468 1477 G 1716 Corynebacterium 0.17 236 236 S 38289 Corynebacterium jeikeium 0.08 105 105 S 43768 Corynebacterium matruchotii 0.05 70 70 S 38284 Corynebacterium accolens 0.04 52 52 S 161895 Corynebacterium phocae 0.04 49 49 S 61592 Corynebacterium durum 0.03 37 37 S 1414719 Corynebacterium jeddahense 0.03 36 36 S 53374 Corynebacterium coyleae 0.02 33 33 S 1719 Corynebacterium pseudotuberculosis 0.02 31 31 S 187491 Corynebacterium glaucum 0.02 31 31 S 1737425 Corynebacterium provencense 0.02 30 30 S 1758466 Corynebacterium faecale 0.02 24 24 S 679663 Corynebacterium canis 0.02 23 23 S 35757 Corynebacterium cystitidis 0.02 21 21 S 2080740 Corynebacterium yudongzhengii 0.01 20 20 S 43765 Corynebacterium amycolatum 0.01 19 2 S 1718 Corynebacterium glutamicum 0.01 17 17 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.01 17 0 G1 2624378 unclassified Corynebacterium 0.01 11 11 S 1487956 Corynebacterium sp. ATCC 6931 0.00 5 5 S 2599641 Corynebacterium sp. sy039 0.00 1 1 S 3062461 Corynebacterium sp. BD556 0.01 17 17 S 2055947 Corynebacterium heidelbergense 0.01 15 15 S 43771 Corynebacterium urealyticum 0.01 15 15 S 108486 Corynebacterium falsenii 0.01 14 0 S 441501 Corynebacterium massiliense 0.01 14 14 S1 1121364 Corynebacterium massiliense DSM 45435 0.01 10 10 S 169292 Corynebacterium aurimucosum 0.01 9 0 S 89154 Corynebacterium terpenotabidum 0.01 9 9 S1 1200352 Corynebacterium terpenotabidum Y-11 0.01 9 9 S 1072256 Corynebacterium uterequi 0.01 9 0 S 575200 Corynebacterium maris 0.01 9 9 S1 1224163 Corynebacterium maris DSM 45190 0.01 9 9 S 3049799 Corynebacterium breve 0.01 7 7 S 2709394 Corynebacterium lizhenjunii 0.00 6 0 S 38288 Corynebacterium genitalium 0.00 6 6 S1 585529 Corynebacterium genitalium ATCC 33030 0.00 6 6 S 2709392 Corynebacterium qintianiae 0.00 4 4 S 65058 Corynebacterium ulcerans 0.00 4 4 S 39791 Corynebacterium glucuronolyticum 0.00 4 4 S 571915 Corynebacterium mustelae 0.00 3 3 S 131318 Corynebacterium felinum 0.00 3 3 S 1717 Corynebacterium diphtheriae 0.00 2 2 S 1862358 Corynebacterium choanae 0.00 2 0 S 234828 Corynebacterium caspium 0.00 2 2 S1 1121355 Corynebacterium caspium DSM 44850 0.00 2 2 S 2768834 Corynebacterium zhongnanshanii 0.00 2 2 S 1705 Corynebacterium stationis 0.00 1 1 S 1190508 Corynebacterium aquatimens 0.00 1 1 S 1783348 Corynebacterium guangdongense 0.00 1 1 S 2675219 Corynebacterium occultum 0.00 1 1 S 2883169 Corynebacterium uberis 0.00 1 0 S 258224 Corynebacterium resistens 0.00 1 1 S1 662755 Corynebacterium resistens DSM 45100 0.03 39 0 F 85025 Nocardiaceae 0.02 23 13 G 1827 Rhodococcus 0.00 6 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 2 2 S 1805827 Rhodococcus sp. MTM3W5.2 0.00 1 1 S 2742603 Rhodococcus sp. W8901 0.00 1 1 S 2789739 Rhodococcus sp. USK10 0.00 1 1 S 1302308 Rhodococcus sp. P1Y 0.00 1 1 S 2885078 Rhodococcus sp. RDE2 0.00 2 0 G1 2840174 Rhodococcus erythropolis group 0.00 2 2 S 334542 Rhodococcus qingshengii 0.00 2 2 S 37919 Rhodococcus opacus 0.01 15 2 G 1817 Nocardia 0.01 9 9 S 37332 Nocardia seriolae 0.00 2 2 S 455432 Nocardia terpenica 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975993 Nocardia sp. NBC_00565 0.00 1 1 S 2055889 Nocardia tengchongensis 0.00 1 0 G 2979332 Prescottella 0.00 1 1 S 43767 Prescottella equi 0.03 36 0 F 2805586 Lawsonellaceae 0.03 36 0 G 1847725 Lawsonella 0.03 36 36 S 1528099 Lawsonella clevelandensis 0.02 29 10 F 1762 Mycobacteriaceae 0.01 9 4 G 1763 Mycobacterium 0.00 3 0 G1 77643 Mycobacterium tuberculosis complex 0.00 3 3 S 1773 Mycobacterium tuberculosis 0.00 2 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2675523 Mycobacterium sp. DL440 0.00 1 1 S 2903536 Mycobacterium sp. 20KCMC460 0.01 8 5 G 1866885 Mycolicibacterium 0.00 1 1 S 1772 Mycolicibacterium smegmatis 0.00 1 1 S 39687 Mycolicibacterium austroafricanum 0.00 1 1 S 1793 Mycolicibacterium fallax 0.00 1 0 G 1073531 Mycolicibacter 0.00 1 0 G1 2642523 unclassified Mycolicibacter 0.00 1 1 S 3064287 Mycolicibacter sp. MU0083 0.00 1 0 G 2126281 Mycolicibacillus 0.00 1 1 S 1069221 Mycolicibacillus parakoreensis 0.01 15 0 F 85028 Tsukamurellaceae 0.01 15 15 G 2060 Tsukamurella 0.00 1 0 F 85026 Gordoniaceae 0.00 1 1 G 2053 Gordonia 0.00 1 0 F 316606 Segniliparaceae 0.00 1 0 G 286801 Segniliparus 0.00 1 0 S 286802 Segniliparus rotundus 0.00 1 1 S1 640132 Segniliparus rotundus DSM 44985 1.47 2009 25 O 85006 Micrococcales 1.06 1447 113 F 1268 Micrococcaceae 0.70 962 83 G 32207 Rothia 0.37 510 510 S 2047 Rothia dentocariosa 0.14 186 186 S 172042 Rothia aeria 0.13 179 161 S 43675 Rothia mucilaginosa 0.01 18 18 S1 680646 Rothia mucilaginosa DY-18 0.00 2 2 S 169480 Rothia amarae 0.00 2 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2810516 Rothia sp. ZJ932 0.00 1 1 S 3047030 Rothia sp. SD9660Na 0.10 142 97 G 57493 Kocuria 0.03 40 40 S 71999 Kocuria palustris 0.00 3 3 S 1049583 Kocuria indica 0.00 2 2 S 72000 Kocuria rhizophila 0.09 127 125 G 1269 Micrococcus 0.00 2 2 S 1270 Micrococcus luteus 0.03 45 0 G 1868332 Neomicrococcus 0.03 45 45 S 556325 Neomicrococcus aestuarii 0.02 25 0 G 1742989 Glutamicibacter 0.01 13 13 S 37929 Glutamicibacter nicotianae 0.01 11 0 G1 2627139 unclassified Glutamicibacter 0.01 11 11 S 1155384 Glutamicibacter sp. ZJUTW 0.00 1 1 S 1933880 Glutamicibacter halophytocola 0.01 10 0 G 1742993 Pseudarthrobacter 0.01 10 0 G1 2647000 unclassified Pseudarthrobacter 0.01 9 9 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 1 S 2851598 Pseudarthrobacter sp. L1SW 0.01 9 3 G 1663 Arthrobacter 0.00 6 0 G1 235627 unclassified Arthrobacter 0.00 3 3 S 2828862 Arthrobacter sp. Helios 0.00 1 1 S 904039 Arthrobacter sp. NEB 688 0.00 1 1 S 2830998 Arthrobacter sp. NicSoilB8 0.00 1 1 S 2654190 Arthrobacter sp. JZ12 0.00 6 6 G 1160973 Auritidibacter 0.00 2 0 G 1742990 Paeniglutamicibacter 0.00 2 0 G1 2639426 unclassified Paeniglutamicibacter 0.00 2 2 S 2853258 Paeniglutamicibacter sp. Y32M11 0.00 2 0 G 1742991 Pseudoglutamicibacter 0.00 2 2 S 98671 Pseudoglutamicibacter albus 0.00 1 0 G 2078575 Psychromicrobium 0.00 1 1 S 1618207 Psychromicrobium lacuslunae 0.00 1 1 G 57494 Nesterenkonia 0.00 1 0 G 169133 Citricoccus 0.00 1 0 G1 2632435 unclassified Citricoccus 0.00 1 1 S 2567881 Citricoccus sp. SGAir0253 0.00 1 0 G 1742992 Paenarthrobacter 0.00 1 0 G1 2634190 unclassified Paenarthrobacter 0.00 1 1 S 2782567 Paenarthrobacter sp. GOM3 0.17 238 32 F 85023 Microbacteriaceae 0.09 130 120 G 33882 Microbacterium 0.00 6 0 G1 2609290 unclassified Microbacterium 0.00 2 2 S 2981139 Microbacterium sp. AB 0.00 2 2 S 1906742 Microbacterium sp. BH-3-3-3 0.00 1 1 S 2962064 Microbacterium sp. M28 0.00 1 1 S 3135260 Microbacterium sp. LWH13-1.2 0.00 1 1 S 3079935 Microbacterium limosum 0.00 1 1 S 936337 Microbacterium amylolyticum 0.00 1 1 S 273677 Microbacterium