15.69 20177 20177 U 0 unclassified 84.31 108391 63 R 1 root 84.06 108077 3 R1 131567 cellular organisms 84.06 108072 4058 D 2 Bacteria 55.72 71640 512 P 1224 Pseudomonadota 29.05 37345 196 C 28211 Alphaproteobacteria 20.42 26250 60 O 204441 Rhodospirillales 20.14 25898 0 F 2844601 Stellaceae 20.14 25898 0 G 93 Stella 20.14 25898 25898 S 94 Stella humosa 0.20 259 13 F 433 Acetobacteraceae 0.13 172 0 G 512381 Acidisoma 0.13 172 0 G1 2634065 unclassified Acidisoma 0.13 172 172 S 3040935 Acidisoma sp. PAMC 29798 0.03 38 0 G 125216 Roseomonas 0.02 21 21 S 2768162 Roseomonas haemaphysalidis 0.01 14 14 S 2768161 Roseomonas marmotae 0.00 3 3 S 1750527 Roseomonas fluvialis 0.01 17 0 G 35812 Roseococcus 0.01 17 17 S 2771361 Roseococcus microcysteis 0.01 15 0 G 504465 Rhodovastum 0.01 15 15 S 504468 Rhodovastum atsumiense 0.00 1 0 G 434 Acetobacter 0.00 1 1 S 438 Acetobacter pasteurianus 0.00 1 1 G 522 Acidiphilium 0.00 1 0 G 1434011 Komagataeibacter 0.00 1 1 S 215221 Komagataeibacter rhaeticus 0.00 1 0 G 2870717 Pseudoroseomonas 0.00 1 1 S 204525 Pseudoroseomonas cervicalis 0.02 21 0 F 41295 Rhodospirillaceae 0.02 20 0 G 111830 Defluviicoccus 0.02 20 20 S 111831 Defluviicoccus vanus 0.00 1 0 G 1263978 Candidatus Endolissoclinum 0.00 1 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.01 7 0 F 2690195 Elioraeaceae 0.01 7 0 G 457933 Elioraea 0.01 7 7 S 2843330 Elioraea tepida 0.00 5 0 F 2829815 Azospirillaceae 0.00 3 0 G 191 Azospirillum 0.00 1 0 S 193 Azospirillum lipoferum 0.00 1 1 S1 862719 Azospirillum lipoferum 4B 0.00 1 1 S 528244 Azospirillum thiophilum 0.00 1 1 S 1064539 Azospirillum baldaniorum 0.00 2 2 G 204447 Skermanella 7.64 9820 130 O 356 Hyphomicrobiales 7.20 9260 78 F 119045 Methylobacteriaceae 7.13 9164 8499 G 407 Methylobacterium 0.25 321 233 G1 2615210 unclassified Methylobacterium 0.02 28 28 S 1479019 Methylobacterium sp. C1 0.02 28 28 S 2984843 Methylobacterium sp. FF17 0.02 26 26 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 5 5 S 426117 Methylobacterium sp. 4-46 0.00 1 1 S 2894310 Methylobacterium sp. NMS14P 0.20 254 254 S 334852 Methylobacterium oryzae 0.03 35 35 S 269660 Methylobacterium brachiatum 0.01 12 12 S 2051553 Methylobacterium currus 0.01 11 11 S 270351 Methylobacterium aquaticum 0.01 10 0 S 31998 Methylobacterium radiotolerans 0.01 10 10 S1 426355 Methylobacterium radiotolerans JCM 2831 0.01 8 0 S 114616 Methylobacterium nodulans 0.01 8 8 S1 460265 Methylobacterium nodulans ORS 2060 0.00 6 6 S 2202828 Methylobacterium radiodurans 0.00 5 5 S 570505 Methylobacterium bullatum 0.00 2 2 S 2202827 Methylobacterium terrae 0.00 1 1 S 410 Methylobacterium organophilum 0.01 17 17 G 186650 Microvirga 0.00 1 0 G 2282523 Methylorubrum 0.00 1 1 S 408 Methylorubrum extorquens 0.25 318 0 F 82115 Rhizobiaceae 0.24 308 274 F1 227290 Rhizobium/Agrobacterium group 0.02 32 2 G 379 Rhizobium 0.02 29 0 S 384 Rhizobium leguminosarum 0.02 29 25 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 4 4 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 1 1 S 396 Rhizobium phaseoli 0.00 1 0 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 1 S 358 Agrobacterium tumefaciens 0.00 1 0 G 1525371 Neorhizobium 0.00 1 1 S 515361 Neorhizobium petrolearium 0.01 7 0 G 34019 Liberibacter 0.00 4 3 S 34021 Candidatus Liberibacter asiaticus 0.00 1 1 S1 1174529 Candidatus Liberibacter asiaticus str. gxpsy 0.00 3 0 S 556287 Candidatus Liberibacter solanacearum 0.00 3 3 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 28105 Sinorhizobium 0.00 1 1 S 382 Sinorhizobium meliloti 0.00 1 0 G 323620 Shinella 0.00 1 1 G1 2643062 unclassified Shinella 0.00 1 0 G 2661800 Georhizobium 0.00 1 1 S 2341112 Georhizobium profundi 0.02 26 0 O1 119042 Hyphomicrobiales incertae sedis 0.02 26 0 G 212791 Enhydrobacter 0.02 26 0 G1 2632691 unclassified Enhydrobacter 0.02 26 26 S 1894999 Enhydrobacter sp. 0.02 24 0 F 255475 Aurantimonadaceae 0.02 24 24 G 414371 Aureimonas 0.02 23 14 F 41294 Nitrobacteraceae 0.01 7 0 G 374 Bradyrhizobium 0.00 5 5 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 1 S 1325095 Bradyrhizobium guangzhouense 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 1325111 Bradyrhizobium sp. CCBAU 53338 0.00 1 1 G 1073 Rhodopseudomonas 0.00 1 0 G 1395974 Tardiphaga 0.00 1 0 G1 2631404 unclassified Tardiphaga 0.00 1 1 S 1404799 Tardiphaga sp. 42S5 0.01 11 0 F 2831106 Devosiaceae 0.01 8 1 G 46913 Devosia 0.01 7 7 G1 196773 unclassified Devosia 0.00 3 0 G 3064792 Mariluticola 0.00 3 3 S 2909283 Mariluticola halotolerans 0.00 5 2 F 335928 Xanthobacteraceae 0.00 1 0 G 6 Azorhizobium 0.00 1 0 S 7 Azorhizobium caulinodans 0.00 1 1 S1 438753 Azorhizobium caulinodans ORS 571 0.00 1 0 G 45402 Aquabacter 0.00 1 0 G1 2663263 unclassified Aquabacter 0.00 1 1 S 2820278 Aquabacter sp. L1I39 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.00 5 1 F 45404 Beijerinckiaceae 0.00 3 1 G 1156568 Methylovirgula 0.00 2 0 G1 2640612 unclassified Methylovirgula 0.00 2 2 S 2293567 Methylovirgula sp. 4M-Z18 0.00 1 0 G 120652 Methylocella 0.00 1 1 S 227605 Methylocella tundrae 0.00 5 0 F 45401 Hyphomicrobiaceae 0.00 3 0 G 1484898 Methyloceanibacter 0.00 3 0 G1 2617503 unclassified Methyloceanibacter 0.00 3 3 S 2170729 Methyloceanibacter sp. wino2 0.00 2 2 G 81 Hyphomicrobium 0.00 4 0 F 2813035 Parvibaculaceae 0.00 4 0 G 256616 Parvibaculum 0.00 4 0 S 256618 Parvibaculum lavamentivorans 0.00 4 4 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 3 0 F 118882 Brucellaceae 0.00 3 0 F1 2826938 Brucella/Ochrobactrum group 0.00 3 0 G 234 Brucella 0.00 3 0 S 29459 Brucella melitensis 0.00 3 0 S1 645169 Brucella melitensis bv. 2 0.00 3 3 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 3 0 F 69277 Phyllobacteriaceae 0.00 2 0 G 68287 Mesorhizobium 0.00 2 1 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2744519 Mesorhizobium sp. 131-2-5 0.00 1 0 G 2911176 Aquibium 0.00 1 1 S 675281 Aquibium microcysteis 0.00 1 0 F 2036754 Chelatococcaceae 0.00 1 1 G 28209 Chelatococcus 0.00 1 0 F 2821832 Stappiaceae 0.00 1 0 G 150830 Roseibium 0.00 1 0 G1 1936170 environmental samples 0.00 1 1 S 1936171 uncultured Roseibium sp. 0.00 1 0 F 2831100 Boseaceae 0.00 1 1 G 85413 Bosea 0.36 468 19 O 204457 Sphingomonadales 0.32 408 83 F 41297 Sphingomonadaceae 0.24 304 236 G 13687 Sphingomonas 0.02 27 3 G1 196159 unclassified Sphingomonas 0.01 11 11 S 2596913 Sphingomonas sp. NBWT7 0.01 7 7 S 2653203 Sphingomonas sp. CL5.1 0.00 2 2 S 3114300 Sphingomonas sp. M1-B02 0.00 2 2 S 2937788 Sphingomonas sp. SUN019 0.00 1 1 S 2937787 Sphingomonas sp. SUN039 0.00 1 1 S 3062169 Sphingomonas sp. C3-2 0.02 24 24 S 1541170 Sphingomonas morindae 0.00 6 6 S 13689 Sphingomonas paucimobilis 0.00 4 4 S 1813879 Sphingomonas panacisoli 0.00 3 3 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 S 1609977 Sphingomonas hengshuiensis 0.00 1 1 S 2681549 Sphingomonas profundi 0.00 1 1 S 2698679 Sphingomonas changnyeongensis 0.00 1 1 S 386874 Sphingomonas sediminicola 0.01 10 0 G 1234545 Parasphingopyxis 0.01 8 0 G1 2621071 unclassified Parasphingopyxis 0.01 8 8 S 2724527 Parasphingopyxis sp. CP4 0.00 2 2 S 2026624 Parasphingopyxis algicola 0.00 5 4 G 165695 Sphingobium 0.00 1 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 1144307 Sphingobium sp. AP49 0.00 2 1 G 165696 Novosphingobium 0.00 1 0 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 1609758 Novosphingobium sp. P6W 0.00 1 1 G 1227948 Sphingomicrobium 0.00 1 0 G 1434046 Sphingorhabdus 0.00 1 1 S 1913578 Sphingorhabdus lutea 0.00 1 0 G 2676781 Aquisediminimonas 0.00 1 1 S 1550733 Aquisediminimonas profunda 0.00 1 0 G 1763827 Hankyongella 0.00 1 1 S 1763828 Hankyongella ginsenosidimutans 0.02 30 0 F 2820280 Sphingosinicellaceae 0.02 27 0 G 335405 Sphingosinicella 0.02 25 25 S 335406 Sphingosinicella microcystinivorans 0.00 2 0 G1 2644549 unclassified Sphingosinicella 0.00 2 2 S 1892855 Sphingosinicella sp. BN140058 0.00 2 0 G 2883109 Sandaracinobacteroides 0.00 2 2 S 2759707 Sandaracinobacteroides saxicola 0.00 1 1 G 1508451 Polymorphobacter 0.01 11 1 F 335929 Erythrobacteraceae 0.00 4 4 G 2800681 Aurantiacibacter 0.00 3 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 2 0 G 1111 Porphyrobacter 0.00 2 0 G1 2683265 unclassified Porphyrobacter 0.00 2 2 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 1 0 G 1041 Erythrobacter 0.00 1 0 G1 2633097 unclassified Erythrobacter 0.00 1 1 S 1922225 Erythrobacter sp. Alg231-14 0.00 1 0 G 1295327 Croceicoccus 0.00 1 1 S 450378 Croceicoccus marinus 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 1 0 G 2800686 Tsuneonella 0.00 1 0 G1 2800703 unclassified Tsuneonella 0.00 1 1 S 3042152 Tsuneonella sp. CC-YZS046 0.23 293 0 O 204458 Caulobacterales 0.23 293 1 F 76892 Caulobacteraceae 0.22 285 11 G 41275 Brevundimonas 0.21 274 0 G1 2622653 unclassified Brevundimonas 0.21 273 273 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 3015999 Brevundimonas sp. NIBR11 0.00 4 0 G 75 Caulobacter 0.00 4 4 S 69666 Caulobacter mirabilis 0.00 2 0 G 20 Phenylobacterium 0.00 2 2 S 2201350 Phenylobacterium parvum 0.00 1 0 G 2768684 Terricaulis 0.00 1 1 S 2686094 Terricaulis silvestris 0.22 285 22 O 204455 Rhodobacterales 0.20 258 32 F 31989 Paracoccaceae 0.16 209 122 G 265 Paracoccus 0.06 79 79 S 1945662 Paracoccus contaminans 0.00 4 1 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 2 2 S 2589076 Paracoccus sp. AK26 0.00 1 1 S 3030011 Paracoccus sp. S3-43 0.00 3 0 S 34003 Paracoccus aminophilus 0.00 3 3 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 S 659350 Paracoccus stylophorae 0.00 6 0 G 366614 Haematobacter 0.00 6 6 S 195105 Haematobacter massiliensis 0.00 5 0 G 2831955 Pikeienuella 0.00 5 5 S 2748098 Pikeienuella piscinae 0.00 2 0 G 2816884 Qingshengfaniella 0.00 2 2 S 2599296 Qingshengfaniella alkalisoli 0.00 1 0 G 1060 Rhodobacter 0.00 1 1 S 1850250 Rhodobacter xanthinilyticus 0.00 1 0 G 1434002 Falsirhodobacter 0.00 1 1 S 2692330 Falsirhodobacter algicola 0.00 1 0 G 34008 Rhodovulum 0.00 1 0 G1 2631432 unclassified Rhodovulum 0.00 1 1 S 1564506 Rhodovulum sp. P5 0.00 1 0 G 285107 Thioclava 0.00 1 1 S 1549850 Thioclava electrotropha 0.00 5 4 F 2854170 Roseobacteraceae 0.00 1 0 G 60136 Sulfitobacter 0.00 1 1 S 83219 Sulfitobacter mediterraneus 0.02 23 2 O 766 Rickettsiales 0.01 13 0 F 942 Anaplasmataceae 0.01 9 0 G 2883098 Candidatus Mesenet 0.01 9 7 G1 3066220 unclassified Candidatus Mesenet 0.00 2 2 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.00 3 3 G 768 Anaplasma 0.00 1 0 G 943 Ehrlichia 0.00 1 1 G1 106178 canis group 0.01 7 0 F 775 Rickettsiaceae 0.01 7 0 F1 33988 Rickettsieae 0.00 5 0 G 780 Rickettsia 0.00 5 0 G1 114277 spotted fever group 0.00 4 0 S 781 Rickettsia conorii 0.00 4 4 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 1 S 35790 Rickettsia japonica 0.00 2 0 G 2601645 Candidatus Sneabacter 0.00 2 2 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 2716172 Candidatus Bandiella 0.00 1 1 S 2570586 Candidatus Bandiella numerosa 0.00 4 0 O 1921002 Holosporales 0.00 4 0 F 44746 Holosporaceae 0.00 2 0 G 2601651 Candidatus Nesciobacter 0.00 2 2 S 2601668 Candidatus Nesciobacter abundans 0.00 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 3 2 O 54526 Candidatus Pelagibacterales 0.00 1 0 O1 2813274 Candidatus Pelagibacterales incertae sedis 0.00 1 0 G 2045213 Candidatus Fonsibacter 0.00 1 1 S 1925548 Candidatus Fonsibacter ubiquis 0.00 3 0 O 2800059 Maricaulales 0.00 3 0 F 2800061 Maricaulaceae 0.00 3 0 G 74317 Maricaulis 0.00 3 3 S 74318 Maricaulis maris 20.79 26730 751 C 1236 Gammaproteobacteria 12.97 16674 0 O 135614 Lysobacterales 12.96 16668 11 F 32033 Lysobacteraceae 12.90 16590 1 G 338 Xanthomonas 12.90 16589 16589 S 29447 Xanthomonas albilineans 0.03 34 30 G 40323 Stenotrophomonas 0.00 3 0 G1 995085 Stenotrophomonas maltophilia group 0.00 2 0 G2 2961925 unclassified Stenotrophomonas maltophilia group 0.00 2 2 S 2072414 Stenotrophomonas sp. ESTM1D_MKCIP4_1 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 1 1 S 128780 Stenotrophomonas acidaminiphila 0.02 29 1 G 68 Lysobacter 0.02 25 25 S 1324796 Lysobacter lycopersici 0.00 3 0 G1 2635362 unclassified Lysobacter 0.00 3 3 S 2762611 Lysobacter sp. CW239 0.00 3 2 G 83618 Pseudoxanthomonas 0.00 1 1 S 266062 Pseudoxanthomonas daejeonensis 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.00 6 4 F 1775411 Rhodanobacteraceae 0.00 1 1 G 231454 Dyella 0.00 1 0 G 242605 Luteibacter 0.00 1 1 S 2911539 Luteibacter aegosomatissinici 3.90 5014 319 O 91347 Enterobacterales 2.82 3626 512 F 543 Enterobacteriaceae 1.05 1354 19 G 561 Escherichia 1.02 1312 1199 S 562 Escherichia coli 0.03 34 34 S1 1322345 Escherichia coli ATCC 25922 0.02 20 20 S1 2079157 Escherichia coli O2:H1 0.01 18 18 S1 331112 Escherichia coli HS 0.01 10 10 S1 2874053 Escherichia coli O25:H1 0.01 9 0 S1 83334 Escherichia coli O157:H7 0.01 8 8 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 1 S2 1328859 Escherichia coli O157:H7 str. SS17 0.01 9 9 S1 316435 Escherichia coli Nissle 1917 0.01 8 8 S1 1446600 Escherichia coli O15:H18 0.00 2 2 S1 655817 Escherichia coli ABU 83972 0.00 2 2 S1 439855 Escherichia coli SMS-3-5 0.00 1 1 S1 362663 Escherichia coli 536 0.01 15 15 S 208962 Escherichia albertii 0.00 6 6 S 1499973 Escherichia marmotae 0.00 1 1 S 564 Escherichia fergusonii 0.00 1 0 G1 2608889 unclassified Escherichia 0.00 1 1 S 2044467 Escherichia sp. E4742 0.37 482 0 G 547 Enterobacter 0.37 472 2 G1 354276 Enterobacter cloacae complex 0.31 396 396 S 299767 Enterobacter ludwigii 0.05 60 60 S 158836 Enterobacter hormaechei 0.01 7 7 S 208224 Enterobacter kobei 0.00 5 4 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 2 2 S 1812935 Enterobacter roggenkampii 0.01 10 10 S 881260 Enterobacter bugandensis 0.32 411 9 G 590 Salmonella 0.31 396 35 S 28901 Salmonella enterica 0.28 361 19 S1 59201 Salmonella enterica subsp. enterica 0.07 85 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.04 51 51 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.03 34 34 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.05 67 67 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.05 60 60 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.03 43 43 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.02 30 8 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.01 11 11 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 11 11 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.01 18 17 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.01 11 11 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 6 6 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 4 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 4 4 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 4 3 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 1 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.00 3 3 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 3 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 3 3 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 2 2 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 2 2 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 1 1 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 6 0 S 54736 Salmonella bongori 0.00 4 4 S1 1299282 Salmonella bongori CFSAN000510 0.00 2 2 S1 2577118 Salmonella bongori serovar 48:z81:- 0.31 394 0 F1 2890311 Klebsiella/Raoultella group 0.30 391 9 G 570 Klebsiella 0.22 277 231 S 573 Klebsiella pneumoniae 0.03 42 42 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 4 4 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.06 74 74 S 548 Klebsiella aerogenes 0.01 18 6 S 1463165 Klebsiella quasipneumoniae 0.01 12 12 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 7 7 S 1134687 Klebsiella michiganensis 0.00 5 4 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S 571 Klebsiella oxytoca 0.00 3 0 G 160674 