32.57 33454 33454 U 0 unclassified 67.43 69256 14 R 1 root 67.36 69184 1 R1 131567 cellular organisms 67.35 69176 3223 D 2 Bacteria 52.45 53876 526 P 1224 Pseudomonadota 32.14 33012 256 C 28211 Alphaproteobacteria 31.26 32105 64 O 204441 Rhodospirillales 30.95 31784 0 F 2844601 Stellaceae 30.95 31784 0 G 93 Stella 30.95 31784 31784 S 94 Stella humosa 0.22 226 1 F 433 Acetobacteraceae 0.21 214 0 G 512381 Acidisoma 0.21 214 0 G1 2634065 unclassified Acidisoma 0.21 214 214 S 3040935 Acidisoma sp. PAMC 29798 0.01 10 0 G 504465 Rhodovastum 0.01 10 10 S 504468 Rhodovastum atsumiense 0.00 1 0 G 1706033 Sediminicoccus 0.00 1 1 S 1225128 Sediminicoccus rosea 0.03 30 0 F 41295 Rhodospirillaceae 0.03 29 0 G 111830 Defluviicoccus 0.03 29 29 S 111831 Defluviicoccus vanus 0.00 1 0 G 1263978 Candidatus Endolissoclinum 0.00 1 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 0 F 2690195 Elioraeaceae 0.00 1 0 G 457933 Elioraea 0.00 1 1 S 2843330 Elioraea tepida 0.27 280 0 O 204458 Caulobacterales 0.27 280 0 F 76892 Caulobacteraceae 0.27 280 1 G 41275 Brevundimonas 0.27 279 0 G1 2622653 unclassified Brevundimonas 0.27 277 277 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 1938605 Brevundimonas sp. LM2 0.00 1 1 S 2591463 Brevundimonas sp. M20 0.25 252 3 O 356 Hyphomicrobiales 0.16 163 0 F 82115 Rhizobiaceae 0.15 159 145 F1 227290 Rhizobium/Agrobacterium group 0.01 11 3 G 379 Rhizobium 0.00 5 0 S 384 Rhizobium leguminosarum 0.00 5 3 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 2 2 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 3 0 G1 2613769 unclassified Rhizobium 0.00 3 3 S 2952477 Rhizobium sp. SSA_523 0.00 2 0 G 1612611 Pararhizobium 0.00 2 0 G1 2643050 unclassified Pararhizobium 0.00 2 2 S 2986920 Pararhizobium sp. YC-54 0.00 1 0 G 357 Agrobacterium 0.00 1 1 S 2792015 Agrobacterium leguminum 0.00 4 4 G 34019 Liberibacter 0.07 73 4 F 119045 Methylobacteriaceae 0.06 64 40 G 407 Methylobacterium 0.01 13 13 S 410 Methylobacterium organophilum 0.00 5 0 S 31998 Methylobacterium radiotolerans 0.00 5 5 S1 426355 Methylobacterium radiotolerans JCM 2831 0.00 4 4 S 570505 Methylobacterium bullatum 0.00 2 1 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 5 2 G 186650 Microvirga 0.00 3 0 G1 2617746 unclassified Microvirga 0.00 3 3 S 2807101 Microvirga sp. VF16 0.01 7 0 F 41294 Nitrobacteraceae 0.01 7 0 G 374 Bradyrhizobium 0.01 6 6 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 1 S 2854389 Bradyrhizobium prioriisuperbiae 0.00 3 0 F 2831106 Devosiaceae 0.00 2 0 G 46913 Devosia 0.00 1 0 G1 196773 unclassified Devosia 0.00 1 1 S 2976459 Devosia sp. SD17-2 0.00 1 1 S 2774137 Devosia rhizoryzae 0.00 1 0 G 3064792 Mariluticola 0.00 1 1 S 2909283 Mariluticola halotolerans 0.00 2 0 F 655351 Cohaesibacteraceae 0.00 2 0 G 655352 Cohaesibacter 0.00 2 0 G1 1002545 environmental samples 0.00 2 2 S 1002546 uncultured Cohaesibacter sp. 0.00 1 0 F 118882 Brucellaceae 0.00 1 0 F1 2826938 Brucella/Ochrobactrum group 0.00 1 0 G 234 Brucella 0.00 1 0 S 29459 Brucella melitensis 0.00 1 0 S1 645169 Brucella melitensis bv. 2 0.00 1 1 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.04 38 8 O 204457 Sphingomonadales 0.03 27 2 F 41297 Sphingomonadaceae 0.02 22 15 G 13687 Sphingomonas 0.00 3 0 G1 196159 unclassified Sphingomonas 0.00 3 3 S 2596913 Sphingomonas sp. NBWT7 0.00 1 1 S 33051 Sphingomonas sanguinis 0.00 1 1 S 2972485 Sphingomonas endolithica 0.00 1 1 S 1541170 Sphingomonas morindae 0.00 1 1 S 2698679 Sphingomonas changnyeongensis 0.00 1 0 G 165697 Sphingopyxis 0.00 1 0 G1 2614943 unclassified Sphingopyxis 0.00 1 1 S 1914525 Sphingopyxis sp. FD7 0.00 1 0 G 2676781 Aquisediminimonas 0.00 1 1 S 1550733 Aquisediminimonas profunda 0.00 1 0 G 1234545 Parasphingopyxis 0.00 1 1 S 2026624 Parasphingopyxis algicola 0.00 2 0 F 2820280 Sphingosinicellaceae 0.00 2 1 G 1508451 Polymorphobacter 0.00 1 0 G1 2629224 unclassified Polymorphobacter 0.00 1 1 S 2862331 Polymorphobacter sp. PAMC 29334 0.00 1 0 F 335929 Erythrobacteraceae 0.00 1 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 1 0 G 1111 Porphyrobacter 0.00 1 0 G1 2683265 unclassified Porphyrobacter 0.00 1 1 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.03 35 1 O 766 Rickettsiales 0.03 28 1 F 942 Anaplasmataceae 0.03 26 0 G 2883098 Candidatus Mesenet 0.03 26 26 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 G 768 Anaplasma 0.01 6 0 F 775 Rickettsiaceae 0.00 5 0 F1 33988 Rickettsieae 0.00 4 0 G 780 Rickettsia 0.00 3 0 G1 114277 spotted fever group 0.00 3 0 S 781 Rickettsia conorii 0.00 3 3 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 G 1742636 Candidatus Megaera 0.00 1 1 S 988779 Candidatus Megaera polyxenophila 0.03 28 7 O 204455 Rhodobacterales 0.02 18 0 F 31989 Paracoccaceae 0.01 9 7 G 265 Paracoccus 0.00 2 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.00 5 0 G 2831955 Pikeienuella 0.00 5 5 S 2748098 Pikeienuella piscinae 0.00 3 0 G 204456 Gemmobacter 0.00 3 3 S 2169400 Gemmobacter aquarius 0.00 1 0 G 2818469 Fuscovulum 0.00 1 1 S 3042299 Fuscovulum ytuae 0.00 3 0 F 2854170 Roseobacteraceae 0.00 1 0 G 302485 Phaeobacter 0.00 1 1 S 221822 Phaeobacter inhibens 0.00 1 0 G 58842 Sagittula 0.00 1 1 G1 2624628 unclassified Sagittula 0.00 1 0 G 60136 Sulfitobacter 0.00 1 1 G1 196795 unclassified Sulfitobacter 0.01 14 0 O 2800059 Maricaulales 0.01 14 0 F 2800061 Maricaulaceae 0.01 14 0 G 74317 Maricaulis 0.01 14 14 S 74318 Maricaulis maris 0.00 2 0 O 2800060 Hyphomonadales 0.00 2 0 F 69657 Hyphomonadaceae 0.00 2 2 G 85 Hyphomonas 0.00 2 0 O 1921002 Holosporales 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2601651 Candidatus Nesciobacter 0.00 1 1 S 2601668 Candidatus Nesciobacter abundans 0.00 1 0 F 2100208 Caedimonadaceae 0.00 1 0 G 1509243 Candidatus Nucleicultrix 0.00 1 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.00 1 1 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 19.21 19726 550 C 1236 Gammaproteobacteria 16.43 16874 0 O 135614 Lysobacterales 16.43 16871 2 F 32033 Lysobacteraceae 16.41 16856 0 G 338 Xanthomonas 16.41 16856 16856 S 29447 Xanthomonas albilineans 0.01 10 1 G 40323 Stenotrophomonas 0.00 5 5 S 216778 Stenotrophomonas rhizophila 0.00 2 0 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 1 0 G2 2961925 unclassified Stenotrophomonas maltophilia group 0.00 1 1 S 2072413 Stenotrophomonas sp. SAU14A_NAIMI4_5 0.00 2 2 S 3003271 Stenotrophomonas oahuensis 0.00 2 0 G 68 Lysobacter 0.00 1 1 S 435897 Lysobacter capsici 0.00 1 1 S 69 Lysobacter enzymogenes 0.00 1 0 G 83614 Luteimonas 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 1896164 Luteimonas sp. JM171 0.00 3 1 F 1775411 Rhodanobacteraceae 0.00 2 0 G 75309 Rhodanobacter 0.00 1 1 S 666685 Rhodanobacter denitrificans 0.00 1 0 G1 2621553 unclassified Rhodanobacter 0.00 1 1 S 3158582 Rhodanobacter sp. IGA1.0 1.29 1320 38 O 91347 Enterobacterales 0.87 890 145 F 543 Enterobacteriaceae 0.19 192 188 F1 36866 unclassified Enterobacteriaceae 0.00 2 2 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.00 2 2 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.16 163 0 F1 2890311 Klebsiella/Raoultella group 0.16 163 10 G 570 Klebsiella 0.11 110 106 S 573 Klebsiella pneumoniae 0.00 4 4 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.04 36 36 S 548 Klebsiella aerogenes 0.01 6 3 S 1463165 Klebsiella quasipneumoniae 0.00 3 3 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 0 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.16 163 1 G 561 Escherichia 0.16 162 149 S 562 Escherichia coli 0.00 5 5 S1 316435 Escherichia coli Nissle 1917 0.00 4 4 S1 1322345 Escherichia coli ATCC 25922 0.00 2 2 S1 2874053 Escherichia coli O25:H1 0.00 1 1 S1 331112 Escherichia coli HS 0.00 1 1 S1 2079157 Escherichia coli O2:H1 0.15 154 0 G 547 Enterobacter 0.15 154 0 G1 354276 Enterobacter cloacae complex 0.14 143 143 S 299767 Enterobacter ludwigii 0.01 6 6 S 158836 Enterobacter hormaechei 0.00 2 1 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 2 2 S 208224 Enterobacter kobei 0.00 1 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.05 51 3 G 590 Salmonella 0.05 48 6 S 28901 Salmonella enterica 0.04 42 0 S1 59201 Salmonella enterica subsp. enterica 0.01 10 10 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.01 8 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 6 6 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 2 2 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 8 8 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 8 7 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 3 3 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 2 2 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.01 11 0 F1 191675 Enterobacteriaceae incertae sedis 0.01 11 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 8 0 F3 84564 ant endosymbionts 0.00 5 4 G 203804 Candidatus Blochmanniella 0.00 1 1 S 251538 Candidatus Blochmannia ocreatus 0.00 3 0 G 1699619 Candidatus Westeberhardia 0.00 3 3 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 2 0 F3 146507 aphid secondary symbionts 0.00 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 1 0 G 1302410 Candidatus Annandia 0.00 1 1 S 1302411 Candidatus Annandia adelgestsuga 0.00 2 0 G 544 Citrobacter 0.00 1 0 S 35703 Citrobacter amalonaticus 0.00 1 1 S1 1261127 Citrobacter