oleivorans 0.00 1 1 S 104336 Microbacterium foliorum 0.02 31 3 G 55968 Leucobacter 0.02 25 0 G1 2621730 unclassified Leucobacter 0.02 25 25 S 2813744 Leucobacter sp. CX169 0.00 3 3 S 2873270 Leucobacter tenebrionis 0.01 17 0 F1 1655488 Luna cluster 0.01 17 2 F2 1655489 Luna-1 subcluster 0.01 12 0 G 529881 Aquiluna 0.01 10 1 G1 2617988 unclassified Aquiluna 0.01 9 9 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 2 2 S 2499157 Aquiluna borgnonia 0.00 3 1 G 529883 Rhodoluna 0.00 2 2 S 529884 Rhodoluna lacicola 0.01 7 3 G 33877 Agromyces 0.00 3 3 S 1858653 Agromyces mangrovi 0.00 1 0 G1 2639701 unclassified Agromyces 0.00 1 1 S 3156399 Agromyces sp. G08B096 0.00 6 6 G 33886 Rathayibacter 0.00 4 0 G 256818 Gulosibacter 0.00 4 4 S 256821 Gulosibacter molinativorax 0.00 4 0 G 255204 Pseudoclavibacter 0.00 4 0 G1 2615177 unclassified Pseudoclavibacter 0.00 4 4 S 2866588 Pseudoclavibacter sp. Marseille-Q3772 0.00 3 0 G 1573 Clavibacter 0.00 3 3 S 31963 Clavibacter nebraskensis 0.00 1 0 G 1433997 Diaminobutyricimonas 0.00 1 0 G1 2643261 unclassified Diaminobutyricimonas 0.00 1 1 S 2683590 Diaminobutyricimonas sp. LJ205 0.00 1 0 G 447237 Frondihabitans 0.00 1 0 G1 2626248 unclassified Frondihabitans 0.00 1 1 S 1446794 Frondihabitans sp. 762G35 0.00 1 0 G 2680004 Protaetiibacter 0.00 1 1 S 2592654 Protaetiibacter larvae 0.00 1 1 G 46352 Agrococcus 0.07 97 2 F 85019 Brevibacteriaceae 0.07 93 17 G 1696 Brevibacterium 0.05 72 0 G1 2614124 unclassified Brevibacterium 0.03 45 45 S 2999062 Brevibacterium sp. BRM-1 0.02 27 27 S 2575923 Brevibacterium sp. CS2 0.00 2 2 S 273384 Brevibacterium aurantiacum 0.00 1 1 S 33889 Brevibacterium casei 0.00 1 1 S 1496080 Brevibacterium pigmentatum 0.00 2 0 G 3162691 Saxibacter 0.00 2 2 S 2909229 Saxibacter everestensis 0.05 67 0 F 2805591 Tropherymataceae 0.05 67 0 G 2038 Tropheryma 0.05 67 67 S 2039 Tropheryma whipplei 0.03 41 14 F 85021 Intrasporangiaceae 0.02 24 0 G 267408 Arsenicicoccus 0.02 24 0 G1 2663846 unclassified Arsenicicoccus 0.02 24 24 S 1658671 Arsenicicoccus sp. oral taxon 190 0.00 3 0 G 53457 Janibacter 0.00 2 2 S 53458 Janibacter limosus 0.00 1 1 S 1285192 Janibacter cremeus 0.02 32 1 F 85016 Cellulomonadaceae 0.02 30 3 G 1707 Cellulomonas 0.02 27 0 G1 2620175 unclassified Cellulomonas 0.02 27 27 S 2591145 Cellulomonas sp. Y8 0.00 1 0 G 1926259 Pseudactinotalea 0.00 1 0 G1 2649176 unclassified Pseudactinotalea 0.00 1 1 S 2654547 Pseudactinotalea sp. HY158 0.02 29 2 F 85020 Dermabacteraceae 0.01 16 4 G 36739 Dermabacter 0.01 12 12 S 1667168 Dermabacter jinjuensis 0.01 11 7 G 43668 Brachybacterium 0.00 4 0 G1 2623841 unclassified Brachybacterium 0.00 4 4 S 3023517 Brachybacterium sp. GPGPB12 0.01 13 0 F 125316 Beutenbergiaceae 0.01 13 0 G 947525 Miniimonas 0.01 13 0 G1 2626367 unclassified Miniimonas 0.01 13 13 S 2171623 Miniimonas sp. S16 0.01 10 0 F 2805590 Ornithinimicrobiaceae 0.01 7 0 G 125287 Ornithinimicrobium 0.00 3 0 G1 2615080 unclassified Ornithinimicrobium 0.00 3 3 S 2908651 Ornithinimicrobium sp. INDO-MA30-4 0.00 3 3 S 2934161 Ornithinimicrobium cryptoxanthini 0.00 1 1 S 1288636 Ornithinimicrobium flavum 0.00 3 0 G 265976 Serinicoccus 0.00 3 3 S 1078471 Serinicoccus profundi 0.00 6 0 F 145357 Dermacoccaceae 0.00 5 5 G 57495 Dermacoccus 0.00 1 0 G 2040262 Allobranchiibius 0.00 1 0 G1 2649857 unclassified Allobranchiibius 0.00 1 1 S 2904523 Allobranchiibius sp. GilTou73 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1184606 Austwickia 0.00 1 1 S 100225 Austwickia chelonae 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 0 G 154116 Georgenia 0.00 1 0 G1 2626815 unclassified Georgenia 0.00 1 1 S 2917725 Georgenia sp. TF02-10 0.00 1 0 F 1042322 Demequinaceae 0.00 1 1 G 577469 Demequina 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 1 S 2509457 Xylanimonas protaetiae 0.41 568 0 O 85004 Bifidobacteriales 0.41 568 2 F 31953 Bifidobacteriaceae 0.41 566 368 G 1678 Bifidobacterium 0.09 121 68 S 216816 Bifidobacterium longum 0.03 35 35 S1 1682 Bifidobacterium longum subsp. infantis 0.01 16 15 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S2 1300227 Bifidobacterium longum subsp. longum GT15 0.00 2 2 S1 1931217 Bifidobacterium longum subsp. suillum 0.01 18 18 S 1689 Bifidobacterium dentium 0.01 16 16 S 28026 Bifidobacterium pseudocatenulatum 0.01 11 11 S 1454229 Bifidobacterium faecale 0.01 9 1 G1 2608897 unclassified Bifidobacterium 0.01 8 8 S 2983233 Bifidobacterium sp. ESL0790 0.00 5 0 S 28025 Bifidobacterium animalis 0.00 5 0 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 5 5 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 4 2 S 1694 Bifidobacterium pseudolongum 0.00 2 2 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.00 4 4 S 77635 Bifidobacterium subtile 0.00 3 3 S 1685 Bifidobacterium breve 0.00 3 3 S 1684 Bifidobacterium asteroides 0.00 3 3 S 33905 Bifidobacterium thermophilum 0.00 1 1 S 1683 Bifidobacterium angulatum 0.26 362 0 O 2037 Actinomycetales 0.26 362 19 F 2049 Actinomycetaceae 0.15 212 121 G 2529408 Schaalia 0.06 79 79 S 1660 Schaalia odontolytica 0.00 6 6 S 131110 Schaalia radingae 0.00 2 2 S 52773 Schaalia meyeri 0.00 2 0 S 181487 Schaalia cardiffensis 0.00 2 2 S1 888050 Schaalia cardiffensis F0333 0.00 2 0 G1 2691889 unclassified Schaalia 0.00 2 2 S 2709403 Schaalia sp. ZJ405 0.08 107 80 G 1654 Actinomyces 0.01 20 13 G1 2609248 unclassified Actinomyces 0.00 6 6 S 712122 Actinomyces sp. oral taxon 414 0.00 1 1 S 1851395 Actinomyces sp. Chiba101 0.00 1 1 S 52771 Actinomyces howellii 0.00 1 1 S 52774 Actinomyces slackii 0.00 1 1 S 2744574 Actinomyces respiraculi 0.00 1 1 S 675090 Actinomyces weissii 0.00 1 1 S 1288391 Actinomyces timonensis 0.00 1 1 S 1852377 Actinomyces pacaensis 0.00 1 1 S 2560010 Actinomyces procaprae 0.01 14 14 G 2050 Mobiluncus 0.00 2 0 G 184869 Varibaculum 0.00 2 2 S 2811781 Varibaculum prostatecancerukia 0.00 2 0 G 2692113 Gleimia 0.00 1 1 S 66228 Gleimia europaea 0.00 1 1 S 595468 Gleimia hominis 0.00 2 0 G 2740557 Pauljensenia 0.00 2 2 S 178339 Pauljensenia hongkongensis 0.00 1 1 G 28263 Arcanobacterium 0.00 1 1 G 1069494 Trueperella 0.00 1 0 G 1522056 Flaviflexus 0.00 1 1 S 2496867 Flaviflexus ciconiae 0.00 1 0 G 2912996 Changpingibacter 0.00 1 1 S 2758440 Changpingibacter yushuensis 0.11 146 0 O 85011 Kitasatosporales 0.11 146 0 F 2062 Streptomycetaceae 0.10 143 14 G 1883 Streptomyces 0.05 75 3 G1 2593676 unclassified Streptomyces 0.02 27 27 S 2907545 Streptomyces sp. GQFP 0.02 21 21 S 2582831 Streptomyces sp. SUK 48 0.01 7 7 S 2903645 Streptomyces sp. NBC_00310 0.00 5 5 S 2750025 Streptomyces sp. CB00271 0.00 2 2 S 2933779 Streptomyces sp. WAC00303 0.00 2 2 S 862751 Streptomyces sp. SirexAA-E 0.00 2 2 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 3231270 Streptomyces sp. Je 1-332 0.00 1 1 S 2903881 