Raoultella 0.00 3 3 S 575 Raoultella planticola 0.18 237 222 F1 36866 unclassified Enterobacteriaceae 0.01 13 13 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 1 1 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.00 1 1 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.05 69 0 G 2815296 Jejubacter 0.05 69 69 S 2579935 Jejubacter calystegiae 0.03 37 0 G 620 Shigella 0.03 36 36 S 623 Shigella flexneri 0.00 1 1 S 622 Shigella dysenteriae 0.03 34 1 G 544 Citrobacter 0.02 23 1 G1 1344959 Citrobacter freundii complex 0.01 11 11 S 1639133 Citrobacter portucalensis 0.01 9 9 S 67828 Citrobacter gillenii 0.00 1 1 S 546 Citrobacter freundii 0.00 1 1 S 1748967 Citrobacter cronae 0.00 6 6 S 2971264 Citrobacter enshiensis 0.00 4 0 S 35703 Citrobacter amalonaticus 0.00 4 4 S1 1261127 Citrobacter amalonaticus Y19 0.02 29 0 G 1330547 Kosakonia 0.02 29 29 S 208223 Kosakonia cowanii 0.02 28 0 F1 191675 Enterobacteriaceae incertae sedis 0.02 28 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 10 0 F3 84564 ant endosymbionts 0.01 8 2 G 203804 Candidatus Blochmanniella 0.00 4 1 G1 711328 unclassified Candidatus Blochmanniella 0.00 2 2 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 1 0 S 251535 Candidatus Blochmanniella vafra 0.00 1 1 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.00 1 1 S 251538 Candidatus Blochmannia ocreatus 0.00 2 0 G 1699619 Candidatus Westeberhardia 0.00 2 2 S 1594731 Candidatus Westeberhardia cardiocondylae 0.01 7 0 F3 146507 aphid secondary symbionts 0.00 3 3 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 3 3 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 5 0 G 1302410 Candidatus Annandia 0.00 5 5 S 1302411 Candidatus Annandia adelgestsuga 0.00 2 0 G 1906659 Candidatus Hoaglandella 0.00 2 2 S 1778263 Candidatus Hoaglandella endobia 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1906660 Candidatus Mikella 0.00 1 1 S 1778264 Candidatus Mikella endobia 0.00 1 0 G 1906661 Candidatus Gullanella 0.00 1 1 S 1070130 Candidatus Gullanella endobia 0.01 16 0 G 1649298 Siccibacter 0.01 16 16 S 1505757 Siccibacter colletis 0.00 5 0 G 409304 Candidatus Ishikawella 0.00 5 0 S 168169 Candidatus Ishikawella capsulata 0.00 5 5 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 5 0 G 413496 Cronobacter 0.00 5 5 S 413503 Cronobacter malonaticus 0.00 2 0 G 2726810 Scandinavium 0.00 2 2 S 1851514 Scandinavium goeteborgense 0.00 2 0 G 1048757 Candidatus Moranella 0.00 2 2 S 1048758 Candidatus Moranella endobia 0.00 2 0 G 1081630 Candidatus Schneideria 0.00 2 2 S 1081631 Candidatus Schneideria nysicola 0.00 2 0 G 1903434 Atlantibacter 0.00 2 2 S 565 Atlantibacter hermannii 0.00 1 1 G 158483 Cedecea 0.00 1 0 G 1335483 Shimwellia 0.00 1 1 S 563 Shimwellia blattae 0.00 1 1 G 401618 Candidatus Riesia 0.00 1 0 G 2303321 Superficieibacter 0.00 1 0 G1 2645744 unclassified Superficieibacter 0.00 1 1 S 3031919 Superficieibacter sp. HKU1 0.00 1 0 G 1177214 Candidatus Profftia 0.00 1 0 G1 2735709 unclassified Candidatus Profftia 0.00 1 1 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.43 550 18 F 1903409 Erwiniaceae 0.37 480 0 G 551 Erwinia 0.37 477 477 S 1922217 Candidatus Erwinia haradaeae 0.00 3 0 G1 2622719 unclassified Erwinia 0.00 3 3 S 215689 Erwinia sp. Ejp617 0.03 43 32 G 53335 Pantoea 0.00 4 0 G1 1654067 Pantoea agglomerans group 0.00 4 4 S 549 Pantoea agglomerans 0.00 4 4 S 1235990 Candidatus Pantoea carbekii 0.00 2 2 S 553 Pantoea ananatis 0.00 1 1 S 470934 Pantoea vagans 0.01 9 0 G 32199 Buchnera 0.01 9 8 S 9 Buchnera aphidicola 0.00 1 1 S1 3075418 Buchnera aphidicola (Neophyllaphis varicolor) 0.16 209 0 F 2812006 Bruguierivoracaceae 0.16 209 0 G 84565 Sodalis 0.15 199 199 S 2697027 Sodalis ligni 0.01 7 0 S 1486991 Candidatus Sodalis pierantonius 0.01 7 7 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 3 0 G1 2636512 unclassified Sodalis 0.00 3 3 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.11 140 0 F 1903411 Yersiniaceae 0.08 107 1 G 613 Serratia 0.06 80 80 S 138074 Serratia symbiotica 0.01 9 9 S 614 Serratia liquefaciens 0.01 9 0 S 82996 Serratia plymuthica 0.01 9 9 S1 1006598 Serratia plymuthica RVH1 0.00 5 5 S 61652 Serratia rubidaea 0.00 2 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 2 2 S 2785630 Serratia sp. CMO1 0.00 1 1 S 615 Serratia marcescens 0.02 26 0 G 629 Yersinia 0.02 26 0 G1 1649845 Yersinia pseudotuberculosis complex 0.02 26 0 S 632 Yersinia pestis 0.02 22 22 S1 748678 Yersinia pestis str. Pestoides B 0.00 3 3 S1 649716 Yersinia pestis Pestoides G 0.00 1 1 S1 360102 Yersinia pestis Antiqua 0.00 6 6 G 1927833 Candidatus Fukatsuia 0.00 1 0 G 1565532 Rouxiella 0.00 1 1 S 1646377 Rouxiella badensis 0.08 107 2 F 1903414 Morganellaceae 0.04 52 5 G 637 Arsenophonus 0.03 36 0 G1 2627083 unclassified Arsenophonus 0.02 32 32 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 2 2 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 2 2 S 3041619 Arsenophonus sp. aPb 0.01 9 9 S 634113 Candidatus Arsenophonus lipoptenae 0.00 2 2 S 638 Arsenophonus nasoniae 0.01 19 0 G 581 Morganella 0.01 19 19 S 582 Morganella morganii 0.01 15 2 G 583 Proteus 0.01 12 12 S 584 Proteus mirabilis 0.00 1 0 S 1574161 Proteus terrae 0.00 1 1 S1 626774 Proteus terrae subsp. cibarius 0.01 11 1 G 626 Xenorhabdus 0.01 7 0 S 40577 Xenorhabdus poinarii 0.01 7 7 S1 1354304 Xenorhabdus poinarii G6 0.00 3 3 S 290110 Xenorhabdus budapestensis 0.00 4 0 G 586 Providencia 0.00 1 1 S 588 Providencia stuartii 0.00 1 0 S 516075 Providencia sneebia 0.00 1 1 S1 1141660 Providencia sneebia DSM 19967 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.00 1 0 G1 2633465 unclassified Providencia 0.00 1 1 S 2939731 Providencia sp. PROV188 0.00 4 4 G 29487 Photorhabdus 0.04 51 12 F 1903410 Pectobacteriaceae 0.02 25 13 G 122277 Pectobacterium 0.01 7 7 S 2488639 Pectobacterium versatile 0.00 4 4 S 1905730 Pectobacterium parmentieri 0.00 1 1 S 2485124 Pectobacterium polonicum 0.01 13 1 G 204037 Dickeya 0.01 10 10 S 1089444 Dickeya solani 0.00 1 1 S 204042 Dickeya zeae 0.00 1 1 S 1778540 Dickeya fangzhongdai 0.00 1 0 G 1082702 Lonsdalea 0.00 1 1 S 1172565 Lonsdalea populi 0.01 11 0 F 1903412 Hafniaceae 0.01 11 11 G 635 Edwardsiella 0.00 1 0 F 3120698 Gallaecimonadaceae 0.00 1 0 G 745410 Gallaecimonas 0.00 1 1 S 3029055 Gallaecimonas kandeliae 1.28 1646 1 O 72274 Pseudomonadales 1.28 1644 24 F 135621 Pseudomonadaceae 1.25 1601 1225 G 286 Pseudomonas 0.11 139 13 G1 196821 unclassified Pseudomonas 0.02 20 20 S 2931382 Pseudomonas sp. PIA16 0.01 16 16 S 2954092 Pseudomonas sp. FP2335 0.01 13 13 S 2954094 Pseudomonas sp. FP453 0.01 11 11 S 1649877 Pseudomonas sp. CCOS 191 0.01 10 10 S 2954080 Pseudomonas sp. FP1762 0.01 8 8 S 2762896 Pseudomonas sp. MPDS 0.01 7 7 S 2705472 Pseudomonas sp. MTM4 0.01 7 7 S 3137451 Pseudomonas sp. G.S.17 0.00 6 6 S 2954088 Pseudomonas sp. FP2262 0.00 6 6 S 2871095 Pseudomonas sp. DR48 0.00 4 4 S 2954078 Pseudomonas sp. FP1740 0.00 3 3 S 3139142 Pseudomonas sp. RC10 0.00 3 3 S 1500686 Pseudomonas sp. Os17 0.00 2 2 S 2895472 Pseudomonas sp. B21-012 0.00 1 1 S 2944392 Pseudomonas sp. BYT-5 0.00 1 1 S 2954086 Pseudomonas sp. FP2196 0.00 1 1 S 2025658 Pseudomonas sp. NS1(2017) 0.00 1 1 S 1837993 Pseudomonas sp. P108 0.00 1 1 S 2748080 Pseudomonas sp. ABC1 0.00 1 1 S 2895475 Pseudomonas sp. B21-019 0.00 1 1 S 2738843 Pseudomonas sp. B14-6 0.00 1 1 S 1611770 Pseudomonas sp. MRSN 12121 0.00 1 1 S 75692 Pseudomonas sp. 273 0.00 1 1 S 2559074 Pseudomonas sp. S150 0.04 51 1 G1 136841 Pseudomonas aeruginosa group 0.04 49 45 S 287 Pseudomonas aeruginosa 0.00 4 4 S1 381754 Pseudomonas aeruginosa PA7 0.00 1 1 S 300 Pseudomonas mendocina 0.03 44 44 S 2738125 Pseudomonas hefeiensis 0.03 41 0 G1 136845 Pseudomonas putida group 0.02 22 21 S 303 Pseudomonas putida 0.00 1 1 S1 1196325 Pseudomonas putida DOT-T1E 0.01 19 19 S 78327 Pseudomonas mosselii 0.03 40 3 G1 136843 Pseudomonas fluorescens group 0.01 15 4 S 47883 Pseudomonas synxantha 0.01 11 11 S1 96901 Pseudomonas synxantha BG33R 0.01 9 9 S 47878 Pseudomonas azotoformans 0.00 5 5 S 183795 Pseudomonas mediterranea 0.00 3 3 S 76758 Pseudomonas orientalis 0.00 3 3 S 200450 Pseudomonas trivialis 0.00 1 1 S 198620 Pseudomonas koreensis 0.00 1 1 S 294 Pseudomonas fluorescens 0.01 15 0 G1 136849 Pseudomonas syringae group 0.01 13 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.01 13 7 S 317 Pseudomonas syringae 0.00 5 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 5 5 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 1 1 S1 1357285 Pseudomonas syringae CC457 0.00 2 0 G2 251698 Pseudomonas syringae group genomosp. 2 0.00 2 2 S 47877 Pseudomonas amygdali 0.01 12 12 S 46677 Pseudomonas agarici 0.01 7 7 S 2599595 Pseudomonas eucalypticola 0.00 5 5 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 4 4 S 437900 Pseudomonas marincola 0.00 4 4 S 244566 Pseudomonas lurida 0.00 2 2 S 104087 Pseudomonas frederiksbergensis 0.00 2 2 S 2961893 Pseudomonas triclosanedens 0.00 2 2 S 2219225 Pseudomonas asiatica 0.00 2 2 S 158627 Pseudomonas graminis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 2853159 Pseudomonas pergaminensis 0.00 1 1 S 319939 Pseudomonas otitidis 0.00 1 1 S 157783 Pseudomonas cremoricolorata 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 380021 Pseudomonas protegens 0.00 1 1 S 930166 Pseudomonas brassicacearum 0.01 8 0 G 2901164 Stutzerimonas 0.01 8 0 G1 136846 Stutzerimonas stutzeri group 0.01 8 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 8 8 S 316 Stutzerimonas stutzeri 0.00 6 0 G 1654787 Thiopseudomonas 0.00 6 6 S 1697053 Thiopseudomonas alkaliphila 0.00 4 0 G 2901189 Halopseudomonas 0.00 4 4 S 797277 Halopseudomonas litoralis 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 F 2887365 Marinobacteraceae 0.00 1 1 G 2742 Marinobacter 0.88 1133 0 O 2887326 Moraxellales 0.88 1133 2 F 468 Moraxellaceae 0.83 1071 665 G 469 Acinetobacter 0.12 153 153 S 108981 Acinetobacter schindleri 0.11 137 2 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.08 109 109 S 470 Acinetobacter baumannii 0.01 18 10 S 48296 Acinetobacter pittii 0.01 8 8 S1 871585 Acinetobacter pittii PHEA-2 0.00 5 5 S 1530123 Acinetobacter seifertii 0.00 2 2 S 471 Acinetobacter calcoaceticus 0.00 1 1 S 106654 Acinetobacter nosocomialis 0.03 34 5 G1 196816 unclassified Acinetobacter 0.01 7 7 S 2929509 Acinetobacter sp. NyZ410 0.01 7 7 S 3151496 Acinetobacter sp. ANC 7955 0.00 6 6 S 3003393 Acinetobacter sp. TR11 0.00 3 3 S 2919376 Acinetobacter sp. AOR07_HL 0.00 3 3 S 2004644 Acinetobacter sp. WCHA45 0.00 2 2 S 1827285 Acinetobacter sp. MYb10 0.00 1 1 S 3151491 Acinetobacter sp. ANC 7914 0.01 17 17 S 40214 Acinetobacter johnsonii 0.01 17 17 S 487316 Acinetobacter soli 0.01 15 15 S 202956 Acinetobacter towneri 0.01 13 13 S 756892 Acinetobacter indicus 0.01 12 0 S 52133 Acinetobacter venetianus 0.01 12 12 S1 1197884 Acinetobacter venetianus VE-C3 0.00 2 2 S 1789224 Acinetobacter larvae 0.00 1 1 S 29430 Acinetobacter haemolyticus 0.00 1 1 S 2662362 Acinetobacter wanghuae 0.00 1 0 S 1148157 Acinetobacter oleivorans 0.00 1 1 S1 436717 Acinetobacter oleivorans DR1 0.00 1 1 S 280145 Acinetobacter colistiniresistens 0.00 1 1 S 108980 Acinetobacter ursingii 0.00 1 1 S 40215 Acinetobacter junii 0.04 52 32 G 475 Moraxella 0.01 11 11 S 2904120 Moraxella nasibovis 0.00 6 0 G1 2685852 unclassified Moraxella 0.00 6 6 S 2904123 Moraxella sp. ZY210820 0.00 1 1 S 90241 Moraxella lincolnii 0.00 1 1 S 386891 Moraxella bovoculi 0.00 1 1 S 2904121 Moraxella nasovis 0.00 6 2 G 497 Psychrobacter 0.00 4 2 G1 196806 unclassified Psychrobacter 0.00 2 2 S 1415574 Psychrobacter sp. LV10R520-6 0.00 2 0 G 2824158 Aquirhabdus 0.00 2 2 S 2283318 Aquirhabdus parva 0.41 529 0 O 135622 Alteromonadales 0.37 479 0 F 267888 Pseudoalteromonadaceae 0.37 471 0 G 2834759 Flocculibacter 0.37 471 471 S 2744479 Flocculibacter collagenilyticus 0.01 8 0 G 53246 Pseudoalteromonas 0.01 8 0 G1 194690 unclassified Pseudoalteromonas 0.01 8 8 S 649161 Pseudoalteromonas sp. 3J6 0.02 29 0 F 267890 Shewanellaceae 0.02 29 6 G 22 Shewanella 0.01 15 10 G1 196818 unclassified Shewanella 0.00 5 5 S 2590015 Shewanella sp. SNU WT4 0.00 3 3 S 62322 Shewanella baltica 0.00 2 2 S 2018305 Shewanella bicestrii 0.00 2 0 S 60961 Shewanella woodyi 0.00 2 2 S1 392500 Shewanella woodyi ATCC 51908 0.00 1 1 S 712036 Shewanella dokdonensis 0.01 17 2 F 72275 Alteromonadaceae 0.01 7 0 F1 2903219 Alteromonas/Salinimonas group 0.01 7 0 G 226 Alteromonas 0.00 6 0 G1 2614992 unclassified Alteromonas 0.00 6 6 S 2267264 Alteromonas sp. RKMC-009 0.00 1 1 S 314275 Alteromonas mediterranea 0.00 6 6 G 1172191 Catenovulum 0.00 1 1 G 1858563 Alkalimarinus 0.00 1 0 G 2650549 Hydrocarboniclastica 0.00 1 1 S 2259620 Hydrocarboniclastica marina 0.00 2 0 F 267891 Moritellaceae 0.00 2 0 G 58050 Moritella 0.00 2 0 S 90736 Moritella marina 0.00 2 2 S1 1202962 Moritella marina ATCC 15381 0.00 2 0 F 267892 Ferrimonadaceae 0.00 2 2 G 44011 Ferrimonas 0.27 348 0 O 135623 Vibrionales 0.27 348 41 F 641 Vibrionaceae 0.21 275 134 G 662 Vibrio 0.06 82 0 S 52443 Vibrio tapetis 0.06 82 82 S1 1671868 Vibrio tapetis subsp. tapetis 0.02 24 24 S 666 Vibrio cholerae 0.01 14 2 G1 2614977 unclassified Vibrio 0.01 8 8 S 2661921 Vibrio sp. THAF191c 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2751179 Vibrio sp. B1REV9 0.00 1 1 S 2819099 Vibrio sp. SCSIO 43155 0.01 14 14 S 2572923 Vibrio taketomensis 0.00 4 0 G1 717610 Vibrio harveyi group 0.00 2 2 S 669 Vibrio harveyi 0.00 2 1 S 670 Vibrio parahaemolyticus 0.00 1 1 S1 745023 Vibrio parahaemolyticus 10329 0.00 1 0 S 672 Vibrio vulnificus 0.00 1 1 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 1 S 104609 Vibrio penaeicida 0.00 1 0 G1 87806 environmental samples 0.00 1 1 S 114054 uncultured Vibrio sp. 0.02 30 5 G 657 Photobacterium 0.02 24 13 S 553611 Photobacterium leiognathi 0.01 11 11 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 1 0 S 38293 Photobacterium damselae 0.00 1 1 S1 38294 Photobacterium damselae subsp. piscicida 0.00 2 0 G 511678 Aliivibrio 0.00 2 0 S 40269 Aliivibrio salmonicida 0.00 2 2 S1 316275 Aliivibrio salmonicida LFI1238 0.09 122 0 O 135624 Aeromonadales 0.09 122 12 F 84642 Aeromonadaceae 0.06 82 19 G 642 Aeromonas 0.03 34 34 S 654 Aeromonas veronii 0.02 24 24 S 650 Aeromonas jandaei 0.00 3 3 S 652 Aeromonas schubertii 0.00 2 2 S 648 Aeromonas caviae 0.01 17 0 G 225143 Oceanisphaera 0.01 17 17 S 1903694 Oceanisphaera avium 0.01 9 1 G 43947 Tolumonas 0.01 8 0 G1 263764 environmental samples 0.01 8 8 S 263765 uncultured Tolumonas sp. 0.00 1 0 G 347533 Zobellella 0.00 1 1 S 347534 Zobellella denitrificans 0.00 1 0 G 2802288 Dongshaea 0.00 1 1 S 2047966 Dongshaea marina 0.09 117 0 O 135625 Pasteurellales 0.09 117 7 F 712 Pasteurellaceae 0.07 89 19 G 724 Haemophilus 0.04 51 51 S 729 Haemophilus parainfluenzae 0.01 14 14 S 727 Haemophilus influenzae 0.00 3 3 S 735 Haemophilus parahaemolyticus 0.00 2 2 S 726 Haemophilus haemolyticus 0.01 14 1 G 713 Actinobacillus 0.01 9 0 S 718 Actinobacillus equuli 0.01 9 9 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 3 3 S 157339 Actinobacillus arthritidis 0.00 1 0 S 715 Actinobacillus pleuropneumoniae 0.00 1 0 S1 434270 Actinobacillus pleuropneumoniae serovar 3 0.00 1 1 S2 434271 Actinobacillus pleuropneumoniae serovar 3 str. JL03 0.00 4 0 G 745 Pasteurella 0.00 4 3 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.00 1 0 G 2094023 Glaesserella 0.00 1 0 G1 2629322 unclassified Glaesserella 0.00 1 1 S 2030797 Glaesserella sp. 15-184 0.00 1 0 G 1960084 Rodentibacter 0.00 1 1 S 2778911 Rodentibacter haemolyticus 0.00 1 0 G 292486 Avibacterium 0.00 1 1 S 728 Avibacterium paragallinarum 0.06 78 0 O 135615 Cardiobacteriales 0.06 76 0 F 868 Cardiobacteriaceae 0.04 55 0 G 13275 Suttonella 0.04 55 0 G1 2908647 unclassified Suttonella 0.04 55 55 S 2908648 Suttonella sp. R2A3 0.01 17 0 G 2717 