amalonaticus Y19 0.00 1 0 G1 1344959 Citrobacter freundii complex 0.00 1 1 S 546 Citrobacter freundii 0.00 2 0 G 2815296 Jejubacter 0.00 2 2 S 2579935 Jejubacter calystegiae 0.00 2 0 G 413496 Cronobacter 0.00 2 2 S 413503 Cronobacter malonaticus 0.00 1 0 G 620 Shigella 0.00 1 1 S 623 Shigella flexneri 0.00 1 0 G 1330547 Kosakonia 0.00 1 1 S 208223 Kosakonia cowanii 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 409304 Candidatus Ishikawella 0.00 1 0 S 168169 Candidatus Ishikawella capsulata 0.00 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 1 0 G 401618 Candidatus Riesia 0.00 1 1 S 401619 Candidatus Riesia pediculicola 0.16 165 1 F 1903411 Yersiniaceae 0.16 162 1 G 613 Serratia 0.15 151 151 S 138074 Serratia symbiotica 0.00 5 0 S 2338073 Serratia inhibens 0.00 5 5 S1 1154756 Serratia inhibens PRI-2C 0.00 2 0 S 82996 Serratia plymuthica 0.00 2 2 S1 1006598 Serratia plymuthica RVH1 0.00 2 2 S 614 Serratia liquefaciens 0.00 1 1 S 61652 Serratia rubidaea 0.00 1 0 G 629 Yersinia 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 649716 Yersinia pestis Pestoides G 0.00 1 1 G 1927833 Candidatus Fukatsuia 0.09 93 24 F 1903409 Erwiniaceae 0.04 43 0 G 551 Erwinia 0.04 42 42 S 1922217 Candidatus Erwinia haradaeae 0.00 1 0 G1 2622719 unclassified Erwinia 0.00 1 1 S 215689 Erwinia sp. Ejp617 0.02 25 17 G 53335 Pantoea 0.00 2 2 S 1235990 Candidatus Pantoea carbekii 0.00 2 0 G1 1654067 Pantoea agglomerans group 0.00 2 2 S 549 Pantoea agglomerans 0.00 1 1 S 66269 Pantoea stewartii 0.00 1 1 S 470931 Pantoea anthophila 0.00 1 1 S 2364647 Pantoea piersonii 0.00 1 1 S 553 Pantoea ananatis 0.00 1 0 G 32199 Buchnera 0.00 1 0 S 9 Buchnera aphidicola 0.00 1 1 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.08 86 0 F 2812006 Bruguierivoracaceae 0.08 86 0 G 84565 Sodalis 0.08 82 82 S 2697027 Sodalis ligni 0.00 4 0 S 1486991 Candidatus Sodalis pierantonius 0.00 4 4 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.03 29 19 F 1903410 Pectobacteriaceae 0.01 6 0 G 122277 Pectobacterium 0.01 6 5 S 1905730 Pectobacterium parmentieri 0.00 1 1 S1 561231 Pectobacterium parmentieri WPP163 0.00 4 0 G 204037 Dickeya 0.00 2 2 S 204039 Dickeya dianthicola 0.00 2 2 S 1089444 Dickeya solani 0.02 16 0 F 1903414 Morganellaceae 0.01 8 0 G 581 Morganella 0.01 8 8 S 582 Morganella morganii 0.01 7 0 G 637 Arsenophonus 0.00 5 5 S 638 Arsenophonus nasoniae 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.00 1 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 1 0 G 586 Providencia 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.00 3 0 F 1903412 Hafniaceae 0.00 3 3 G 568 Hafnia 0.24 242 0 O 72274 Pseudomonadales 0.23 241 3 F 135621 Pseudomonadaceae 0.22 229 160 G 286 Pseudomonas 0.02 17 0 G1 136841 Pseudomonas aeruginosa group 0.02 17 17 S 287 Pseudomonas aeruginosa 0.01 14 2 G1 196821 unclassified Pseudomonas 0.00 2 2 S 2762896 Pseudomonas sp. MPDS 0.00 2 2 S 2892442 Pseudomonas sp. CIP-10 0.00 2 2 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 3139142 Pseudomonas sp. RC10 0.00 1 1 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 1 1 S 2986947 Pseudomonas sp. WJP1 0.00 1 1 S 2931382 Pseudomonas sp. PIA16 0.00 1 1 S 2954094 Pseudomonas sp. FP453 0.00 1 1 S 2954092 Pseudomonas sp. FP2335 0.01 13 0 G1 136843 Pseudomonas fluorescens group 0.01 10 2 S 47883 Pseudomonas synxantha 0.01 8 8 S1 96901 Pseudomonas synxantha BG33R 0.00 2 2 S 47878 Pseudomonas azotoformans 0.00 1 1 S 651740 Pseudomonas cedrina 0.01 9 9 S 2738125 Pseudomonas hefeiensis 0.01 7 0 G1 136845 Pseudomonas putida group 0.00 4 4 S 78327 Pseudomonas mosselii 0.00 3 3 S 303 Pseudomonas putida 0.00 3 3 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 2 2 S 46677 Pseudomonas agarici 0.00 2 2 S 158627 Pseudomonas graminis 0.00 1 1 S 2219225 Pseudomonas asiatica 0.00 1 1 S 2745490 Pseudomonas xantholysinigenes 0.01 8 0 G 2901164 Stutzerimonas 0.01 8 0 G1 136846 Stutzerimonas stutzeri group 0.01 8 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 8 8 S 316 Stutzerimonas stutzeri 0.00 1 0 G 2901189 Halopseudomonas 0.00 1 1 S 797277 Halopseudomonas litoralis 0.00 1 0 F 3085095 Pseudohongiellaceae 0.00 1 0 G 1524249 Pseudohongiella 0.00 1 1 S 1249552 Pseudohongiella spirulinae 0.13 130 0 O 1240482 Orbales 0.13 130 0 F 1240483 Orbaceae 0.13 130 0 G 2894762 Zophobihabitans 0.13 130 130 S 1635327 Zophobihabitans entericus 0.13 130 0 O 135622 Alteromonadales 0.12 122 0 F 267888 Pseudoalteromonadaceae 0.11 112 0 G 2834759 Flocculibacter 0.11 112 112 S 2744479 Flocculibacter collagenilyticus 0.01 10 2 G 53246 Pseudoalteromonas 0.01 6 0 G1 194690 unclassified Pseudoalteromonas 0.01 6 6 S 649161 Pseudoalteromonas sp. 3J6 0.00 2 2 S 43657 Pseudoalteromonas luteoviolacea 0.00 4 0 F 267890 Shewanellaceae 0.00 4 0 G 22 Shewanella 0.00 4 1 G1 196818 unclassified Shewanella 0.00 2 2 S 2590015 Shewanella sp. SNU WT4 0.00 1 1 S 2991940 Shewanella sp. DAU305 0.00 3 0 F 72275 Alteromonadaceae 0.00 3 0 F1 2903219 Alteromonas/Salinimonas group 0.00 3 0 G 226 Alteromonas 0.00 2 0 G1 2614992 unclassified Alteromonas 0.00 2 2 S 2267264 Alteromonas sp. RKMC-009 0.00 1 1 S 314275 Alteromonas mediterranea 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 135575 Idiomarina 0.00 1 0 G1 2614829 unclassified Idiomarina 0.00 1 1 S 2055892 Idiomarina sp. X4 0.09 95 0 O 2887326 Moraxellales 0.09 95 0 F 468 Moraxellaceae 0.08 80 7 G 469 Acinetobacter 0.02 23 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.02 21 17 S 470 Acinetobacter baumannii 0.00 4 4 S1 1279013 Acinetobacter baumannii PR07 0.00 2 2 S 48296 Acinetobacter pittii 0.02 22 0 S 52133 Acinetobacter venetianus 0.02 22 22 S1 1197884 Acinetobacter venetianus VE-C3 0.01 10 10 S 756892 Acinetobacter indicus 0.01 10 10 S 202956 Acinetobacter towneri 0.01 7 7 S 40214 Acinetobacter johnsonii 0.00 1 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.01 14 13 G 475 Moraxella 0.00 1 1 S 34061 Moraxella cuniculi 0.00 1 0 G 497 Psychrobacter 0.00 1 1 G1 196806 unclassified Psychrobacter 0.08 82 0 O 135623 Vibrionales 0.08 82 38 F 641 Vibrionaceae 0.04 36 16 G 662 Vibrio 0.01 9 9 S 666 Vibrio cholerae 0.00 5 0 G1 717610 Vibrio harveyi group 0.00 3 3 S 669 Vibrio harveyi 0.00 2 2 S 670 Vibrio parahaemolyticus 0.00 4 0 S 52443 Vibrio tapetis 0.00 4 4 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2572923 Vibrio taketomensis 0.01 6 1 G 657 Photobacterium 0.00 3 3 S 553611 Photobacterium leiognathi 0.00 2 0 G1 2628852 unclassified Photobacterium 0.00 2 2 S 2912855 Photobacterium sp. CCB-ST2H9 0.00 2 0 G 511678 Aliivibrio 0.00 1 0 S 668 Aliivibrio fischeri 0.00 1 1 S1 1088719 Aliivibrio fischeri SR5 0.00 1 0 S 40269 Aliivibrio salmonicida 0.00 1 1 S1 316275 Aliivibrio salmonicida LFI1238 0.07 76 0 O 135619 Oceanospirillales 0.04 39 2 F 135620 Oceanospirillaceae 0.03 27 0 G 267849 Nitrincola 0.03 27 27 S 2614693 Nitrincola iocasae 0.01 8 0 G 28253 Marinomonas 0.01 8 8 S 2773454 Marinomonas algicola 0.00 2 1 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.03 31 2 F 28256 Halomonadaceae 0.02 16 0 G 2745 Halomonas 0.01 11 11 S 3031727 Halomonas piscis 0.00 5 3 G1 2609666 unclassified Halomonas 0.00 1 1 S 2982694 Halomonas sp. LR3S48 0.00 1 1 S 2306583 Halomonas sp. JS92-SW72 0.01 12 0 F1 114403 Zymobacter group 0.01 10 0 G 33073 Zymobacter 0.01 10 10 S 33074 Zymobacter palmae 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 0 S 114186 Candidatus Carsonella ruddii 0.00 1 1 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.00 1 0 G 235572 Candidatus Portiera 0.00 1 1 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 204286 Cobetia 0.00 1 0 G1 2609414 unclassified Cobetia 0.00 1 1 S 3105867 Cobetia sp. D5 0.00 5 0 F 2823145 Pleioneaceae 0.00 5 0 G 1502941 Pleionea 0.00 5 5 S 3070815 Pleionea litopenaei 0.00 1 0 F 255527 Saccharospirillaceae 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.07 68 0 O 135615 Cardiobacteriales 0.07 68 0 F 868 Cardiobacteriaceae 0.06 66 0 G 13275 Suttonella 0.06 66 0 G1 2908647 unclassified Suttonella 0.06 66 66 S 2908648 Suttonella sp. R2A3 0.00 2 0 G 869 Dichelobacter 0.00 2 2 S 870 Dichelobacter nodosus 0.05 50 0 O 135618 Methylococcales 0.05 49 1 F 403 Methylococcaceae 0.05 47 0 G 39773 Methylomicrobium 0.05 47 0 S 39775 Methylomicrobium album 0.05 47 47 S1 686340 Methylomicrobium album BG8 0.00 1 0 G 3135206 Candidatus Methylocalor 0.00 1 1 S 3108543 Candidatus Methylocalor cossyra 0.00 1 0 F 1486721 Methylothermaceae 0.00 1 0 G 1486720 Methylomarinovum 0.00 1 1 S 2840183 Methylomarinovum tepidoasis 0.04 38 0 O 135625 Pasteurellales 0.04 38 2 F 712 Pasteurellaceae 0.03 30 2 G 724 Haemophilus 0.02 23 23 S 727 Haemophilus influenzae 0.00 5 5 S 729 Haemophilus parainfluenzae 0.00 3 0 G 713 Actinobacillus 0.00 3 0 S 718 Actinobacillus equuli 0.00 3 3 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 0 G 745 Pasteurella 0.00 1 1 S 747 Pasteurella multocida 0.00 1 0 G 2094023 Glaesserella 0.00 1 0 G1 2629322 unclassified Glaesserella 0.00 1 1 S 2030797 Glaesserella sp. 15-184 0.00 1 0 G 476528 Bibersteinia 0.00 1 1 S 47735 Bibersteinia trehalosi 0.02 22 0 O 135624 Aeromonadales 0.02 21 1 F 84642 Aeromonadaceae 0.01 13 0 G 43947 Tolumonas 0.01 12 0 G1 263764 environmental samples 0.01 12 12 S 263765 uncultured Tolumonas sp. 0.00 1 1 S 43948 Tolumonas auensis 0.00 