Streptomyces sp. NBC_01476 0.00 1 1 S 2966192 Streptomyces sp. Je 1-369 0.00 1 1 S 2903659 Streptomyces sp. NBC_00503 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 2987533 Streptomyces sp. BPPL-273 0.02 21 21 S 2867410 Streptomyces profundus 0.01 12 0 G1 1477431 Streptomyces albidoflavus group 0.01 12 12 S 1886 Streptomyces albidoflavus 0.00 5 5 S 35621 Streptomyces mobaraensis 0.00 4 4 S 42234 Streptomyces acidiscabies 0.00 3 3 S 2508722 Streptomyces roseicoloratus 0.00 1 0 S 1916 Streptomyces lividans 0.00 1 1 S1 1200984 Streptomyces lividans 1326 0.00 1 0 G1 2839105 Streptomyces violaceusniger group 0.00 1 1 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 68270 Streptomyces spectabilis 0.00 1 1 S 54571 Streptomyces venezuelae 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 58343 Streptomyces canus 0.00 1 0 G1 2867164 Streptomyces rochei group 0.00 1 1 S 67376 Streptomyces vinaceusdrappus 0.00 1 1 S 1077946 Streptomyces hundungensis 0.00 1 1 S 887464 Streptomyces laculatispora 0.00 1 1 S 1690221 Streptomyces spongiicola 0.00 1 0 G 2063 Kitasatospora 0.00 1 1 S 2991545 Kitasatospora fiedleri 0.00 1 0 G 228398 Streptacidiphilus 0.00 1 0 G1 2643834 unclassified Streptacidiphilus 0.00 1 1 S 2705012 Streptacidiphilus sp. PB12-B1b 0.00 1 0 G 2995706 Streptantibioticus 0.00 1 0 S 29303 Streptantibioticus cattleyicolor 0.00 1 1 S1 1003195 Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 0.04 54 0 O 1643682 Geodermatophilales 0.04 54 48 F 85030 Geodermatophilaceae 0.00 6 0 G 1860 Geodermatophilus 0.00 5 0 S 1861 Geodermatophilus obscurus 0.00 5 5 S1 526225 Geodermatophilus obscurus DSM 43160 0.00 1 0 G1 2637632 unclassified Geodermatophilus 0.00 1 1 S 1528104 Geodermatophilus sp. DSM 44513 0.02 30 0 O 85010 Pseudonocardiales 0.02 30 0 F 2070 Pseudonocardiaceae 0.01 18 0 G 1813 Amycolatopsis 0.01 18 0 G1 2618356 unclassified Amycolatopsis 0.01 18 18 S 2745196 Amycolatopsis sp. CA-230715 0.01 7 0 G 1835 Saccharopolyspora 0.00 6 0 G1 2646250 unclassified Saccharopolyspora 0.00 6 6 S 3118084 Saccharopolyspora sp. SCSIO 74807 0.00 1 1 S 455344 Saccharopolyspora gloriosae 0.00 3 1 G 1847 Pseudonocardia 0.00 1 0 S 240495 Pseudonocardia dioxanivorans 0.00 1 1 S1 675635 Pseudonocardia dioxanivorans CB1190 0.00 1 0 G1 2619320 unclassified Pseudonocardia 0.00 1 1 S 2865833 Pseudonocardia sp. DSM 110487 0.00 1 1 G 65496 Actinoalloteichus 0.00 1 0 G 165301 Lentzea 0.00 1 0 G1 2643253 unclassified Lentzea 0.00 1 1 S 2903582 Lentzea sp. NBC_00516 0.02 26 0 O 85008 Micromonosporales 0.02 26 2 F 28056 Micromonosporaceae 0.01 16 0 G 1873 Micromonospora 0.01 14 14 S 709879 Micromonospora halotolerans 0.00 1 1 S 356851 Micromonospora chokoriensis 0.00 1 1 S 47853 Micromonospora carbonacea 0.00 4 0 G 168694 Salinispora 0.00 4 0 S 168695 Salinispora tropica 0.00 4 4 S1 369723 Salinispora tropica CNB-440 0.00 2 0 G 1865 Actinoplanes 0.00 1 1 G1 2626549 unclassified Actinoplanes 0.00 1 1 S 3040509 Actinoplanes oblitus 0.00 1 0 G 56433 Couchioplanes 0.00 1 1 S 56438 Couchioplanes caeruleus 0.00 1 1 G 390988 Actinocatenispora 0.01 15 0 O 85012 Streptosporangiales 0.01 7 0 F 2004 Streptosporangiaceae 0.00 4 0 G 147067 Thermobispora 0.00 4 4 S 2006 Thermobispora bispora 0.00 2 1 G 83681 Nonomuraea 0.00 1 1 S 2047744 Nonomuraea glycinis 0.00 1 1 G 2000 Streptosporangium 0.01 7 0 F 83676 Nocardiopsaceae 0.00 5 0 G 104204 Streptomonospora 0.00 5 5 S 2498135 Streptomonospora litoralis 0.00 2 1 G 2013 Nocardiopsis 0.00 1 1 S 163604 Nocardiopsis exhalans 0.00 1 1 F 2012 Thermomonosporaceae 0.01 8 0 O 622450 Actinopolysporales 0.01 8 0 F 622451 Actinopolysporaceae 0.01 8 0 G 1849 Actinopolyspora 0.01 8 8 S 414996 Actinopolyspora erythraea 0.01 7 0 O 85014 Glycomycetales 0.01 7 0 F 85034 Glycomycetaceae 0.01 7 0 G 2838311 Natronoglycomyces 0.01 7 7 S 2811108 Natronoglycomyces albus 0.00 5 0 O 2039638 Candidatus Nanopelagicales 0.00 5 0 F 2162846 Candidatus Nanopelagicaceae 0.00 4 0 G 2039639 Candidatus Nanopelagicus 0.00 4 4 S 1884915 Candidatus Nanopelagicus hibericus 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884913 Candidatus Planktophila lacus 0.00 1 0 O 1217098 Jiangellales 0.00 1 0 F 1217100 Jiangellaceae 0.00 1 1 G 281472 Jiangella 0.00 1 0 O 85013 Frankiales 0.00 1 0 F 74712 Frankiaceae 0.00 1 0 G 2994362 Parafrankia 0.00 1 0 G1 2994368 unclassified Parafrankia 0.00 1 1 S 298653 Parafrankia sp. EAN1pec 0.44 597 1 C 84998 Coriobacteriia 0.42 573 4 O 84999 Coriobacteriales 0.34 459 72 F 1643824 Atopobiaceae 0.16 214 0 G 1380 Atopobium 0.16 214 0 G1 2643817 unclassified Atopobium 0.16 214 214 S 712157 Atopobium sp. oral taxon 416 0.06 85 3 G 133925 Olsenella 0.06 82 0 S 133926 Olsenella uli 0.06 82 82 S1 633147 Olsenella uli DSM 7084 0.03 36 0 G 2847312 Parafannyhessea 0.03 36 36 S 604330 Parafannyhessea umbonata 0.02 32 6 G 2082587 Parolsenella 0.02 23 23 S 2003188 Parolsenella catena 0.00 3 3 S 1871022 Parolsenella massiliensis 0.01 18 3 G 2767353 Lancefieldella 0.01 9 0 S 1382 Lancefieldella parvula 0.01 9 9 S1 521095 Lancefieldella parvula DSM 20469 0.00 6 0 G1 2978947 unclassified Lancefieldella 0.00 6 6 S 3022127 Lancefieldella sp. Marseille-Q7238 0.00 2 0 G 2847307 Thermophilibacter 0.00 2 2 S 2779519 Thermophilibacter immobilis 0.08 107 1 F 84107 Coriobacteriaceae 0.07 99 4 G 102106 Collinsella 0.05 73 73 S 74426 Collinsella aerofaciens 0.02 22 0 G1 2637548 unclassified Collinsella 0.02 22 22 S 2844380 Collinsella sp. zg1085 0.01 7 0 G 1472762 Enorma 0.01 7 7 S 1871019 Enorma phocaeensis 0.00 3 0 F 3153719 Kribbibacteriaceae 0.00 3 0 G 2995122 Leptogranulimonas 0.00 3 3 S 2894156 Leptogranulimonas caecicola 0.02 23 0 O 1643822 Eggerthellales 0.02 23 1 F 1643826 Eggerthellaceae 0.01 11 0 G 1926677 Raoultibacter 0.01 11 11 S 1907662 Raoultibacter timonensis 0.00 4 4 G 644652 Gordonibacter 0.00 3 0 G 1981050 Phoenicibacter 0.00 3 3 S 1944646 Phoenicibacter congonensis 0.00 2 2 G 447020 Adlercreutzia 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.00 4 0 C 84992 Acidimicrobiia 0.00 4 0 O 84993 Acidimicrobiales 0.00 3 0 F 84994 Acidimicrobiaceae 0.00 3 0 G 53634 Acidimicrobium 0.00 3 0 S 53635 Acidimicrobium ferrooxidans 0.00 3 3 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.00 1 0 F 633392 Iamiaceae 0.00 1 0 G 3075137 Dermatobacter 0.00 1 1 S 2884263 Dermatobacter hominis 0.00 3 0 C 1497346 Thermoleophilia 0.00 3 0 O 588673 Solirubrobacterales 0.00 3 0 F 320583 Conexibacteraceae 0.00 3 0 G 191494 Conexibacter 0.00 3 0 G1 2627773 unclassified Conexibacter 0.00 3 3 S 2937800 Conexibacter sp. S30A1 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 1 G 42255 Rubrobacter 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1747768 Egibacterales 0.00 1 0 F 1747769 Egibacteraceae 0.00 1 0 G 1747770 Egibacter 0.00 1 1 S 