15.11 629 629 U 0 unclassified 84.89 3535 1 R 1 root 84.85 3533 0 R1 131567 cellular organisms 84.85 3533 433 D 2 Bacteria 47.86 1993 25 P 1224 Pseudomonadota 31.87 1327 122 C 1236 Gammaproteobacteria 17.80 741 0 O 135614 Lysobacterales 17.80 741 1 F 32033 Lysobacteraceae 17.72 738 0 G 338 Xanthomonas 17.72 738 738 S 29447 Xanthomonas albilineans 0.05 2 1 G 40323 Stenotrophomonas 0.02 1 0 G1 995085 Stenotrophomonas maltophilia group 0.02 1 1 S 40324 Stenotrophomonas maltophilia 7.06 294 11 O 91347 Enterobacterales 5.36 223 26 F 543 Enterobacteriaceae 1.99 83 1 G 561 Escherichia 1.97 82 68 S 562 Escherichia coli 0.22 9 9 S1 1322345 Escherichia coli ATCC 25922 0.07 3 3 S1 2874053 Escherichia coli O25:H1 0.02 1 1 S1 1446600 Escherichia coli O15:H18 0.02 1 1 S1 2079157 Escherichia coli O2:H1 0.91 38 0 F1 2890311 Klebsiella/Raoultella group 0.91 38 3 G 570 Klebsiella 0.67 28 25 S 573 Klebsiella pneumoniae 0.07 3 3 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.14 6 6 S 548 Klebsiella aerogenes 0.02 1 1 S 1463165 Klebsiella quasipneumoniae 0.91 38 1 G 590 Salmonella 0.89 37 2 S 28901 Salmonella enterica 0.84 35 1 S1 59201 Salmonella enterica subsp. enterica 0.22 9 9 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.12 5 5 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.12 5 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.05 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.05 2 2 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.10 4 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.05 2 2 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.05 2 2 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.05 2 2 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.05 2 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.05 2 2 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.05 2 2 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.05 2 2 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.02 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.02 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.02 1 1 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.02 1 1 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.46 19 0 G 547 Enterobacter 0.43 18 0 G1 354276 Enterobacter cloacae complex 0.29 12 12 S 299767 Enterobacter ludwigii 0.10 4 4 S 158836 Enterobacter hormaechei 0.05 2 2 S 208224 Enterobacter kobei 0.02 1 0 G1 2608935 unclassified Enterobacter 0.02 1 1 S 2724468 Enterobacter sp. JUb54 0.12 5 0 G 544 Citrobacter 0.10 4 0 G1 1344959 Citrobacter freundii complex 0.10 4 4 S 67828 Citrobacter gillenii 0.02 1 0 S 35703 Citrobacter amalonaticus 0.02 1 1 S1 1261127 Citrobacter amalonaticus Y19 0.10 4 0 F1 191675 Enterobacteriaceae incertae sedis 0.10 4 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.07 3 0 F3 84564 ant endosymbionts 0.07 3 0 