4 0 G 642 Aeromonas 0.00 3 3 S 654 Aeromonas veronii 0.00 1 0 G1 257493 unclassified Aeromonas 0.00 1 1 S 2778064 Aeromonas sp. FDAARGOS 1415 0.00 3 0 G 225143 Oceanisphaera 0.00 3 3 S 1903694 Oceanisphaera avium 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.01 11 0 O 72273 Thiotrichales 0.00 5 0 F 135617 Thiotrichaceae 0.00 5 5 G 1030 Thiothrix 0.00 3 0 F 2056687 Fastidiosibacteraceae 0.00 3 0 G 2056696 Cysteiniphilum 0.00 3 0 G1 2610889 unclassified Cysteiniphilum 0.00 3 3 S 2975055 Cysteiniphilum sp. QT6929 0.00 2 0 F 135616 Piscirickettsiaceae 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 1 G 34067 Cycloclasticus 0.00 1 1 F 34064 Francisellaceae 0.01 11 0 O 2975284 Candidatus Comchoanobacterales 0.01 11 0 F 2975285 Candidatus Comchoanobacteraceae 0.01 11 0 G 2975286 Candidatus Comchoanobacter 0.01 11 11 S 2919598 Candidatus Comchoanobacter bicostacola 0.01 11 0 O 135613 Chromatiales 0.01 11 3 F 1046 Chromatiaceae 0.00 5 5 G 1056 Thiocapsa 0.00 2 2 G 1227 Nitrosococcus 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.01 6 0 O 1706369 Cellvibrionales 0.00 4 0 F 1706371 Cellvibrionaceae 0.00 3 0 G 2425 Teredinibacter 0.00 3 3 S 2731755 Teredinibacter haidensis 0.00 1 0 G 447467 Simiduia 0.00 1 0 G1 2639280 unclassified Simiduia 0.00 1 1 S 2909669 Simiduia sp. 21SJ11W-1 0.00 1 1 F 1706372 Halieaceae 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.01 6 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 3 0 C2 32036 sulfur-oxidizing symbionts 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 2 2 S 2738852 Candidatus Ruthia endofausta 0.00 1 0 G 2686004 Candidatus Vondammii 0.00 1 0 G1 2687300 unclassified Candidatus Vondammii 0.00 1 1 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 2 0 G 1076625 Candidatus Steffania 0.00 2 2 S 1076626 Candidatus Steffania adelgidicola 0.00 1 0 G 198346 Candidatus Palibaumannia 0.00 1 1 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 4 0 O 118969 Legionellales 0.00 4 1 F 118968 Coxiellaceae 0.00 2 0 F1 134284 unclassified Coxiellaceae 0.00 2 2 S 1592897 Coxiella-like endosymbiont 0.00 1 0 G 776 Coxiella 0.00 1 1 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.59 610 11 C 28216 Betaproteobacteria 0.56 571 6 O 80840 Burkholderiales 0.39 396 35 F 75682 Oxalobacteraceae 0.20 202 3 G 401469 Undibacterium 0.19 199 41 G1 2630295 unclassified Undibacterium 0.15 158 158 S 3048609 Undibacterium sp. CCC3.4 0.11 111 96 G 29580 Janthinobacterium 0.01 15 3 G1 2610881 unclassified Janthinobacterium 0.01 8 8 S 3065910 Janthinobacterium sp. J1-1 0.00 2 2 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 1644131 Janthinobacterium sp. 1_2014MBL_MicDiv 0.00 1 1 S 2985511 Janthinobacterium sp. TB1-E2 0.04 43 14 F1 2895353 Telluria group 0.03 28 2 G 149698 Massilia 0.01 15 15 S 457921 Massilia varians 0.01 11 11 S 945844 Massilia oculi 0.00 1 1 G 75654 Duganella 0.00 4 0 G 884214 Candidatus Zinderia 0.00 4 0 G1 3077950 unclassified Candidatus Zinderia 0.00 4 4 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 1 0 G 1229970 Glaciimonas 0.00 1 0 G1 2644401 unclassified Glaciimonas 0.00 1 1 S 2807626 Glaciimonas sp. PAMC28666 0.13 132 1 F 119060 Burkholderiaceae 0.08 87 1 G 48736 Ralstonia 0.08 86 0 G1 3116862 Ralstonia solanacearum species complex 0.08 86 86 S 305 Ralstonia solanacearum 0.03 33 0 G 32008 Burkholderia 0.03 29 0 G1 87882 Burkholderia cepacia complex 0.02 21 19 S 152500 Burkholderia dolosa 0.00 2 2 S1 1385930 Burkholderia dolosa PC543 0.01 6 6 S 87883 Burkholderia multivorans 0.00 2 2 S 95485 Burkholderia stabilis 0.00 4 0 G1 111527 pseudomallei group 0.00 3 0 S 28450 Burkholderia pseudomallei 0.00 3 3 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S 57975 Burkholderia thailandensis 0.01 6 0 G 44013 Polynucleobacter 0.01 6 6 S 576610 Polynucleobacter necessarius 0.00 3 1 G 106589 Cupriavidus 0.00 1 1 S 96344 Cupriavidus oxalaticus 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 1 S 169430 Paraburkholderia hospita 0.00 1 0 G 2038280 Robbsia 0.00 1 1 S 28092 Robbsia andropogonis 0.03 29 2 F 80864 Comamonadaceae 0.01 13 13 G 80865 Delftia 0.01 9 0 G 283 Comamonas 0.01 9 9 S 2743470 Comamonas antarctica 0.00 4 3 G 34072 Variovorax 0.00 1 1 S 34073 Variovorax paradoxus 0.00 1 0 G 1649468 Melaminivora 0.00 1 1 S 2109913 Melaminivora suipulveris 0.01 6 0 F 506 Alcaligenaceae 0.00 3 3 G 507 Alcaligenes 0.00 1 0 G 290425 Advenella 0.00 1 1 S 1481665 Advenella alkanexedens 0.00 1 0 G 29574 Taylorella 0.00 1 1 S 29575 Taylorella equigenitalis 0.00 1 0 G 517 Bordetella 0.00 1 1 S 35814 Bordetella holmesii 0.00 1 0 O1 224471 Burkholderiales genera incertae sedis 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.00 1 0 F 2975441 Sphaerotilaceae 0.00 1 0 G 196013 Caldimonas 0.00 1 1 S 215580 Caldimonas thermodepolymerans 0.02 16 3 O 206351 Neisseriales 0.01 8 3 F 481 Neisseriaceae 0.00 5 3 G 482 Neisseria 0.00 2 2 S 485 Neisseria gonorrhoeae 0.00 3 0 F 2897176 Aquaspirillaceae 0.00 2 0 G 57479 Microvirgula 0.00 2 2 S 57480 Microvirgula aerodenitrificans 0.00 1 0 G 168470 Laribacter 0.00 1 1 S 168471 Laribacter hongkongensis 0.00 2 0 F 1499392 Chromobacteriaceae 0.00 2 0 G 57739 Vogesella 0.00 2 0 G1 2684990 unclassified Vogesella 0.00 2 2 S 1192162 Vogesella sp. LIG4 0.00 5 1 O 32003 Nitrosomonadales 0.00 2 2 F 206379 Nitrosomonadaceae 0.00 2 0 F 2008793 Sterolibacteriaceae 0.00 1 0 G 1054211 Sulfuritalea 0.00 1 0 S 748811 Sulfuritalea hydrogenivorans 0.00 1 1 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.00 1 0 G 3050898 Sulfuricystis 0.00 1 1 S 2496847 Sulfuricystis thermophila 0.00 4 0 C1 119066 Betaproteobacteria incertae sedis 0.00 4 0 G 1301080 Candidatus Nasuia 0.00 4 4 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 3 0 O 206389 Rhodocyclales 0.00 3 0 F 2008795 Azonexaceae 0.00 3 0 G 88875 Ferribacterium 0.00 3 3 S 76259 Ferribacterium limneticum 0.00 2 0 C 1807140 Acidithiobacillia 0.00 2 0 O 225057 Acidithiobacillales 0.00 2 0 F 225058 Acidithiobacillaceae 0.00 2 2 G 119977 Acidithiobacillus 10.08 10354 3241 D1 1783272 Terrabacteria group 4.42 4542 88 P 1239 Bacillota 3.79 3897 83 C 91061 Bacilli 1.99 2042 27 O 1385 Bacillales 1.57 1613 8 F 186817 Bacillaceae 1.39 1425 0 G 84406 Virgibacillus 1.39 1425 1425 S 447199 Virgibacillus salarius 0.15 152 23 G 1386 Bacillus 0.06 65 2 G1 653685 Bacillus subtilis group 0.06 60 1 G2 1938374 Bacillus amyloliquefaciens group 0.05 47 46 S 492670 Bacillus velezensis 0.00 1 1 S1 1458206 Bacillus velezensis NJN-6 0.01 12 12 S 1390 Bacillus amyloliquefaciens 0.00 3 2 S 1423 Bacillus subtilis 0.00 1 1 S1 135461 Bacillus subtilis subsp. subtilis 0.04 43 3 G1 86661 Bacillus cereus group 0.02 17 17 S 1392 Bacillus anthracis 0.01 10 6 S 1396 Bacillus cereus 0.00 2 2 S1 1003239 Bacillus cereus C1L 0.00 1 1 S1 1454382 Bacillus cereus D17 0.00 1 1 S1 526991 Bacillus cereus AH676 0.01 9 7 S 1428 Bacillus thuringiensis 0.00 1 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 1 1 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 1 1 S1 412694 Bacillus thuringiensis str. Al Hakam 0.00 3 0 G2 2750818 unclassified Bacillus cereus group 0.00 3 3 S 1892404 Bacillus sp. ABP14 0.00 1 1 S 2026191 Bacillus luti 0.02 19 0 G1 1792192 Bacillus altitudinis complex 0.02 19 19 S 293387 Bacillus altitudinis 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 467262 Bacillus sp. T3 0.00 1 1 S 1408 Bacillus pumilus 0.01 8 0 G 175304 Lentibacillus 0.01 8 8 S 1472767 Lentibacillus amyloliquefaciens 0.01 8 4 G 2800373 Priestia 0.00 3 3 S 1404 Priestia megaterium 0.00 1 1 S 412384 Priestia aryabhattai 0.00 4 0 G 2893057 Shouchella 0.00 3 3 S 79880 Shouchella clausii 0.00 1 0 S 300825 Shouchella lehensis 0.00 1 1 S1 1246626 Shouchella lehensis G1 0.00 3 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 3 0 S 86665 Halalkalibacterium halodurans 0.00 3 3 S1 272558 Halalkalibacterium halodurans C-125 0.00 1 0 G 2675233 Metabacillus 0.00 1 1 G1 2675274 unclassified Metabacillus 0.00 1 0 G 2675229 Peribacillus 0.00 1 1 S 228899 Peribacillus asahii 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.00 1 0 G 400634 Lysinibacillus 0.00 1 0 G1 2636778 unclassified Lysinibacillus 0.00 1 1 S 2921718 Lysinibacillus sp. FSL M8-0337 0.00 1 0 G 459532 Terribacillus 0.00 1 0 G1 2636508 unclassified Terribacillus 0.00 1 1 S 2921447 Terribacillus sp. FSL K6-0262 0.32 331 1 F 90964 Staphylococcaceae 0.32 329 33 G 1279 Staphylococcus 0.21 216 214 S 1280 Staphylococcus aureus 0.00 1 1 S1 273036 Staphylococcus aureus RF122 0.00 1 1 S1 1229492 Staphylococcus aureus 08BA02176 0.03 33 33 S 1282 Staphylococcus epidermidis 0.02 19 19 S 28035 Staphylococcus lugdunensis 0.01 8 8 S 70255 Staphylococcus condimenti 0.00 3 3 S 29388 Staphylococcus capitis 0.00 3 3 S 29382 Staphylococcus cohnii 0.00 3 3 S 2044912 Staphylococcus debuckii 0.00 3 3 S 1290 Staphylococcus hominis 0.00 2 2 S 1286 Staphylococcus simulans 0.00 2 2 S 1283 Staphylococcus haemolyticus 0.00 1 0 G1 2815305 Staphylococcus intermedius group 0.00 1 1 S 283734 Staphylococcus pseudintermedius 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2989772 Staphylococcus sp. IVB6246 0.00 1 1 S 94138 Staphylococcus ureilyticus 0.00 1 1 S 985002 Staphylococcus argenteus 0.00 1 0 G 2803850 Mammaliicoccus 0.00 1 1 S 1296 Mammaliicoccus sciuri 0.04 39 0 