1670831 Egibacter rhizosphaerae 0.52 713 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.52 713 8 P 1117 Cyanobacteriota 0.52 705 111 C 3028117 Cyanophyceae 0.30 412 0 C1 1301283 Oscillatoriophycideae 0.26 351 2 O 1150 Oscillatoriales 0.23 321 0 F 2934961 Sirenicapillariaceae 0.23 321 0 G 2596745 Limnospira 0.23 321 0 S 147322 Limnospira indica 0.23 315 315 S1 2760438 Limnospira indica BM01 0.00 6 6 S1 376219 Limnospira indica PCC 8005 0.02 25 0 F 1892252 Microcoleaceae 0.02 25 23 G 54304 Planktothrix 0.00 2 0 S 1160 Planktothrix agardhii 0.00 2 2 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.00 3 0 F 1892254 Oscillatoriaceae 0.00 3 0 G 1198 Phormidium 0.00 3 0 S 2974039 Phormidium yuhuli 0.00 3 3 S1 2940671 Phormidium yuhuli AB48 0.04 61 0 O 1118 Chroococcales 0.03 46 0 F 1890449 Microcystaceae 0.03 46 0 G 1125 Microcystis 0.03 46 0 G1 2643300 unclassified Microcystis 0.03 46 46 S 1967666 Microcystis sp. MC19 0.01 10 0 F 1890450 Aphanothecaceae 0.01 10 0 G 1453359 Candidatus Atelocyanobacterium 0.01 10 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 10 10 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 3 1 F 2815910 Geminocystaceae 0.00 1 1 G 102234 Cyanobacterium 0.00 1 0 G 669357 Geminocystis 0.00 1 0 G1 2625037 unclassified Geminocystis 0.00 1 1 S 1617448 Geminocystis sp. NIES-3709 0.00 2 1 F 1890464 Chroococcaceae 0.00 1 0 G 693222 Gloeocapsopsis 0.00 1 1 S 2859516 Gloeocapsopsis dulcis 0.05 72 0 O 1955042 Gloeomargaritales 0.05 72 0 F 1955043 Gloeomargaritaceae 0.05 72 0 G 1188227 Gloeomargarita 0.05 72 0 S 1188228 Gloeomargarita lithophora 0.05 72 72 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.03 37 6 O 1161 Nostocales 0.01 14 4 F 1892259 Aphanizomenonaceae 0.01 7 0 G 752201 Sphaerospermopsis 0.01 7 0 S 984207 Sphaerospermopsis torques-reginae 0.01 7 7 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 3 0 G 748770 Dolichospermum 0.00 3 0 S 136073 Dolichospermum compactum 0.00 3 3 S1 1973481 Dolichospermum compactum NIES-806 0.01 12 8 F 1162 Nostocaceae 0.00 2 0 G 1163 Anabaena 0.00 2 0 S 1165 Anabaena cylindrica 0.00 2 2 S1 272123 Anabaena cylindrica PCC 7122 0.00 2 2 G 1177 Nostoc 0.00 5 0 F 1185 Rivulariaceae 0.00 5 0 G 373984 Rivularia 0.00 5 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 5 5 S 373994 Rivularia sp. PCC 7116 0.02 28 0 O 1890424 Synechococcales 0.02 23 0 F 1890426 Synechococcaceae 0.02 23 0 G 1129 Synechococcus 0.01 18 2 G1 2626047 unclassified Synechococcus 0.01 8 8 S 195250 Synechococcus sp. PCC 7336 0.01 7 7 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 1 S 1173263 Synechococcus sp. PCC 7502 0.00 5 1 S 32046 Synechococcus elongatus 0.00 4 4 S1 3115655 Synechococcus elongatus IITB5 0.00 4 0 F 2881426 Prochlorococcaceae 0.00 4 1 G 1218 Prochlorococcus 0.00 3 0 S 1219 Prochlorococcus marinus 0.00 3 3 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.00 1 0 F 1890428 Merismopediaceae 0.00 1 0 G 1142 Synechocystis 0.00 1 0 G1 2640012 unclassified Synechocystis 0.00 1 1 S 3144951 Synechocystis sp. LKSZ1 0.01 15 14 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 0 G 33071 Gloeobacter 0.00 1 0 S 1416614 Gloeobacter kilaueensis 0.00 1 1 S1 1183438 Gloeobacter kilaueensis JS1 0.01 15 0 O 3079749 Leptolyngbyales 0.01 15 0 F 1890438 Leptolyngbyaceae 0.01 15 0 F1 3081713 Leptolyngbya group 0.01 15 0 G 47251 Leptolyngbya 0.01 15 0 G1 2650499 unclassified Leptolyngbya 0.01 15 15 S 2812896 Leptolyngbya sp. 7M 0.00 6 0 O 3079757 Gomontiellales 0.00 6 0 F 1890431 Chamaesiphonaceae 0.00 6 0 G 217161 Chamaesiphon 0.00 6 0 S 1173032 Chamaesiphon minutus 0.00 6 6 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 3 0 O 3079744 Acaryochloridales 0.00 3 0 F 1890429 Acaryochloridaceae 0.00 3 0 G 155977 Acaryochloris 0.00 3 0 G1 2631661 unclassified Acaryochloris 0.00 3 3 S 2740837 Acaryochloris sp. 'Moss Beach' 0.00 2 0 O 2881377 Pseudanabaenales 0.00 2 0 F 1890436 Pseudanabaenaceae 0.00 2 0 G 1152 Pseudanabaena 0.00 2 0 G1 2593292 unclassified Pseudanabaena 0.00 2 2 S 82654 Pseudanabaena sp. PCC 7367 0.00 2 0 O 3039985 Nodosilineales 0.00 2 0 F 3039986 Nodosilineaceae 0.00 2 0 G 170610 Halomicronema 0.00 2 0 S 1209493 Halomicronema hongdechloris 0.00 2 2 S1 1641165 Halomicronema hongdechloris C2206 0.00 1 0 O 1890505 Chroococcidiopsidales 0.00 1 0 F 1890528 Chroococcidiopsidaceae 0.00 1 1 G 54298 Chroococcidiopsis 0.00 1 0 O 2881383 Thermostichales 0.00 1 0 F 2881384 Thermostichaceae 0.00 1 0 G 2881385 Thermostichus 0.00 1 0 S 33070 Thermostichus lividus 0.00 1 1 S1 1917166 Thermostichus lividus PCC 6715 0.16 222 91 P 544448 Mycoplasmatota 0.06 86 43 C 31969 Mollicutes 0.02 28 0 O 2085 Mycoplasmatales 0.02 24 0 F 2092 Mycoplasmataceae 0.02 24 0 G 2093 Mycoplasma 0.01 14 0 G1 2683645 unclassified Mycoplasma 0.01 8 8 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 4 4 S 2967302 Mycoplasma sp. 1018B 0.00 2 2 S 2801918 Mycoplasma sp. E35C 0.01 9 0 G1 656088 Mycoplasma mycoides group 0.01 8 8 S 1179777 Mycoplasma feriruminatoris 0.00 1 0 S 2095 Mycoplasma capricolum 0.00 1 1 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 1 S 292461 Mycoplasma iguanae 0.00 2 0 O1 1665628 unclassified Mycoplasmatales 0.00 2 2 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 2 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 2 0 G 295595 Candidatus Hepatoplasma 0.00 2 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 2 2 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.01 14 0 O 186328 Entomoplasmatales 0.01 14 0 F 2131 Spiroplasmataceae 0.01 14 10 G 2132 Spiroplasma 0.00 2 0 G1 2637901 unclassified Spiroplasma 0.00 2 2 S 3066281 Spiroplasma endosymbiont of Asaphidion curtum 0.00 1 1 S 2139 Spiroplasma clarkii 0.00 1 1 S 2141 Spiroplasma ixodetis 0.00 1 0 O 186329 Acholeplasmatales 0.00 1 0 F 2146 Acholeplasmataceae 0.00 1 0 G 2903100 Mariniplasma 0.00 1 1 S 2735436 Mariniplasma anaerobium 0.03 39 1 O 2790996 Mycoplasmoidales 0.02 26 0 F 2895623 Metamycoplasmataceae 0.02 25 7 G 2767358 Mycoplasmopsis 0.00 6 6 S 33923 Mycoplasmopsis felis 0.00 5 5 S 55603 Mycoplasmopsis caviae 0.00 3 3 S 114880 Mycoplasmopsis columbinasalis 0.00 2 2 S 2113 Mycoplasmopsis californica 0.00 2 2 S 28903 Mycoplasmopsis bovis 0.00 1 0 G 2895509 Metamycoplasma 0.00 1 1 S 2111 Metamycoplasma arthritidis 0.01 12 2 F 2790998 Mycoplasmoidaceae 0.00 5 0 G 2791001 Malacoplasma 0.00 3 3 S 2116 Malacoplasma iowae 0.00 2 0 S 28227 Malacoplasma penetrans 0.00 2 2 S1 272633 Malacoplasma penetrans HF-2 0.00 3 3 G 2995234 Mycoplasmoides 0.00 2 2 G 2129 Ureaplasma 0.00 6 0 C 1912503 Candidatus Izimaplasma 0.00 6 0 O 2975519 Candidatus Izemoplasmatales 0.00 5 0 F 2975520 Candidatus Izemoplasmataceae 0.00 5 0 G 2975521 Candidatus Xianfuyuplasma 0.00 5 5 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.00 