G 203804 Candidatus Blochmanniella 0.05 2 2 S 251538 Candidatus Blochmannia ocreatus 0.02 1 0 G1 711328 unclassified Candidatus Blochmanniella 0.02 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.02 1 0 F3 146507 aphid secondary symbionts 0.02 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.10 4 1 F1 36866 unclassified Enterobacteriaceae 0.05 2 2 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.02 1 1 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.07 3 0 G 620 Shigella 0.07 3 3 S 623 Shigella flexneri 0.05 2 0 G 401618 Candidatus Riesia 0.05 2 2 S 401619 Candidatus Riesia pediculicola 0.02 1 1 G 1330547 Kosakonia 0.46 19 0 F 2812006 Bruguierivoracaceae 0.46 19 0 G 84565 Sodalis 0.41 17 17 S 2697027 Sodalis ligni 0.05 2 2 S 1239307 Sodalis praecaptivus 0.41 17 0 F 1903414 Morganellaceae 0.26 11 0 G 581 Morganella 0.26 11 11 S 582 Morganella morganii 0.12 5 0 G 637 Arsenophonus 0.07 3 3 S 638 Arsenophonus nasoniae 0.05 2 2 S 634113 Candidatus Arsenophonus lipoptenae 0.02 1 0 G 583 Proteus 0.02 1 1 S 584 Proteus mirabilis 0.26 11 0 F 1903409 Erwiniaceae 0.14 6 0 G 551 Erwinia 0.14 6 6 S 1922217 Candidatus Erwinia haradaeae 0.07 3 2 G 53335 Pantoea 0.02 1 1 S 553 Pantoea ananatis 0.05 2 0 G 32199 Buchnera 0.05 2 2 S 9 Buchnera aphidicola 0.26 11 0 F 1903411 Yersiniaceae 0.22 9 0 G 613 Serratia 0.17 7 7 S 138074 Serratia symbiotica 0.02 1 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.02 1 1 S 2785630 Serratia sp. CMO1 0.02 1 0 S 82996 Serratia plymuthica 0.02 1 1 S1 1006598 Serratia plymuthica RVH1 0.02 1 0 G 629 Yersinia 0.02 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.02 1 0 S 632 Yersinia pestis 0.02 1 1 S1 649716 Yersinia pestis Pestoides G 0.02 1 1 G 1927833 Candidatus Fukatsuia 0.02 1 0 F 1903410 Pectobacteriaceae 0.02 1 0 G 122277 Pectobacterium 0.02 1 1 S 180957 Pectobacterium brasiliense 0.02 1 0 F 1903412 Hafniaceae 0.02 1 1 G 635 Edwardsiella 0.98 41 1 O 135622 Alteromonadales 0.86 36 0 F 267888 Pseudoalteromonadaceae 0.48 20 0 G 2834759 Flocculibacter 0.48 20 20 S 2744479 Flocculibacter collagenilyticus 0.38 16 0 G 53246 Pseudoalteromonas 0.38 16 0 G1 194690 unclassified Pseudoalteromonas 0.38 16 16 S 649161 Pseudoalteromonas sp. 3J6 0.05 2 0 F 267890 Shewanellaceae 0.05 2 0 G 22 Shewanella 0.02 1 1 S 62322 Shewanella baltica 0.02 1 0 G1 196818 unclassified Shewanella 0.02 1 1 S 2590015 Shewanella sp. SNU WT4 0.02 1 1 F 72275 Alteromonadaceae 0.02 1 0 F 267891 Moritellaceae 0.02 1 0 G 58050 Moritella 0.02 1 0 S 90736 Moritella marina 0.02 1 1 S1 1202962 Moritella marina ATCC 15381 0.74 31 0 O 72274 Pseudomonadales 0.74 31 0 F 135621 Pseudomonadaceae 0.67 28 10 G 286 Pseudomonas 0.17 7 0 G1 136841 Pseudomonas aeruginosa group 0.17 7 7 S 287 Pseudomonas aeruginosa 0.14 6 0 G1 136843 Pseudomonas fluorescens group 0.10 4 0 S 47883 Pseudomonas synxantha 