Cardiobacterium 0.01 15 0 G1 2648856 unclassified Cardiobacterium 0.01 15 15 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 2 2 S 2718 Cardiobacterium hominis 0.00 4 0 G 869 Dichelobacter 0.00 4 4 S 870 Dichelobacter nodosus 0.00 2 0 F 3018589 Ignatzschineriaceae 0.00 2 2 G 112008 Ignatzschineria 0.05 65 0 O 1240482 Orbales 0.05 65 0 F 1240483 Orbaceae 0.05 65 0 G 2894762 Zophobihabitans 0.05 65 65 S 1635327 Zophobihabitans entericus 0.04 49 1 O 72273 Thiotrichales 0.02 30 0 F 135617 Thiotrichaceae 0.02 27 0 G 1021 Beggiatoa 0.02 27 27 S 288004 Beggiatoa leptomitoformis 0.00 3 2 G 1030 Thiothrix 0.00 1 1 S 525917 Thiothrix lacustris 0.01 10 0 F 135616 Piscirickettsiaceae 0.00 5 4 G 933 Thiomicrospira 0.00 1 0 G1 2643099 unclassified Thiomicrospira 0.00 1 1 S 3035472 Thiomicrospira sp. R3 0.00 3 3 G 34067 Cycloclasticus 0.00 1 0 G 28884 Hydrogenovibrio 0.00 1 1 S 28885 Hydrogenovibrio marinus 0.00 1 0 G 2781121 Thiosulfatimonas 0.00 1 1 S 2675054 Thiosulfatimonas sediminis 0.00 4 0 F 34064 Francisellaceae 0.00 4 4 G 262 Francisella 0.00 4 0 F 2056687 Fastidiosibacteraceae 0.00 4 0 G 2056696 Cysteiniphilum 0.00 4 0 G1 2610889 unclassified Cysteiniphilum 0.00 4 4 S 2975055 Cysteiniphilum sp. QT6929 0.04 49 2 O 135619 Oceanospirillales 0.02 29 0 F 135620 Oceanospirillaceae 0.01 14 0 G 267849 Nitrincola 0.01 14 14 S 2614693 Nitrincola iocasae 0.01 7 0 G 459520 Neptuniibacter 0.01 7 7 S 651666 Neptuniibacter halophilus 0.00 6 2 G 28253 Marinomonas 0.00 4 4 S 2773454 Marinomonas algicola 0.00 2 0 G 48075 Marinobacterium 0.00 2 0 G1 2644139 unclassified Marinobacterium 0.00 2 2 S 2668067 Marinobacterium sp. LSUCC0821 0.01 9 0 F 28256 Halomonadaceae 0.00 6 0 G 2745 Halomonas 0.00 4 4 S 3031727 Halomonas piscis 0.00 1 1 S 475662 Halomonas beimenensis 0.00 1 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2982692 Halomonas sp. M4R1S46 0.00 3 0 F1 114403 Zymobacter group 0.00 2 0 G 114185 Candidatus Carsonella 0.00 2 2 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 235572 Candidatus Portiera 0.00 1 1 S 91844 Candidatus Portiera aleyrodidarum 0.00 5 0 F 255527 Saccharospirillaceae 0.00 4 0 G 230494 Reinekea 0.00 4 4 S 1336806 Reinekea forsetii 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.00 2 0 F 2823145 Pleioneaceae 0.00 2 0 G 1502941 Pleionea 0.00 2 2 S 3070815 Pleionea litopenaei 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.03 43 0 O 135618 Methylococcales 0.03 43 2 F 403 Methylococcaceae 0.02 31 0 G 39773 Methylomicrobium 0.02 31 0 S 39775 Methylomicrobium album 0.02 31 31 S1 686340 Methylomicrobium album BG8 0.00 5 0 G 1295378 Methylogaea 0.00 5 5 S 1295382 Methylogaea oryzae 0.00 2 0 G 1808977 Candidatus Methylospira 0.00 2 2 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 G 413 Methylococcus 0.00 1 1 S 414 Methylococcus capsulatus 0.00 1 0 G 416 Methylomonas 0.00 1 0 G1 2608980 unclassified Methylomonas 0.00 1 1 S 2785785 Methylomonas sp. LL1 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.03 43 0 O 135613 Chromatiales 0.03 39 1 F 1046 Chromatiaceae 0.01 9 9 G 1056 Thiocapsa 0.01 9 0 G 2828366 Caldichromatium 0.01 9 9 S 2699430 Caldichromatium japonicum 0.01 8 0 G 156885 Thioflavicoccus 0.01 8 0 S 80679 Thioflavicoccus mobilis 0.01 8 8 S1 765912 Thioflavicoccus mobilis 8321 0.00 4 4 G 1227 Nitrosococcus 0.00 3 2 G 2796146 Candidatus Nitrosacidococcus 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 2 0 G 85072 Allochromatium 0.00 2 2 S 553982 Allochromatium tepidum 0.00 1 1 G 61593 Thiorhodovibrio 0.00 1 0 G 67575 Rheinheimera 0.00 1 0 G1 115860 unclassified Rheinheimera 0.00 1 1 S 3072790 Rheinheimera sp. MMS21-TC3 0.00 1 0 G 85073 Thermochromatium 0.00 1 0 S 1050 Thermochromatium tepidum 0.00 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 3 0 F 72276 Ectothiorhodospiraceae 0.00 2 0 G 1335745 Spiribacter 0.00 2 2 S 2182432 Spiribacter halobius 0.00 1 1 G 106633 Thioalkalivibrio 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 1913444 Candidatus Thiodiazotropha 0.00 1 1 S 3065865 Candidatus Thiodiazotropha sp. CDECU1 0.01 15 0 O 118969 Legionellales 0.01 11 3 F 118968 Coxiellaceae 0.00 4 0 G 254245 Aquicella 0.00 4 4 S 254247 Aquicella siphonis 0.00 2 0 G 776 Coxiella 0.00 1 1 S 777 Coxiella burnetii 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 1 1 G 59195 Rickettsiella 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.00 4 0 F 444 Legionellaceae 0.00 4 0 G 445 Legionella 0.00 3 0 S 446 Legionella pneumophila 0.00 3 2 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 1 1 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 1 0 S 29423 Legionella oakridgensis 0.00 1 1 S1 1268635 Legionella oakridgensis ATCC 33761 = DSM 21215 0.01 14 0 O 3084968 Thiohalomonadales 0.01 14 0 F 3084969 Thiohalomonadaceae 0.01 14 0 G 2034504 Sulfurivermis 0.01 14 14 S 1972068 Sulfurivermis fontis 0.01 13 0 C1 118884 Gammaproteobacteria incertae sedis 0.01 12 0 G 1076625 Candidatus Steffania 0.01 12 12 S 1076626 Candidatus Steffania adelgidicola 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.01 11 0 O 1706369 Cellvibrionales 0.00 5 0 F 1706371 Cellvibrionaceae 0.00 3 0 G 10 Cellvibrio 0.00 3 0 G1 2624793 unclassified Cellvibrio 0.00 3 3 S 1987723 Cellvibrio sp. PSBB006 0.00 2 0 G 447467 Simiduia 0.00 2 0 G1 2639280 unclassified Simiduia 0.00 2 2 S 2909669 Simiduia sp. 21SJ11W-1 0.00 3 0 F 1706373 Microbulbiferaceae 0.00 3 1 G 48073 Microbulbifer 0.00 2 2 S 86173 Microbulbifer elongatus 0.00 2 1 F 1706372 Halieaceae 0.00 1 0 G 1217416 Halioglobus 0.00 1 1 S 930805 Halioglobus japonicus 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.01 9 0 O 2975284 Candidatus Comchoanobacterales 0.01 9 0 F 2975285 Candidatus Comchoanobacteraceae 0.01 9 0 G 2975286 Candidatus Comchoanobacter 0.01 9 9 S 2919598 Candidatus Comchoanobacter bicostacola 0.00 4 0 O 1775403 Nevskiales 0.00 4 3 F 568386 Nevskiaceae 0.00 1 0 G 413435 Solimonas 0.00 1 0 G1 2637139 unclassified Solimonas 0.00 1 1 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 O 1934945 Immundisolibacterales 0.00 1 0 F 1934946 Immundisolibacteraceae 0.00 1 0 G 1934947 Immundisolibacter 0.00 1 1 S 1810504 Immundisolibacter cernigliae 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 0 G 261963 Kangiella 0.00 1 1 S 1144748 Kangiella sediminilitoris 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 0 F 1692041 Acidiferrobacteraceae 0.00 1 0 G 1744881 Sulfuricaulis 0.00 1 1 S 1620215 Sulfuricaulis limicola 5.48 7044 105 C 28216 Betaproteobacteria 4.82 6198 66 O 80840 Burkholderiales 4.01 5155 280 F 75682 Oxalobacteraceae 2.36 3036 51 G 401469 Undibacterium 2.31 2975 655 G1 2630295 unclassified Undibacterium 1.80 2320 2320 S 3048609 Undibacterium sp. CCC3.4 0.01 9 9 S 401471 Undibacterium parvum 0.00 1 1 S 3073561 Undibacterium cyanobacteriorum 0.87 1121 1044 G 29580 Janthinobacterium 0.06 74 0 G1 2610881 unclassified Janthinobacterium 0.05 63 63 S 3065910 Janthinobacterium sp. J1-1 0.01 10 10 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 1938606 Janthinobacterium sp. LM6 0.00 3 3 S 2590869 Janthinobacterium tructae 0.49 629 56 F1 2895353 Telluria group 0.44 561 62 G 149698 Massilia 0.21 266 266 S 457921 Massilia varians 0.12 149 149 S 1141883 Massilia putida 0.03 35 1 G1 2609279 unclassified Massilia 0.01 17 17 S 1707785 Massilia sp. WG5 0.01 10 10 S 3126507 Massilia sp. W12 0.00 3 3 S 2709303 Massilia sp. Se16.2.3 0.00 3 3 S 2970464 Massilia sp. H6 0.00 1 1 S 3064278 Massilia sp. R2A-15 0.02 31 31 S 945844 Massilia oculi 0.01 15 15 S 2728020 Massilia forsythiae 0.00 1 1 S 2045208 Massilia violaceinigra 0.00 1 1 S 2769491 Massilia litorea 0.00 1 1 S 2899220 Massilia endophytica 0.01 8 1 G 1522432 Pseudoduganella 0.00 6 0 G1 2637179 unclassified Pseudoduganella 0.00 6 6 S 2995154 Pseudoduganella sp. SL102 0.00 1 1 S 2660641 Pseudoduganella aquatica 0.00 3 0 G 75654 Duganella 0.00 2 2 S 2728021 Duganella dendranthematis 0.00 1 1 S 75659 Duganella zoogloeoides 0.00 1 0 G 34069 Telluria 0.00 1 1 S 34071 Telluria mixta 0.04 56 0 G 884214 Candidatus Zinderia 0.04 56 0 G1 3077950 unclassified Candidatus Zinderia 0.04 56 56 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.01 13 0 G 1344552 Noviherbaspirillum 0.01 13 0 G1 2617509 unclassified Noviherbaspirillum 0.01 13 13 S 2601898 Noviherbaspirillum sp. UKPF54 0.01 9 0 G 1229970 Glaciimonas 0.01 9 0 G1 2644401 unclassified Glaciimonas 0.01 9 9 S 2807626 Glaciimonas sp. PAMC28666 0.01 7 0 G 1051898 Actimicrobium 0.01 7 0 G1 2624959 unclassified Actimicrobium 0.01 7 7 S 3048606 Actimicrobium sp. CCC2.4 0.00 4 3 G 963 Herbaspirillum 0.00 1 0 S 341045 Herbaspirillum hiltneri 0.00 1 1 S1 1262470 Herbaspirillum hiltneri N3 0.40 511 25 F 80864 Comamonadaceae 0.27 346 346 G 80865 Delftia 0.07 85 82 G 34072 Variovorax 0.00 3 3 G1 663243 unclassified Variovorax 0.01 16 16 G 28065 Rhodoferax 0.01 10 7 G 238749 Diaphorobacter 0.00 3 0 G1 2649760 unclassified Diaphorobacter 0.00 3 3 S 2714925 Diaphorobacter sp. HDW4B 0.01 8 1 G 283 Comamonas 0.00 4 4 S 2743470 Comamonas antarctica 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 1 1 S 225991 Comamonas aquatica 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2918299 Comamonas sp. B21-038 0.01 7 0 G 3051137 Paracidovorax 0.01 7 7 S 80867 Paracidovorax avenae 0.00 6 0 G 1436289 Candidatus Symbiobacter 0.00 6 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 6 6 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 3 0 G 201096 Alicycliphilus 0.00 3 3 S 179636 Alicycliphilus denitrificans 0.00 2 0 G 232523 Hylemonella 0.00 2 2 S 80880 Hylemonella gracilis 0.00 2 0 G 52972 Polaromonas 0.00 2 2 S 37448 Polaromonas vacuolata 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.27 347 4 F 119060 Burkholderiaceae 0.11 147 0 G 48736 Ralstonia 0.11 146 0 G1 3116862 Ralstonia solanacearum species complex 0.11 146 146 S 305 Ralstonia solanacearum 0.00 1 1 S 105219 Ralstonia mannitolilytica 0.08 99 2 G 32008 Burkholderia 0.06 76 1 G1 87882 Burkholderia cepacia complex 0.05 63 55 S 152500 Burkholderia dolosa 0.01 8 8 S1 1385930 Burkholderia dolosa PC543 0.00 4 4 S 95485 Burkholderia stabilis 0.00 3 3 S 87883 Burkholderia multivorans 0.00 2 2 S 292 Burkholderia cepacia 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 0 S 95486 Burkholderia cenocepacia 0.00 1 1 S1 1055524 Burkholderia cenocepacia H111 0.00 1 1 S 482957 Burkholderia lata 0.02 21 0 G1 111527 pseudomallei group 0.01 19 2 S 28450 Burkholderia pseudomallei 0.01 17 17 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 2 0 S 57975 Burkholderia thailandensis 0.00 2 2 S1 1249664 Burkholderia thailandensis 34 0.04 46 1 G 44013 Polynucleobacter 0.03 43 43 S 576610 Polynucleobacter necessarius 0.00 2 2 S 556054 Polynucleobacter difficilis 0.03 35 0 G 47670 Lautropia 0.03 35 35 S 47671 Lautropia mirabilis 0.01 8 0 G 106589 Cupriavidus 0.00 5 5 S 367825 Cupriavidus malaysiensis 0.00 2 0 S 106590 Cupriavidus necator 0.00 2 2 S1 1042878 Cupriavidus necator N-1 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.00 5 0 G 2038280 Robbsia 0.00 4 0 G1 2636574 unclassified Robbsia 0.00 4 4 S 3149231 Robbsia sp. KACC 23696 0.00 1 1 S 28092 Robbsia andropogonis 0.00 3 0 G 1822464 Paraburkholderia 0.00 2 2 S 2571748 Paraburkholderia acidisoli 0.00 1 0 S 75105 Paraburkholderia caribensis 0.00 1 1 S1 1323664 Paraburkholderia caribensis MBA4 0.07 85 4 F 995019 Sutterellaceae 0.05 63 0 G 1980697 Duodenibacillus 0.05 63 63 S 1852381 Duodenibacillus massiliensis 0.01 17 2 G 40544 Sutterella 0.01 13 13 S 40545 Sutterella wadsworthensis 0.00 2 2 S 2494234 Sutterella megalosphaeroides 0.00 1 0 G 1918598 Turicimonas 0.00 1 1 S 1796652 Turicimonas muris 0.01 15 2 F 506 Alcaligenaceae 0.00 3 0 G 1472344 Basilea 0.00 3 0 S 1472345 Basilea psittacipulmonis 0.00 3 3 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 3 0 G 290425 Advenella 0.00 3 3 S 1481665 Advenella alkanexedens 0.00 2 0 G 222 Achromobacter 0.00 1 1 S 217204 Achromobacter insolitus 0.00 1 1 S 1353889 Achromobacter pestifer 0.00 2 2 G 517 Bordetella 0.00 2 0 G 305976 Pusillimonas 0.00 2 0 G1 2640016 unclassified Pusillimonas 0.00 2 2 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 1 0 G 1100891 Paenalcaligenes 0.00 1 1 S 2980099 Paenalcaligenes faecalis 0.01 12 0 O1 224471 Burkholderiales genera incertae sedis 0.01 8 0 G 92793 Aquabacterium 0.01 7 7 S 1296669 Aquabacterium olei 0.00 1 0 G1 2620789 unclassified Aquabacterium 0.00 1 1 S 2898431 Aquabacterium sp. J223 0.00 4 3 G 32012 Thiomonas 0.00 1 1 S 926 Thiomonas intermedia 0.01 7 1 F 2975441 Sphaerotilaceae 0.00 3 0 G 34102 Sphaerotilus 0.00 2 2 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 S 2914710 Sphaerotilus microaerophilus 0.00 2 2 G 93681 Roseateles 0.00 1 0 G 1114981 Piscinibacter 0.00 1 1 S 946333 Piscinibacter gummiphilus 0.50 637 6 O 206351 Neisseriales 0.46 585 52 F 481 Neisseriaceae 0.40 508 373 G 482 Neisseria 0.03 42 42 S 485 Neisseria gonorrhoeae 0.02 32 28 S 487 Neisseria meningitidis 0.00 4 4 S1 942513 Neisseria meningitidis WUE 2594 0.02 25 0 G1 2623750 unclassified Neisseria 0.02 22 0 S 641148 Neisseria sp. oral taxon 014 0.02 22 22 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.00 2 2 S 655307 Neisseria sp. KEM232 0.00 1 1 S 2972775 Neisseria sp. Marseille-Q5346 0.01 14 14 S 607712 Neisseria shayeganii 0.01 9 9 S 495 Neisseria elongata 0.01 8 8 S 28449 Neisseria subflava 0.00 2 2 S 1853278 Neisseria chenwenguii 0.00 1 1 S 1470200 Neisseria arctica 0.00 1 1 S 1815583 Neisseria musculi 0.00 1 1 S 1853276 Neisseria weixii 0.01 11 0 G 2593687 Aquella 0.01 11 11 S 2067065 Aquella oligotrophica 0.00 6 0 G 538 Eikenella 0.00 6 6 S 539 Eikenella corrodens 0.00 2 0 G 32257 Kingella 0.00 2 2 S 1522312 Kingella negevensis 0.00 2 0 G 334107 Conchiformibius 0.00 2 2 S 153493 Conchiformibius steedae 0.00 2 0 G 1193515 Snodgrassella 0.00 2 2 S 2946699 Snodgrassella communis 0.00 1 1 G 59 Vitreoscilla 0.00 1 0 G 299568 Uruburuella 0.00 1 1 S 252130 Uruburuella suis 0.02 31 0 F 2897176 Aquaspirillaceae 0.02 25 0 G 57479 Microvirgula 0.02 25 25 S 57480 Microvirgula aerodenitrificans 0.00 6 0 G 168470 Laribacter 0.00 6 6 S 168471 Laribacter hongkongensis 0.01 10 1 F 1499392 Chromobacteriaceae 0.01 9 0 G 57739 Vogesella 0.01 9 0 G1 2684990 unclassified Vogesella 0.01 9 9 S 1192162 Vogesella sp. LIG4 0.00 5 2 F 2897177 Chitinibacteraceae 0.00 2 0 G 240411 Chitinimonas 0.00 1 1 S 356302 Chitinimonas koreensis 0.00 1 1 S 2594795 Chitinimonas arctica 0.00 1 0 G 885864 Jeongeupia 0.00 1 0 G1 2619593 unclassified Jeongeupia 0.00 1 1 S 1009682 Jeongeupia sp. HS-3 0.05 69 16 O 32003 Nitrosomonadales 0.01 16 0 F 2008793 Sterolibacteriaceae 0.01 7 0 G 3050898 Sulfuricystis 0.00 6 6 S 2496847 Sulfuricystis thermophila 0.00 1 1 S 2211108 Sulfuricystis multivorans 0.00 6 0 G 311181 Denitratisoma 0.00 6 6 S 311182 Denitratisoma oestradiolicum 0.00 2 0 G 157591 Sterolibacterium 0.00 2 2 S 157592 Sterolibacterium denitrificans 0.00 1 0 G 1914449 Rugosibacter 0.00 1 1 S 1565605 Rugosibacter aromaticivorans 0.01 15 9 F 206379 Nitrosomonadaceae 0.00 6 1 G 914 Nitrosomonas 0.00 5 5 S 44577 Nitrosomonas ureae 0.01 13 2 F 90627 Gallionellaceae 0.01 10 0 G 2249462 Ferrigenium 0.01 10 10 S 1682490 Ferrigenium kumadai 0.00 1 1 G 453161 Candidatus Nitrotoga 0.00 4 0 F 32011 Methylophilaceae 0.00 2 1 G 1679002 Candidatus Methylopumilus 0.00 1 1 S 1581680 Candidatus Methylopumilus turicensis 0.00 1 0 G 16 Methylophilus 0.00 1 1 S 17 Methylophilus methylotrophus 0.00 1 0 G 404 Methylobacillus 0.00 1 0 S 405 Methylobacillus flagellatus 0.00 1 1 S1 265072 Methylobacillus flagellatus KT 0.00 4 0 F 2008790 Thiobacillaceae 0.00 3 0 G 1938335 Sulfuritortus 0.00 3 3 S 1914471 Sulfuritortus calidifontis 0.00 1 0 G 919 Thiobacillus 0.00 1 0 G1 2646513 unclassified Thiobacillus 0.00 1 1 S 924 Thiobacillus sp. 0.00 1 0 F 2772226 Sulfuricellaceae 