1 0 F 3078170 Hujiaoplasmataceae 0.00 1 0 G 3078171 Hujiaoplasma 0.00 1 1 S 2725268 Hujiaoplasma nucleasis 0.09 126 0 P 67819 Armatimonadota 0.07 97 0 C 1077257 Chthonomonadia 0.07 97 0 O 1077263 Chthonomonadales 0.07 97 0 F 1077264 Chthonomonadaceae 0.07 97 0 G 1077265 Chthonomonas 0.07 97 0 S 454171 Chthonomonas calidirosea 0.07 97 97 S1 1303518 Chthonomonas calidirosea T49 0.02 26 0 C 1042312 Armatimonadia 0.02 26 0 O 2494207 Capsulimonadales 0.02 26 0 F 2494208 Capsulimonadaceae 0.02 26 0 G 2494209 Capsulimonas 0.02 26 26 S 2219043 Capsulimonas corticalis 0.00 3 0 C 1663419 Fimbriimonadia 0.00 3 0 O 1663425 Fimbriimonadales 0.00 3 0 F 1663426 Fimbriimonadaceae 0.00 3 0 G 1005038 Fimbriimonas 0.00 3 0 S 1005039 Fimbriimonas ginsengisoli 0.00 3 3 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.09 124 0 P 1297 Deinococcota 0.09 124 1 C 188787 Deinococci 0.05 75 0 O 2762275 Trueperales 0.05 75 0 F 332247 Trueperaceae 0.05 75 0 G 332248 Truepera 0.05 75 75 S 332249 Truepera radiovictrix 0.03 45 0 O 118964 Deinococcales 0.03 45 0 F 183710 Deinococcaceae 0.03 45 13 G 1298 Deinococcus 0.02 21 21 S 328692 Deinococcus aquaticus 0.00 6 6 S 200252 Deinococcus aetherius 0.00 1 0 S 432329 Deinococcus peraridilitoris 0.00 1 1 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 1 1 S 2737050 Deinococcus taeanensis 0.00 1 1 S 1211322 Deinococcus metallilatus 0.00 1 1 S 980427 Deinococcus wulumuqiensis 0.00 1 0 S 310783 Deinococcus deserti 0.00 1 1 S1 546414 Deinococcus deserti VCD115 0.00 3 0 O 68933 Thermales 0.00 3 0 F 188786 Thermaceae 0.00 2 0 G 270 Thermus 0.00 2 0 S 274 Thermus thermophilus 0.00 2 2 S1 762633 Thermus thermophilus SG0.5JP17-16 0.00 1 0 G 186191 Marinithermus 0.00 1 0 S 186192 Marinithermus hydrothermalis 0.00 1 1 S1 869210 Marinithermus hydrothermalis DSM 14884 0.08 116 0 P 200795 Chloroflexota 0.05 71 0 C 388447 Ktedonobacteria 0.05 71 0 O 388448 Ktedonobacterales 0.05 71 0 F 2692416 Ktedonosporobacteraceae 0.05 71 0 G 2692417 Ktedonosporobacter 0.05 71 71 S 2509675 Ktedonosporobacter rubrisoli 0.01 20 5 C 32061 Chloroflexia 0.01 9 0 O 3139175 Candidatus Chloroheliales 0.01 9 0 F 3139177 Candidatus Chloroheliaceae 0.01 9 0 G 3139173 Candidatus Chlorohelix 0.01 9 9 S 3003348 Candidatus Chlorohelix allophototropha 0.00 6 1 O 32064 Chloroflexales 0.00 5 0 O1 1508594 Chloroflexineae 0.00 5 0 F 1106 Chloroflexaceae 0.00 5 1 G 1107 Chloroflexus 0.00 4 0 S 152260 Chloroflexus aggregans 0.00 4 4 S1 326427 Chloroflexus aggregans DSM 9485 0.01 7 0 C 1382928 Ardenticatenia 0.01 7 0 O 3085098 Candidatus Promineifilales 0.01 7 0 F 3085097 Candidatus Promineifilaceae 0.01 7 0 G 1988031 Candidatus Promineifilum 0.01 7 7 S 1806508 Candidatus Promineifilum breve 0.00 6 0 C 292625 Anaerolineae 0.00 6 0 O 292629 Anaerolineales 0.00 6 0 F 292628 Anaerolineaceae 0.00 6 0 G 1649478 Pelolinea 0.00 6 6 S 913107 Pelolinea submarina 0.00 4 0 C 301297 Dehalococcoidia 0.00 4 0 O 1202465 Dehalococcoidales 0.00 4 0 F 1202464 Dehalococcoidaceae 0.00 4 4 G 670486 Dehalogenimonas 0.00 4 0 C 2682225 Tepidiformia 0.00 4 0 O 2682226 Tepidiformales 0.00 4 0 F 2682227 Tepidiformaceae 0.00 4 4 G 2682228 Tepidiforma 0.00 2 0 P1 167963 Chloroflexota incertae sedis 0.00 2 0 G 262406 Thermobaculum 0.00 2 0 S 166501 Thermobaculum terrenum 0.00 2 2 S1 525904 Thermobaculum terrenum ATCC BAA-798 0.00 2 0 C 2364196 Candidatus Thermofonsia 0.00 2 0 O 2364208 Phototrophicales 0.00 2 0 F 2922432 Phototrophicaceae 0.00 2 0 G 2922426 Phototrophicus 0.00 2 2 S 2710758 Phototrophicus methaneseepsis 2.48 3401 0 D1 1783270 FCB group 2.48 3394 0 D2 68336 Bacteroidota/Chlorobiota group 2.47 3384 6 P 976 Bacteroidota 1.83 2501 0 C 200643 Bacteroidia 1.82 2497 9 O 171549 Bacteroidales 1.54 2111 50 F 171552 Prevotellaceae 1.04 1421 145 G 2974251 Segatella 0.87 1186 950 S 165179 Segatella copri 0.17 236 236 S1 537011 Segatella copri DSM 18205 0.06 78 78 S 2518605 Segatella hominis 0.01 12 12 S 28135 Segatella oris 0.41 559 88 G 838 Prevotella 0.12 170 170 S 28132 Prevotella melaninogenica 0.08 104 0 G1 2638335 unclassified Prevotella 0.07 96 0 S 652716 Prevotella sp. oral taxon 299 0.07 96 96 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 5 5 S 2691580 Prevotella sp. Rep29 0.00 3 3 S 2937774 Prevotella sp. E15-22 0.08 103 103 S 28129 Prevotella denticola 0.02 24 24 S 28133 Prevotella nigrescens 0.01 16 16 S 28131 Prevotella intermedia 0.01 16 0 S 52227 Prevotella dentalis 0.01 16 16 S1 908937 Prevotella dentalis DSM 3688 0.01 16 16 S 470565 Prevotella histicola 0.01 11 11 S 2801997 Prevotella herbatica 0.00 5 0 S 589436 Prevotella fusca 0.00 5 5 S1 1236517 Prevotella fusca JCM 17724 0.00 2 2 S 28128 Prevotella corporis 0.00 2 2 S 28137 Prevotella veroralis 0.00 2 2 S 1177574 Prevotella jejuni 0.05 64 0 G 2884814 Pseudoprevotella 0.05 64 64 S 2133944 Pseudoprevotella muciniphila 0.01 16 0 G 2974257 Hoylesella 0.01 10 10 S 28127 Hoylesella buccalis 0.00 6 6 S 76123 Hoylesella enoeca 0.00 1 1 G 577309 Paraprevotella 0.21 283 0 F 815 Bacteroidaceae 0.18 242 0 G 909656 Phocaeicola 0.18 242 242 S 357276 Phocaeicola dorei 0.03 41 2 G 816 Bacteroides 0.03 37 37 S 817 Bacteroides fragilis 0.00 2 2 S 818 Bacteroides thetaiotaomicron 0.05 63 0 F 171551 Porphyromonadaceae 0.05 62 0 G 836 Porphyromonas 0.02 27 27 S 322095 Porphyromonas somerae 0.02 25 0 G1 2645799 unclassified Porphyromonas 0.02 25 25 S 712435 Porphyromonas sp. oral taxon 275 0.01 10 0 S 28123 Porphyromonas asaccharolytica 0.01 10 10 S1 879243 Porphyromonas asaccharolytica DSM 20707 0.00 1 0 G 1159323 Macellibacteroides 0.00 1 0 G1 1243006 environmental samples 0.00 1 1 S 1243007 uncultured Macellibacteroides sp. 0.01 19 0 F 2005525 Tannerellaceae 0.01 18 0 G 195950 Tannerella 0.01 18 18 S 712710 Tannerella serpentiformis 0.00 1 1 G 375288 Parabacteroides 0.00 4 0 F 171550 Rikenellaceae 0.00 4 0 G 1647173 Acetobacteroides 0.00 4 0 G1 1760810 environmental samples 0.00 4 4 S 1760811 uncultured Acetobacteroides sp. 0.00 2 0 F 2005473 Muribaculaceae 0.00 1 0 G 2518495 Duncaniella 0.00 1 1 G1 2649562 unclassified Duncaniella 0.00 1 0 G 2815786 Sodaliphilus 0.00 1 1 S 2606626 Sodaliphilus pleomorphus 0.00 2 2 F 2005519 Barnesiellaceae 0.00 1 0 F 1853231 Odoribacteraceae 0.00 1 0 G 283168 Odoribacter 0.00 1 1 S 28118 Odoribacter splanchnicus 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 294702 Proteiniphilum 0.00 1 1 S 1642647 Proteiniphilum saccharofermentans 0.00 1 0 F 2005523 Paludibacteraceae 0.00 1 0 G 346096 Paludibacter 0.00 1 0 S 185300 Paludibacter propionicigenes 0.00 1 1 S1 694427 Paludibacter propionicigenes WB4 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.00 4 0 O 1970189 Marinilabiliales 0.00 4 2 F 1573805 Marinifilaceae 0.00 2 0 G 866673 Marinifilum 0.00 2 0 G1 866674 environmental