0.10 4 4 S1 96901 Pseudomonas synxantha BG33R 0.02 1 1 S 47878 Pseudomonas azotoformans 0.02 1 1 S 294 Pseudomonas fluorescens 0.05 2 0 G1 136845 Pseudomonas putida group 0.02 1 1 S 303 Pseudomonas putida 0.02 1 1 S 78327 Pseudomonas mosselii 0.02 1 1 G1 196821 unclassified Pseudomonas 0.02 1 1 S 2738125 Pseudomonas hefeiensis 0.02 1 0 G1 136849 Pseudomonas syringae group 0.02 1 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.02 1 0 S 317 Pseudomonas syringae 0.02 1 1 S1 1357279 Pseudomonas syringae CC1557 0.05 2 0 G 1654787 Thiopseudomonas 0.05 2 2 S 1697053 Thiopseudomonas alkaliphila 0.02 1 0 F1 351 Azotobacter group 0.02 1 1 G 352 Azotobacter 0.67 28 0 O 135623 Vibrionales 0.67 28 5 F 641 Vibrionaceae 0.46 19 11 G 662 Vibrio 0.07 3 3 S 2572923 Vibrio taketomensis 0.07 3 0 G1 717610 Vibrio harveyi group 0.02 1 1 S 669 Vibrio harveyi 0.02 1 1 S 670 Vibrio parahaemolyticus 0.02 1 0 G2 2315253 Vibrio diabolicus subgroup 0.02 1 1 S 50719 Vibrio diabolicus 0.02 1 1 S 666 Vibrio cholerae 0.02 1 0 G1 2614977 unclassified Vibrio 0.02 1 1 S 2661921 Vibrio sp. THAF191c 0.10 4 1 G 657 Photobacterium 0.07 3 3 S 553611 Photobacterium leiognathi 0.41 17 1 O 135619 Oceanospirillales 0.24 10 3 F 28256 Halomonadaceae 0.12 5 0 G 2745 Halomonas 0.12 5 5 S 3031727 Halomonas piscis 0.05 2 0 F1 114403 Zymobacter group 0.02 1 0 G 114185 Candidatus Carsonella 0.02 1 0 S 114186 Candidatus Carsonella ruddii 0.02 1 1 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.02 1 0 G 235572 Candidatus Portiera 0.02 1 1 S 91844 Candidatus Portiera aleyrodidarum 0.10 4 0 F 135620 Oceanospirillaceae 0.05 2 0 G 267849 Nitrincola 0.05 2 2 S 2614693 Nitrincola iocasae 0.02 1 0 G 28253 Marinomonas 0.02 1 1 S 2773454 Marinomonas algicola 0.02 1 0 G 48075 Marinobacterium 0.02 1 0 G1 2644139 unclassified Marinobacterium 0.02 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.05 2 0 F 255527 Saccharospirillaceae 0.02 1 0 G 230494 Reinekea 0.02 1 1 S 1336806 Reinekea forsetii 0.02 1 0 G 231683 Saccharospirillum 0.02 1 1 S 2161747 Saccharospirillum mangrovi 0.34 14 0 O 2887326 Moraxellales 0.34 14 0 F 468 Moraxellaceae 0.31 13 2 G 469 Acinetobacter 0.22 9 1 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.12 5 5 S 470 Acinetobacter baumannii 0.07 3 0 S 48296 Acinetobacter pittii 0.07 3 3 S1 871585 Acinetobacter pittii PHEA-2 0.02 1 1 S 202956 Acinetobacter towneri 0.02 1 0 G1 196816 unclassified Acinetobacter 0.02 1 1 S 2563897 Acinetobacter sp. 10FS3-1 0.02 1 0 G 475 Moraxella 0.02 1 1 S 2904120 Moraxella nasibovis 0.24 10 0 O 135618 Methylococcales 0.24 10 1 F 403 Methylococcaceae 0.19 8 0 G 39773 Methylomicrobium 0.19 8 0 S 39775 Methylomicrobium album 0.19 8 8 S1 686340 Methylomicrobium album BG8 0.02 1 1 G 416 Methylomonas 0.19 8 0 O 72273 Thiotrichales 0.12 5 0 F 2056687 Fastidiosibacteraceae 0.12 5 0 G 2056696 