0.00 1 1 G 1778653 Sulfuriferula 0.02 22 0 O 206389 Rhodocyclales 0.01 10 0 F 2008794 Zoogloeaceae 0.01 10 0 G 2891294 Nitrogeniibacter 0.01 10 10 S 2016596 Nitrogeniibacter mangrovi 0.00 6 0 F 75787 Rhodocyclaceae 0.00 3 0 G 1911577 Oryzomicrobium 0.00 3 3 S 1735038 Oryzomicrobium terrae 0.00 2 0 G 146937 Azospira 0.00 1 1 S 404405 Azospira restricta 0.00 1 1 S 2785627 Azospira inquinata 0.00 1 0 G 83766 Propionivibrio 0.00 1 0 G1 334579 environmental samples 0.00 1 1 S 426737 uncultured Propionivibrio sp. 0.00 6 0 F 2008795 Azonexaceae 0.00 6 0 G 88875 Ferribacterium 0.00 6 6 S 76259 Ferribacterium limneticum 0.01 13 0 C1 119066 Betaproteobacteria incertae sedis 0.01 7 5 G 1381133 Candidatus Profftella 0.00 2 2 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.00 5 0 G 1301080 Candidatus Nasuia 0.00 5 5 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 G 33055 Candidatus Kinetoplastibacterium 0.00 1 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.00 1 1 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 0.01 9 0 C 1807140 Acidithiobacillia 0.01 9 0 O 225057 Acidithiobacillales 0.01 9 0 F 225058 Acidithiobacillaceae 0.01 9 9 G 119977 Acidithiobacillus 22.11 28430 2654 D1 1783272 Terrabacteria group 10.84 13933 91 P 1239 Bacillota 8.20 10546 101 C 91061 Bacilli 4.73 6077 33 O 186826 Lactobacillales 2.08 2671 2 F 1300 Streptococcaceae 2.01 2578 1398 G 1301 Streptococcus 0.52 668 624 S 1308 Streptococcus thermophilus 0.03 36 36 S1 767463 Streptococcus thermophilus ND03 0.01 8 8 S1 322159 Streptococcus thermophilus LMD-9 0.07 84 4 G1 2608887 unclassified Streptococcus 0.03 40 40 S 3098075 Streptococcus sp. S1 0.03 35 35 S 2975324 Streptococcus sp. FSL R7-0248 0.00 4 4 S 3231906 Streptococcus sp. ZY19097 0.00 1 1 S 1839799 Streptococcus sp. FDAARGOS_192 0.05 59 59 S 2490633 Streptococcus periodonticum 0.04 55 50 S 1311 Streptococcus agalactiae 0.00 5 5 S1 1203670 Streptococcus agalactiae GD201008-001 0.04 48 46 S 1314 Streptococcus pyogenes 0.00 2 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 2 2 S2 160491 Streptococcus pyogenes str. Manfredo 0.04 47 29 S 1313 Streptococcus pneumoniae 0.01 13 13 S1 1159083 Streptococcus pneumoniae PCS8235 0.00 4 4 S1 869311 Streptococcus pneumoniae SPN032672 0.00 1 1 S1 516950 Streptococcus pneumoniae CGSP14 0.03 37 37 S 68892 Streptococcus infantis 0.02 28 28 S 1335 Streptococcus equinus 0.02 24 0 G1 671232 Streptococcus anginosus group 0.01 12 12 S 1328 Streptococcus anginosus 0.01 12 10 S 1338 Streptococcus intermedius 0.00 2 2 S1 862967 Streptococcus intermedius B196 0.01 17 17 S 1304 Streptococcus salivarius 0.01 13 13 S 1345 Streptococcus ferus 0.01 13 13 S 1341 Streptococcus ratti 0.01 10 10 S 1111760 Streptococcus troglodytae 0.01 9 9 S 1310 Streptococcus sobrinus 0.01 9 0 G1 119603 Streptococcus dysgalactiae group 0.00 5 0 S 1334 Streptococcus dysgalactiae 0.00 3 3 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 2 2 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 4 4 S 1336 Streptococcus equi 0.01 7 7 S 1811193 Streptococcus pantholopis 0.01 7 7 S 1346 Streptococcus iniae 0.01 7 7 S 1348 Streptococcus parauberis 0.00 6 6 S 1326 Streptococcus acidominimus 0.00 6 6 S 2021971 Streptococcus respiraculi 0.00 6 6 S 1307 Streptococcus suis 0.00 5 5 S 82348 Streptococcus pluranimalium 0.00 3 3 S 28037 Streptococcus mitis 0.00 2 0 S 1303 Streptococcus oralis 0.00 2 2 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 2 2 S 102886 Streptococcus didelphis 0.00 2 2 S 1825069 Streptococcus marmotae 0.00 2 2 S 2173853 Streptococcus chenjunshii 0.00 1 1 S 59310 Streptococcus macedonicus 0.00 1 1 S 149016 Streptococcus urinalis 0.00 1 1 S 197614 Streptococcus pasteurianus 0.00 1 1 S 1309 Streptococcus mutans 0.07 91 2 G 1357 Lactococcus 0.07 88 88 S 1366 Lactococcus raffinolactis 0.00 1 1 S 1359 Lactococcus cremoris 1.65 2126 0 F 81852 Enterococcaceae 1.65 2120 0 G 1350 Enterococcus 1.60 2058 2055 S 1351 Enterococcus faecalis 0.00 3 3 S1 1201292 Enterococcus faecalis ATCC 29212 0.04 55 55 S 1352 Enterococcus faecium 0.01 7 4 S 1354 Enterococcus hirae 0.00 3 3 S1 768486 Enterococcus hirae ATCC 9790 0.00 5 0 G 51668 Tetragenococcus 0.00 3 3 S 526944 Tetragenococcus osmophilus 0.00 2 2 S 51669 Tetragenococcus halophilus 0.00 1 1 G 2737 Vagococcus 0.68 875 27 F 33958 Lactobacillaceae 0.22 285 226 G 46255 Weissella 0.02 21 21 S 1631871 Weissella jogaejeotgali 0.01 19 19 S 137591 Weissella cibaria 0.00 5 5 S 1249 Weissella paramesenteroides 0.00 4 4 S 1583 Weissella confusa 0.00 4 4 S 1162633 Weissella diestrammenae 0.00 3 3 S 155866 Weissella soli 0.00 2 2 S 759620 Weissella ceti 0.00 1 1 S 165096 Weissella koreensis 0.12 160 153 G 1243 Leuconostoc 0.00 4 4 S 1252 Leuconostoc carnosum 0.00 3 3 S 1246 Leuconostoc lactis 0.12 149 48 G 1578 Lactobacillus 0.07 85 84 S 1584 Lactobacillus delbrueckii 0.00 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 4 1 G1 2620435 unclassified Lactobacillus 0.00 3 3 S 1545702 Lactobacillus sp. wkB8 0.00 3 1 S 1579 Lactobacillus acidophilus 0.00 2 2 S1 272621 Lactobacillus acidophilus NCFM 0.00 2 2 S 1587 Lactobacillus helveticus 0.00 2 2 S 33959 Lactobacillus johnsonii 0.00 2 2 S 47770 Lactobacillus crispatus 0.00 2 2 S 109790 Lactobacillus jensenii 0.00 1 1 S 1596 Lactobacillus gasseri 0.10 123 123 G 2767893 Lentilactobacillus 0.03 43 6 G 2742598 Limosilactobacillus 0.02 30 30 S 97478 Limosilactobacillus mucosae 0.00 5 5 S 1613 Limosilactobacillus fermentum 0.00 2 2 S 1598 Limosilactobacillus reuteri 0.03 37 0 G 2767887 Ligilactobacillus 0.02 21 21 S 1623 Ligilactobacillus ruminis 0.01 7 7 S 89059 Ligilactobacillus acidipiscis 0.00 6 6 S 1624 Ligilactobacillus salivarius 0.00 3 0 S 1622 Ligilactobacillus murinus 0.00 3 3 S1 1235801 Ligilactobacillus murinus ASF361 0.01 13 0 G 2767842 Lactiplantibacillus 0.01 12 12 S 1590 Lactiplantibacillus plantarum 0.00 1 1 S 1589 Lactiplantibacillus pentosus 0.01 8 8 G 2767889 Loigolactobacillus 0.00 6 0 G 2767886 Levilactobacillus 0.00 5 5 S 1580 Levilactobacillus brevis 0.00 1 1 S 2292255 Levilactobacillus suantsaii 0.00 5 1 G 2759736 Lacticaseibacillus 0.00 4 4 S 1597 Lacticaseibacillus paracasei 0.00 5 0 G 2767881 Fructilactobacillus 0.00 5 5 S 1625 Fructilactobacillus sanfranciscensis 0.00 4 0 G 2767874 Acetilactobacillus 0.00 4 4 S 1720083 Acetilactobacillus jinshanensis 0.00 3 0 G 2767885 Latilactobacillus 0.00 3 3 S 1599 Latilactobacillus sakei 0.00 3 3 G 46254 Oenococcus 0.00 1 0 G 2930384 Periweissella 0.00 1 1 S 2506420 Periweissella cryptocerci 0.00 1 0 G 2767877 Apilactobacillus 0.00 1 1 S 2419772 Apilactobacillus bombintestini 0.00 1 0 G 2767891 Schleiferilactobacillus 0.00 1 1 S 304207 Schleiferilactobacillus harbinensis 0.00 1 1 G 2767890 Paucilactobacillus 0.25 318 0 F 186828 Carnobacteriaceae 0.24 314 0 G 117563 Granulicatella 0.24 312 312 S 46124 Granulicatella adiacens 0.00 2 2 S 137732 Granulicatella elegans 0.00 2 1 G 29393 Dolosigranulum 0.00 1 0 G1 2622049 unclassified Dolosigranulum 0.00 1 1 S 3110289 Dolosigranulum sp. MSK312 0.00 1 1 G 2747 Carnobacterium 0.00 1 0 G 191769 Marinilactibacillus 0.00 1 0 G1 2632303 unclassified Marinilactibacillus 0.00 1 1 S 1911586 Marinilactibacillus sp. 15R 0.04 54 0 F 186827 Aerococcaceae 0.04 45 40 G 1375 Aerococcus 0.00 3 3 S 87541 Aerococcus christensenii 0.00 1 1 S 1376 Aerococcus urinae 0.00 1 1 S 3078812 Aerococcus tenax 0.00 6 0 G 2862144 Ruoffia 0.00 6 6 S 87458 Ruoffia tabacinasalis 0.00 3 0 G 89092 Ignavigranum 0.00 3 3 S 89093 Ignavigranum ruoffiae 3.40 4368 197 O 1385 Bacillales 1.52 1952 38 F 186817 Bacillaceae 0.83 1067 0 G 84406 Virgibacillus 0.83 1067 1067 S 447199 Virgibacillus salarius 0.59 757 101 G 1386 Bacillus 0.28 359 15 G1 86661 Bacillus cereus group 0.09 118 46 S 1396 Bacillus cereus 0.03 33 33 S1 1454382 Bacillus cereus D17 0.02 31 31 S1 1003239 Bacillus cereus C1L 0.00 4 4 S1 572264 Bacillus cereus 03BB102 0.00 3 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 3 3 S2 637380 Bacillus cereus biovar anthracis str. CI 0.00 1 1 S1 405532 Bacillus cereus B4264 0.08 109 79 S 1428 Bacillus thuringiensis 0.01 9 9 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 7 7 S1 180850 Bacillus thuringiensis serovar indiana 0.00 4 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.00 3 3 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.00 1 1 S2 1261129 Bacillus thuringiensis serovar kurstaki str. HD-1 0.00 3 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 3 3 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 3 3 S1 1423143 Bacillus thuringiensis Bt18247 0.00 3 3 S1 1217737 Bacillus thuringiensis HD-789 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.06 77 75 S 1392 Bacillus anthracis 0.00 2 2 S1 261591 Bacillus anthracis str. Vollum 0.01 12 0 G2 2750818 unclassified Bacillus cereus group 0.01 12 12 S 1892404 Bacillus sp. ABP14 0.01 8 7 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.01 7 7 S 64104 Bacillus pseudomycoides 0.00 6 6 S 2026191 Bacillus luti 0.00 5 5 S 2026186 Bacillus paranthracis 0.00 1 1 S 155322 Bacillus toyonensis 0.00 1 1 S 2817477 Bacillus paramobilis 0.20 256 5 G1 653685 Bacillus subtilis group 0.17 220 0 G2 1938374 Bacillus amyloliquefaciens group 0.14 186 184 S 492670 Bacillus velezensis 0.00 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.00 1 1 S1 1458206 Bacillus velezensis NJN-6 0.02 32 31 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 2 2 S 659243 Bacillus siamensis 0.02 26 10 S 1423 Bacillus subtilis 0.01 11 11 S1 86029 Bacillus subtilis subsp. natto 0.00 5 3 S1 135461 Bacillus subtilis subsp. subtilis 0.00 2 2 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 2 2 S 1452 Bacillus atrophaeus 0.00 2 2 S 483913 Bacillus inaquosorum 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.02 21 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.01 9 9 S 2874284 Bacillus sp. CRB-7 0.00 6 6 S 467262 Bacillus sp. T3 0.00 4 4 S 2841656 Bacillus sp. ZHX3 0.00 1 1 S 2925318 Bacillus sp. N5-665 0.00 1 1 S 3077323 Bacillus sp. SI2 0.01 15 0 G1 1792192 Bacillus altitudinis complex 0.01 15 15 S 293387 Bacillus altitudinis 0.00 2 2 S 1408 Bacillus pumilus 0.00 1 1 S 1455 Bacillus badius 0.00 1 1 S 561879 Bacillus safensis 0.00 1 1 S 1983719 Bacillus shivajii 0.02 23 0 G 400634 Lysinibacillus 0.01 18 0 G1 2636778 unclassified Lysinibacillus 0.01 18 18 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 3 3 S 28031 Lysinibacillus fusiformis 0.00 1 1 S 2086577 Lysinibacillus timonensis 0.00 1 1 S 2590012 Lysinibacillus agricola 0.01 17 0 G 2800373 Priestia 0.01 14 14 S 1404 Priestia megaterium 0.00 3 3 S 412384 Priestia aryabhattai 0.01 11 0 G 2675230 Cytobacillus 0.01 9 9 S 1399 Cytobacillus firmus 0.00 2 2 S 665099 Cytobacillus oceanisediminis 0.01 7 0 G 175304 Lentibacillus 0.00 6 6 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.00 4 0 G 2804231 Lederbergia 0.00 4 4 S 1467 Lederbergia lenta 0.00 4 0 G 2675229 Peribacillus 0.00 2 2 S 264697 Peribacillus muralis 0.00 1 1 S 1407 Peribacillus psychrosaccharolyticus 0.00 1 1 S 228899 Peribacillus asahii 0.00 4 1 G 459532 Terribacillus 0.00 2 2 S 361277 Terribacillus saccharophilus 0.00 1 0 G1 2636508 unclassified Terribacillus 0.00 1 1 S 2921447 Terribacillus sp. FSL K6-0262 0.00 3 0 G 2005375 Alkalicoccus 0.00 3 3 S 1667239 Alkalicoccus halolimnae 0.00 2 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 2 0 S 86665 Halalkalibacterium halodurans 0.00 2 2 S1 272558 Halalkalibacterium halodurans C-125 0.00 2 0 G 2837485 Evansella 0.00 2 0 S 1413 Evansella cellulosilytica 0.00 2 2 S1 649639 Evansella cellulosilytica DSM 2522 0.00 2 0 G 2837504 Heyndrickxia 0.00 2 2 S 1398 Heyndrickxia coagulans 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.00 1 0 G 45667 Halobacillus 0.00 1 1 S 45668 Halobacillus litoralis 0.00 1 0 G 2675233 Metabacillus 0.00 1 0 G1 2675274 unclassified Metabacillus 0.00 1 1 S 2897333 Metabacillus sp. B2-18 0.00 1 0 G 1329200 Fictibacillus 0.00 1 0 G1 2644029 unclassified Fictibacillus 0.00 1 1 S 2991053 Fictibacillus sp. KU28468 0.00 1 0 G 2675232 Neobacillus 0.00 1 1 S 1193713 Neobacillus mesonae 0.00 1 0 G 2675231 Mesobacillus 0.00 1 1 S 285983 Mesobacillus subterraneus 0.00 1 0 G 1434042 Salisediminibacterium 0.00 1 0 S 85683 Salisediminibacterium selenitireducens 0.00 1 1 S1 439292 [Bacillus] selenitireducens MLS10 0.00 1 0 G 129337 Geobacillus 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1233873 Geobacillus sp. GHH01 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 S 198467 Anoxybacillus gonensis 0.00 1 1 G 182709 Oceanobacillus 1.32 1698 5 F 90964 Staphylococcaceae 1.29 1658 196 G 1279 Staphylococcus 0.92 1187 1164 S 1280 Staphylococcus aureus 0.01 15 15 S1 1229492 Staphylococcus aureus 08BA02176 0.00 5 5 S1 273036 Staphylococcus aureus RF122 0.00 3 3 S1 548473 Staphylococcus aureus subsp. aureus TCH60 0.05 64 64 S 70255 Staphylococcus condimenti 0.04 49 48 S 1282 Staphylococcus epidermidis 0.00 1 1 S1 176280 Staphylococcus epidermidis ATCC 12228 0.04 47 45 S 29388 Staphylococcus capitis 0.00 2 2 S1 74703 Staphylococcus capitis subsp. urealyticus 0.03 37 37 S 1283 Staphylococcus haemolyticus 0.02 21 21 S 28035 Staphylococcus lugdunensis 0.01 14 0 G1 2815305 Staphylococcus intermedius group 0.01 12 12 S 283734 Staphylococcus pseudintermedius 0.00 2 2 S 53344 Staphylococcus delphini 0.01 10 10 S 1286 Staphylococcus simulans 0.01 8 8 S 1290 Staphylococcus hominis 0.00 6 6 S 985002 Staphylococcus argenteus 0.00 6 6 S 29378 Staphylococcus arlettae 0.00 3 3 S 29382 Staphylococcus cohnii 0.00 3 3 S 2044912 Staphylococcus debuckii 0.00 2 2 S 45972 Staphylococcus pasteuri 0.00 2 2 S 1294 Staphylococcus muscae 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2813777 Staphylococcus sp. SB1-57 0.00 1 1 S 170573 Staphylococcus pettenkoferi 0.00 1 1 S 29380 Staphylococcus caprae 0.02 32 0 G 45669 Salinicoccus 0.02 32 0 G1 2628837 unclassified Salinicoccus 0.02 32 32 S 3136731 Salinicoccus sp. Bachu38 0.00 2 0 G 2803850 Mammaliicoccus 0.00 2 2 S 1296 Mammaliicoccus sciuri 0.00 1 0 G 69965 Macrococcus 0.00 1 1 S 2875764 Macrococcus armenti 0.12 156 0 F 539738 Gemellaceae 0.12 156 30 G 1378 Gemella 0.09 112 112 S 84135 Gemella sanguinis 0.01 14 6 G1 2624949 unclassified Gemella 0.01 8 8 S 2840371 Gemella sp. zg-570 0.11 135 4 F 186818 Planococcaceae 0.09 113 0 G 889388 Chryseomicrobium 0.09 113 0 G1 2625558 unclassified Chryseomicrobium 0.09 113 113 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.01 9 9 G 1372 Planococcus 0.00 3 1 G 1569 Sporosarcina 0.00 2 0 G1 2647733 unclassified Sporosarcina 0.00 2 2 S 1930546 Sporosarcina sp. P37 0.00 3 0 G 160795 Ureibacillus 0.00 3 3 S 367743 Ureibacillus thermophilus 0.00 3 0 G 651660 Paenisporosarcina 0.00 3 3 S 2320858 Paenisporosarcina cavernae 0.08 107 1 F 186822 Paenibacillaceae 0.08 104 6 G 44249 Paenibacillus 0.03 40 0 G1 185978 unclassified Paenibacillus 0.01 12 12 S 715179 Paenibacillus sp. sptzw28 0.01 12 12 S 2741301 Paenibacillus sp. URB8-2 0.01 9 9 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 5 5 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 1 1 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 1 1 S 2954535 Paenibacillus sp. FSL R7-0345 0.03 33 33 S 44250 Paenibacillus alvei 0.01 9 8 S 1406 Paenibacillus polymyxa 0.00 1 1 S1 1413214 Paenibacillus polymyxa SQR-21 0.01 8 8 S 79263 Paenibacillus chitinolyticus 0.00 2 0 S 1464 Paenibacillus larvae 0.00 1 1 S1 1477 Paenibacillus larvae subsp. pulvifaciens 0.00 1 1 S1 147375 Paenibacillus larvae subsp. larvae 0.00 2 2 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 539262 Paenibacillus hunanensis 0.00 1 1 S 2509456 Paenibacillus protaetiae 0.00 1 0 G1 2044880 Paenibacillus sonchi group 0.00 1 0 S 483937 Paenibacillus riograndensis 0.00 1 1 S1 1073571 Paenibacillus riograndensis SBR5 0.00 1 1 S 130049 