samples 0.00 2 2 S 1127472 uncultured Marinifilum sp. 0.50 689 0 C 117743 Flavobacteriia 0.50 689 3 O 200644 Flavobacteriales 0.27 363 4 F 2762318 Weeksellaceae 0.26 351 7 F1 2782232 Chryseobacterium group 0.25 341 102 G 59732 Chryseobacterium 0.07 90 90 S 1813611 Chryseobacterium cucumeris 0.04 59 59 S 536441 Chryseobacterium taklimakanense 0.04 49 49 S 2754694 Chryseobacterium manosquense 0.02 25 25 S 1265445 Chryseobacterium camelliae 0.01 10 0 G1 2593645 unclassified Chryseobacterium 0.00 6 6 S 3138177 Chryseobacterium sp. POE27 0.00 2 2 S 3093923 Chryseobacterium sp. JJR-5R 0.00 2 2 S 2713414 Chryseobacterium sp. POL2 0.00 2 2 S 253 Chryseobacterium indologenes 0.00 1 1 S 1493872 Chryseobacterium shandongense 0.00 1 1 S 2759528 Chryseobacterium capnotolerans 0.00 1 1 S 2929800 Chryseobacterium suipulveris 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.00 3 1 G 2782231 Kaistella 0.00 1 1 S 266749 Kaistella jeonii 0.00 1 1 S 2820270 Candidatus Kaistella beijingensis 0.00 4 0 G 59734 Empedobacter 0.00 4 4 S 343874 Empedobacter falsenii 0.00 3 3 G 308865 Elizabethkingia 0.00 1 1 G 28250 Ornithobacterium 0.21 286 11 F 49546 Flavobacteriaceae 0.13 183 3 G 1016 Capnocytophaga 0.09 127 127 S 1017 Capnocytophaga gingivalis 0.03 46 0 G1 2640652 unclassified Capnocytophaga 0.03 46 46 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 3 3 S 45243 Capnocytophaga haemolytica 0.00 2 2 S 28188 Capnocytophaga canimorsus 0.00 1 1 S 1019 Capnocytophaga sputigena 0.00 1 1 S 2708117 Capnocytophaga endodontalis 0.06 77 18 G 237 Flavobacterium 0.03 44 44 S 996 Flavobacterium columnare 0.00 6 4 G1 196869 unclassified Flavobacterium 0.00 1 1 S 2775246 Flavobacterium sp. CS20 0.00 1 1 S 2748319 Flavobacterium sp. I3-2 0.00 2 2 S 2870839 Flavobacterium agricola 0.00 2 2 S 1678728 Flavobacterium kingsejongi 0.00 2 2 S 2906078 Flavobacterium oreochromis 0.00 1 1 S 3003263 Flavobacterium eburneipallidum 0.00 1 1 S 2704140 Flavobacterium bizetiae 0.00 1 1 S 2816357 Flavobacterium endoglycinae 0.01 7 0 G 286104 Winogradskyella 0.00 4 4 S 2686077 Winogradskyella forsetii 0.00 2 0 G1 2615021 unclassified Winogradskyella 0.00 2 2 S 754409 Winogradskyella sp. PG-2 0.00 1 1 S 2697010 Winogradskyella helgolandensis 0.00 3 0 G 83612 Psychroflexus 0.00 3 0 G1 196864 unclassified Psychroflexus 0.00 3 3 S 2777186 Psychroflexus sp. ALD_RP9 0.00 3 0 G 290174 Aquimarina 0.00 3 1 G1 2627091 unclassified Aquimarina 0.00 2 2 S 1714849 Aquimarina sp. AD10 0.00 2 0 G 2967089 Abyssalbus 0.00 2 2 S 2926907 Abyssalbus ytuae 0.02 34 0 O1 313602 Flavobacteriales incertae sedis 0.02 34 0 G 336809 Candidatus Karelsulcia 0.02 34 34 S 336810 Candidatus Karelsulcia muelleri 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 1 G 34098 Blattabacterium 0.00 1 0 F 1755828 Ichthyobacteriaceae 0.00 1 0 G 1755829 Ichthyobacterium 0.00 1 1 S 242600 Ichthyobacterium seriolicida 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 332102 Fluviicola 0.00 1 0 S 191579 Fluviicola taffensis 0.00 1 1 S1 755732 Fluviicola taffensis DSM 16823 0.09 125 0 C 768503 Cytophagia 0.09 125 2 O 768507 Cytophagales 0.05 73 0 F 89373 Cytophagaceae 0.05 73 0 G 107 Spirosoma 0.05 70 70 S 2666025 Spirosoma endbachense 0.00 1 0 G1 2621999 unclassified Spirosoma 0.00 1 1 S 2745947 Spirosoma sp. KUDC1026 0.00 1 1 S 2728024 Spirosoma rhododendri 0.00 1 1 S 2735870 Spirosoma taeanense 0.02 34 0 F 3141702 Leadbetterellaceae 0.02 34 34 G 312278 Emticicia 0.00 6 0 F 1853232 Hymenobacteraceae 0.00 5 2 G 323449 Pontibacter 0.00 2 0 G1 2648980 unclassified Pontibacter 0.00 2 2 S 2571030 Pontibacter sp. SGAir0037 0.00 1 1 S 2694929 Pontibacter russatus 0.00 1 1 G 89966 Hymenobacter 0.00 4 0 F 2896860 Spirosomataceae 0.00 2 2 G 120831 Dyadobacter 0.00 1 1 G 105 Runella 0.00 1 0 G 332157 Larkinella 0.00 1 1 S 332158 Larkinella insperata 0.00 2 0 F 1501348 Amoebophilaceae 0.00 2 0 G 273135 Candidatus Cardinium 0.00 2 2 S 247481 Candidatus Cardinium hertigii 0.00 2 0 F 2762286 Fulvivirgaceae 0.00 2 0 G 1433993 Chryseolinea 0.00 2 2 S 2321403 Chryseolinea soli 0.00 1 0 F 563798 Cyclobacteriaceae 0.00 1 0 G 390846 Echinicola 0.00 1 1 S 1807691 Echinicola rosea 0.00 1 0 F 1937968 Bernardetiaceae 0.00 1 1 G 1937972 Bernardetia 0.04 56 0 C 117747 Sphingobacteriia 0.04 56 0 O 200666 Sphingobacteriales 0.04 55 0 F 84566 Sphingobacteriaceae 0.03 35 29 G 84567 Pedobacter 0.00 3 3 S 188932 Pedobacter cryoconitis 0.00 2 0 G1 2628915 unclassified Pedobacter 0.00 2 2 S 2482728 Pedobacter sp. G11 0.00 1 1 S 2895286 Pedobacter mucosus 0.01 14 7 G 28453 Sphingobacterium 0.00 3 3 S 662858 Sphingobacterium bambusae 0.00 2 2 S 28454 Sphingobacterium multivorum 0.00 2 0 G1 2609468 unclassified Sphingobacterium 0.00 2 2 S 1538644 Sphingobacterium sp. ML3W 0.00 5 2 G 423349 Mucilaginibacter 0.00 1 1 S 551996 Mucilaginibacter gossypii 0.00 1 1 S 652787 Mucilaginibacter mallensis 0.00 1 1 G1 2617802 unclassified Mucilaginibacter 0.00 1 0 G 1773450 Anseongella 0.00 1 1 S 496056 Anseongella ginsenosidimutans 0.00 1 0 F 3088888 Aurantibacillaceae 0.00 1 0 G 3088889 Aurantibacillus 0.00 1 1 S 3036359 Aurantibacillus circumpalustris 0.01 7 0 C 1853228 Chitinophagia 0.01 7 0 O 1853229 Chitinophagales 0.01 7 0 F 563835 Chitinophagaceae 0.00 6 0 G 2812019 Pseudocnuella 0.00 6 6 S 2502779 Pseudocnuella soli 0.00 1 0 G 79328 Chitinophaga 0.00 1 0 G1 2619133 unclassified Chitinophaga 0.00 1 1 S 2952571 Chitinophaga sp. HK235 0.00 5 0 P 1090 Chlorobiota 0.00 5 0 C 191410 Chlorobiia 0.00 5 1 O 191411 Chlorobiales 0.00 3 0 F 2968741 Chloroherpetonaceae 0.00 3 0 G 100715 Chloroherpeton 0.00 3 0 S 100716 Chloroherpeton thalassium 0.00 3 3 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 1 F 191412 Chlorobiaceae 0.00 5 0 P 1853220 Rhodothermota 0.00 5 0 C 1853222 Rhodothermia 0.00 5 3 O 1853224 Rhodothermales 0.00 2 0 F 563843 Rhodothermaceae 0.00 2 0 G 29548 Rhodothermus 0.00 2 2 S 29549 Rhodothermus marinus 0.01 7 0 P 142182 Gemmatimonadota 0.01 7 0 C 219685 Gemmatimonadia 0.01 7 0 O 219686 Gemmatimonadales 0.01 7 0 F 219687 Gemmatimonadaceae 0.00 6 0 G 173479 Gemmatimonas 0.00 6 6 S 1379270 Gemmatimonas phototrophica 0.00 1 0 G 1706036 Gemmatirosa 0.00 1 1 S 861299 Gemmatirosa kalamazoonensis 0.43 594 6 P 200940 Thermodesulfobacteriota 0.33 458 0 C 3031651 Desulfuromonadia 0.33 458 0 O 69541 Desulfuromonadales 0.33 451 0 F 213421 Desulfuromonadaceae 0.33 451 447 G 890 Desulfuromonas 0.00 3 3 S 1603606 Desulfuromonas soudanensis 0.00 1 1 S 57664 Desulfuromonas thiophila 0.00 5 0 F 3031659 Geopsychrobacteraceae 0.00 5 0 G 37817 Desulfuromusa 0.00 5 0 G1 97902 environmental samples 0.00 5 5 S 219183 uncultured Desulfuromusa sp. 0.00 2 0 F 3031665 Geoalkalibacteraceae 0.00 2 0 G 392332 Geoalkalibacter 0.00 2 2 S 483547 Geoalkalibacter subterraneus 0.08 108 0 