F 186822 Paenibacillaceae 0.04 36 0 G 44249 Paenibacillus 0.03 26 1 G1 185978 unclassified Paenibacillus 0.01 8 8 S 2741301 Paenibacillus sp. URB8-2 0.01 7 7 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 5 5 S 715179 Paenibacillus sp. sptzw28 0.00 3 3 S 324057 Paenibacillus sp. JDR-2 0.00 1 1 S 2954679 Paenibacillus sp. FSL K6-2441 0.00 1 1 S 2211212 Paenibacillus sp. DCT19 0.01 8 1 S 1406 Paenibacillus polymyxa 0.00 4 4 S1 886882 Paenibacillus polymyxa SC2 0.00 3 3 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 1 1 S 2509456 Paenibacillus protaetiae 0.00 1 1 S 79263 Paenibacillus chitinolyticus 0.00 2 0 F1 85151 Aneurinibacillus group 0.00 2 1 G 55079 Aneurinibacillus 0.00 1 1 S 1500254 Aneurinibacillus soli 0.00 1 0 G 329857 Cohnella 0.00 1 1 S 2507935 Cohnella abietis 0.02 19 0 F 186820 Listeriaceae 0.02 17 2 G 1637 Listeria 0.01 11 0 S 1638 Listeria ivanovii 0.01 11 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.01 11 11 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 2 0 G1 2642072 unclassified Listeria 0.00 2 2 S 1844999 Listeria sp. PSOL-1 0.00 1 1 S 1639 Listeria monocytogenes 0.00 1 1 S 1497681 Listeria newyorkensis 0.00 2 0 G 2755 Brochothrix 0.00 2 2 S 2756 Brochothrix thermosphacta 0.00 5 0 F 186818 Planococcaceae 0.00 3 0 G 160795 Ureibacillus 0.00 2 2 S 367743 Ureibacillus thermophilus 0.00 1 1 S 51173 Ureibacillus thermosphaericus 0.00 1 1 G 1372 Planococcus 0.00 1 0 G 651660 Paenisporosarcina 0.00 1 1 S 2320858 Paenisporosarcina cavernae 0.00 5 0 F 186823 Alicyclobacillaceae 0.00 5 0 G 29330 Alicyclobacillus 0.00 5 5 S 2931921 Alicyclobacillus mengziensis 0.00 2 0 F 186821 Sporolactobacillaceae 0.00 2 1 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 1 F 186824 Thermoactinomycetaceae 1.73 1772 13 O 186826 Lactobacillales 1.07 1098 0 F 81852 Enterococcaceae 1.07 1095 1 G 1350 Enterococcus 1.03 1056 1056 S 1351 Enterococcus faecalis 0.03 33 33 S 1352 Enterococcus faecium 0.00 4 2 S 1354 Enterococcus hirae 0.00 2 2 S1 768486 Enterococcus hirae ATCC 9790 0.00 1 1 S 44008 Enterococcus cecorum 0.00 3 0 G 51668 Tetragenococcus 0.00 3 3 S 51669 Tetragenococcus halophilus 0.51 524 0 F 1300 Streptococcaceae 0.51 523 61 G 1301 Streptococcus 0.43 438 435 S 1308 Streptococcus thermophilus 0.00 2 2 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 767463 Streptococcus thermophilus ND03 0.01 6 6 S 2490633 Streptococcus periodonticum 0.00 5 4 S 1311 Streptococcus agalactiae 0.00 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 3 3 S 1314 Streptococcus pyogenes 0.00 2 2 S 1313 Streptococcus pneumoniae 0.00 2 2 S 1341 Streptococcus ratti 0.00 2 2 S 68892 Streptococcus infantis 0.00 1 1 S 1811193 Streptococcus pantholopis 0.00 1 1 S 1305 Streptococcus sanguinis 0.00 1 1 S 361101 Streptococcus pseudoporcinus 0.00 1 1 S 1111760 Streptococcus troglodytae 0.00 1 0 G 1357 Lactococcus 0.00 1 0 S 1363 Lactococcus garvieae 0.00 1 1 S1 1890280 Lactococcus garvieae subsp. garvieae 0.12 119 10 F 33958 Lactobacillaceae 0.04 43 43 G 2767889 Loigolactobacillus 0.01 12 0 G 2767887 Ligilactobacillus 0.01 10 10 S 89059 Ligilactobacillus acidipiscis 0.00 1 1 S 1606 Ligilactobacillus aviarius 0.00 1 1 S 1624 Ligilactobacillus salivarius 0.01 8 4 G 46255 Weissella 0.00 4 4 S 1249 Weissella paramesenteroides 0.01 8 0 G 2767842 Lactiplantibacillus 0.01 6 6 S 1590 Lactiplantibacillus plantarum 0.00 2 2 S 1589 Lactiplantibacillus pentosus 0.01 7 0 G 2742598 Limosilactobacillus 0.01 6 6 S 1613 Limosilactobacillus fermentum 0.00 1 1 S 2742601 Limosilactobacillus portuensis 0.01 6 0 G 2759736 Lacticaseibacillus 0.00 3 2 S 1597 Lacticaseibacillus paracasei 0.00 1 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 1 1 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.00 2 2 S 88233 Lacticaseibacillus manihotivorans 0.00 1 1 S 3025672 Lacticaseibacillus pabuli 0.01 6 0 G 2767886 Levilactobacillus 0.00 5 5 S 1580 Levilactobacillus brevis 0.00 1 1 S 267363 Levilactobacillus zymae 0.00 5 4 G 1578 Lactobacillus 0.00 1 0 G1 2620435 unclassified Lactobacillus 0.00 1 1 S 1545702 Lactobacillus sp. wkB8 0.00 3 2 G 1243 Leuconostoc 0.00 1 1 S 1246 Leuconostoc lactis 0.00 2 0 G 1253 Pediococcus 0.00 1 1 S 1255 Pediococcus pentosaceus 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.00 2 1 G 2767877 Apilactobacillus 0.00 1 1 S 1218495 Apilactobacillus apinorum 0.00 2 0 G 2930384 Periweissella 0.00 2 2 S 2506420 Periweissella cryptocerci 0.00 1 0 G 2767888 Liquorilactobacillus 0.00 1 1 S 82688 Liquorilactobacillus nagelii 0.00 1 1 G 2767890 Paucilactobacillus 0.00 1 1 G 2767893 Lentilactobacillus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.00 1 1 G 46254 Oenococcus 0.01 10 0 F 186828 Carnobacteriaceae 0.01 9 0 G 117563 Granulicatella 0.01 6 6 S 46124 Granulicatella adiacens 0.00 3 3 S 137732 Granulicatella elegans 0.00 1 0 G 2747 Carnobacterium 0.00 1 0 S 2751 Carnobacterium maltaromaticum 0.00 1 1 S1 1234679 Carnobacterium maltaromaticum LMA28 0.01 8 0 F 186827 Aerococcaceae 0.00 5 3 G 1375 Aerococcus 0.00 2 2 S 87541 Aerococcus christensenii 0.00 2 0 G 66831 Facklamia 0.00 2 2 S 178214 Facklamia hominis 0.00 1 0 G 2862144 Ruoffia 0.00 1 1 S 87458 Ruoffia tabacinasalis 0.44 455 7 C 186801 Clostridia 0.24 247 165 O 186802 Eubacteriales 0.03 32 22 F 31984 Heliobacteriaceae 0.01 10 0 G 79598 Heliorestis 0.01 10 10 S 356322 Heliorestis convoluta 0.02 21 1 F 31979 Clostridiaceae 0.02 20 1 G 1485 Clostridium 0.01 6 0 S 1491 Clostridium botulinum 0.01 6 6 S1 1408283 Clostridium botulinum CDC_1436 0.00 4 0 G1 2614128 unclassified Clostridium 0.00 4 4 S 3070996 Clostridium sp. MB40-C1 0.00 4 4 S 1502 Clostridium perfringens 0.00 3 0 S 1493 Clostridium cellulovorans 0.00 3 3 S1 573061 Clostridium cellulovorans 743B 0.00 1 1 S 36839 Clostridium felsineum 0.00 1 1 S 1716543 Clostridium thermarum 0.01 15 0 F 216572 Oscillospiraceae 0.01 7 5 G 216851 Faecalibacterium 0.00 2 2 S 853 Faecalibacterium prausnitzii 0.00 2 2 G 2892396 Vescimonas 0.00 2 0 G 459786 Oscillibacter 0.00 2 2 S 2763056 Oscillibacter hominis 0.00 2 0 G 1263 Ruminococcus 0.00 1 1 S 2564099 Ruminococcus bovis 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.00 1 0 G 253238 Ethanoligenens 0.00 1 1 S 253239 Ethanoligenens harbinense 0.00 1 0 G 2304687 Petroclostridium 0.00 1 0 G1 2619260 unclassified Petroclostridium 0.00 1 1 S 3045146 Petroclostridium sp. X23 0.01 6 0 O1 538999 Eubacteriales incertae sedis 0.01 6 0 G 1686313 Fenollaria 0.01 6 6 S 938288 Fenollaria massiliensis 0.00 4 0 F 3046368 Aristaeellaceae 0.00 4 4 G 3046369 Aristaeella 0.00 3 0 F 1491775 Proteinivoraceae 0.00 3 3 G 1491776 Proteinivorax 0.00 1 0 F 186807 Peptococcaceae 0.00 1 0 G 2924872 Acididesulfobacillus 0.00 1 1 S 1561005 Acididesulfobacillus acetoxydans 0.16 162 0 O 53433 Halanaerobiales 0.15 159 0 F 53434 Halobacteroidaceae 0.15 158 0 G 42417 Halobacteroides 0.15 158 0 S 42422 Halobacteroides halobius 0.15 158 158 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 3 0 O1 387655 Halanaerobiales incertae sedis 0.00 3 0 G 1769008 Anoxybacter 0.00 3 3 S 1323375 Anoxybacter fermentans 0.02 22 0 O 3085636 Lachnospirales 0.02 22 0 F 186803 Lachnospiraceae 0.01 6 0 G 572511 Blautia 0.00 5 0 S 40520 Blautia obeum 0.00 5 5 S1 657314 Blautia obeum A2-162 0.00 1 0 G1 2648079 unclassified Blautia 0.00 1 1 S 2479767 Blautia sp. SC05B48 0.00 4 0 G 2316020 Mediterraneibacter 0.00 2 2 S 33038 Mediterraneibacter gnavus 0.00 2 0 S 33039 [Ruminococcus] torques 0.00 2 2 S1 657313 [Ruminococcus] torques L2-14 0.00 3 1 G 1164882 Lachnoanaerobaculum 0.00 2 2 S 2490855 Lachnoanaerobaculum gingivalis 0.00 2 0 G 189330 Dorea 0.00 2 2 S 88431 Dorea longicatena 0.00 2 0 G 830 Butyrivibrio 0.00 2 2 S 831 Butyrivibrio fibrisolvens 0.00 1 0 G 207244 Anaerostipes 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.00 1 1 G 1843210 Anaerocolumna 0.00 1 0 G 3076670 Claveliimonas 0.00 1 1 S 3028070 Claveliimonas bilis 0.00 1 0 G 1213720 Stomatobaculum 0.00 1 0 G1 2643635 unclassified Stomatobaculum 0.00 1 1 S 3059030 Stomatobaculum sp. F0698 0.00 1 0 G 3031933 Chordicoccus 0.00 1 1 S 2709410 Chordicoccus furentiruminis 0.02 17 0 O 3082720 Peptostreptococcales 0.01 11 1 F 186804 Peptostreptococcaceae 0.00 5 0 G 1870884 Clostridioides 0.00 5 5 S 1496 Clostridioides difficile 0.00 3 0 G 1505657 Intestinibacter 0.00 3 3 S 261299 Intestinibacter bartlettii 0.00 2 0 G 1501226 Romboutsia 0.00 2 2 S 1507512 Romboutsia hominis 0.00 4 0 F 3030910 Anaerovoracaceae 0.00 4 4 G 86331 Mogibacterium 0.00 2 0 F 3118654 Caminicellaceae 0.00 2 0 G 166484 Caminicella 0.00 2 2 S 166485 Caminicella sporogenes 0.07 68 0 C 1737404 Tissierellia 0.07 68 0 O 1737405 Tissierellales 0.07 67 0 F 1570339 Peptoniphilaceae 0.05 51 3 G 165779 Anaerococcus 0.03 28 0 S 33034 Anaerococcus prevotii 0.03 28 28 S1 525919 Anaerococcus prevotii DSM 20548 0.01 11 11 S 1755241 Anaerococcus nagyae 0.01 7 0 G1 2614126 unclassified Anaerococcus 0.01 7 7 S 3036300 Anaerococcus sp. Marseille-Q7828 0.00 2 2 S 1870984 Anaerococcus mediterraneensis 0.01 6 0 G 150022 Finegoldia 0.01 6 6 S 1260 Finegoldia magna 0.01 6 0 G 162289 Peptoniphilus 0.00 3 3 S 54006 Peptoniphilus ivorii 0.00 2 2 S 54005 Peptoniphilus harei 0.00 1 1 S 3036303 Peptoniphilus genitalis 0.00 4 0 G 1161127 Murdochiella 0.00 4 4 S 1852373 Murdochiella