Paenibacillus dendritiformis 0.00 1 0 G 55080 Brevibacillus 0.00 1 1 S 45462 Brevibacillus borstelensis 0.00 1 0 F1 85151 Aneurinibacillus group 0.00 1 1 G 55079 Aneurinibacillus 0.06 78 0 O1 539002 Bacillales incertae sedis 0.06 78 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.06 78 8 G 33986 Exiguobacterium 0.05 70 70 S 1428684 Exiguobacterium alkaliphilum 0.02 26 0 F 186820 Listeriaceae 0.02 23 1 G 1637 Listeria 0.01 14 0 S 1638 Listeria ivanovii 0.01 14 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.01 14 14 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 6 0 G1 2642072 unclassified Listeria 0.00 6 6 S 1844999 Listeria sp. PSOL-1 0.00 2 2 S 1639 Listeria monocytogenes 0.00 3 0 G 2755 Brochothrix 0.00 3 3 S 2756 Brochothrix thermosphacta 0.01 7 0 F 186823 Alicyclobacillaceae 0.00 6 0 G 29330 Alicyclobacillus 0.00 6 6 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 G 1129704 Kyrpidia 0.00 6 0 F 186821 Sporolactobacillaceae 0.00 6 2 G 2077 Sporolactobacillus 0.00 4 4 S 269673 Sporolactobacillus terrae 0.00 6 4 F 186824 Thermoactinomycetaceae 0.00 1 0 G 1348505 Polycladomyces 0.00 1 1 S 1125966 Polycladomyces abyssicola 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 1.07 1374 84 C 186801 Clostridia 0.41 527 115 O 186802 Eubacteriales 0.17 219 6 F 216572 Oscillospiraceae 0.07 96 60 G 216851 Faecalibacterium 0.03 35 35 S 853 Faecalibacterium prausnitzii 0.00 1 1 S 3030638 Faecalibacterium taiwanense 0.05 59 1 G 1263 Ruminococcus 0.04 45 45 S 1161942 Ruminococcus champanellensis 0.00 4 4 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.00 4 4 S 2564099 Ruminococcus bovis 0.00 4 4 G1 2608920 unclassified Ruminococcus 0.00 1 1 S 438033 Ruminococcus gauvreauii 0.03 34 0 G 2842531 Solibaculum 0.03 34 34 S 2780922 Solibaculum mannosilyticum 0.01 11 2 G 292632 Subdoligranulum 0.01 9 9 S 214851 Subdoligranulum variabile 0.01 7 0 G 2892396 Vescimonas 0.01 7 7 S 2714355 Vescimonas coprocola 0.00 3 0 G 946234 Flavonifractor 0.00 3 3 S 292800 Flavonifractor plautii 0.00 1 0 G 3048127 Thermocaproicibacter 0.00 1 1 S 2966552 Thermocaproicibacter melissae 0.00 1 1 G 2834348 Caproicibacterium 0.00 1 0 G 2172004 Lawsonibacter 0.00 1 1 S 2108523 Lawsonibacter asaccharolyticus 0.04 52 0 O1 538999 Eubacteriales incertae sedis 0.04 51 12 G 1686313 Fenollaria 0.03 39 39 S 938288 Fenollaria massiliensis 0.00 1 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 1 0 G 2886866 Sinanaerobacter 0.00 1 0 G1 2886867 unclassified Sinanaerobacter 0.00 1 1 S 3111540 Sinanaerobacter sp. ZZT-01 0.04 47 2 F 31979 Clostridiaceae 0.04 45 3 G 1485 Clostridium 0.01 13 13 S 1502 Clostridium perfringens 0.01 8 8 S 1529 Clostridium cadaveris 0.00 6 0 S 1491 Clostridium botulinum 0.00 6 6 S1 1408283 Clostridium botulinum CDC_1436 0.00 5 5 S 36845 Clostridium intestinale 0.00 4 0 G1 2614128 unclassified Clostridium 0.00 3 3 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 2212991 Clostridium sp. AWRP 0.00 1 1 S 46867 Clostridium chauvoei 0.00 1 1 S 1488 Clostridium acetobutylicum 0.00 1 1 S 1216932 Clostridium bornimense 0.00 1 0 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.00 1 1 S 1520 Clostridium beijerinckii 0.00 1 1 S 1504 Clostridium septicum 0.03 36 28 F 31984 Heliobacteriaceae 0.01 8 0 G 79598 Heliorestis 0.01 8 8 S 356322 Heliorestis convoluta 0.02 30 0 F 3085642 Butyricicoccaceae 0.02 29 0 G 1928820 Intestinibacillus 0.02 29 0 G1 2635293 unclassified Intestinibacillus 0.02 29 29 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 G 2048137 Agathobaculum 0.00 1 0 G1 2620324 unclassified Agathobaculum 0.00 1 1 S 3079302 Agathobaculum sp. NTUH-O15-33 0.01 8 0 F 3046368 Aristaeellaceae 0.01 8 7 G 3046369 Aristaeella 0.00 1 1 S 3046382 Aristaeella hokkaidonensis 0.01 7 0 F 543349 Symbiobacteriaceae 0.01 7 0 G 1006480 Caldinitratiruptor 0.01 7 7 S 671077 Caldinitratiruptor microaerophilus 0.00 6 0 F 186806 Eubacteriaceae 0.00 6 0 G 1730 Eubacterium 0.00 6 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 6 6 S 2841528 Eubacterium sp. MSJ-33 0.00 2 0 F 1491775 Proteinivoraceae 0.00 2 2 G 1491776 Proteinivorax 0.00 2 0 F 68298 Syntrophomonadaceae 0.00 2 0 G 862 Syntrophomonas 0.00 2 0 S 863 Syntrophomonas wolfei 0.00 2 0 S1 370885 Syntrophomonas wolfei subsp. wolfei 0.00 2 2 S2 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 0.00 1 0 F 186807 Peptococcaceae 0.00 1 1 G 2916693 Desulforamulus 0.00 1 0 F 3047432 Maliibacteriaceae 0.00 1 0 G 3047433 Maliibacterium 0.00 1 1 S 2086585 Maliibacterium massiliense 0.00 1 0 F 3082771 Acutalibacteraceae 0.00 1 1 G 1738645 Caproiciproducens 0.34 433 2 O 3085636 Lachnospirales 0.33 419 27 F 186803 Lachnospiraceae 0.05 69 13 G 841 Roseburia 0.04 55 55 S 301301 Roseburia hominis 0.00 1 0 G1 2637578 unclassified Roseburia 0.00 1 1 S 1261635 Roseburia sp. 831b 0.04 51 0 G 1766253 Agathobacter 0.04 51 50 S 39491 Agathobacter rectalis 0.00 1 1 S1 515619 Agathobacter rectalis ATCC 33656 0.04 48 0 G 189330 Dorea 0.03 37 37 S 39486 Dorea formicigenerans 0.01 11 11 S 88431 Dorea longicatena 0.03 44 6 G 33042 Coprococcus 0.03 33 0 G1 2684943 unclassified Coprococcus 0.03 33 33 S 751585 Coprococcus sp. ART55/1 0.00 5 5 S 116085 Coprococcus catus 0.03 38 10 G 2316020 Mediterraneibacter 0.01 15 0 S 46228 [Ruminococcus] lactaris 0.01 15 15 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.01 12 2 S 33039 [Ruminococcus] torques 0.01 10 10 S1 657313 [Ruminococcus] torques L2-14 0.00 1 1 S 33038 Mediterraneibacter gnavus 0.02 29 21 G 572511 Blautia 0.00 5 0 S 40520 Blautia obeum 0.00 4 4 S1 657314 Blautia obeum A2-162 0.00 1 1 S1 411459 Blautia obeum ATCC 29174 0.00 2 0 G1 2648079 unclassified Blautia 0.00 2 2 S 2479767 Blautia sp. SC05B48 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.02 23 2 G 1164882 Lachnoanaerobaculum 0.01 19 19 S 2490855 Lachnoanaerobaculum gingivalis 0.00 2 2 S 617123 Lachnoanaerobaculum umeaense 0.01 17 0 G 2944193 Simiaoa 0.01 17 17 S 2763672 Simiaoa sunii 0.01 15 0 G 28050 Lachnospira 0.01 15 15 S 39485 Lachnospira eligens 0.01 15 0 G 1213720 Stomatobaculum 0.01 15 0 G1 2643635 unclassified Stomatobaculum 0.01 15 15 S 3059030 Stomatobaculum sp. F0698 0.01 13 0 G 2569097 Anaerobutyricum 0.01 13 13 S 39488 Anaerobutyricum hallii 0.01 8 0 G 1506553 Lachnoclostridium 0.01 8 0 S 66219 Lachnoclostridium phytofermentans 0.01 8 8 S1 357809 Lachnoclostridium phytofermentans ISDg 0.01 7 0 G 830 Butyrivibrio 0.00 6 6 S 831 Butyrivibrio fibrisolvens 0.00 1 1 S 45851 Butyrivibrio crossotus 0.00 5 0 G 2383 Candidatus Epulonipiscium 0.00 5 5 S 420336 Candidatus Epulonipiscium viviparus 0.00 3 0 G 207244 Anaerostipes 0.00 2 2 S 649756 Anaerostipes hadrus 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.00 2 0 G 2944195 Qiania 0.00 2 2 S 2763669 Qiania dongpingensis 0.00 2 0 G 2719231 Lacrimispora 0.00 1 1 S 84030 Lacrimispora saccharolytica 0.00 1 1 S 384636 Lacrimispora xylanisolvens 0.00 1 0 G 2719313 Enterocloster 0.00 1 1 S 208479 Enterocloster bolteae 0.00 1 0 G 1769710 Sellimonas 0.00 1 1 S 1653434 Sellimonas intestinalis 0.00 1 0 G 248744 Marvinbryantia 0.00 1 0 S 168384 Marvinbryantia formatexigens 0.00 1 1 S1 478749 Marvinbryantia formatexigens DSM 14469 0.01 8 0 F 2603322 Vallitaleaceae 0.01 8 0 G 2603323 Petrocella 0.01 8 8 S 2173034 Petrocella atlantisensis 0.00 2 0 F 3018741 Cellulosilyticaceae 0.00 2 1 G 698776 Cellulosilyticum 0.00 1 0 G1 2643091 unclassified Cellulosilyticum 0.00 1 1 S 2497860 Cellulosilyticum sp. WCF-2 0.00 2 0 F 3118652 Anaerotignaceae 0.00 2 0 G 2039240 Anaerotignum 0.00 2 0 S 28446 Anaerotignum propionicum 0.00 2 2 S1 991789 Anaerotignum propionicum DSM 1682 0.16 208 0 O 53433 Halanaerobiales 0.16 207 0 F 53434 Halobacteroidaceae 0.16 206 0 G 42417 Halobacteroides 0.16 206 0 S 42422 Halobacteroides halobius 0.16 206 206 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 1 0 O1 387655 Halanaerobiales incertae sedis 0.00 1 0 G 1769008 Anoxybacter 0.00 1 1 S 1323375 Anoxybacter fermentans 0.09 114 1 O 3082720 Peptostreptococcales 0.08 101 8 F 186804 Peptostreptococcaceae 0.07 85 0 G 1505657 Intestinibacter 0.07 85 85 S 261299 Intestinibacter bartlettii 0.00 3 0 G 1870884 Clostridioides 0.00 3 3 S 1496 Clostridioides difficile 0.00 2 0 G 1505652 Terrisporobacter 0.00 2 2 S 1460447 Terrisporobacter petrolearius 0.00 2 0 G 1849822 Paraclostridium 0.00 2 2 S 1505 Paraclostridium sordellii 0.00 1 0 G 1257 Peptostreptococcus 0.00 1 1 S 3003601 Peptostreptococcus equinus 0.01 10 0 F 3030910 Anaerovoracaceae 0.01 7 0 G 1926556 Emergencia 0.00 6 6 S 1776384 Emergencia timonensis 0.00 1 0 G1 2642996 unclassified Emergencia 0.00 1 1 S 3114296 Emergencia sp. JLR.KK010 0.00 3 3 G 86331 Mogibacterium 0.00 1 0 F 3118655 Filifactoraceae 0.00 1 0 G 44259 Filifactor 0.00 1 0 S 143361 Filifactor alocis 0.00 1 1 S1 546269 Filifactor alocis ATCC 35896 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 114627 Alkaliphilus 0.00 1 0 S 208226 Alkaliphilus metalliredigens 0.00 1 1 S1 293826 Alkaliphilus metalliredigens QYMF 0.00 4 0 O 68295 Thermoanaerobacterales 0.00 3 1 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 140458 Thermacetogenium 0.00 1 0 S 85874 Thermacetogenium phaeum 0.00 1 1 S1 1089553 Thermacetogenium phaeum DSM 12270 0.00 1 0 G 3051499 Aceticella 0.00 1 1 S 2755338 Aceticella autotrophica 0.00 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 1 0 G 252965 Mahella 0.00 1 0 S 252966 Mahella australiensis 0.00 1 1 S1 697281 Mahella australiensis 50-1 BON 0.00 3 0 O 3039167 Moorellales 0.00 2 0 F 3039168 Moorellaceae 0.00 2 0 G 202949 Thermanaeromonas 0.00 2 0 S 161154 Thermanaeromonas toyohensis 0.00 2 2 S1 698762 Thermanaeromonas toyohensis ToBE 0.00 1 0 F 3039170 Desulfitibacteraceae 0.00 1 0 G 3234175 Metallumcola 0.00 1 1 S 3039180 Metallumcola ferriviriculae 0.00 1 0 O 3082768 Christensenellales 0.00 1 0 F 990719 Christensenellaceae 0.00 1 1 G 990721 Christensenella 1.02 1309 0 C 909932 Negativicutes 0.97 1243 0 O 1843489 Veillonellales 0.97 1243 2 F 31977 Veillonellaceae 0.75 968 377 G 29465 Veillonella 0.25 319 319 S 39777 Veillonella atypica 0.13 173 173 S 423477 Veillonella rogosae 0.07 94 94 S 29466 Veillonella parvula 0.00 5 5 S 248315 Veillonella rodentium 0.12 150 10 G 39948 Dialister 0.11 136 136 S 487173 Dialister succinatiphilus 0.00 4 4 S 39950 Dialister pneumosintes 0.10 123 3 G 906 Megasphaera 0.09 119 119 S 907 Megasphaera elsdenii 0.00 1 1 S 1675036 Megasphaera hexanoica 0.03 35 0 O 1843488 Acidaminococcales 0.03 35 1 F 909930 Acidaminococcaceae 0.03 34 2 G 904 Acidaminococcus 0.02 32 0 S 905 Acidaminococcus fermentans 0.02 32 32 S1 591001 Acidaminococcus fermentans DSM 20731 0.02 31 0 O 909929 Selenomonadales 0.02 30 0 F 1843491 Selenomonadaceae 0.02 29 3 G 970 Selenomonas 0.02 24 0 S 971 Selenomonas ruminantium 0.02 24 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.02 24 24 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.00 2 0 G1 2637378 unclassified Selenomonas 0.00 2 2 S 3095337 Selenomonas sp. TAMA-11512 0.00 1 0 G 864 Pectinatus 0.00 1 1 S 865 Pectinatus frisingensis 0.00 1 0 F 1843490 Sporomusaceae 0.00 1 0 G 81463 Anaeromusa 0.00 1 0 G1 673272 environmental samples 0.00 1 1 S 673273 uncultured Anaeromusa sp. 0.37 482 0 C 1737404 Tissierellia 0.32 409 2 O 1737405 Tissierellales 0.30 392 0 F 1570339 Peptoniphilaceae 0.19 248 42 G 165779 Anaerococcus 0.07 93 0 S 33034 Anaerococcus prevotii 0.07 93 93 S1 525919 Anaerococcus prevotii DSM 20548 0.07 84 84 S 1755241 Anaerococcus nagyae 0.01 17 0 G1 2614126 unclassified Anaerococcus 0.01 17 17 S 3036300 Anaerococcus sp. Marseille-Q7828 0.01 12 12 S 1870984 Anaerococcus mediterraneensis 0.09 117 0 G 150022 Finegoldia 0.09 117 117 S 1260 Finegoldia magna 0.02 21 3 G 162289 Peptoniphilus 0.01 11 11 S 54005 Peptoniphilus harei 0.00 3 3 S 3016343 Peptoniphilus equinus 0.00 3 3 S 3036303 Peptoniphilus genitalis 0.00 1 1 S 54006 Peptoniphilus ivorii 0.00 6 0 G 1161127 Murdochiella 0.00 6 6 S 1852373 Murdochiella vaginalis 0.01 15 0 F 2992719 Tepidimicrobiaceae 0.01 14 0 G 1354809 Keratinibaculum 0.01 14 14 S 1278232 Keratinibaculum paraultunense 0.00 1 0 G 2794837 Schnuerera 0.00 1 0 S 45497 Schnuerera ultunensis 0.00 1 1 S1 1288971 [Clostridium] ultunense Esp 0.06 73 0 C1 1737407 Tissierellia incertae sedis 0.06 73 0 G 1582879 Ezakiella 0.04 45 45 S 46507 Ezakiella coagulans 0.02 28 28 S 1852374 Ezakiella massiliensis 0.10 128 0 C 526524 Erysipelotrichia 0.10 128 1 O 526525 Erysipelotrichales 0.06 79 0 F 2810280 Coprobacillaceae 0.06 78 3 G 135858 Catenibacterium 0.05 59 0 G1 2643636 unclassified Catenibacterium 0.05 59 59 S 2478954 Catenibacterium sp. co_0103 0.01 16 16 S 100886 Catenibacterium mitsuokai 0.00 1 1 G 3025755 Thomasclavelia 0.04 47 32 F 128827 Erysipelotrichaceae 0.00 6 0 G 123375 Solobacterium 0.00 6 6 S 102148 Solobacterium moorei 0.00 3 0 G 1647 Erysipelothrix 0.00 3 3 S 1648 Erysipelothrix rhusiopathiae 0.00 3 0 G 2749267 Amedibacterium 0.00 3 3 S 2583452 Amedibacterium intestinale 0.00 2 0 G 174708 Allobaculum 0.00 2 2 S 2834459 Allobaculum mucilyticum 0.00 1 0 G 1918536 Longicatena 0.00 1 1 S 1796635 Longicatena caecimuris 0.00 1 0 F 2810281 Turicibacteraceae 0.00 1 1 G 191303 Turicibacter 0.00 2 0 P1 2840488 Bacillota incertae sedis 0.00 2 0 O 3071001 Caldicellulosiruptorales 0.00 2 0 F 3071002 Caldicellulosiruptoraceae 0.00 2 2 G 44000 Caldicellulosiruptor 0.00 1 0 C 3086086 Dethiobacteria 0.00 1 0 O 3086087 Dethiobacterales 0.00 1 0 F 3086088 Dethiobacteraceae 0.00 1 0 G 338648 Candidatus Contubernalis 0.00 1 1 S 338645 Candidatus Contubernalis alkalaceticus 8.38 10768 6 P 201174 Actinomycetota 8.16 10494 106 C 1760 Actinomycetes 5.20 6682 12 O 85009 Propionibacteriales 5.16 6640 254 F 31957 Propionibacteriaceae 4.84 6217 72 G 1912216 Cutibacterium 4.55 5856 5845 S 1747 Cutibacterium acnes 0.01 7 6 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 1 1 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.00 2 2 S1 1122995 Cutibacterium acnes DSM 1897 0.00 1 1 S1 1234380 Cutibacterium acnes C1 0.00 1 1 S1 1905725 Cutibacterium acnes subsp. defendens 0.19 245 245 S 33011 Cutibacterium granulosum 0.03 37 37 S 33010 Cutibacterium avidum 0.01 7 7 S 2559073 Cutibacterium modestum 0.06 81 7 G 2801844 Arachnia 0.06 74 74 S 1750 Arachnia propionica 0.02 32 3 G 72763 Tessaracoccus 0.02 28 28 S 1285901 Tessaracoccus defluvii 0.00 1 1 S 2161816 Tessaracoccus timonensis 0.01 17 0 G 1912215 Acidipropionibacterium 0.01 16 16 S 1749 Acidipropionibacterium jensenii 0.00 1 1 S 2057246 Acidipropionibacterium virtanenii 0.01 15 4 G 29404 Microlunatus 0.00 5 5 S 630515 Microlunatus soli 0.00 4 0 G1 2619695 unclassified Microlunatus 0.00 4 4 S 2672569 Microlunatus sp. Gsoil 973 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.00 1 1 S 546874 Microlunatus sagamiharensis 0.01 10 0 G 1743 Propionibacterium 0.01 10 10 S 1744 Propionibacterium freudenreichii 0.00 6 3 G 1911549 Raineyella 0.00 3 3 S 2662261 Raineyella fluvialis 0.00 4 0 G 369926 Brooklawnia 0.00 4 4 S 3041175 Brooklawnia propionicigenes 0.00 2 0 G 1278221 Auraticoccus 0.00 2 2 S 675864 Auraticoccus monumenti 0.00 2 0 G 2919589 Vaginimicrobium 0.00 2 2 S 1871034 Vaginimicrobium propionicum 0.02 30 0 F 85015 Nocardioidaceae 0.01 16 1 G 1839 Nocardioides 0.01 10 10 S 627624 Nocardioides panacisoli 0.00 2 2 S 160826 Nocardioides aquaticus 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 3036374 Nocardioides sp. BP30 0.00 1 1 S 433659 Nocardioides mesophilus 0.00 1 1 S 1804624 Nocardioides baekrokdamisoli 0.01 12 11 G 2040 Aeromicrobium 0.00 1 0 G1 2633570 unclassified Aeromicrobium 0.00 1 1 S 1736306 Aeromicrobium sp. Leaf245 0.00 1 0 G 53387 Friedmanniella 0.00 1 1 S 546871 Friedmanniella luteola 0.00 1 0 G 3024237 Solicola 0.00 1 1 S 2908642 Solicola gregarius 1.36 1752 35 O 85006 Micrococcales 0.94 1203 9 F 1268 Micrococcaceae 0.81 1040 49 G 32207 Rothia 0.57 738 721 S 43675 Rothia mucilaginosa 0.01 17 17 S1 680646 Rothia mucilaginosa DY-18 0.16 205 205 S 2047 Rothia dentocariosa 0.03 35 35 S 172042 Rothia aeria 0.01 9 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.01 9 9 S 3047030 Rothia sp. SD9660Na 0.00 4 4 S 169480 Rothia amarae 0.05 67 45 G 57493 Kocuria 0.02 21 21 S 71999 Kocuria palustris 0.00 1 1 S 72000 Kocuria rhizophila 0.04 55 0 G 1742989 Glutamicibacter 0.03 41 0 G1 2627139 unclassified Glutamicibacter 0.03 41 41 S 1155384 Glutamicibacter sp. ZJUTW 0.01 14 14 S 37929 Glutamicibacter nicotianae 0.01 18 15 G 1269 Micrococcus 0.00 3 3 S 2856555 Micrococcus porci 0.00 4 0 G 1663 Arthrobacter 0.00 3 1 G1 235627 unclassified Arthrobacter 0.00 1 1 S 1494608 Arthrobacter sp. PAMC 25486 0.00 1 1 S 2828862 Arthrobacter sp. Helios 0.00 1 1 S 2964616 Arthrobacter zhaoxinii 0.00 4 4 G 57494 Nesterenkonia 0.00 3 0 G 1742993 Pseudarthrobacter 0.00 3 0 G1 2647000 unclassified Pseudarthrobacter 0.00 3 3 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 0 G 169133 Citricoccus 0.00 1 0 G1 2632435 unclassified Citricoccus 0.00 1 1 S 2567881 Citricoccus sp. SGAir0253 0.00 1 1 G 1160973 Auritidibacter 0.00 1 0 G 1742991 Pseudoglutamicibacter 0.00 1 1 S 98671 Pseudoglutamicibacter albus 0.10 129 0 F 2805591 Tropherymataceae 0.10 129 0 G 2038 Tropheryma 0.10 129 129 S 2039 Tropheryma whipplei 0.10 124 78 F 85023 Microbacteriaceae 0.01 19 10 G 33882 Microbacterium 0.00 4 0 G1 2609290 unclassified Microbacterium 0.00 2 2 S 2103230 Microbacterium sp. str. 