C 3031646 Desulfarculia 0.08 108 0 O 453227 Desulfarculales 0.08 108 0 F 453228 Desulfarculaceae 0.08 108 0 G 453229 Desulfarculus 0.08 108 0 S 453230 Desulfarculus baarsii 0.08 108 108 S1 644282 Desulfarculus baarsii DSM 2075 0.01 11 0 C 67799 Thermodesulfobacteria 0.01 11 9 O 188710 Thermodesulfobacteriales 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 0 G 2033601 Thermosulfuriphilus 0.00 1 1 S 1936021 Thermosulfuriphilus ammonigenes 0.00 1 0 F 3031464 Thermodesulfatatoraceae 0.00 1 0 G 241192 Thermodesulfatator 0.00 1 0 S 171695 Thermodesulfatator indicus 0.00 1 1 S1 667014 Thermodesulfatator indicus DSM 15286 0.00 5 0 C 3031449 Desulfovibrionia 0.00 5 0 O 213115 Desulfovibrionales 0.00 5 0 F 194924 Desulfovibrionaceae 0.00 2 0 G 2910978 Megalodesulfovibrio 0.00 2 0 S 879 Megalodesulfovibrio gigas 0.00 2 2 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.00 1 0 G 2794998 Maridesulfovibrio 0.00 1 0 S 880 Maridesulfovibrio salexigens 0.00 1 1 S1 526222 Maridesulfovibrio salexigens DSM 2638 0.00 1 0 G 2910984 Solidesulfovibrio 0.00 1 0 S 184917 Solidesulfovibrio magneticus 0.00 1 1 S1 573370 Solidesulfovibrio magneticus RS-1 0.00 2 0 C 3024418 Desulfobacteria 0.00 2 1 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 1 G 2289 Desulfobacter 0.00 2 0 C 3031451 Desulfobulbia 0.00 2 0 O 3024411 Desulfobulbales 0.00 2 0 F 213121 Desulfobulbaceae 0.00 2 0 G 893 Desulfobulbus 0.00 2 2 S 1986146 Desulfobulbus oralis 0.00 1 0 C 3031450 Candidatus Desulfofervidia 0.00 1 0 O 3031460 Candidatus Desulfofervidales 0.00 1 0 F 1902584 Candidatus Desulfofervidaceae 0.00 1 0 G 1902583 Candidatus Desulfofervidus 0.00 1 1 S 1621989 Candidatus Desulfofervidus auxilii 0.00 1 0 C 3031647 Desulfobaccia 0.00 1 0 O 3031655 Desulfobaccales 0.00 1 0 F 3031656 Desulfobaccaceae 0.00 1 0 G 60892 Desulfobacca 0.00 1 0 S 60893 Desulfobacca acetoxidans 0.00 1 1 S1 880072 Desulfobacca acetoxidans DSM 11109 0.41 568 0 P 32066 Fusobacteriota 0.41 568 0 C 203490 Fusobacteriia 0.41 568 1 O 203491 Fusobacteriales 0.26 354 2 F 1129771 Leptotrichiaceae 0.26 351 68 G 32067 Leptotrichia 0.16 224 224 S 157687 Leptotrichia wadei 0.02 23 23 S 157688 Leptotrichia hofstadii 0.01 16 1 G1 2633022 unclassified Leptotrichia 0.01 9 9 S 712362 Leptotrichia sp. oral taxon 221 0.00 3 3 S 712361 Leptotrichia sp. oral taxon 218 0.00 1 1 S 712357 Leptotrichia sp. oral taxon 212 0.00 1 1 S 712368 Leptotrichia sp. oral taxon 498 0.00 1 1 S 3058373 Leptotrichia sp. HMT-225 0.01 14 14 S 554406 Leptotrichia hongkongensis 0.00 5 5 S 157691 Leptotrichia shahii 0.00 1 1 S 109328 Leptotrichia trevisanii 0.00 1 0 G 34104 Streptobacillus 0.00 1 1 S 34105 Streptobacillus moniliformis 0.15 212 0 F 203492 Fusobacteriaceae 0.15 212 163 G 848 Fusobacterium 0.02 25 24 S 859 Fusobacterium necrophorum 0.00 1 1 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.01 7 7 S 851 Fusobacterium nucleatum 0.00 5 5 S 76857 Fusobacterium polymorphum 0.00 5 1 S 155615 Fusobacterium vincentii 0.00 4 4 S1 1307427 Fusobacterium vincentii ChDC F8 0.00 3 0 S 1583098 Fusobacterium hwasookii 0.00 3 3 S1 1307443 Fusobacterium hwasookii ChDC F206 0.00 2 2 S 2663009 Fusobacterium pseudoperiodonticum 0.00 1 0 S 849 Fusobacterium gonidiaformans 0.00 1 1 S1 469615 Fusobacterium gonidiaformans ATCC 25563 0.00 1 1 S 76859 Fusobacterium animalis 0.00 1 0 F 3072461 Haliovirgaceae 0.00 1 0 G 3072462 Haliovirga 0.00 1 1 S 2996794 Haliovirga abyssi 0.15 202 2 D1 1783257 PVC group 0.09 118 0 P 203682 Planctomycetota 0.08 112 7 C 203683 Planctomycetia 0.05 73 0 O 2691356 Isosphaerales 0.05 73 5 F 1763524 Isosphaeraceae 0.05 65 0 G 2680020 Tautonia 0.05 65 65 S 2527974 Tautonia plasticadhaerens 0.00 2 0 G 127 Isosphaera 0.00 2 0 S 128 Isosphaera pallida 0.00 2 2 S1 575540 Isosphaera pallida ATCC 43644 0.00 1 0 G 1763521 Paludisphaera 0.00 1 1 S 1387353 Paludisphaera borealis 0.01 12 0 O 112 Planctomycetales 0.01 12 1 F 126 Planctomycetaceae 0.00 6 0 G 1649480 Planctopirus 0.00 6 6 S 2528019 Planctopirus ephydatiae 0.00 4 0 G 118 Planctomyces 0.00 4 0 G1 2648843 unclassified Planctomyces 0.00 3 3 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 S 1636152 Planctomyces sp. SH-PL62 0.00 1 0 G 1649453 Gimesia 0.00 1 1 S 2527964 Gimesia aquarii 0.01 11 2 O 2691354 Pirellulales 0.00 6 0 F 2691357 Pirellulaceae 0.00 3 0 G 2795779 Rosistilla 0.00 3 3 S 2527990 Rosistilla oblonga 0.00 2 2 G 2795973 Stieleria 0.00 1 0 G 123 Pirellula 0.00 1 0 G1 2639138 unclassified Pirellula 0.00 1 1 S 1632865 Pirellula sp. SH-Sr6A 0.00 2 2 F 2691359 Lacipirellulaceae 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.01 9 0 O 2691355 Gemmatales 0.01 9 1 F 1914233 Gemmataceae 0.01 7 0 G 113 Gemmata 0.01 7 7 S 114 Gemmata obscuriglobus 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.00 3 0 C 666505 Phycisphaerae 0.00 2 0 O 2483366 Sedimentisphaerales 0.00 2 0 F 2690158 Anaerohalosphaeraceae 0.00 2 0 G 2690159 Anaerohalosphaera 0.00 2 2 S 1936003 Anaerohalosphaera lusitana 0.00 1 0 O 666506 Phycisphaerales 0.00 1 0 F 666507 Phycisphaeraceae 0.00 1 0 G 2913022 Mucisphaera 0.00 1 1 S 2527982 Mucisphaera calidilacus 0.00 3 0 C 2897345 Candidatus Uabimicrobiia 0.00 3 0 O 2897347 Candidatus Uabimicrobiales 0.00 3 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 3 0 G 2897349 Candidatus Uabimicrobium 0.00 3 3 S 2596890 Candidatus Uabimicrobium amorphum 0.05 70 0 P 74201 Verrucomicrobiota 0.03 43 0 C 203494 Verrucomicrobiia 0.03 43 1 O 48461 Verrucomicrobiales 0.03 42 18 F 203557 Verrucomicrobiaceae 0.01 16 0 G 2735 Verrucomicrobium 0.01 16 0 G1 2625155 unclassified Verrucomicrobium 0.01 16 16 S 1882831 Verrucomicrobium sp. GAS474 0.01 7 0 G 1348508 Roseimicrobium 0.01 7 0 G1 2711230 unclassified Roseimicrobium 0.01 7 7 S 2711231 Roseimicrobium sp. ORNL1 0.00 1 0 G 518753 Luteolibacter 0.00 1 0 G1 2637149 unclassified Luteolibacter 0.00 1 1 S 2995170 Luteolibacter sp. SL250 0.01 15 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 15 0 G 1541670 Methylacidimicrobium 0.01 15 15 G1 2730358 unclassified Methylacidimicrobium 0.01 11 3 C 414999 Opitutia 0.00 5 0 O 415001 Puniceicoccales 0.00 5 0 O1 3056381 Puniceicoccales incertae sedis 0.00 5 0 G 3049269 Candidatus Pelagisphaera 0.00 5 5 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 3 0 O 415000 Opitutales 0.00 3 2 F 134623 Opitutaceae 0.00 1 0 G 2892920 Synoicihabitans 0.00 1 1 S 2909285 Synoicihabitans lomoniglobus 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.01 12 0 P 204428 Chlamydiota 0.01 12 10 C 204429 Chlamydiia 0.00 1 0 O 51291 Chlamydiales 0.00 1 1 F 809 Chlamydiaceae 0.00 1 0 O 1963360 Parachlamydiales 0.00 1 0 F 92713 Parachlamydiaceae 0.00 1 0 G 282132 Candidatus Protochlamydia 0.00 1 1 S 389348 Candidatus Protochlamydia naegleriophila 0.06 79 0 P 29547 Campylobacterota 