vaginalis 0.00 1 0 F 1737406 Tissierellaceae 0.00 1 0 G 41273 Tissierella 0.00 1 0 G1 2638726 unclassified Tissierella 0.00 1 1 S 3070999 Tissierella sp. MB52-C2 0.03 28 0 C 909932 Negativicutes 0.03 27 0 O 1843489 Veillonellales 0.03 27 0 F 31977 Veillonellaceae 0.02 19 7 G 29465 Veillonella 0.01 7 7 S 39777 Veillonella atypica 0.00 4 4 S 29466 Veillonella parvula 0.00 1 1 S 423477 Veillonella rogosae 0.01 7 0 G 906 Megasphaera 0.01 6 6 S 907 Megasphaera elsdenii 0.00 1 1 S 1675036 Megasphaera hexanoica 0.00 1 0 G 39948 Dialister 0.00 1 1 S 39950 Dialister pneumosintes 0.00 1 0 O 909929 Selenomonadales 0.00 1 0 F 1843491 Selenomonadaceae 0.00 1 0 G 864 Pectinatus 0.00 1 1 S 865 Pectinatus frisingensis 0.01 6 0 C 526524 Erysipelotrichia 0.01 6 0 O 526525 Erysipelotrichales 0.01 6 1 F 128827 Erysipelotrichaceae 0.00 3 0 G 123375 Solobacterium 0.00 3 3 S 102148 Solobacterium moorei 0.00 1 0 G 174708 Allobaculum 0.00 1 1 S 2834459 Allobaculum mucilyticum 0.00 1 0 G 1729679 Faecalibaculum 0.00 1 1 S 1702221 Faecalibaculum rodentium 1.16 1192 4 P 201174 Actinomycetota 1.10 1132 58 C 1760 Actinomycetes 0.40 409 12 O 85006 Micrococcales 0.18 183 0 F 2805591 Tropherymataceae 0.18 183 0 G 2038 Tropheryma 0.18 183 183 S 2039 Tropheryma whipplei 0.10 106 5 F 1268 Micrococcaceae 0.04 45 0 G 1742989 Glutamicibacter 0.04 38 0 G1 2627139 unclassified Glutamicibacter 0.04 38 38 S 1155384 Glutamicibacter sp. ZJUTW 0.01 7 7 S 37929 Glutamicibacter nicotianae 0.03 33 1 G 32207 Rothia 0.02 17 17 S 2047 Rothia dentocariosa 0.01 10 10 S 43675 Rothia mucilaginosa 0.00 5 5 S 172042 Rothia aeria 0.01 11 7 G 57493 Kocuria 0.00 4 4 S 71999 Kocuria palustris 0.00 5 0 G 1663 Arthrobacter 0.00 5 0 G1 235627 unclassified Arthrobacter 0.00 2 2 S 2828862 Arthrobacter sp. Helios 0.00 2 2 S 2600159 Arthrobacter sp. UKPF54-2 0.00 1 1 S 2830998 Arthrobacter sp. NicSoilB8 0.00 5 5 G 1269 Micrococcus 0.00 1 0 G 1742993 Pseudarthrobacter 0.00 1 0 G1 2647000 unclassified Pseudarthrobacter 0.00 1 1 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 1 G 1160973 Auritidibacter 0.05 54 37 F 85023 Microbacteriaceae 0.00 5 0 G 33877 Agromyces 0.00 4 4 S 2585717 Agromyces laixinhei 0.00 1 0 G1 2639701 unclassified Agromyces 0.00 1 1 S 3156399 Agromyces sp. G08B096 0.00 3 0 G 55968 Leucobacter 0.00 2 2 S 2873270 Leucobacter tenebrionis 0.00 1 1 S 340320 Leucobacter luti 0.00 3 0 G 255204 Pseudoclavibacter 0.00 3 0 G1 2615177 unclassified Pseudoclavibacter 0.00 3 3 S 2866588 Pseudoclavibacter sp. Marseille-Q3772 0.00 2 2 G 33886 Rathayibacter 0.00 1 0 G 33882 Microbacterium 0.00 1 1 S 582680 Microbacterium azadirachtae 0.00 1 0 G 3108736 Antiquaquibacter 0.00 1 1 S 2880260 Antiquaquibacter oligotrophicus 0.00 1 0 G 1434032 Pontimonas 0.00 1 1 S 1159327 Pontimonas salivibrio 0.00 1 0 F1 1655488 Luna cluster 0.00 1 0 F2 1655489 Luna-1 subcluster 0.00 1 1 G 529881 Aquiluna 0.04 40 0 F 85016 Cellulomonadaceae 0.04 39 0 G 1707 Cellulomonas 0.04 39 0 G1 2620175 unclassified Cellulomonas 0.04 39 39 S 2591145 Cellulomonas sp. Y8 0.00 1 0 G 458839 Actinotalea 0.00 1 0 G1 2638618 unclassified Actinotalea 0.00 1 1 S 2758442 Actinotalea sp. JY-7876 0.01 7 0 F 85020 Dermabacteraceae 0.01 7 7 G 43668 Brachybacterium 0.00 3 0 F 2805590 Ornithinimicrobiaceae 0.00 3 0 G 125287 Ornithinimicrobium 0.00 3 3 S 2283195 Ornithinimicrobium avium 0.00 2 0 F 85019 Brevibacteriaceae 0.00 2 1 G 1696 Brevibacterium 0.00 1 0 G1 2614124 unclassified Brevibacterium 0.00 1 1 S 2999062 Brevibacterium sp. BRM-1 0.00 1 0 F 1331736 Ruaniaceae 0.00 1 1 G 626119 Ruania 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 1 S 2509457 Xylanimonas protaetiae 0.36 365 2 O 85009 Propionibacteriales 0.34 351 17 F 31957 Propionibacteriaceae 0.31 322 4 G 1912216 Cutibacterium 0.30 306 306 S 1747 Cutibacterium acnes 0.01 12 12 S 33011 Cutibacterium granulosum 0.00 5 1 G 72763 Tessaracoccus 0.00 4 4 S 1285901 Tessaracoccus defluvii 0.00 3 0 G 2801844 Arachnia 0.00 3 3 S 1750 Arachnia propionica 0.00 2 0 G 1912215 Acidipropionibacterium 0.00 2 2 S 1749 Acidipropionibacterium jensenii 0.00 1 0 G 1743 Propionibacterium 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.00 1 0 G 1278221 Auraticoccus 0.00 1 1 S 675864 Auraticoccus monumenti 0.01 11 0 F 85015 Nocardioidaceae 0.01 9 0 G 1839 Nocardioides 0.00 3 3 S 3095075 Nocardioides renjunii 0.00 2 0 G1 2615069 unclassified Nocardioides 0.00 2 2 S 196162 Nocardioides sp. JS614 0.00 1 1 S 2518370 Nocardioides euryhalodurans 0.00 1 1 S 433659 Nocardioides mesophilus 0.00 1 1 S 2685869 Nocardioides ochotonae 0.00 1 1 S 2714938 Nocardioides piscis 0.00 1 0 G 2040 Aeromicrobium 0.00 1 1 S 1736691 Aeromicrobium choanae 0.00 1 0 G 116071 Micropruina 0.00 1 1 S 75385 Micropruina glycogenica 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 2975966 Kribbella sp. NBC_00359 0.19 198 2 O 85007 Mycobacteriales 0.17 176 0 F 1653 Corynebacteriaceae 0.17 176 68 G 1716 Corynebacterium 0.05 50 50 S 43765 Corynebacterium amycolatum 0.01 14 14 S 38289 Corynebacterium jeikeium 0.01 11 11 S 679663 Corynebacterium canis 0.01 6 6 S 187491 Corynebacterium glaucum 0.00 4 4 S 2080740 Corynebacterium yudongzhengii 0.00 3 3 S 161895 Corynebacterium phocae 0.00 3 3 S 38284 Corynebacterium accolens 0.00 2 2 S 169292 Corynebacterium aurimucosum 0.00 2 2 S 1758466 Corynebacterium faecale 0.00 2 2 S 35757 Corynebacterium cystitidis 0.00 2 2 S 61592 Corynebacterium durum 0.00 1 1 S 43768 Corynebacterium matruchotii 0.00 1 1 S 39791 Corynebacterium glucuronolyticum 0.00 1 1 S 38304 Corynebacterium tuberculostearicum 0.00 1 1 S 1414719 Corynebacterium jeddahense 0.00 1 1 S 53374 Corynebacterium coyleae 0.00 1 1 S 2709394 Corynebacterium lizhenjunii 0.00 1 0 S 234828 Corynebacterium caspium 0.00 1 1 S1 1121355 Corynebacterium caspium DSM 44850 0.00 1 1 S 598660 Corynebacterium pyruviciproducens 0.00 1 0 S 1718 Corynebacterium glutamicum 0.00 1 1 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.01 9 0 F 1762 Mycobacteriaceae 0.01 7 5 G 1866885 Mycolicibacterium 0.00 1 1 S 1772 Mycolicibacterium smegmatis 0.00 1 1 S 1801 Mycolicibacterium diernhoferi 0.00 2 0 G 1763 Mycobacterium 0.00 1 0 G1 120793 Mycobacterium avium complex (MAC) 0.00 1 1 S 2775496 Mycobacterium senriense 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.01 9 0 F 85025 Nocardiaceae 0.01 8 0 G 1817 Nocardia 0.01 8 8 S 37332 Nocardia seriolae 0.00 1 0 G 1827 Rhodococcus 0.00 1 1 S 1805840 Rhodococcus sovatensis 0.00 2 0 F 2805586 Lawsonellaceae 0.00 2 0 G 1847725 Lawsonella 0.00 2 2 S 1528099 Lawsonella clevelandensis 0.07 76 0 O 85011 Kitasatosporales 0.07 76 1 F 2062 Streptomycetaceae 0.07 74 6 G 1883 Streptomyces 0.05 55 3 G1 2593676 unclassified Streptomyces 0.02 16 16 S 2903645 Streptomyces sp. NBC_00310 0.01 14 14 S 2099583 Streptomyces sp. ICC1 0.01 10 10 S 3075198 Streptomyces sp. ITFR-16 0.00 2 2 S 2907545 Streptomyces sp. GQFP 0.00 2 2 S 2750025 Streptomyces sp. CB00271 0.00 2 2 S 2966192 Streptomyces sp. Je 1-369 0.00 1 1 S 2903817 Streptomyces sp. NBC_01298 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 1333528 Streptomyces sp. GMY02 0.00 1 1 S 2582831 Streptomyces sp. SUK 48 0.00 1 1 S 2695266 Streptomyces sp. HM190 0.00 4 0 G1 1477431 Streptomyces albidoflavus group 0.00 4 4 S 1886 Streptomyces albidoflavus 0.00 1 1 S 35621 Streptomyces mobaraensis 0.00 1 1 S 1648182 Streptomyces yangpuensis 0.00 1 1 S 1642299 Streptomyces alfalfae 0.00 1 1 S 1616117 Streptomyces formicae 0.00 1 0 G1 2867121 Streptomyces violaceoruber group 0.00 1 1 S 68174 Streptomyces anthocyanicus 0.00 1 1 S 42881 Streptomyces chromofuscus 0.00 1 1 S 1961 Streptomyces virginiae 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 58343 Streptomyces canus 0.00 1 0 S 54571 Streptomyces venezuelae 0.00 1 1 S1 953739 Streptomyces venezuelae ATCC 10712 0.00 1 0 G 2063 Kitasatospora 0.00 1 1 S 68217 Kitasatospora herbaricolor 0.01 7 0 O 85010 Pseudonocardiales 0.01 7 0 F 2070 Pseudonocardiaceae 0.00 4 0 G 1813 Amycolatopsis 0.00 3 0 G1 2618356 unclassified Amycolatopsis 0.00 3 3 S 2745196 Amycolatopsis sp. CA-230715 0.00 1 1 S 715475 Amycolatopsis mongoliensis 0.00 1 0 G 1847 Pseudonocardia 0.00 1 1 S 2074 Pseudonocardia autotrophica 0.00 1 0 G 1851 Saccharomonospora 0.00 1 0 S 40988 Saccharomonospora azurea 0.00 1 1 S1 882081 Saccharomonospora azurea NA-128 0.00 1 0 G 2071 Saccharothrix 0.00 1 0 G1 2593673 unclassified Saccharothrix 0.00 1 1 S 3231910 Saccharothrix sp. HUAS TT1 0.01 6 0 O 2037 Actinomycetales 0.01 6 0 F 2049 Actinomycetaceae 0.00 3 2 G 2529408 Schaalia 0.00 1 1 S 1660 Schaalia odontolytica 0.00 2 2 G 1654 Actinomyces 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.00 4 0 O 85004 Bifidobacteriales 0.00 4 0 F 31953 Bifidobacteriaceae 0.00 4 1 G 1678 Bifidobacterium 0.00 2 1 S 216816 Bifidobacterium longum 0.00 1 1 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 0 G1 2608897 unclassified Bifidobacterium 0.00 1 1 S 2983212 Bifidobacterium sp. ESL0682 0.00 4 0 O 85008 Micromonosporales 0.00 4 1 F 28056 Micromonosporaceae 0.00 2 1 G 1873 Micromonospora 0.00 1 1 G1 2617518 unclassified Micromonospora 0.00 1 0 G 35753 Dactylosporangium 0.00 1 1 S 35754 Dactylosporangium aurantiacum 0.00 2 0 O 85012 Streptosporangiales 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 83681 Nonomuraea 0.00 1 1 