'China' 0.00 1 1 S 2962064 Microbacterium sp. M28 0.00 1 1 S 1714373 Microbacterium sp. No. 7 0.00 1 1 S 3079935 Microbacterium limosum 0.00 1 1 S 3028316 Microbacterium horticulturae 0.00 1 1 S 1572644 Microbacterium proteolyticum 0.00 1 1 S 82380 Microbacterium oxydans 0.00 1 1 S 162426 Microbacterium hominis 0.01 8 0 F1 1655488 Luna cluster 0.01 8 5 F2 1655489 Luna-1 subcluster 0.00 3 0 G 529881 Aquiluna 0.00 3 2 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 5 5 G 55968 Leucobacter 0.00 4 4 G 33886 Rathayibacter 0.00 3 2 G 33877 Agromyces 0.00 1 1 S 2585717 Agromyces laixinhei 0.00 2 1 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2862880 Curtobacterium sp. TC1 0.00 2 0 G 1434022 Naasia 0.00 2 2 S 1162966 Naasia aerilata 0.00 1 0 G 447237 Frondihabitans 0.00 1 0 G1 2626248 unclassified Frondihabitans 0.00 1 1 S 1446794 Frondihabitans sp. 762G35 0.00 1 0 G 1433997 Diaminobutyricimonas 0.00 1 0 G1 2643261 unclassified Diaminobutyricimonas 0.00 1 1 S 2683590 Diaminobutyricimonas sp. LJ205 0.00 1 1 G 46352 Agrococcus 0.09 113 2 F 85019 Brevibacteriaceae 0.08 108 7 G 1696 Brevibacterium 0.07 91 0 G1 2614124 unclassified Brevibacterium 0.06 75 75 S 2575923 Brevibacterium sp. CS2 0.01 16 16 S 2999062 Brevibacterium sp. BRM-1 0.00 6 6 S 2697563 Brevibacterium atlanticum 0.00 2 2 S 33889 Brevibacterium casei 0.00 2 2 S 273384 Brevibacterium aurantiacum 0.00 3 0 G 3162691 Saxibacter 0.00 3 3 S 2909229 Saxibacter everestensis 0.06 83 0 F 85016 Cellulomonadaceae 0.06 83 0 G 1707 Cellulomonas 0.06 82 0 G1 2620175 unclassified Cellulomonas 0.06 82 82 S 2591145 Cellulomonas sp. Y8 0.00 1 0 S 11 Cellulomonas gilvus 0.00 1 1 S1 593907 Cellulomonas gilvus ATCC 13127 0.02 22 0 F 1331736 Ruaniaceae 0.02 22 22 G 626119 Ruania 0.01 18 0 F 2805590 Ornithinimicrobiaceae 0.01 18 16 G 125287 Ornithinimicrobium 0.00 1 1 S 2283195 Ornithinimicrobium avium 0.00 1 0 G1 2615080 unclassified Ornithinimicrobium 0.00 1 1 S 2908651 Ornithinimicrobium sp. INDO-MA30-4 0.01 14 1 F 85021 Intrasporangiaceae 0.01 10 0 G 267408 Arsenicicoccus 0.01 10 0 G1 2663846 unclassified Arsenicicoccus 0.01 10 10 S 1658671 Arsenicicoccus sp. oral taxon 190 0.00 3 0 G 367298 Phycicoccus 0.00 3 3 S 1690220 Phycicoccus endophyticus 0.01 7 0 F 85020 Dermabacteraceae 0.01 7 0 G 43668 Brachybacterium 0.01 7 6 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 3023517 Brachybacterium sp. GPGPB12 0.00 1 0 F 85022 Jonesiaceae 0.00 1 0 G 43673 Jonesia 0.00 1 1 S 43674 Jonesia denitrificans 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1184606 Austwickia 0.00 1 1 S 100225 Austwickia chelonae 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 1 G 154116 Georgenia 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 1 S 2509459 Xylanimonas allomyrinae 1.06 1361 7 O 85007 Mycobacteriales 0.99 1274 0 F 1653 Corynebacteriaceae 0.99 1274 712 G 1716 Corynebacterium 0.10 124 124 S 38284 Corynebacterium accolens 0.06 82 80 S 38289 Corynebacterium jeikeium 0.00 2 2 S1 306537 Corynebacterium jeikeium K411 0.05 61 61 S 43768 Corynebacterium matruchotii 0.02 30 30 S 43765 Corynebacterium amycolatum 0.02 29 29 S 187491 Corynebacterium glaucum 0.02 22 22 S 1758466 Corynebacterium faecale 0.02 21 21 S 161895 Corynebacterium phocae 0.01 19 19 S 53374 Corynebacterium coyleae 0.01 16 16 S 108486 Corynebacterium falsenii 0.01 15 15 S 2080740 Corynebacterium yudongzhengii 0.01 14 14 S 61592 Corynebacterium durum 0.01 13 13 S 43771 Corynebacterium urealyticum 0.01 12 12 S 679663 Corynebacterium canis 0.01 12 12 S 1719 Corynebacterium pseudotuberculosis 0.01 12 12 S 35757 Corynebacterium cystitidis 0.01 10 0 G1 2624378 unclassified Corynebacterium 0.00 4 4 S 1487956 Corynebacterium sp. ATCC 6931 0.00 4 4 S 2599641 Corynebacterium sp. sy039 0.00 2 2 S 3062461 Corynebacterium sp. BD556 0.01 10 0 S 441501 Corynebacterium massiliense 0.01 10 10 S1 1121364 Corynebacterium massiliense DSM 45435 0.01 9 9 S 2055947 Corynebacterium heidelbergense 0.01 8 0 S 575200 Corynebacterium maris 0.01 8 8 S1 1224163 Corynebacterium maris DSM 45190 0.00 5 5 S 2709392 Corynebacterium qintianiae 0.00 4 0 S 234828 Corynebacterium caspium 0.00 4 4 S1 1121355 Corynebacterium caspium DSM 44850 0.00 4 0 S 38288 Corynebacterium genitalium 0.00 4 4 S1 585529 Corynebacterium genitalium ATCC 33030 0.00 4 1 S 1717 Corynebacterium diphtheriae 0.00 3 3 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.00 3 0 S 1718 Corynebacterium glutamicum 0.00 3 3 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 3 3 S 169292 Corynebacterium aurimucosum 0.00 3 3 S 3049799 Corynebacterium breve 0.00 2 2 S 156978 Corynebacterium imitans 0.00 2 2 S 65058 Corynebacterium ulcerans 0.00 2 2 S 2709394 Corynebacterium lizhenjunii 0.00 2 2 S 1652495 Corynebacterium crudilactis 0.00 2 2 S 2768834 Corynebacterium zhongnanshanii 0.00 1 1 S 131318 Corynebacterium felinum 0.00 1 1 S 2675219 Corynebacterium occultum 0.00 1 0 S 1223514 Corynebacterium humireducens 0.00 1 1 S1 1223515 Corynebacterium humireducens NBRC 106098 = DSM 45392 0.00 1 1 S 1190508 Corynebacterium aquatimens 0.00 1 0 S 1721 Corynebacterium callunae 0.00 1 1 S1 1121353 Corynebacterium callunae DSM 20147 0.00 1 1 S 571915 Corynebacterium mustelae 0.00 1 1 S 699041 Corynebacterium hindlerae 0.04 49 0 F 2805586 Lawsonellaceae 0.04 49 0 G 1847725 Lawsonella 0.04 49 49 S 1528099 Lawsonella clevelandensis 0.01 18 0 F 1762 Mycobacteriaceae 0.01 7 0 G 670516 Mycobacteroides 0.01 7 7 S 36809 Mycobacteroides abscessus 0.00 6 2 G 1763 Mycobacterium 0.00 2 0 G1 77643 Mycobacterium tuberculosis complex 0.00 2 2 S 1773 Mycobacterium tuberculosis 0.00 1 0 G1 2249310 Mycobacterium simiae complex 0.00 1 1 S 185642 Mycobacterium parmense 0.00 1 1 G1 120793 Mycobacterium avium complex (MAC) 0.00 5 4 G 1866885 Mycolicibacterium 0.00 1 1 S 216929 Mycolicibacterium psychrotolerans 0.01 13 0 F 85025 Nocardiaceae 0.01 9 0 G 1817 Nocardia 0.00 6 6 S 37332 Nocardia seriolae 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975992 Nocardia sp. NBC_00508 0.00 1 1 S 53431 Nocardia salmonicida 0.00 1 1 S 480035 Nocardia wallacei 0.00 4 0 G 1827 Rhodococcus 0.00 2 2 S 37919 Rhodococcus opacus 0.00 1 1 S 1828 Rhodococcus fascians 0.00 1 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 679318 Rhodococcus sp. WMMA185 0.16 207 0 O 2037 Actinomycetales 0.16 207 12 F 2049 Actinomycetaceae 0.12 160 80 G 2529408 Schaalia 0.05 70 70 S 1660 Schaalia odontolytica 0.01 9 9 S 131110 Schaalia radingae 0.00 1 0 G1 2691889 unclassified Schaalia 0.00 1 1 S 2709403 Schaalia sp. ZJ405 0.02 24 0 G 184869 Varibaculum 0.02 24 24 S 2811781 Varibaculum prostatecancerukia 0.00 3 0 G 1654 Actinomyces 0.00 1 1 S 1659 Actinomyces israelii 0.00 1 1 S 461393 Actinomyces massiliensis 0.00 1 0 G1 2609248 unclassified Actinomyces 0.00 1 1 S 712122 Actinomyces sp. oral taxon 414 0.00 3 0 G 2692113 Gleimia 0.00 2 2 S 595468 Gleimia hominis 0.00 1 1 S 66228 Gleimia europaea 0.00 1 1 G 28263 Arcanobacterium 0.00 1 0 G 1522056 Flaviflexus 0.00 1 1 S 2496867 Flaviflexus ciconiae 0.00 1 0 G 1653174 Actinotignum 0.00 1 1 S 190146 Actinotignum urinale 0.00 1 0 G 2815785 Scrofimicrobium 0.00 1 0 G1 2815815 unclassified Scrofimicrobium 0.00 1 1 S 3079930 Scrofimicrobium sp. R131 0.00 1 0 G 2912996 Changpingibacter 0.00 1 1 S 2758440 Changpingibacter yushuensis 0.15 195 0 O 85004 Bifidobacteriales 0.15 195 4 F 31953 Bifidobacteriaceae 0.15 191 130 G 1678 Bifidobacterium 0.04 45 27 S 216816 Bifidobacterium longum 0.01 13 13 S1 1682 Bifidobacterium longum subsp. infantis 0.00 5 5 S1 1679 Bifidobacterium longum subsp. longum 0.00 4 4 S 1454229 Bifidobacterium faecale 0.00 4 4 S 28026 Bifidobacterium pseudocatenulatum 0.00 3 1 G1 2608897 unclassified Bifidobacterium 0.00 2 2 S 2983233 Bifidobacterium sp. ESL0790 0.00 2 2 S 1689 Bifidobacterium dentium 0.00 2 2 S 33905 Bifidobacterium thermophilum 0.00 1 0 S 1694 Bifidobacterium pseudolongum 0.00 1 1 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.09 119 0 O 85011 Kitasatosporales 0.09 119 0 F 2062 Streptomycetaceae 0.08 107 4 G 1883 Streptomyces 0.05 63 10 G1 2593676 unclassified Streptomyces 0.01 16 16 S 2903645 Streptomyces sp. NBC_00310 0.01 12 12 S 2750025 Streptomyces sp. CB00271 0.01 8 8 S 2099584 Streptomyces sp. ICC4 0.00 5 5 S 3075198 Streptomyces sp. ITFR-16 0.00 2 2 S 2718875 Streptomyces sp. SNU607 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 3062449 Streptomyces sp. VNUA116 0.00 1 1 S 2135430 Streptomyces sp. P3 0.00 1 1 S 2903818 Streptomyces sp. NBC_01304 0.00 1 1 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 2903723 Streptomyces sp. NBC_01022 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 2903644 Streptomyces sp. NBC_00273 0.00 1 1 S 2730915 Streptomyces sp. Z423-1 0.01 13 0 G1 1477431 Streptomyces albidoflavus group 0.01 13 13 S 1886 Streptomyces albidoflavus 0.00 3 3 S 1616117 Streptomyces formicae 0.00 3 0 S 285530 Streptomyces sviceus 0.00 3 3 S1 463191 Streptomyces sviceus ATCC 29083 0.00 3 3 S 35621 Streptomyces mobaraensis 0.00 2 2 S 173860 Streptomyces rectiverticillatus 0.00 2 2 S 887464 Streptomyces laculatispora 0.00 2 0 G1 2838335 Streptomyces aurantiacus group 0.00 2 2 S 58343 Streptomyces canus 0.00 1 1 S 1077946 Streptomyces hundungensis 0.00 1 1 S 51201 Streptomyces griseocarneus 0.00 1 1 S 33900 Streptomyces murinus 0.00 1 0 S 54571 Streptomyces venezuelae 0.00 1 1 S1 953739 Streptomyces venezuelae ATCC 10712 0.00 1 1 S 2496836 Streptomyces cyaneochromogenes 0.00 1 1 S 68270 Streptomyces spectabilis 0.00 1 1 S 1961 Streptomyces virginiae 0.00 1 0 G1 2839105 Streptomyces violaceusniger group 0.00 1 1 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 2508722 Streptomyces roseicoloratus 0.00 1 0 G1 2867164 Streptomyces rochei group 0.00 1 1 S 67376 Streptomyces vinaceusdrappus 0.00 1 1 S 2867410 Streptomyces profundus 0.00 1 1 S 2906474 Streptomyces spinosirectus 0.01 11 0 G 2063 Kitasatospora 0.01 10 0 G1 2633591 unclassified Kitasatospora 0.01 10 10 S 2903572 Kitasatospora sp. NBC_01266 0.00 1 1 S 67352 Kitasatospora purpeofusca 0.00 1 0 G 2995702 Actinacidiphila 0.00 1 1 S 1436133 Actinacidiphila bryophytorum 0.02 24 0 O 85008 Micromonosporales 0.02 24 2 F 28056 Micromonosporaceae 0.01 10 1 G 1873 Micromonospora 0.00 6 6 S 709879 Micromonospora halotolerans 0.00 2 0 G1 2617518 unclassified Micromonospora 0.00 1 1 S 3015158 Micromonospora sp. WMMC264 0.00 1 1 S 3016089 Micromonospora sp. WMMD987 0.00 1 1 S 307121 Micromonospora krabiensis 0.01 7 7 G 907364 Phytohabitans 0.00 3 0 G 168694 Salinispora 0.00 3 0 S 168695 Salinispora tropica 0.00 3 3 S1 369723 Salinispora tropica CNB-440 0.00 1 1 G 390988 Actinocatenispora 0.00 1 0 G 673534 Plantactinospora 0.00 1 0 G1 2631981 unclassified Plantactinospora 0.00 1 1 S 2108470 Plantactinospora sp. BC1 0.01 17 0 O 1643682 Geodermatophilales 0.01 17 1 F 85030 Geodermatophilaceae 0.01 15 0 G 38501 Blastococcus 0.01 10 0 G1 2619396 unclassified Blastococcus 0.01 10 10 S 3144843 Blastococcus sp. HT6-30 0.00 5 5 S 1564165 Blastococcus brunescens 0.00 1 0 G 1860 Geodermatophilus 0.00 1 0 S 1861 Geodermatophilus obscurus 0.00 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.01 13 0 O 85010 Pseudonocardiales 0.01 13 4 F 2070 Pseudonocardiaceae 0.01 8 0 G 1813 Amycolatopsis 0.01 8 0 G1 2618356 unclassified Amycolatopsis 0.01 7 7 S 2745196 Amycolatopsis sp. CA-230715 0.00 1 1 S 2742131 Amycolatopsis sp. Hca4 0.00 1 0 G 1835 Saccharopolyspora 0.00 1 0 G1 2646250 unclassified Saccharopolyspora 0.00 1 1 S 3118084 Saccharopolyspora sp. SCSIO 74807 0.00 6 0 O 85014 Glycomycetales 0.00 6 0 F 85034 Glycomycetaceae 0.00 6 0 G 2838311 Natronoglycomyces 0.00 6 6 S 2811108 Natronoglycomyces albus 0.00 5 0 O 622450 Actinopolysporales 0.00 5 0 F 622451 Actinopolysporaceae 0.00 5 0 G 1849 Actinopolyspora 0.00 5 5 S 414996 Actinopolyspora erythraea 0.00 3 0 O 85013 Frankiales 0.00 3 0 F 74712 Frankiaceae 0.00 3 0 G 1854 Frankia 0.00 3 3 S 106370 Frankia casuarinae 0.00 1 0 O 622452 Kineosporiales 0.00 1 0 F 83778 Kineosporiaceae 0.00 1 0 G 33981 Kineococcus 0.00 1 0 S 131568 Kineococcus radiotolerans 0.00 1 1 S1 266940 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 0.00 1 0 O 1217098 Jiangellales 0.00 1 0 F 1217100 Jiangellaceae 0.00 1 1 G 281472 Jiangella 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 147067 Thermobispora 0.00 1 1 S 2006 Thermobispora bispora 0.00 1 0 O 2039638 Candidatus Nanopelagicales 0.00 1 0 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.20 253 0 C 84998 Coriobacteriia 0.17 221 2 O 84999 Coriobacteriales 0.14 178 25 F 1643824 Atopobiaceae 0.06 76 0 G 1380 Atopobium 0.06 76 0 G1 2643817 unclassified Atopobium 0.06 76 76 S 712157 Atopobium sp. oral taxon 416 0.04 48 0 G 133925 Olsenella 0.02 30 0 S 133926 Olsenella uli 0.02 30 30 S1 633147 Olsenella uli DSM 7084 0.01 18 0 G1 2638792 unclassified Olsenella 0.01 18 18 S 712411 Olsenella sp. oral taxon 807 0.02 24 3 G 2082587 Parolsenella 0.02 21 21 S 2003188 Parolsenella catena 0.00 2 0 G 2767353 Lancefieldella 0.00 2 0 S 1382 Lancefieldella parvula 0.00 2 2 S1 521095 Lancefieldella parvula DSM 20469 0.00 1 0 G 2767327 Fannyhessea 0.00 1 1 S 82135 Fannyhessea vaginae 0.00 1 0 G 2847307 Thermophilibacter 0.00 1 1 S 2779519 Thermophilibacter immobilis 0.00 1 0 G 2847312 Parafannyhessea 0.00 1 1 S 604330 Parafannyhessea umbonata 0.03 41 0 F 84107 Coriobacteriaceae 0.03 40 0 G 102106 Collinsella 0.03 38 38 S 74426 Collinsella aerofaciens 0.00 2 2 S 147206 Collinsella stercoris 0.00 1 0 G 1472762 Enorma 0.00 1 1 S 1871019 Enorma phocaeensis 0.02 32 0 O 1643822 Eggerthellales 0.02 32 0 F 1643826 Eggerthellaceae 0.02 28 0 G 1926677 Raoultibacter 0.02 28 28 S 1907662 Raoultibacter timonensis 0.00 2 2 G 447020 Adlercreutzia 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.00 1 0 G 2981344 Xiamenia 0.00 1 1 S 2682776 Xiamenia xianingshaonis 0.01 8 0 C 908620 Nitriliruptoria 0.00 4 0 O 1747768 Egibacterales 0.00 4 0 F 1747769 Egibacteraceae 0.00 4 0 G 1747770 Egibacter 0.00 4 4 S 1670831 Egibacter rhizosphaerae 0.00 4 0 O 1755823 Egicoccales 0.00 4 0 F 1755824 Egicoccaceae 0.00 4 0 G 1755825 Egicoccus 0.00 4 4 S 1670830 Egicoccus halophilus 0.00 3 0 C 84992 Acidimicrobiia 0.00 3 0 O 84993 Acidimicrobiales 0.00 2 0 F 633392 Iamiaceae 0.00 1 0 G 467975 Iamia 0.00 1 