0.06 79 0 C 3031852 Epsilonproteobacteria 0.06 78 2 O 213849 Campylobacterales 0.02 32 0 F 72294 Campylobacteraceae 0.02 32 12 G 194 Campylobacter 0.01 13 13 S 827 Campylobacter ureolyticus 0.00 3 3 S 76517 Campylobacter hominis 0.00 2 2 S 199 Campylobacter concisus 0.00 1 0 G1 2593542 unclassified Campylobacter 0.00 1 1 S 2840180 Campylobacter sp. 19-13652 0.00 1 1 S 449520 Campylobacter canadensis 0.02 31 0 F 2932623 Sulfurospirillaceae 0.02 31 0 G 57665 Sulfurospirillum 0.02 31 0 S 66821 Sulfurospirillum multivorans 0.02 31 31 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 6 1 F 2808963 Arcobacteraceae 0.00 5 0 G 2321111 Aliarcobacter 0.00 5 5 S 28198 Aliarcobacter cryaerophilus 0.00 5 0 F 72293 Helicobacteraceae 0.00 5 2 G 209 Helicobacter 0.00 3 3 S 213 Helicobacter cinaedi 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 202746 Sulfurimonas 0.00 1 0 G1 2623549 unclassified Sulfurimonas 0.00 1 1 S 2022749 Sulfurimonas sp. 0.00 1 1 S 2672570 Sulfurimonas aquatica 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 2795691 Nitratiruptoraceae 0.00 1 0 G 269258 Nitratiruptor 0.00 1 1 G1 2624044 unclassified Nitratiruptor 0.04 55 0 D1 2323 Bacteria incertae sedis 0.04 55 0 D2 1783234 Bacteria candidate phyla 0.03 41 5 P 95818 Candidatus Saccharibacteria 0.03 36 1 C 2093818 Candidatus Saccharimonadia 0.01 19 0 O 2093825 Candidatus Saccharimonadales 0.01 19 0 F 2171986 Candidatus Saccharimonadaceae 0.01 19 0 G 1331051 Candidatus Saccharimonas 0.01 19 19 S 1332188 Candidatus Saccharimonas aalborgensis 0.01 16 0 O 2093819 Candidatus Nanosynbacterales 0.01 16 0 F 2093822 Candidatus Nanosynbacteraceae 0.01 16 2 G 2093823 Candidatus Nanosynbacter 0.01 14 14 S 2093824 Candidatus Nanosynbacter lyticus 0.01 14 0 D3 95901 Candidatus Dependentiae 0.01 14 0 C 2497643 Candidatus Babeliae 0.01 14 0 O 2497644 Candidatus Babeliales 0.01 14 0 F 2953756 Candidatus Chromulinivoraceae 0.01 14 0 G 2953757 Candidatus Chromulinivorax 0.01 14 14 S 2066483 Candidatus Chromulinivorax destructor 0.01 10 0 P 203691 Spirochaetota 0.01 10 0 C 203692 Spirochaetia 0.01 7 0 O 136 Spirochaetales 0.00 4 0 F 1643685 Borreliaceae 0.00 4 0 G 64895 Borreliella 0.00 4 4 S 29519 Borreliella garinii 0.00 2 0 F 2845253 Treponemataceae 0.00 2 0 G 157 Treponema 0.00 1 0 S 167 Treponema succinifaciens 0.00 1 1 S1 869209 Treponema succinifaciens DSM 2489 0.00 1 0 S 88058 Treponema primitia 0.00 1 1 S1 545694 Treponema primitia ZAS-2 0.00 1 0 F 137 Spirochaetaceae 0.00 1 0 G 1616789 Salinispira 0.00 1 1 S 1307761 Salinispira pacifica 0.00 3 0 O 1643688 Leptospirales 0.00 3 0 F 170 Leptospiraceae 0.00 3 1 G 171 Leptospira 0.00 1 0 S 172 Leptospira biflexa 0.00 1 1 S1 145259 Leptospira biflexa serovar Patoc 0.00 1 1 S 28183 Leptospira santarosai 0.01 7 0 P 508458 Synergistota 0.01 7 0 C 649775 Synergistia 0.01 7 0 O 649776 Synergistales 0.00 6 0 F 649777 Synergistaceae 0.00 6 0 G 81411 Aminomonas 0.00 6 0 S 81412 Aminomonas paucivorans 0.00 6 6 S1 584708 Aminomonas paucivorans DSM 12260 0.00 1 0 F 3029088 Dethiosulfovibrionaceae 0.00 1 0 G 428711 Jonquetella 0.00 1 0 S 428712 Jonquetella anthropi 0.00 1 1 S1 885272 Jonquetella anthropi DSM 22815 0.00 6 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.00 6 0 P 1293497 Nitrospinota 0.00 6 0 C 1293498 Nitrospinia 0.00 6 0 O 1293499 Nitrospinales 0.00 6 0 F 407032 Nitrospinaceae 0.00 6 0 G 35800 Nitrospina 0.00 6 6 S 1323948 Nitrospina watsonii 0.00 6 0 P 2818505 Myxococcota 0.00 5 0 P1 3031711 Polyangia 0.00 5 0 O 3031712 Polyangiales 0.00 4 0 F 49 Polyangiaceae 0.00 4 0 G 39643 Sorangium 0.00 4 4 S 56 Sorangium cellulosum 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 39 Archangiaceae 0.00 1 0 G 47 Archangium 0.00 1 1 S 48 Archangium gephyra 0.00 3 0 P 200783 Aquificota 0.00 3 0 C 187857 Aquificia 0.00 3 0 O 32069 Aquificales 0.00 2 0 F 224027 Hydrogenothermaceae 0.00 2 2 G 212790 Sulfurihydrogenibium 0.00 1 1 F 64898 Aquificaceae 0.00 3 0 P 200930 Deferribacterota 0.00 3 0 C 68337 Deferribacteres 0.00 3 2 O 191393 Deferribacterales 0.00 1 0 F 2945022 Flexistipitaceae 0.00 1 0 G 2351 Flexistipes 0.00 1 0 S 2352 Flexistipes sinusarabici 0.00 1 1 S1 717231 Flexistipes sinusarabici DSM 4947 0.00 3 0 P 57723 Acidobacteriota 0.00 3 0 C 533205 Holophagae 0.00 2 0 O 574975 Holophagales 0.00 2 0 F 574976 Holophagaceae 0.00 2 2 G 44675 Geothrix 0.00 1 0 O 533206 Acanthopleuribacterales 0.00 1 0 F 533207 Acanthopleuribacteraceae 0.00 1 0 G 2915177 Sulfidibacter 0.00 1 1 S 2818388 Sulfidibacter corallicola 0.00 2 0 P 74152 Elusimicrobiota 0.00 2 0 C 641853 Elusimicrobia 0.00 2 0 O 641854 Elusimicrobiales 0.00 2 0 F 641876 Elusimicrobiaceae 0.00 2 0 G 423604 Elusimicrobium 0.00 2 0 S 423605 Elusimicrobium minutum 0.00 2 2 S1 445932 Elusimicrobium minutum Pei191 0.00 2 0 P 3018035 Bdellovibrionota 0.00 2 0 C 3031419 Bacteriovoracia 0.00 2 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 1 0 F 1652132 Halobacteriovoraceae 0.00 1 0 G 1652133 Halobacteriovorax 0.00 1 0 G1 2639665 unclassified Halobacteriovorax 0.00 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 1 0 P 200918 Thermotogota 0.00 1 0 C 188708 Thermotogae 0.00 1 0 O 1643946 Kosmotogales 0.00 1 0 F 1643948 Kosmotogaceae 0.00 1 0 G 651456 Kosmotoga 0.00 1 1 S 1330330 Kosmotoga pacifica 0.00 1 0 P 67818 Atribacterota 0.00 1 0 C 2847774 Atribacteria 0.00 1 0 O 2847775 Atribacterales 0.00 1 0 F 2847776 Atribacteraceae 0.00 1 0 G 2847777 Atribacter 0.00 1 1 S 2847778 Atribacter laminatus 0.00 6 0 D 2157 Archaea 0.00 6 0 P 28890 Euryarchaeota 0.00 6 0 P1 2290931 Stenosarchaea group 0.00 6 0 C 183963 Halobacteria 0.00 6 1 O 2235 Halobacteriales 0.00 3 0 F 1644061 Natrialbaceae 0.00 2 2 G 88723 Natrinema 0.00 1 0 G 2993618 Halosolutus 0.00 1 1 S 2931975 Halosolutus gelatinilyticus 0.00 2 0 F 2236 Halobacteriaceae 0.00 2 0 G 1656823 Halanaeroarchaeum 0.00 2 0 G1 2625373 unclassified Halanaeroarchaeum 0.00 2 2 S 2866382 Halanaeroarchaeum sp. HSR-CO 0.16 216 0 D 10239 Viruses 0.08 112 0 C 2840056 Naldaviricetes 0.08 112 0 O 2840070 Lefavirales 0.08 112 0 F 10442 Baculoviridae 0.08 112 0 G 558017 Betabaculovirus 0.08 112 0 S 3051997 Betabaculovirus chofumiferanae 0.08 112 112 S1 56947 Choristoneura fumiferana granulovirus 0.08 104 0 D1 2731341 Duplodnaviria 0.08 104 0 K 2731360 Heunggongvirae 0.08 104 0 P 2731618 Uroviricota 0.08 104 0 C 2731619 Caudoviricetes 0.06 83 0 F 2946167 Peduoviridae 0.06 83 0 G 2948703 Evevirus 0.06 83 0 S 2955874 Evevirus ev239 0.06 83 83 S1 2695847 Escherichia phage ESSI2_ev239 0.01 20 0 F 2169529 Ackermannviridae 0.01 20 0 G 2731621 Taipeivirus 0.01 20 0 S 2169687 Taipeivirus 0507KN21 0.01 20 20 S1 2991282 Klebsiella phage 0507-KN2-1 0.00 1 0 G 186789 Punavirus 0.00 1 0 S 10678 Punavirus P1 0.00 1 1 S1 2886926 Escherichia phage P1