S 93944 Nonomuraea gerenzanensis 0.00 1 0 F 2012 Thermomonosporaceae 0.00 1 0 G 2019 Thermomonospora 0.00 1 1 S 1411117 Thermomonospora amylolytica 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 0 F 2162846 Candidatus Nanopelagicaceae 0.00 2 1 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.00 1 0 O 1217098 Jiangellales 0.00 1 0 F 1217100 Jiangellaceae 0.00 1 1 G 281472 Jiangella 0.05 47 0 C 84998 Coriobacteriia 0.04 39 0 O 1643822 Eggerthellales 0.04 39 1 F 1643826 Eggerthellaceae 0.04 36 0 G 1926677 Raoultibacter 0.04 36 36 S 1907662 Raoultibacter timonensis 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 1 G 447020 Adlercreutzia 0.01 8 0 O 84999 Coriobacteriales 0.00 4 0 F 84107 Coriobacteriaceae 0.00 4 0 G 102106 Collinsella 0.00 4 4 S 74426 Collinsella aerofaciens 0.00 4 1 F 1643824 Atopobiaceae 0.00 2 0 G 133925 Olsenella 0.00 2 0 S 133926 Olsenella uli 0.00 2 2 S1 633147 Olsenella uli DSM 7084 0.00 1 0 G 1380 Atopobium 0.00 1 0 G1 2643817 unclassified Atopobium 0.00 1 1 S 712157 Atopobium sp. oral taxon 416 0.00 5 0 C 84995 Rubrobacteria 0.00 5 0 O 84996 Rubrobacterales 0.00 5 0 F 84997 Rubrobacteraceae 0.00 5 5 G 42255 Rubrobacter 0.00 4 0 C 1497346 Thermoleophilia 0.00 2 2 O 588673 Solirubrobacterales 0.00 2 0 O 2843198 Miltoncostaeales 0.00 2 0 F 2843199 Miltoncostaeaceae 0.00 2 0 G 2843200 Miltoncostaea 0.00 2 2 S 2843215 Miltoncostaea marina 0.73 747 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.73 747 2 P 1117 Cyanobacteriota 0.73 745 75 C 3028117 Cyanophyceae 0.52 531 2 C1 1301283 Oscillatoriophycideae 0.46 468 13 O 1150 Oscillatoriales 0.37 376 0 F 2934961 Sirenicapillariaceae 0.37 376 0 G 2596745 Limnospira 0.37 376 0 S 147322 Limnospira indica 0.37 375 375 S1 2760438 Limnospira indica BM01 0.00 1 1 S1 376219 Limnospira indica PCC 8005 0.07 74 0 F 1892252 Microcoleaceae 0.06 61 59 G 54304 Planktothrix 0.00 2 0 S 1160 Planktothrix agardhii 0.00 2 2 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.01 13 0 G 1492710 Oxynema 0.01 13 0 S 2874213 Oxynema aestuarii 0.01 13 13 S1 2064643 Oxynema aestuarii AP17 0.00 4 0 F 1892254 Oscillatoriaceae 0.00 3 0 G 1198 Phormidium 0.00 3 0 S 2974039 Phormidium yuhuli 0.00 3 3 S1 2940671 Phormidium yuhuli AB48 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.00 1 0 O1 1892256 Oscillatoriales incertae sedis 0.00 1 0 G 2023214 Koinonema 0.00 1 0 G1 2781947 unclassified Koinonema 0.00 1 1 S 222819 [Phormidium] sp. ETS-05 0.06 61 0 O 1118 Chroococcales 0.05 47 0 F 1890449 Microcystaceae 0.05 47 0 G 1125 Microcystis 0.05 47 0 G1 2643300 unclassified Microcystis 0.05 47 47 S 1967666 Microcystis sp. MC19 0.01 10 0 F 1890450 Aphanothecaceae 0.01 10 0 G 1453359 Candidatus Atelocyanobacterium 0.01 10 1 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 9 9 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 4 4 F 1890464 Chroococcaceae 0.06 63 0 O 1955042 Gloeomargaritales 0.06 63 0 F 1955043 Gloeomargaritaceae 0.06 63 0 G 1188227 Gloeomargarita 0.06 63 0 S 1188228 Gloeomargarita lithophora 0.06 63 63 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.03 33 3 O 1161 Nostocales 0.01 14 1 F 1892259 Aphanizomenonaceae 0.01 12 0 G 752201 Sphaerospermopsis 0.01 12 0 S 984207 Sphaerospermopsis torques-reginae 0.01 12 12 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 1 0 G 110103 Anabaenopsis 0.00 1 0 S 156213 Anabaenopsis elenkinii 0.00 1 1 S1 2779889 Anabaenopsis elenkinii CCIBt3563 0.01 11 4 F 1162 Nostocaceae 0.00 5 0 G 1163 Anabaena 0.00 4 0 S 1165 Anabaena cylindrica 0.00 4 4 S1 272123 Anabaena cylindrica PCC 7122 0.00 1 0 G1 2619674 unclassified Anabaena 0.00 1 1 S 2490939 Anabaena sp. YBS01 0.00 2 2 G 1177 Nostoc 0.00 4 0 F 2661849 Calotrichaceae 0.00 4 0 G 1186 Calothrix 0.00 4 0 G1 2619626 unclassified Calothrix 0.00 3 3 S 1337936 Calothrix sp. 336/3 0.00 1 1 S 2005462 Calothrix sp. NIES-3974 0.00 1 0 F 1185 Rivulariaceae 0.00 1 0 G 373984 Rivularia 0.00 1 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 1 1 S 373994 Rivularia sp. PCC 7116 0.02 20 0 O 1890424 Synechococcales 0.01 15 0 F 1890426 Synechococcaceae 0.01 15 0 G 1129 Synechococcus 0.01 14 2 G1 2626047 unclassified Synechococcus 0.01 10 10 S 321327 Synechococcus sp. JA-3-3Ab 0.00 2 2 S 195250 Synechococcus sp. PCC 7336 0.00 1 1 S 32046 Synechococcus elongatus 0.00 3 0 F 2881426 Prochlorococcaceae 0.00 3 0 G 1218 Prochlorococcus 0.00 3 0 S 1219 Prochlorococcus marinus 0.00 3 3 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.00 2 0 F 1890428 Merismopediaceae 0.00 2 0 G 1142 Synechocystis 0.00 2 0 G1 2640012 unclassified Synechocystis 0.00 2 2 S 3144951 Synechocystis sp. LKSZ1 0.02 16 15 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 1 G 33071 Gloeobacter 0.00 3 0 O 2881377 Pseudanabaenales 0.00 3 0 F 1890436 Pseudanabaenaceae 0.00 3 1 G 1152 Pseudanabaena 0.00 2 0 G1 2593292 unclassified Pseudanabaena 0.00 2 2 S 82654 Pseudanabaena sp. PCC 7367 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 1890505 Chroococcidiopsidales 0.00 1 0 F 1890528 Chroococcidiopsidaceae 0.00 1 1 G 54298 Chroococcidiopsis 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 0 G1 2631661 unclassified Acaryochloris 0.00 1 1 S 2740837 Acaryochloris sp. 'Moss Beach' 0.26 263 65 P 544448 Mycoplasmatota 0.13 135 0 O 2790996 Mycoplasmoidales 0.12 127 0 F 2895623 Metamycoplasmataceae 0.10 105 5 G 2767358 Mycoplasmopsis 0.09 91 91 S 55603 Mycoplasmopsis caviae 0.00 3 3 S 33923 Mycoplasmopsis felis 0.00 2 2 S 114880 Mycoplasmopsis columbinasalis 0.00 2 2 S 171281 Mycoplasmopsis citelli 0.00 1 1 S 53558 Mycoplasmopsis edwardii 0.00 1 1 S 2113 Mycoplasmopsis californica 0.02 22 0 G 2895509 Metamycoplasma 0.02 22 22 S 45363 Metamycoplasma alkalescens 0.01 8 4 F 2790998 Mycoplasmoidaceae 0.00 2 0 G 2791001 Malacoplasma 0.00 2 2 S 2116 Malacoplasma iowae 0.00 2 1 G 2995234 Mycoplasmoides 0.00 1 1 S 2096 Mycoplasmoides gallisepticum 0.06 59 20 C 31969 Mollicutes 0.02 24 0 O 2085 Mycoplasmatales 0.02 24 0 F 2092 Mycoplasmataceae 0.02 24 3 G 2093 Mycoplasma 0.02 17 0 G1 2683645 unclassified Mycoplasma 0.01 9 9 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 5 5 S 2967302 Mycoplasma sp. 1018B 0.00 2 2 S 2801918 Mycoplasma sp. E35C 0.00 1 1 S 754514 Mycoplasma sp. Mirounga ES2805-ORL 0.00 4 0 G1 656088 Mycoplasma mycoides group 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 2 2 S 1179777 Mycoplasma feriruminatoris 0.01 13 0 O 186329 Acholeplasmatales 0.01 13 0 F 2146 Acholeplasmataceae 0.01 11 0 G 2147 Acholeplasma 0.01 11 11 S 2148 Acholeplasma laidlawii 0.00 1 0 G 33926 Candidatus Phytoplasma 0.00 1 0 G1 85628 16SrVIII (Loofah witches'-broom group) 0.00 1 1 S 35773 Candidatus Phytoplasma luffae 0.00 1 0 G 2903107 Paracholeplasma 0.00 1 1 S 61635 Paracholeplasma brassicae 0.00 2 0 O 186328 Entomoplasmatales 0.00 2 0 F 2131 Spiroplasmataceae 0.00 2 1 G 2132 Spiroplasma 0.00 1 0 S 301585 Spiroplasma platyhelix 0.00 1 1 S1 1276218 Spiroplasma platyhelix PALS-1 0.00 4 0 C 1912503 Candidatus Izimaplasma 0.00 4 0 O 2975519 Candidatus Izemoplasmatales 0.00 3 0 F 2975520 Candidatus Izemoplasmataceae 0.00 3 0 G 2975521 Candidatus Xianfuyuplasma 0.00 3 3 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.00 1 0 F 3078170 Hujiaoplasmataceae 0.00 1 0 G 3078171 Hujiaoplasma 0.00 1 1 S 2725268 Hujiaoplasma nucleasis 0.22 221 0 P 67819 Armatimonadota 0.21 220 0 C 1077257 Chthonomonadia 0.21 220 0 O 1077263 Chthonomonadales 0.21 220 0 F 1077264 Chthonomonadaceae 0.21 220 0 G 1077265 Chthonomonas 0.21 220 0 S 454171 Chthonomonas calidirosea 0.21 220 220 S1 1303518 Chthonomonas calidirosea T49 0.00 1 0 C 1663419 Fimbriimonadia 0.00 1 0 O 1663425 Fimbriimonadales 0.00 1 0 F 1663426 Fimbriimonadaceae 0.00 1 0 G 1005038 Fimbriimonas 0.00 1 0 S 1005039 Fimbriimonas ginsengisoli 0.00 1 1 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.13 134 0 P 200795 Chloroflexota 0.11 110 0 C 388447 Ktedonobacteria 0.11 110 0 O 388448 Ktedonobacterales 0.11 110 0 F 2692416 Ktedonosporobacteraceae 0.11 110 0 G 2692417 Ktedonosporobacter 0.11 110 110 S 2509675 Ktedonosporobacter rubrisoli 0.01 9 0 C 292625 Anaerolineae 0.01 9 0 O 292629 Anaerolineales 0.01 9 5 F 292628 Anaerolineaceae 0.00 3 0 G 233189 Anaerolinea 0.00 3 0 S 167964 Anaerolinea thermophila 0.00 3 3 S1 926569 Anaerolinea thermophila UNI-1 0.00 1 0 G 1649478 Pelolinea 0.00 1 1 S 913107 Pelolinea submarina 0.01 8 0 C 1382928 Ardenticatenia 0.01 8 0 O 3085098 Candidatus Promineifilales 0.01 8 0 F 3085097 Candidatus Promineifilaceae 0.01 8 0 G 1988031 Candidatus Promineifilum 0.01 8 8 S 1806508 Candidatus Promineifilum breve 0.00 4 0 C 2682225 Tepidiformia 0.00 4 0 O 2682226 Tepidiformales 0.00 4 0 F 2682227 Tepidiformaceae 0.00 4 4 G 2682228 Tepidiforma 0.00 2 0 C 32061 Chloroflexia 0.00 2 0 O 32064 Chloroflexales 0.00 1 0 O1 1508594 Chloroflexineae 0.00 1 0 F 1106 Chloroflexaceae 0.00 1 0 G 1107 Chloroflexus 0.00 1 0 S 152260 Chloroflexus aggregans 0.00 1 1 S1 326427 Chloroflexus aggregans DSM 9485 0.00 1 0 O1 1508595 Roseiflexineae 0.00 1 0 F 1508635 Roseiflexaceae 0.00 1 0 G 120961 Roseiflexus 0.00 1 0 G1 2609473 unclassified Roseiflexus 0.00 1 1 S 357808 Roseiflexus sp. RS-1 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 61434 Dehalococcoides 0.01 14 0 P 1297 Deinococcota 0.01 14 4 C 188787 Deinococci 0.01 10 0 