0 G1 2624035 unclassified Iamia 0.00 1 1 S 2722752 Iamia sp. SCSIO 61187 0.00 1 0 G 3075137 Dermatobacter 0.00 1 1 S 2884263 Dermatobacter hominis 0.00 1 0 F 84994 Acidimicrobiaceae 0.00 1 0 G 53634 Acidimicrobium 0.00 1 0 S 53635 Acidimicrobium ferrooxidans 0.00 1 1 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.00 3 0 C 84995 Rubrobacteria 0.00 3 0 O 84996 Rubrobacterales 0.00 3 0 F 84997 Rubrobacteraceae 0.00 3 1 G 42255 Rubrobacter 0.00 2 2 S 2653851 Rubrobacter tropicus 0.00 1 0 C 1497346 Thermoleophilia 0.00 1 0 O 588673 Solirubrobacterales 0.00 1 0 F 320583 Conexibacteraceae 0.00 1 0 G 191494 Conexibacter 0.00 1 0 S 191495 Conexibacter woesei 0.00 1 1 S1 469383 Conexibacter woesei DSM 14684 0.48 622 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.48 622 5 P 1117 Cyanobacteriota 0.48 617 79 C 3028117 Cyanophyceae 0.32 414 3 C1 1301283 Oscillatoriophycideae 0.29 367 1 O 1150 Oscillatoriales 0.27 349 0 F 2934961 Sirenicapillariaceae 0.27 349 0 G 2596745 Limnospira 0.27 349 0 S 147322 Limnospira indica 0.27 345 345 S1 2760438 Limnospira indica BM01 0.00 4 4 S1 376219 Limnospira indica PCC 8005 0.01 14 0 F 1892252 Microcoleaceae 0.01 11 10 G 54304 Planktothrix 0.00 1 0 S 1160 Planktothrix agardhii 0.00 1 1 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.00 3 0 G 1492710 Oxynema 0.00 3 0 S 2874213 Oxynema aestuarii 0.00 3 3 S1 2064643 Oxynema aestuarii AP17 0.00 2 0 F 1892254 Oscillatoriaceae 0.00 2 0 G 1198 Phormidium 0.00 2 0 S 2974039 Phormidium yuhuli 0.00 2 2 S1 2940671 Phormidium yuhuli AB48 0.00 1 0 O1 1892256 Oscillatoriales incertae sedis 0.00 1 0 G 2023214 Koinonema 0.00 1 0 G1 2781947 unclassified Koinonema 0.00 1 1 S 222819 [Phormidium] sp. ETS-05 0.03 44 0 O 1118 Chroococcales 0.03 34 0 F 1890449 Microcystaceae 0.03 34 0 G 1125 Microcystis 0.03 34 0 G1 2643300 unclassified Microcystis 0.03 34 34 S 1967666 Microcystis sp. MC19 0.00 6 6 F 1890464 Chroococcaceae 0.00 4 0 F 1890450 Aphanothecaceae 0.00 4 0 G 1453359 Candidatus Atelocyanobacterium 0.00 4 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.00 4 4 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.05 59 0 O 1955042 Gloeomargaritales 0.05 59 0 F 1955043 Gloeomargaritaceae 0.05 59 0 G 1188227 Gloeomargarita 0.05 59 0 S 1188228 Gloeomargarita lithophora 0.05 59 59 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.02 30 6 O 1161 Nostocales 0.01 12 5 F 1162 Nostocaceae 0.00 4 0 G 1163 Anabaena 0.00 3 0 S 1165 Anabaena cylindrica 0.00 3 3 S1 272123 Anabaena cylindrica PCC 7122 0.00 1 0 G1 2619674 unclassified Anabaena 0.00 1 1 S 2490939 Anabaena sp. YBS01 0.00 3 1 G 1177 Nostoc 0.00 1 0 S 264686 Nostoc edaphicum 0.00 1 1 S1 1472755 Nostoc edaphicum CCNP1411 0.00 1 0 G1 2593658 unclassified Nostoc 0.00 1 1 S 2914041 Nostoc sp. UHCC 0870 0.01 7 1 F 1892259 Aphanizomenonaceae 0.00 3 0 G 748770 Dolichospermum 0.00 3 0 S 136073 Dolichospermum compactum 0.00 3 3 S1 1973481 Dolichospermum compactum NIES-806 0.00 3 0 G 752201 Sphaerospermopsis 0.00 3 0 S 984207 Sphaerospermopsis torques-reginae 0.00 3 3 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 4 0 F 1185 Rivulariaceae 0.00 4 0 G 373984 Rivularia 0.00 4 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 4 4 S 373994 Rivularia sp. PCC 7116 0.00 1 0 F 2661849 Calotrichaceae 0.00 1 0 G 1186 Calothrix 0.00 1 0 G1 2619626 unclassified Calothrix 0.00 1 1 S 2005462 Calothrix sp. NIES-3974 0.01 13 1 O 1890424 Synechococcales 0.01 10 0 F 1890426 Synechococcaceae 0.01 10 0 G 1129 Synechococcus 0.01 9 1 G1 2626047 unclassified Synechococcus 0.00 5 5 S 195250 Synechococcus sp. PCC 7336 0.00 3 3 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 1 S 32046 Synechococcus elongatus 0.00 2 0 F 2881426 Prochlorococcaceae 0.00 2 0 G 1218 Prochlorococcus 0.00 2 0 S 1219 Prochlorococcus marinus 0.00 2 2 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.01 11 11 O 307595 Gloeobacterales 0.00 3 0 O 2881377 Pseudanabaenales 0.00 3 0 F 1890436 Pseudanabaenaceae 0.00 3 0 G 1152 Pseudanabaena 0.00 3 0 G1 2593292 unclassified Pseudanabaena 0.00 3 3 S 82654 Pseudanabaena sp. PCC 7367 0.00 2 0 O 3039985 Nodosilineales 0.00 2 0 F 3039986 Nodosilineaceae 0.00 2 0 G 170610 Halomicronema 0.00 2 0 S 1209493 Halomicronema hongdechloris 0.00 2 2 S1 1641165 Halomicronema hongdechloris C2206 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 2 0 O 3079757 Gomontiellales 0.00 2 0 F 1890431 Chamaesiphonaceae 0.00 2 0 G 217161 Chamaesiphon 0.00 2 0 S 1173032 Chamaesiphon minutus 0.00 2 2 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 1 0 O 1890505 Chroococcidiopsidales 0.00 1 0 F 1890528 Chroococcidiopsidaceae 0.00 1 1 G 54298 Chroococcidiopsis 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 2881378 Thermosynechococcaceae 0.00 1 1 G 146785 Thermosynechococcus 0.17 217 83 P 544448 Mycoplasmatota 0.06 73 5 C 31969 Mollicutes 0.04 45 0 O 2085 Mycoplasmatales 0.03 43 0 F 2092 Mycoplasmataceae 0.03 43 4 G 2093 Mycoplasma 0.02 29 0 G1 2683645 unclassified Mycoplasma 0.01 16 16 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.01 10 10 S 2967302 Mycoplasma sp. 1018B 0.00 3 3 S 2801918 Mycoplasma sp. E35C 0.01 10 0 G1 656088 Mycoplasma mycoides group 0.01 8 8 S 1179777 Mycoplasma feriruminatoris 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 2 0 O1 1665628 unclassified Mycoplasmatales 0.00 2 2 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.01 17 0 O 186328 Entomoplasmatales 0.01 17 0 F 2131 Spiroplasmataceae 0.01 17 6 G 2132 Spiroplasma 0.01 7 1 G1 2637901 unclassified Spiroplasma 0.00 3 3 S 216963 Spiroplasma sp. TIUS-1 0.00 2 2 S 3066281 Spiroplasma endosymbiont of Asaphidion curtum 0.00 1 1 S 3066286 Spiroplasma endosymbiont of Crioceris asparagi 0.00 2 2 S 2139 Spiroplasma clarkii 0.00 2 2 S 216932 Spiroplasma chinense 0.00 6 0 O 186329 Acholeplasmatales 0.00 6 0 F 2146 Acholeplasmataceae 0.00 4 0 G 2147 Acholeplasma 0.00 4 4 S 2148 Acholeplasma laidlawii 0.00 2 0 G 33926 Candidatus Phytoplasma 0.00 1 0 G1 85628 16SrVIII (Loofah witches'-broom group) 0.00 1 1 S 35773 Candidatus Phytoplasma luffae 0.00 1 0 G1 85630 16SrX (Apple proliferation group) 0.00 1 1 S 37692 Candidatus Phytoplasma mali 0.05 58 0 O 2790996 Mycoplasmoidales 0.04 47 0 F 2895623 Metamycoplasmataceae 0.02 25 0 G 2895509 Metamycoplasma 0.02 25 25 S 45363 Metamycoplasma alkalescens 0.02 22 6 G 2767358 Mycoplasmopsis 0.01 7 7 S 55603 Mycoplasmopsis caviae 0.00 4 4 S 33923 Mycoplasmopsis felis 0.00 3 3 S 28903 Mycoplasmopsis bovis 0.00 1 1 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 2113 Mycoplasmopsis californica 0.01 11 1 F 2790998 Mycoplasmoidaceae 0.01 8 0 G 2791001 Malacoplasma 0.01 7 7 S 2116 Malacoplasma iowae 0.00 1 0 S 28227 Malacoplasma penetrans 0.00 1 1 S1 272633 Malacoplasma penetrans HF-2 0.00 2 1 G 2995234 Mycoplasmoides 0.00 1 1 S 92758 Mycoplasmoides fastidiosum 0.00 3 0 C 1912503 Candidatus Izimaplasma 0.00 3 0 O 2975519 Candidatus Izemoplasmatales 0.00 3 0 F 2975520 Candidatus Izemoplasmataceae 0.00 3 0 G 2975521 Candidatus Xianfuyuplasma 0.00 3 3 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.09 116 0 P 67819 Armatimonadota 0.09 112 0 C 1077257 Chthonomonadia 0.09 112 0 O 1077263 Chthonomonadales 0.09 112 0 F 1077264 Chthonomonadaceae 0.09 112 0 G 1077265 Chthonomonas 0.09 112 0 S 454171 Chthonomonas calidirosea 0.09 112 112 S1 1303518 Chthonomonas calidirosea T49 0.00 4 0 C 1663419 Fimbriimonadia 0.00 4 0 O 1663425 Fimbriimonadales 0.00 4 0 F 1663426 Fimbriimonadaceae 0.00 4 0 G 1005038 Fimbriimonas 0.00 4 0 S 1005039 Fimbriimonas ginsengisoli 0.00 4 4 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.07 94 0 P 200795 Chloroflexota 0.05 70 0 C 388447 Ktedonobacteria 0.05 70 0 O 388448 Ktedonobacterales 0.05 70 0 F 2692416 Ktedonosporobacteraceae 0.05 70 0 G 2692417 Ktedonosporobacter 0.05 70 70 S 2509675 Ktedonosporobacter rubrisoli 0.01 7 0 C 32061 Chloroflexia 0.00 5 0 O 3139175 Candidatus Chloroheliales 0.00 5 0 F 3139177 Candidatus Chloroheliaceae 0.00 5 0 G 3139173 Candidatus Chlorohelix 0.00 5 5 S 3003348 Candidatus Chlorohelix allophototropha 0.00 2 0 O 32064 Chloroflexales 0.00 1 0 O1 1508594 Chloroflexineae 0.00 1 0 F 1106 Chloroflexaceae 0.00 1 0 G 1107 Chloroflexus 0.00 1 0 S 152260 Chloroflexus aggregans 0.00 1 1 S1 326427 Chloroflexus aggregans DSM 9485 0.00 1 0 O1 1508595 Roseiflexineae 0.00 1 0 F 1508635 Roseiflexaceae 0.00 1 0 G 120961 Roseiflexus 0.00 1 0 G1 2609473 unclassified Roseiflexus 0.00 1 1 S 357808 Roseiflexus sp. RS-1 0.00 6 0 C 292625 Anaerolineae 0.00 6 0 O 292629 Anaerolineales 0.00 6 2 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 2 0 G 1649478 Pelolinea 0.00 2 2 S 913107 Pelolinea submarina 0.00 5 0 C 1382928 Ardenticatenia 0.00 5 0 O 3085098 Candidatus Promineifilales 0.00 5 0 F 3085097 Candidatus Promineifilaceae 0.00 5 0 G 1988031 Candidatus Promineifilum 0.00 5 5 S 1806508 Candidatus Promineifilum breve 0.00 3 0 C 301297 Dehalococcoidia 0.00 2 0 O 1202465 Dehalococcoidales 0.00 2 0 F 1202464 Dehalococcoidaceae 0.00 2 2 G 670486 Dehalogenimonas 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.02 22 0 P 1297 Deinococcota 0.02 22 0 C 188787 Deinococci 0.02 22 0 O 118964 Deinococcales 0.02 22 0 F 183710 Deinococcaceae 0.02 22 0 G 1298 Deinococcus 0.01 14 14 S 200252 Deinococcus aetherius 0.00 6 0 G1 2623546 unclassified Deinococcus 0.00 6 6 S 3093660 Deinococcus sp. AB2017081 0.00 2 2 S 1211322 Deinococcus metallilatus 0.00 4 0 P 3027942 Thermomicrobiota 0.00 4 0 C 189775 Thermomicrobia 0.00 3 0 O 189776 Thermomicrobiales 0.00 3 0 F 189777 Thermomicrobiaceae 0.00 3 0 G 499 Thermomicrobium 0.00 3 0 S 500 Thermomicrobium roseum 0.00 3 3 S1 309801 Thermomicrobium roseum DSM 5159 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 1.68 2161 0 D1 1783270 FCB group 1.67 2141 0 D2 68336 Bacteroidota/Chlorobiota group 1.66 2134 9 P 976 Bacteroidota 1.19 1524 0 C 200643 Bacteroidia 1.18 1521 9 O 171549 Bacteroidales 1.10 1413 26 F 171552 Prevotellaceae 0.60 777 44 G 2974251 Segatella 0.44 572 431 S 165179 Segatella copri 0.11 141 141 S1 537011 Segatella copri DSM 18205 0.11 135 135 S 2518605 Segatella hominis 0.02 25 25 S 28135 Segatella oris 0.00 1 1 S 77095 Segatella bryantii 0.42 536 95 G 838 Prevotella 0.07 93 93 S 470565 Prevotella histicola 0.07 86 0 G1 2638335 unclassified Prevotella 0.05 59 59 S 712471 Prevotella sp. oral taxon 475 0.02 23 0 S 652716 Prevotella sp. oral taxon 299 0.02 23 23 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 3 3 S 2937774 Prevotella sp. E15-22 0.00 1 1 S 2691580 Prevotella sp. Rep29 0.06 71 71 S 28129 Prevotella denticola 0.05 70 0 S 52227 Prevotella dentalis 0.05 70 70 S1 908937 Prevotella dentalis DSM 3688 0.05 61 61 S 28132 Prevotella melaninogenica 0.01 18 18 S 28133 Prevotella nigrescens 0.01 15 15 S 2801997 Prevotella herbatica 0.01 14 14 S 28131 Prevotella intermedia 0.01 8 0 S 589436 Prevotella fusca 0.01 8 8 S1 1236517 Prevotella fusca JCM 17724 0.00 2 2 S 28128 Prevotella corporis 0.00 1 1 S 28137 Prevotella veroralis 0.00 1 1 S 282402 Prevotella multiformis 0.00 1 1 S 1177574 Prevotella jejuni 0.04 53 0 G 2974257 Hoylesella 0.04 50 50 S 28127 Hoylesella buccalis 0.00 3 3 S 76123 Hoylesella enoeca 0.02 21 0 G 2884814 Pseudoprevotella 0.02 21 21 S 2133944 Pseudoprevotella muciniphila 0.04 46 0 F 171551 Porphyromonadaceae 0.04 46 0 G 836 Porphyromonas 0.03 36 0 G1 2645799 unclassified Porphyromonas 0.03 36 36 S 712435 Porphyromonas sp. oral taxon 275 0.01 10 10 S 322095 Porphyromonas somerae 0.03 36 0 F 815 Bacteroidaceae 0.03 36 1 G 816 Bacteroides 0.01 19 19 S 817 Bacteroides fragilis 0.01 8 8 S 46506 Bacteroides stercoris 0.01 7 7 S 818 Bacteroides thetaiotaomicron 0.00 1 1 S 28111 Bacteroides eggerthii 0.01 12 0 F 2005525 Tannerellaceae 0.01 8 1 G 375288 Parabacteroides 0.00 5 5 S 46503 Parabacteroides merdae 0.00 2 2 S 328812 Parabacteroides goldsteinii 0.00 4 0 G 195950 Tannerella 0.00 4 4 S 712710 Tannerella serpentiformis 0.00 2 0 F 2005473 Muribaculaceae 0.00 1 0 G 2518495 Duncaniella 0.00 1 1 G1 2649562 unclassified Duncaniella 0.00 1 0 G 2815786 Sodaliphilus 0.00 1 1 S 2606626 Sodaliphilus pleomorphus 0.00 1 0 F 171550 Rikenellaceae 0.00 1 0 G 1647173 Acetobacteroides 0.00 1 0 G1 1760810 environmental samples 0.00 1 1 S 1760811 uncultured Acetobacteroides sp. 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 1 G 294702 Proteiniphilum 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.00 3 0 O 1970189 Marinilabiliales 0.00 3 1 F 1573805 Marinifilaceae 0.00 2 0 G 866673 Marinifilum 0.00 2 0 G1 866674 environmental samples 0.00 2 2 S 1127472 uncultured Marinifilum sp. 0.27 343 0 C 117743 Flavobacteriia 0.27 343 3 O 200644 Flavobacteriales 0.13 170 20 F 49546 Flavobacteriaceae 0.07 94 13 G 237 Flavobacterium 0.03 44 29 G1 196869 unclassified Flavobacterium 0.01 7 7 S 2654325 Flavobacterium sp. xlx-214 0.00 4 4 S 2748319 Flavobacterium sp. I3-2 0.00 1 1 S 2775246 Flavobacterium sp. CS20 0.00 1 1 S 1979344 Flavobacterium sp. MDT1-60 0.00 1 1 S 2732161 Flavobacterium sp. IMCC34852 0.00 1 1 S 2977321 Flavobacterium sp. TR2 0.01 14 14 S 996 Flavobacterium columnare 0.01 12 12 S 2175091 Flavobacterium album 0.00 4 4 S 1563479 Flavobacterium dauae 0.00 3 3 S 2704140 Flavobacterium bizetiae 0.00 2 2 S 2602769 Flavobacterium alkalisoli 0.00 1 1 S 96345 Flavobacterium psychrophilum 0.00 1 0 S 312277 Flavobacterium indicum 0.00 1 1 S1 1094466 Flavobacterium indicum GPTSA100-9 = DSM 17447 0.04 48 30 G 1016 Capnocytophaga 0.01 16 16 S 1017 Capnocytophaga gingivalis 0.00 1 1 S 28188 Capnocytophaga canimorsus 0.00 1 1 G1 2640652 unclassified Capnocytophaga 0.00 3 0 G 286104 Winogradskyella 0.00 2 2 S 2686077 Winogradskyella forsetii 0.00 1 1 S 2697010 Winogradskyella helgolandensis 0.00 2 0 G 1287916 Euzebyella 0.00 2 2 S 1761453 Euzebyella marina 0.00 1 0 G 290174 Aquimarina 0.00 1 1 G1 2627091 unclassified Aquimarina 0.00 1 0 G 379068 Galbibacter 0.00 1 0 G1 2632773 unclassified Galbibacter 0.00 1 1 S 1170699 Galbibacter sp. BG1 0.00 1 1 G 153265 Aequorivita 0.10 123 2 F 2762318 Weeksellaceae 0.09 111 3 F1 2782232 Chryseobacterium group 0.08 108 55 G 59732 Chryseobacterium 0.03 33 33 S 1813611 Chryseobacterium cucumeris 0.01 14 0 G1 2593645 unclassified Chryseobacterium 0.01 11 11 S 3093923 Chryseobacterium sp. JJR-5R 0.00 2 2 S 2713414 Chryseobacterium sp. POL2 0.00 1 1 S 2838877 Chryseobacterium sp. ZHDP1 0.00 2 2 S 558152 Chryseobacterium piperi 0.00 2 2 S 651561 Chryseobacterium arthrosphaerae 0.00 1 1 S 253 Chryseobacterium indologenes 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.01 7 0 G 59734 Empedobacter 0.01 7 7 S 343874 Empedobacter falsenii 0.00 2 0 G 59735 Bergeyella 0.00 2 2 S 1585976 Bergeyella cardium 0.00 1 0 G 34084 Riemerella 0.00 1 1 S 103810 Riemerella columbina 0.04 46 0 O1 313602 Flavobacteriales incertae sedis 0.04 45 0 G 336809 Candidatus Karelsulcia 0.04 45 45 S 336810 Candidatus Karelsulcia muelleri 0.00 1 0 G 1940138 Candidatus Walczuchella 0.00 1 1 S 1415657 Candidatus Walczuchella monophlebidarum 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 0 G 34098 Blattabacterium 0.00 1 1 S 1653831 Blattabacterium cuenoti 0.18 230 0 C 768503 Cytophagia 0.18 230 1 O 768507 Cytophagales 0.17 214 0 F 89373 Cytophagaceae 0.17 214 1 G 107 Spirosoma 0.16 200 200 S 2666025 Spirosoma endbachense 0.00 6 6 S 2735870 Spirosoma taeanense 0.00 5 5 S 2728024 Spirosoma rhododendri 0.00 1 1 S 2057025 Spirosoma pollinicola 0.00 1 0 G1 2621999 unclassified Spirosoma 0.00 1 1 S 2520506 Spirosoma sp. KCTC 42546 0.00 6 0 F 1501348 Amoebophilaceae 0.00 5 0 G 273135 Candidatus Cardinium 0.00 5 5 S 247481 Candidatus Cardinium hertigii 0.00 1 0 G 281119 Candidatus Amoebophilus 0.00 1 0 S 281120 Candidatus Amoebophilus asiaticus 0.00 1 1 S1 452471 Candidatus Amoebophilus asiaticus 5a2 0.00 3 0 F 1853234 Persicobacteraceae 0.00 3 0 G 1434007 Fulvitalea 0.00 3 3 S 1182444 Fulvitalea axinellae 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 1 S 2607656 Hymenobacter busanensis 0.00 1 0 G 1649474 Nibribacter 0.00 1 1 S 2698458 Nibribacter ruber 0.00 2 0 F 2896860 Spirosomataceae 0.00 1 1 G 120831 Dyadobacter 0.00 1 0 G 332157 Larkinella 0.00 1 1 S 332158 Larkinella insperata 0.00 1 0 F 563798 Cyclobacteriaceae 0.00 1 0 G 280472 Aquiflexum 0.00 1 0 S 280473 Aquiflexum balticum 0.00 1 1 S1 758820 Aquiflexum balticum DSM 16537 0.00 1 0 F 3141702 Leadbetterellaceae 0.00 1 1 G 312278 Emticicia 0.02 25 0 C 117747 Sphingobacteriia 0.02 25 0 O 200666 Sphingobacteriales 0.02 25 2 F 84566 Sphingobacteriaceae 0.01 14 1 G 423349 Mucilaginibacter 0.01 11 1 G1 2617802 unclassified Mucilaginibacter 0.01 9 9 S 3048589 Mucilaginibacter sp. 5C4 0.00 1 1 S 2929803 Mucilaginibacter sp. SMC90 0.00 2 2 S 1173583 Mucilaginibacter sabulilitoris 0.01 8 7 G 28453 Sphingobacterium 0.00 1 0 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 3112958 Sphingobacterium sp. R2 0.00 1 1 G 84567 Pedobacter 0.00 3 0 C 1853228 Chitinophagia 0.00 3 0 O 1853229 Chitinophagales 0.00 3 0 F 563835 Chitinophagaceae 0.00 3 0 G 2812019 Pseudocnuella 0.00 3 3 S 2502779 Pseudocnuella soli 0.00 4 0 P 1090 Chlorobiota 0.00 4 0 C 191410 Chlorobiia 0.00 4 1 O 191411 Chlorobiales 0.00 3 0 F 2968741 Chloroherpetonaceae 0.00 3 0 G 100715 Chloroherpeton 0.00 3 0 S 100716 Chloroherpeton thalassium 0.00 3 3 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 2 0 P 1853220 Rhodothermota 0.00 2 0 C 1853222 Rhodothermia 0.00 2 0 O 1853224 Rhodothermales 0.00 1 0 F 563843 Rhodothermaceae 0.00 1 0 G 29548 Rhodothermus 0.00 1 1 S 29549 Rhodothermus marinus 0.00 1 0 F 1853225 Salinibacteraceae 0.00 1 0 G 146918 Salinibacter 0.00 1 1 S 146919 Salinibacter ruber 0.00 1 0 P 1134404 Ignavibacteriota 0.00 1 0 C 795747 Ignavibacteria 0.00 1 0 O 795748 Ignavibacteriales 0.00 1 0 F 795749 Ignavibacteriaceae 0.00 1 0 G 795750 Ignavibacterium 0.00 1 0 S 591197 Ignavibacterium album 0.00 1 1 S1 945713 Ignavibacterium album JCM 16511 0.02 20 0 P 142182 Gemmatimonadota 0.02 20 0 C 219685 Gemmatimonadia 0.02 20 0 O 219686 Gemmatimonadales 0.02 20 0 F 219687 Gemmatimonadaceae 0.01 14 0 G 1706036 Gemmatirosa 0.01 14 14 S 861299 Gemmatirosa kalamazoonensis 0.00 6 0 G 173479 Gemmatimonas 0.00 6 6 S 1379270 Gemmatimonas phototrophica 0.79 1017 5 P 200940 Thermodesulfobacteriota 0.74 957 0 C 3031651 Desulfuromonadia 0.74 956 1 O 69541 Desulfuromonadales 0.74 947 0 F 213421 Desulfuromonadaceae 0.74 947 943 G 890 Desulfuromonas 0.00 4 4 S 1603606 Desulfuromonas soudanensis 0.01 8 0 F 3031659 Geopsychrobacteraceae 0.01 8 0 G 37817 Desulfuromusa 0.01 8 0 G1 97902 environmental samples 0.01 8 8 S 219183 uncultured Desulfuromusa sp. 0.00 1 0 O 3031668 Geobacterales 0.00 1 0 F 213422 Geobacteraceae 0.00 1 0 G 28231 Geobacter 0.00 1 0 G1 2627627 unclassified Geobacter 0.00 1 1 S 1277350 Geobacter sp. DSM 9736 0.02 24 0 C 3031646 Desulfarculia 0.02 24 0 O 453227 Desulfarculales 0.02 24 0 F 453228 Desulfarculaceae 0.02 24 0 G 453229 Desulfarculus 0.02 24 0 S 453230 Desulfarculus baarsii 0.02 24 24 S1 644282 Desulfarculus baarsii DSM 2075 0.01 19 0 C 67799 Thermodesulfobacteria 0.01 19 17 O 188710 Thermodesulfobacteriales 0.00 2 0 F 188711 Thermodesulfobacteriaceae 0.00 2 0 G 2033601 Thermosulfuriphilus 0.00 2 2 S 1936021 Thermosulfuriphilus ammonigenes 0.00 6 0 C 3031449 Desulfovibrionia 0.00 6 0 O 213115 Desulfovibrionales 0.00 6 0 F 194924 Desulfovibrionaceae 0.00 4 0 G 2910978 Megalodesulfovibrio 0.00 4 0 S 879 Megalodesulfovibrio gigas 0.00 4 4 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 1 1 G 872 Desulfovibrio 0.00 1 0 G 2035811 Pseudodesulfovibrio 0.00 1 0 S 182210 Pseudodesulfovibrio aespoeensis 0.00 1 1 S1 643562 Pseudodesulfovibrio aespoeensis Aspo-2 0.00 3 0 C 3031451 Desulfobulbia 0.00 3 0 O 3024411 Desulfobulbales 0.00 3 0 F 213121 Desulfobulbaceae 0.00 3 0 G 893 Desulfobulbus 0.00 3 3 S 1986146 Desulfobulbus oralis 0.00 2 0 C 3024418 Desulfobacteria 0.00 2 0 O 213118 Desulfobacterales 0.00 2 0 F 213119 Desulfobacteraceae 0.00 2 2 G 2289 Desulfobacter 0.00 1 0 C 3031450 Candidatus Desulfofervidia 0.00 1 0 O 3031460 Candidatus Desulfofervidales 0.00 1 0 F 1902584 Candidatus Desulfofervidaceae 0.00 1 0 G 1902583 Candidatus Desulfofervidus 0.00 1 1 S 1621989 Candidatus Desulfofervidus auxilii 0.22 280 0 P 32066 Fusobacteriota 0.22 280 0 C 203490 Fusobacteriia 0.22 280 0 O 203491 Fusobacteriales 0.15 190 0 F 203492 Fusobacteriaceae 0.15 190 170 G 848 Fusobacterium 0.00 5 5 S 851 Fusobacterium nucleatum 0.00 4 1 S 155615 Fusobacterium vincentii 0.00 3 3 S1 1307427 Fusobacterium vincentii ChDC F8 0.00 3 3 S 76859 Fusobacterium animalis 0.00 3 3 S 2764326 Fusobacterium hominis 0.00 2 0 S 859 Fusobacterium necrophorum 0.00 2 2 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.00 2 2 S 2663009 Fusobacterium pseudoperiodonticum 0.00 1 1 S 76857 Fusobacterium polymorphum 0.07 89 1 F 1129771 Leptotrichiaceae 0.07 88 28 G 32067 Leptotrichia 0.02 28 0 G1 2633022 unclassified Leptotrichia 0.01 19 19 S 712362 Leptotrichia sp. oral taxon 221 0.00 6 6 S 712357 Leptotrichia sp. oral taxon 212 0.00 3 3 S 712368 Leptotrichia sp. oral taxon 498 0.02 22 22 S 157687 Leptotrichia wadei 0.00 5 5 S 157691 Leptotrichia shahii 0.00 3 3 S 157688 Leptotrichia hofstadii 0.00 1 0 S 40542 Leptotrichia buccalis 0.00 1 1 S1 523794 Leptotrichia buccalis C-1013-b 0.00 1 1 S 109328 Leptotrichia trevisanii 0.00 1 0 F 3072461 Haliovirgaceae 0.00 1 0 G 3072462 Haliovirga 0.00 1 1 S 2996794 Haliovirga abyssi 0.11 146 0 P 29547 Campylobacterota 0.11 146 0 C 3031852 Epsilonproteobacteria 0.11 145 2 O 213849 Campylobacterales 0.06 82 0 F 72294 Campylobacteraceae 0.06 82 59 G 194 Campylobacter 0.01 10 0 G1 2593542 unclassified Campylobacter 0.01 8 8 S 1660080 Campylobacter sp. RM16192 0.00 2 2 S 2840180 Campylobacter sp. 19-13652 0.00 4 4 S 827 Campylobacter ureolyticus 0.00 3 3 S 197 Campylobacter jejuni 0.00 1 0 S 196 Campylobacter fetus 0.00 1 1 S1 32020 Campylobacter fetus subsp. venerealis 0.00 1 1 S 1813019 Campylobacter hepaticus 0.00 1 1 S 1448857 Campylobacter corcagiensis 0.00 1 1 S 449520 Campylobacter canadensis 0.00 1 1 S 76517 Campylobacter hominis 0.00 1 1 S 206 Campylobacter sputorum 0.05 58 0 F 2932623 Sulfurospirillaceae 0.05 58 0 G 57665 Sulfurospirillum 0.05 58 0 S 66821 Sulfurospirillum multivorans 0.05 58 58 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 3 0 F 72293 Helicobacteraceae 0.00 3 0 G 209 Helicobacter 0.00 3 3 S 213 Helicobacter cinaedi 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 224467 Nautiliaceae 0.00 1 0 G 191301 Caminibacter 0.00 1 1 S 1424653 Caminibacter pacificus 0.11 136 0 D1 1783257 PVC group 0.06 71 0 P 74201 Verrucomicrobiota 0.03 40 0 C 203494 Verrucomicrobiia 0.02 25 0 O 134621 Limisphaerales 0.02 25 0 F 3050006 Fontisphaeraceae 0.02 25 0 G 3050007 Fontisphaera 0.02 25 25 S 2974023 Fontisphaera persica 0.01 15 0 O 48461 Verrucomicrobiales 0.01 15 0 F 203557 Verrucomicrobiaceae 0.01 13 0 G 2735 Verrucomicrobium 0.01 13 0 G1 2625155 unclassified Verrucomicrobium 0.01 13 13 S 1882831 Verrucomicrobium sp. GAS474 0.00 2 0 G 518753 Luteolibacter 0.00 2 0 G1 2637149 unclassified Luteolibacter 0.00 2 2 S 2995170 Luteolibacter sp. SL250 0.01 19 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 19 0 G 1541670 Methylacidimicrobium 0.01 19 19 G1 2730358 unclassified Methylacidimicrobium 0.01 7 2 C 414999 Opitutia 0.00 4 0 O 415001 Puniceicoccales 0.00 4 0 O1 3056381 Puniceicoccales incertae sedis 0.00 4 0 G 3049269 Candidatus Pelagisphaera 0.00 4 4 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 O 415000 Opitutales 0.00 1 0 F 134623 Opitutaceae 0.00 1 0 G 2892920 Synoicihabitans 0.00 1 1 S 2909285 Synoicihabitans lomoniglobus 0.00 5 0 C 1955630 Methylacidiphilae 0.00 5 0 O 717963 Methylacidiphilales 0.00 5 0 F 717964 Methylacidiphilaceae 0.00 5 5 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.04 48 0 P 203682 Planctomycetota 0.03 41 12 C 203683 Planctomycetia 0.01 12 0 O 2691356 Isosphaerales 0.01 12 2 F 1763524 Isosphaeraceae 0.01 9 0 G 127 Isosphaera 0.01 9 0 S 128 Isosphaera pallida 0.01 9 9 S1 575540 Isosphaera pallida ATCC 43644 0.00 1 0 G 1763521 Paludisphaera 0.00 1 1 S 1387353 Paludisphaera borealis 0.01 10 0 O 2691355 Gemmatales 0.01 10 0 F 1914233 Gemmataceae 0.01 7 0 G 1382832 Telmatocola 0.01 7 7 S 1123043 Telmatocola sphagniphila 0.00 2 0 G 2731450 Limnoglobus 0.00 2 2 S 2598579 Limnoglobus roseus 0.00 1 0 G 2807415 Urbifossiella 0.00 1 1 S 2528023 Urbifossiella limnaea 0.00 5 0 O 2691354 Pirellulales 0.00 2 1 F 2691357 Pirellulaceae 0.00 1 0 G 2714594 Bremerella 0.00 1 0 G1 2795601 unclassified Bremerella 0.00 1 1 S 3026424 Bremerella sp. P1 0.00 2 1 F 2691359 Lacipirellulaceae 0.00 1 0 G 2795783 Pirellulimonas 0.00 1 1 S 2528009 Pirellulimonas nuda 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.00 2 0 O 112 Planctomycetales 0.00 2 0 F 126 Planctomycetaceae 0.00 2 0 G 2795865 Thalassoglobus 0.00 2 2 S 2527994 Thalassoglobus polymorphus 0.00 6 0 C 2897345 Candidatus Uabimicrobiia 0.00 6 0 O 2897347 Candidatus Uabimicrobiales 0.00 6 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 6 0 G 2897349 Candidatus Uabimicrobium 0.00 6 6 S 2596890 Candidatus Uabimicrobium amorphum 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 2483366 Sedimentisphaerales 0.00 1 0 F 2690158 Anaerohalosphaeraceae 0.00 1 0 G 2690159 Anaerohalosphaera 0.00 1 1 S 1936003 Anaerohalosphaera lusitana 0.01 16 0 P 204428 Chlamydiota 0.01 16 14 C 204429 Chlamydiia 0.00 2 0 O 1963360 Parachlamydiales 0.00 1 0 F 92713 Parachlamydiaceae 0.00 1 0 G 282132 Candidatus Protochlamydia 0.00 1 1 S 389348 Candidatus Protochlamydia naegleriophila 0.00 1 0 F 689704 Candidatus Rhabdochlamydiaceae 0.00 1 1 G 292833 Candidatus Rhabdochlamydia 0.00 1 0 P 134625 Kiritimatiellota 0.00 1 0 C 2907184 Tichowtungiia 0.00 1 0 O 2907185 Tichowtungiales 0.00 1 0 F 2907186 Tichowtungiaceae 0.00 1 0 G 2907187 Tichowtungia 0.00 1 1 S 2697043 Tichowtungia aerotolerans 0.08 102 0 D1 2323 Bacteria incertae sedis 0.08 102 0 D2 1783234 Bacteria candidate phyla 0.05 68 35 P 95818 Candidatus Saccharibacteria 0.03 33 0 C 2093818 Candidatus Saccharimonadia 0.02 28 0 O 2093825 Candidatus Saccharimonadales 0.02 28 0 F 2171986 Candidatus Saccharimonadaceae 0.02 28 0 G 1331051 Candidatus Saccharimonas 0.02 28 28 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 5 0 O 2093819 Candidatus Nanosynbacterales 0.00 5 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 5 1 G 2093823 Candidatus Nanosynbacter 0.00 4 4 S 2093824 Candidatus Nanosynbacter lyticus 0.03 34 0 D3 95901 Candidatus Dependentiae 0.03 34 0 C 2497643 Candidatus Babeliae 0.03 34 0 O 2497644 Candidatus Babeliales 0.03 34 0 F 2953756 Candidatus Chromulinivoraceae 0.03 34 0 G 2953757 Candidatus Chromulinivorax 0.03 34 34 S 2066483 Candidatus Chromulinivorax destructor 0.03 37 0 P 3018035 Bdellovibrionota 0.02 27 0 C 3031419 Bacteriovoracia 0.02 27 0 O 2024979 Bacteriovoracales 0.02 24 0 F 263369 Bacteriovoracaceae 0.02 23 0 G 263370 Peredibacter 0.02 23 23 S 28202 Peredibacter starrii 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 3 0 F 1652132 Halobacteriovoraceae 0.00 3 0 G 1652133 Halobacteriovorax 0.00 2 0 G1 2639665 unclassified Halobacteriovorax 0.00 2 2 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 1 1 S 97084 Halobacteriovorax marinus 0.01 10 0 C 3031418 Bdellovibrionia 0.01 10 0 O 213481 Bdellovibrionales 0.01 10 1 F 213483 Pseudobdellovibrionaceae 0.01 8 8 G 958 Bdellovibrio 0.00 1 0 G 213485 Micavibrio 0.00 1 1 S 349221 Micavibrio aeruginosavorus 0.02 22 0 P 508458 Synergistota 0.02 22 0 C 649775 Synergistia 0.02 22 0 O 649776 Synergistales 0.02 22 0 F 649777 Synergistaceae 0.02 21 0 G 81411 Aminomonas 0.02 21 0 S 81412 Aminomonas paucivorans 0.02 21 21 S1 584708 Aminomonas paucivorans DSM 12260 0.00 1 0 G 81461 Thermanaerovibrio 0.00 1 0 S 81462 Thermanaerovibrio acidaminovorans 0.00 1 1 S1 525903 Thermanaerovibrio acidaminovorans DSM 6589 0.01 12 0 P 203691 Spirochaetota 0.01 12 0 C 203692 Spirochaetia 0.01 9 0 O 136 Spirochaetales 0.00 6 0 F 1643685 Borreliaceae 0.00 6 0 G 64895 Borreliella 0.00 5 5 S 29519 Borreliella garinii 0.00 1 1 S 100177 Borreliella lusitaniae 0.00 2 0 F 2845253 Treponemataceae 0.00 2 0 G 157 Treponema 0.00 1 1 S 162 Treponema phagedenis 0.00 1 0 S 88058 Treponema primitia 0.00 1 1 S1 545694 Treponema primitia ZAS-2 0.00 1 0 F 137 Spirochaetaceae 0.00 1 0 G 3115661 Candidatus Haliotispira 0.00 1 1 S 3034016 Candidatus Haliotispira prima 0.00 3 0 O 1643688 Leptospirales 0.00 3 0 F 170 Leptospiraceae 0.00 3 1 G 171 Leptospira 0.00 2 2 S 28183 Leptospira santarosai 0.01 9 0 P 2818505 Myxococcota 0.00 6 0 P1 3031711 Polyangia 0.00 6 0 O 3031712 Polyangiales 0.00 6 0 F 49 Polyangiaceae 0.00 6 0 G 39643 Sorangium 0.00 6 6 S 56 Sorangium cellulosum 0.00 3 0 C 32015 Myxococcia 0.00 3 0 O 29 Myxococcales 0.00 3 1 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 224458 Pyxidicoccus 0.00 1 1 S 2813578 Pyxidicoccus parkwaysis 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 1 G 161492 Anaeromyxobacter 0.01 8 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 8 0 P 1293497 Nitrospinota 0.01 8 0 C 1293498 Nitrospinia 0.01 8 0 O 1293499 Nitrospinales 0.01 8 0 F 407032 Nitrospinaceae 0.01 8 0 G 35800 Nitrospina 0.01 8 8 S 1323948 Nitrospina watsonii 0.00 5 0 P 200783 Aquificota 0.00 5 0 C 187857 Aquificia 0.00 5 0 O 32069 Aquificales 0.00 4 0 F 224027 Hydrogenothermaceae 0.00 4 4 G 212790 Sulfurihydrogenibium 0.00 1 1 F 64898 Aquificaceae 0.00 5 0 P 200930 Deferribacterota 0.00 5 0 C 68337 Deferribacteres 0.00 5 2 O 191393 Deferribacterales 0.00 1 1 F 2945019 Geovibrionaceae 0.00 1 0 F 2945021 Calditerrivibrionaceae 0.00 1 0 G 545865 Calditerrivibrio 0.00 1 0 S 477976 Calditerrivibrio nitroreducens 0.00 1 1 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 1 0 F 2945022 Flexistipitaceae 0.00 1 0 G 2351 Flexistipes 0.00 1 0 S 2352 Flexistipes sinusarabici 0.00 1 1 S1 717231 Flexistipes sinusarabici DSM 4947 0.00 2 0 D1 2498710 Caldisericota/Cryosericota group 0.00 2 0 P 67814 Caldisericota 0.00 2 0 C 693071 Caldisericia 0.00 2 0 O 693072 Caldisericales 0.00 2 0 F 693073 Caldisericaceae 0.00 2 0 G 693074 Caldisericum 0.00 2 0 S 693075 Caldisericum exile 0.00 2 2 S1 511051 Caldisericum exile AZM16c01 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 P 200918 Thermotogota 0.00 1 0 C 188708 Thermotogae 0.00 1 1 O 2419 Thermotogales 0.00 2 0 D 2157 Archaea 0.00 2 0 P 28890 Euryarchaeota 0.00 2 0 C 2545688 Candidatus Methanoliparia 0.00 2 0 O 2545689 Candidatus Methanoliparales 0.00 2 0 F 2545690 Candidatus Methanoliparaceae 0.00 2 0 G 2545692 Candidatus Methanoliparum 0.00 2 0 G1 2874847 unclassified Candidatus Methanoliparum 0.00 2 2 S 2874846 Candidatus Methanoliparum sp. LAM-1 0.20 251 0 D 10239 Viruses 0.15 195 0 D1 2731341 Duplodnaviria 0.15 195 0 K 2731360 Heunggongvirae 0.15 195 0 P 2731618 Uroviricota 0.15 195 0 C 2731619 Caudoviricetes 0.08 103 0 F 2946167 Peduoviridae 0.08 103 0 G 2948703 Evevirus 0.08 103 0 S 2955874 Evevirus ev239 0.08 103 103 S1 2695847 Escherichia phage ESSI2_ev239 0.07 89 0 F 2946170 Straboviridae 0.07 89 0 F1 1198136 Tevenvirinae 0.07 89 0 G 10663 Tequatrovirus 0.07 88 0 S 2844199 Tequatrovirus gee4507 0.07 88 88 S1 2502306 Escherichia phage vB_EcoM_G4507 0.00 1 0 S 2846203 Tequatrovirus shfml11 0.00 1 1 S1 1863008 Shigella phage SHFML-11 0.00 3 0 G 186789 Punavirus 0.00 3 0 S 10678 Punavirus P1 0.00 3 3 S1 2886926 Escherichia phage P1 0.04 56 0 C 2840056 Naldaviricetes 0.04 56 0 O 2840070 Lefavirales 0.04 56 0 F 10442 Baculoviridae 0.04 56 0 G 558017 Betabaculovirus 0.04 56 0 S 3051997 Betabaculovirus chofumiferanae 0.04 56 56 S1 56947 Choristoneura fumiferana granulovirus