O 118964 Deinococcales 0.01 10 0 F 183710 Deinococcaceae 0.01 10 0 G 1298 Deinococcus 0.01 7 0 S 68909 Deinococcus geothermalis 0.01 7 7 S1 319795 Deinococcus geothermalis DSM 11300 0.00 2 2 S 200252 Deinococcus aetherius 0.00 1 1 S 2202254 Deinococcus irradiatisoli 1.14 1168 9 P 200940 Thermodesulfobacteriota 1.10 1127 0 C 3031651 Desulfuromonadia 1.10 1127 4 O 69541 Desulfuromonadales 1.08 1109 0 F 213421 Desulfuromonadaceae 1.08 1109 1092 G 890 Desulfuromonas 0.02 17 17 S 1603606 Desulfuromonas soudanensis 0.01 13 0 F 3031659 Geopsychrobacteraceae 0.01 13 0 G 37817 Desulfuromusa 0.01 13 0 G1 97902 environmental samples 0.01 13 13 S 219183 uncultured Desulfuromusa sp. 0.00 1 0 F 3031665 Geoalkalibacteraceae 0.00 1 0 G 392332 Geoalkalibacter 0.00 1 1 S 483547 Geoalkalibacter subterraneus 0.03 26 0 C 67799 Thermodesulfobacteria 0.03 26 23 O 188710 Thermodesulfobacteriales 0.00 2 0 F 3031464 Thermodesulfatatoraceae 0.00 2 0 G 241192 Thermodesulfatator 0.00 2 0 S 171695 Thermodesulfatator indicus 0.00 2 2 S1 667014 Thermodesulfatator indicus DSM 15286 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 1 G 1740 Thermodesulfobacterium 0.00 3 0 C 3031646 Desulfarculia 0.00 3 0 O 453227 Desulfarculales 0.00 3 0 F 453228 Desulfarculaceae 0.00 2 0 G 453229 Desulfarculus 0.00 2 0 S 453230 Desulfarculus baarsii 0.00 2 2 S1 644282 Desulfarculus baarsii DSM 2075 0.00 1 0 G 3093638 Desulfoferula 0.00 1 1 S 3058419 Desulfoferula mesophila 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213465 Syntrophobacteraceae 0.00 1 0 G 361106 Desulfoglaeba 0.00 1 0 S 361111 Desulfoglaeba alkanexedens 0.00 1 1 S1 980445 Desulfoglaeba alkanexedens ALDC 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 1 G 2289 Desulfobacter 0.00 1 0 C 3031449 Desulfovibrionia 0.00 1 0 O 213115 Desulfovibrionales 0.00 1 0 F 194924 Desulfovibrionaceae 0.00 1 0 G 2802295 Nitratidesulfovibrio 0.00 1 1 S 2604158 Nitratidesulfovibrio liaohensis 0.23 236 0 D1 1783270 FCB group 0.23 234 0 D2 68336 Bacteroidota/Chlorobiota group 0.22 225 2 P 976 Bacteroidota 0.10 105 0 C 117743 Flavobacteriia 0.10 105 2 O 200644 Flavobacteriales 0.07 69 0 O1 313602 Flavobacteriales incertae sedis 0.07 69 0 G 336809 Candidatus Karelsulcia 0.07 69 69 S 336810 Candidatus Karelsulcia muelleri 0.03 26 3 F 49546 Flavobacteriaceae 0.02 18 5 G 237 Flavobacterium 0.01 6 0 G1 196869 unclassified Flavobacterium 0.00 3 3 S 2977321 Flavobacterium sp. TR2 0.00 2 2 S 2871165 Flavobacterium sp. CHNK8 0.00 1 1 S 935222 Flavobacterium sp. Sr18 0.00 4 4 S 996 Flavobacterium columnare 0.00 3 3 S 2704140 Flavobacterium bizetiae 0.00 2 0 G 1016 Capnocytophaga 0.00 1 1 S 1017 Capnocytophaga gingivalis 0.00 1 1 S 28188 Capnocytophaga canimorsus 0.00 2 0 G 83612 Psychroflexus 0.00 2 0 G1 196864 unclassified Psychroflexus 0.00 2 2 S 2777186 Psychroflexus sp. ALD_RP9 0.00 1 0 G 286104 Winogradskyella 0.00 1 1 S 2686077 Winogradskyella forsetii 0.00 5 0 F 2762318 Weeksellaceae 0.00 5 0 F1 2782232 Chryseobacterium group 0.00 4 1 G 59732 Chryseobacterium 0.00 3 3 S 1813611 Chryseobacterium cucumeris 0.00 1 0 G 2782231 Kaistella 0.00 1 1 S 2820270 Candidatus Kaistella beijingensis 0.00 2 0 F 1755828 Ichthyobacteriaceae 0.00 2 0 G 1755829 Ichthyobacterium 0.00 2 2 S 242600 Ichthyobacterium seriolicida 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 1 G 34098 Blattabacterium 0.07 74 1 C 200643 Bacteroidia 0.07 72 0 O 171549 Bacteroidales 0.05 47 1 F 171552 Prevotellaceae 0.03 28 10 G 2974251 Segatella 0.02 17 15 S 165179 Segatella copri 0.00 2 2 S1 537011 Segatella copri DSM 18205 0.00 1 1 S 2518605 Segatella hominis 0.01 12 3 G 838 Prevotella 0.00 4 0 G1 2638335 unclassified Prevotella 0.00 4 0 S 652716 Prevotella sp. oral taxon 299 0.00 4 4 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 3 3 S 28129 Prevotella denticola 0.00 1 1 S 28132 Prevotella melaninogenica 0.00 1 1 S 2801997 Prevotella herbatica 0.00 3 0 G 2974257 Hoylesella 0.00 3 3 S 28127 Hoylesella buccalis 0.00 2 0 G 2884814 Pseudoprevotella 0.00 2 2 S 2133944 Pseudoprevotella muciniphila 0.00 1 1 G 577309 Paraprevotella 0.02 19 0 F 815 Bacteroidaceae 0.02 19 0 G 816 Bacteroides 0.02 17 17 S 817 Bacteroides fragilis 0.00 2 2 S 818 Bacteroides thetaiotaomicron 0.00 2 0 F 171550 Rikenellaceae 0.00 2 0 G 1647173 Acetobacteroides 0.00 2 0 G1 1760810 environmental samples 0.00 2 2 S 1760811 uncultured Acetobacteroides sp. 0.00 1 0 F 171551 Porphyromonadaceae 0.00 1 0 G 836 Porphyromonas 0.00 1 0 G1 2645799 unclassified Porphyromonas 0.00 1 1 S 712435 Porphyromonas sp. oral taxon 275 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 294702 Proteiniphilum 0.00 1 1 S 2829812 Proteiniphilum propionicum 0.00 1 0 F 2005525 Tannerellaceae 0.00 1 0 G 375288 Parabacteroides 0.00 1 1 S 823 Parabacteroides distasonis 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 0 F 558415 Marinilabiliaceae 0.00 1 0 G 1628153 Carboxylicivirga 0.00 1 0 G1 1628155 environmental samples 0.00 1 1 S 1628156 uncultured Carboxylicivirga sp. 0.04 38 0 C 768503 Cytophagia 0.04 38 0 O 768507 Cytophagales 0.02 24 0 F 89373 Cytophagaceae 0.02 24 0 G 107 Spirosoma 0.02 23 23 S 2666025 Spirosoma endbachense 0.00 1 1 S 2735870 Spirosoma taeanense 0.01 8 0 F 1853232 Hymenobacteraceae 0.00 5 0 G 89966 Hymenobacter 0.00 3 0 G1 2615202 unclassified Hymenobacter 0.00 3 3 S 2675878 Hymenobacter sp. BRD128 0.00 1 1 S 2615203 Hymenobacter baengnokdamensis 0.00 1 1 S 2607656 Hymenobacter busanensis 0.00 3 2 G 323449 Pontibacter 0.00 1 0 G1 2648980 unclassified Pontibacter 0.00 1 1 S 3074898 Pontibacter sp. G13 0.00 5 0 F 1501348 Amoebophilaceae 0.00 5 0 G 273135 Candidatus Cardinium 0.00 5 5 S 247481 Candidatus Cardinium hertigii 0.00 1 0 F 2762286 Fulvivirgaceae 0.00 1 0 G 1433993 Chryseolinea 0.00 1 1 S 2321403 Chryseolinea soli 0.00 3 0 C 117747 Sphingobacteriia 0.00 3 0 O 200666 Sphingobacteriales 0.00 3 0 F 84566 Sphingobacteriaceae 0.00 3 1 G 423349 Mucilaginibacter 0.00 2 0 G1 2617802 unclassified Mucilaginibacter 0.00 2 2 S 2703789 Mucilaginibacter sp. 14171R-50 0.00 3 0 C 1853228 Chitinophagia 0.00 3 0 O 1853229 Chitinophagales 0.00 3 0 F 563835 Chitinophagaceae 0.00 1 0 G 2812019 Pseudocnuella 0.00 1 1 S 2502779 Pseudocnuella soli 0.00 1 0 G 649461 Lacibacter 0.00 1 1 S 2760713 Lacibacter sediminis 0.00 1 0 G 1004301 Flavihumibacter 0.00 1 1 S 2838157 Flavihumibacter fluvii 0.01 8 0 P 1090 Chlorobiota 0.01 8 0 C 191410 Chlorobiia 0.01 8 0 O 191411 Chlorobiales 0.01 8 0 F 2968741 Chloroherpetonaceae 0.01 8 0 G 100715 Chloroherpeton 0.01 8 0 S 100716 Chloroherpeton thalassium 0.01 8 8 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 0 O 1853224 Rhodothermales 0.00 1 0 F 563843 Rhodothermaceae 0.00 1 0 G 29548 Rhodothermus 0.00 1 1 S 29549 Rhodothermus marinus 0.00 1 0 P 142182 Gemmatimonadota 0.00 1 0 C 219685 Gemmatimonadia 0.00 1 0 O 219686 Gemmatimonadales 0.00 1 0 F 219687 Gemmatimonadaceae 0.00 1 1 G 173479 Gemmatimonas 0.00 1 0 P 456828 Candidatus Cloacimonadota 0.00 1 0 C 3039863 Candidatus Cloacimonadia 0.00 1 0 O 3039864 Candidatus Cloacimonadales 0.00 1 0 F 3039865 Candidatus Cloacimonadaceae 0.00 1 0 G 456826 Candidatus Cloacimonas 0.00 1 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.00 1 1 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.13 134 0 D1 1783257 PVC group 0.05 50 0 P 74201 Verrucomicrobiota 0.03 31 0 P1 326457 Verrucomicrobiota incertae sedis 0.03 31 0 G 1541670 Methylacidimicrobium 0.03 31 30 G1 2730358 unclassified Methylacidimicrobium 0.00 1 1 S 2730359 Methylacidimicrobium sp. AP8 0.01 9 0 C 203494 Verrucomicrobiia 0.01 9 0 O 48461 Verrucomicrobiales 0.01 9 0 F 203557 Verrucomicrobiaceae 0.01 7 0 G 2735 Verrucomicrobium 0.01 7 0 G1 2625155 unclassified Verrucomicrobium 0.01 7 7 S 1882831 Verrucomicrobium sp. GAS474 0.00 2 0 G 518753 Luteolibacter 0.00 2 2 S 2824561 Luteolibacter ambystomatis 0.01 6 1 C 414999 Opitutia 0.00 4 0 O 415001 Puniceicoccales 0.00 4 0 O1 3056381 Puniceicoccales incertae sedis 0.00 4 0 G 3049269 Candidatus Pelagisphaera 0.00 4 4 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 O 415000 Opitutales 0.00 1 1 F 134623 Opitutaceae 0.00 4 0 C 1955630 Methylacidiphilae 0.00 4 0 O 717963 Methylacidiphilales 0.00 4 0 F 717964 Methylacidiphilaceae 0.00 4 4 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.05 48 0 P 203682 Planctomycetota 0.04 38 19 C 203683 Planctomycetia 0.01 11 0 O 2691356 Isosphaerales 0.01 11 5 F 1763524 Isosphaeraceae 0.00 2 0 G 1763521 Paludisphaera 0.00 2 2 S 1387353 Paludisphaera borealis 0.00 2 0 G 2680020 Tautonia 0.00 2 2 S 2527974 Tautonia plasticadhaerens 0.00 1 0 G 127 Isosphaera 0.00 1 0 S 128 Isosphaera pallida 0.00 1 1 S1 575540 Isosphaera pallida ATCC 43644 0.00 1 0 G 466152 Singulisphaera 0.00 1 0 S 466153 Singulisphaera acidiphila 0.00 1 1 S1 886293 Singulisphaera acidiphila DSM 18658 0.00 4 0 O 2691354 Pirellulales 0.00 2 1 F 2691359 Lacipirellulaceae 0.00 1 0 G 2691417 Lacipirellula 0.00 1 1 S 2528024 Lacipirellula limnantheis 0.00 1 0 F 2691357 Pirellulaceae 0.00 1 0 G 1579506 Roseimaritima 0.00 1 1 S 980254 Roseimaritima ulvae 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.00 3 0 O 112 Planctomycetales 0.00 3 1 F 126 Planctomycetaceae 0.00 1 0 G 2795778 Caulifigura 0.00 1 1 S 2527983 Caulifigura coniformis 0.00 1 0 G 2795780 Symmachiella 0.00 1 1 S 2527995 Symmachiella dynata 0.00 1 0 O 2691355 Gemmatales 0.00 1 1 F 1914233 Gemmataceae 0.01 7 0 C 2897345 Candidatus Uabimicrobiia 0.01 7 0 O 2897347 Candidatus Uabimicrobiales 0.01 7 0 F 2897348 Candidatus Uabimicrobiaceae 0.01 7 0 G 2897349 Candidatus Uabimicrobium 0.01 7 7 S 2596890 Candidatus Uabimicrobium amorphum 0.00 3 0 C 666505 Phycisphaerae 0.00 3 0 O 2483366 Sedimentisphaerales 0.00 3 0 F 2690158 Anaerohalosphaeraceae 0.00 3 0 G 2690159 Anaerohalosphaera 0.00 3 3 S 1936003 Anaerohalosphaera lusitana 0.03 33 0 P 204428 Chlamydiota 0.03 33 31 C 204429 Chlamydiia 0.00 2 0 O 1963360 Parachlamydiales 0.00 2 0 F 92713 Parachlamydiaceae 0.00 2 0 G 282132 Candidatus Protochlamydia 0.00 2 2 S 389348 Candidatus Protochlamydia naegleriophila 0.00 2 0 P 134625 Kiritimatiellota 0.00 1 0 C 1921781 Kiritimatiellia 0.00 1 0 O 1921782 Kiritimatiellales 0.00 1 0 F 1921783 Kiritimatiellaceae 0.00 1 0 G 1921784 Kiritimatiella 0.00 1 1 S 1307763 Kiritimatiella glycovorans 0.00 1 0 C 2907184 Tichowtungiia 0.00 1 0 O 2907185 Tichowtungiales 0.00 1 0 F 2907186 Tichowtungiaceae 0.00 1 0 G 2907187 Tichowtungia 0.00 1 1 S 2697043 Tichowtungia aerotolerans 0.00 1 0 P 67812 Candidatus Omnitrophota 0.00 1 0 G 2789201 Candidatus Velamenicoccus 0.00 1 1 S 1930593 Candidatus Velamenicoccus archaeovorus 0.09 88 0 P 29547 Campylobacterota 0.09 88 0 C 3031852 Epsilonproteobacteria 0.08 87 0 O 213849 Campylobacterales 0.07 72 0 F 2932623 Sulfurospirillaceae 0.07 72 0 G 57665 Sulfurospirillum 0.07 72 0 S 66821 Sulfurospirillum multivorans 0.07 72 72 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.01 11 0 F 72294 Campylobacteraceae 0.01 11 10 G 194 Campylobacter 0.00 1 1 S 200 Campylobacter curvus 0.00 4 1 F 2808963 Arcobacteraceae 0.00 3 0 G 2321111 Aliarcobacter 0.00 3 3 S 28198 Aliarcobacter cryaerophilus 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 224467 Nautiliaceae 0.00 1 1 G 191291 Nautilia 0.03 30 0 D1 2323 Bacteria incertae sedis 0.03 30 0 D2 1783234 Bacteria candidate phyla 0.02 24 0 D3 95901 Candidatus Dependentiae 0.02 24 0 C 2497643 Candidatus Babeliae 0.02 24 0 O 2497644 Candidatus Babeliales 0.02 24 0 F 2953756 Candidatus Chromulinivoraceae 0.02 24 0 G 2953757 Candidatus Chromulinivorax 0.02 24 24 S 2066483 Candidatus Chromulinivorax destructor 0.00 5 4 P 95818 Candidatus Saccharibacteria 0.00 1 0 C 2093818 Candidatus Saccharimonadia 0.00 1 0 O 2093819 Candidatus Nanosynbacterales 0.00 1 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 1 1 G 2093823 Candidatus Nanosynbacter 0.00 1 0 P 221235 Candidatus Absconditabacteria 0.00 1 0 O 2900568 Candidatus Absconditabacterales 0.00 1 0 F 2900569 Candidatus Absconditicoccaceae 0.00 1 0 G 2900570 Candidatus Absconditicoccus 0.00 1 1 S 2735562 Candidatus Absconditicoccus praedator 0.02 19 0 P 32066 Fusobacteriota 0.02 19 0 C 203490 Fusobacteriia 0.02 19 0 O 203491 Fusobacteriales 0.01 10 0 F 203492 Fusobacteriaceae 0.01 10 8 G 848 Fusobacterium 0.00 1 0 S 76857 Fusobacterium polymorphum 0.00 1 1 S1 393480 Fusobacterium polymorphum ATCC 10953 0.00 1 1 S 76859 Fusobacterium animalis 0.01 9 0 F 1129771 Leptotrichiaceae 0.01 8 0 G 32067 Leptotrichia 0.00 3 3 S 157691 Leptotrichia shahii 0.00 2 2 S 157687 Leptotrichia wadei 0.00 2 0 G1 2633022 unclassified Leptotrichia 0.00 1 1 S 712357 Leptotrichia sp. oral taxon 212 0.00 1 1 S 1785996 Leptotrichia sp. oral taxon 847 0.00 1 1 S 554406 Leptotrichia hongkongensis 0.00 1 0 G 32068 Sebaldella 0.00 1 0 S 826 Sebaldella termitidis 0.00 1 1 S1 526218 Sebaldella termitidis ATCC 33386 0.01 11 0 P 203691 Spirochaetota 0.01 11 0 C 203692 Spirochaetia 0.01 9 1 O 136 Spirochaetales 0.00 4 0 F 2845253 Treponemataceae 0.00 4 0 G 157 Treponema 0.00 3 0 S 88058 Treponema primitia 0.00 3 3 S1 545694 Treponema primitia ZAS-2 0.00 1 0 S 167 Treponema succinifaciens 0.00 1 1 S1 869209 Treponema succinifaciens DSM 2489 0.00 2 2 F 1643685 Borreliaceae 0.00 1 0 F 137 Spirochaetaceae 0.00 1 0 G 146 Spirochaeta 0.00 1 1 S 154 Spirochaeta thermophila 0.00 1 0 F 2791015 Sphaerochaetaceae 0.00 1 0 G 3062336 Parasphaerochaeta 0.00 1 0 S 273376 Parasphaerochaeta coccoides 0.00 1 1 S1 760011 Parasphaerochaeta coccoides DSM 17374 0.00 2 0 O 1643688 Leptospirales 0.00 2 0 F 170 Leptospiraceae 0.00 2 0 G 171 Leptospira 0.00 2 0 S 172 Leptospira biflexa 0.00 2 2 S1 145259 Leptospira biflexa serovar Patoc 0.01 8 0 P 2818505 Myxococcota 0.01 7 0 P1 3031711 Polyangia 0.01 7 0 O 3031712 Polyangiales 0.01 7 0 F 49 Polyangiaceae 0.01 7 0 G 39643 Sorangium 0.01 7 6 S 56 Sorangium cellulosum 0.00 1 1 S1 448385 Sorangium cellulosum So ce56 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 32 Myxococcus 0.00 1 1 S 2813577 Myxococcus landrumus 0.01 6 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 6 0 P 1293497 Nitrospinota 0.01 6 0 C 1293498 Nitrospinia 0.01 6 0 O 1293499 Nitrospinales 0.01 6 0 F 407032 Nitrospinaceae 0.01 6 0 G 35800 Nitrospina 0.01 6 6 S 1323948 Nitrospina watsonii 0.01 6 0 P 57723 Acidobacteriota 0.00 5 0 C 533205 Holophagae 0.00 5 0 O 533206 Acanthopleuribacterales 0.00 5 0 F 533207 Acanthopleuribacteraceae 0.00 5 0 G 2915177 Sulfidibacter 0.00 5 5 S 2818388 Sulfidibacter corallicola 0.00 1 0 C 1562566 Blastocatellia 0.00 1 0 G 458032 Chloracidobacterium 0.00 1 1 S 2821543 Chloracidobacterium validum 0.00 4 0 P 200918 Thermotogota 0.00 4 0 C 188708 Thermotogae 0.00 2 2 O 2419 Thermotogales 0.00 1 0 O 1643947 Petrotogales 0.00 1 0 F 1643949 Petrotogaceae 0.00 1 0 G 2778400 Tepiditoga 0.00 1 1 S 2108365 Tepiditoga spiralis 0.00 1 0 O 1769716 Mesoaciditogales 0.00 1 0 F 1769717 Mesoaciditogaceae 0.00 1 0 G 1769718 Athalassotoga 0.00 1 1 S 1441386 Athalassotoga saccharophila 0.00 4 0 P 200930 Deferribacterota 0.00 4 0 C 68337 Deferribacteres 0.00 4 2 O 191393 Deferribacterales 0.00 1 1 F 2945019 Geovibrionaceae 0.00 1 0 F 2945022 Flexistipitaceae 0.00 1 0 G 2351 Flexistipes 0.00 1 0 S 2352 Flexistipes sinusarabici 0.00 1 1 S1 717231 Flexistipes sinusarabici DSM 4947 0.00 4 0 P 3018035 Bdellovibrionota 0.00 4 0 C 3031419 Bacteriovoracia 0.00 4 0 O 2024979 Bacteriovoracales 0.00 2 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 1 0 G 263370 Peredibacter 0.00 1 1 S 28202 Peredibacter starrii 0.00 2 0 F 1652132 Halobacteriovoraceae 0.00 2 0 G 1652133 Halobacteriovorax 0.00 2 0 G1 2639665 unclassified Halobacteriovorax 0.00 2 2 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 3 0 P 40117 Nitrospirota 0.00 2 0 C 2811502 Thermodesulfovibrionia 0.00 2 0 O 2811503 Thermodesulfovibrionales 0.00 2 0 F 2811505 Dissulfurispiraceae 0.00 2 0 G 2811506 Dissulfurispira 0.00 2 2 S 2715679 Dissulfurispira thermophila 0.00 1 0 C 203693 Nitrospiria 0.00 1 0 O 189778 Nitrospirales 0.00 1 0 F 189779 Nitrospiraceae 0.00 1 0 G 1234 Nitrospira 0.00 1 1 S 2973512 Nitrospira tepida 0.00 1 0 P 200783 Aquificota 0.00 1 0 C 187857 Aquificia 0.00 1 0 O 32069 Aquificales 0.00 1 0 F 224027 Hydrogenothermaceae 0.00 1 1 G 212790 Sulfurihydrogenibium 0.00 1 0 D1 2498710 Caldisericota/Cryosericota group 0.00 1 0 P 67814 Caldisericota 0.00 1 0 C 693071 Caldisericia 0.00 1 0 O 693072 Caldisericales 0.00 1 0 F 693073 Caldisericaceae 0.00 1 0 G 693074 Caldisericum 0.00 1 0 S 693075 Caldisericum exile 0.00 1 1 S1 511051 Caldisericum exile AZM16c01 0.01 7 0 D 2157 Archaea 0.01 7 0 P 28890 Euryarchaeota 0.00 4 0 P1 2290931 Stenosarchaea group 0.00 3 0 C 183963 Halobacteria 0.00 3 1 O 2235 Halobacteriales 0.00 1 0 F 1644061 Natrialbaceae 0.00 1 0 G 2765402 Natrarchaeobaculum 0.00 1 0 G1 2765406 unclassified Natrarchaeobaculum 0.00 1 1 S 3053904 Natrialbaceae archaeon AArc-T1-2 0.00 1 0 F 3064797 Haladaptataceae 0.00 1 0 G 1070314 Halorussus 0.00 1 1 S 2953748 Halorussus aquaticus 0.00 1 0 C 224756 Methanomicrobia 0.00 1 0 O 2191 Methanomicrobiales 0.00 1 0 F 1198451 Methanoregulaceae 0.00 1 0 G 475087 Methanosphaerula 0.00 1 0 S 475088 Methanosphaerula palustris 0.00 1 1 S1 521011 Methanosphaerula palustris E1-9c 0.00 3 0 C 2545688 Candidatus Methanoliparia 0.00 3 0 O 2545689 Candidatus Methanoliparales 0.00 3 0 F 2545690 Candidatus Methanoliparaceae 0.00 3 0 G 2545692 Candidatus Methanoliparum 0.00 3 0 G1 2874847 unclassified Candidatus Methanoliparum 0.00 3 3 S 2874846 Candidatus Methanoliparum sp. LAM-1 0.06 58 0 D 10239 Viruses 0.04 43 0 D1 2731341 Duplodnaviria 0.04 43 0 K 2731360 Heunggongvirae 0.04 43 0 P 2731618 Uroviricota 0.04 43 0 C 2731619 Caudoviricetes 0.04 41 0 F 2946170 Straboviridae 0.04 41 0 F1 1198136 Tevenvirinae 0.04 41 0 G 10663 Tequatrovirus 0.04 41 0 S 2844199 Tequatrovirus gee4507 0.04 41 41 S1 2502306 Escherichia phage vB_EcoM_G4507 0.00 2 0 G 3044751 Ludhianavirus 0.00 2 0 S 3060172 Ludhianavirus D6 0.00 2 2 S1 2593322 Aeromonas phage D6 0.01 14 0 C 2840056 Naldaviricetes 0.01 14 0 O 2840070 Lefavirales 0.01 14 0 F 10442 Baculoviridae 0.01 14 0 G 558017 Betabaculovirus 0.01 14 0 S 3051997 Betabaculovirus chofumiferanae 0.01 14 14 S1 56947 Choristoneura fumiferana granulovirus 0.00 1 0 D1 2732004 Varidnaviria 0.00 1 0 K 2732005 Bamfordvirae 0.00 1 0 P 2732007 Nucleocytoviricota 0.00 1 0 C 2732523 Megaviricetes 0.00 1 0 O 2732554 Imitervirales 0.00 1 0 F 549779 Mimiviridae 0.00 1 0 F1 3044648 Megamimivirinae 0.00 1 0 G 3044761 Megavirus 0.00 1 0 S 3060302 Megavirus powaiense 0.00 1 1 S1 1842663 Powai lake megavirus