Cysteiniphilum 0.12 5 0 G1 2610889 unclassified Cysteiniphilum 0.12 5 5 S 2975055 Cysteiniphilum sp. QT6929 0.07 3 0 F 135616 Piscirickettsiaceae 0.05 2 2 G 34067 Cycloclasticus 0.02 1 0 G 1237 Piscirickettsia 0.02 1 1 S 1238 Piscirickettsia salmonis 0.17 7 0 O 135613 Chromatiales 0.14 6 0 F 1046 Chromatiaceae 0.05 2 2 G 1056 Thiocapsa 0.02 1 1 G 1227 Nitrosococcus 0.02 1 0 G 85073 Thermochromatium 0.02 1 0 S 1050 Thermochromatium tepidum 0.02 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.02 1 0 G 2796146 Candidatus Nitrosacidococcus 0.02 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.02 1 0 G 2828366 Caldichromatium 0.02 1 1 S 2699430 Caldichromatium japonicum 0.02 1 0 F 255526 Halothiobacillaceae 0.02 1 1 G 109262 Halothiobacillus 0.10 4 0 O 135625 Pasteurellales 0.10 4 0 F 712 Pasteurellaceae 0.05 2 0 G 214906 Histophilus 0.05 2 2 S 731 Histophilus somni 0.02 1 0 G 724 Haemophilus 0.02 1 1 S 726 Haemophilus haemolyticus 0.02 1 0 G 2094023 Glaesserella 0.02 1 0 G1 2629322 unclassified Glaesserella 0.02 1 1 S 2030797 Glaesserella sp. 15-184 0.05 2 0 O 118969 Legionellales 0.02 1 0 F 444 Legionellaceae 0.02 1 0 G 445 Legionella 0.02 1 1 S 28084 Legionella cherrii 0.02 1 0 F 118968 Coxiellaceae 0.02 1 0 G 254245 Aquicella 0.02 1 1 S 254247 Aquicella siphonis 0.05 2 0 C1 118884 Gammaproteobacteria incertae sedis 0.05 2 0 G 204619 Candidatus Nardonella 0.05 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.05 2 0 O 135615 Cardiobacteriales 0.05 2 0 F 868 Cardiobacteriaceae 0.05 2 0 G 13275 Suttonella 0.05 2 0 G1 2908647 unclassified Suttonella 0.05 2 2 S 2908648 Suttonella sp. R2A3 0.02 1 0 O 1775403 Nevskiales 0.02 1 1 F 568386 Nevskiaceae 0.02 1 0 O 2975284 Candidatus Comchoanobacterales 0.02 1 0 F 2975285 Candidatus Comchoanobacteraceae 0.02 1 0 G 2975286 Candidatus Comchoanobacter 0.02 1 1 S 2919598 Candidatus Comchoanobacter bicostacola 0.02 1 0 O 1706369 Cellvibrionales 0.02 1 0 F 1706372 Halieaceae 0.02 1 0 G 2847769 Aequoribacter 0.02 1 1 S 2518989 Aequoribacter fuscus 0.02 1 0 O 135624 Aeromonadales 0.02 1 0 F 84642 Aeromonadaceae 0.02 1 0 G 225143 Oceanisphaera 0.02 1 1 S 1903694 Oceanisphaera avium 14.53 605 14 C 28211 Alphaproteobacteria 11.72 488 2 O 204441 Rhodospirillales 11.58 482 0 F 2844601 Stellaceae 11.58 482 0 G 93 Stella 11.58 482 482 S 94 Stella humosa 0.07 3 0 F 433 Acetobacteraceae 0.07 3 0 G 512381 Acidisoma 0.07 3 0 G1 2634065 unclassified Acidisoma 0.07 3 3 S 3040935 Acidisoma sp. PAMC 29798 0.02 1 0 F 41295 Rhodospirillaceae 0.02 1 0 G 111830 Defluviicoccus 0.02 1 1 S 111831 Defluviicoccus vanus 1.73 72 0 O 204458 Caulobacterales 1.73 72 1 F 76892 Caulobacteraceae 1.71 71 0 G 41275 Brevundimonas 1.71 71 0 G1 2622653 unclassified Brevundimonas 1.71 71 71 S 2560058 Brevundimonas sp. Bb-A 0.41 17 2 O 356 Hyphomicrobiales 0.19 8 2 F 119045 Methylobacteriaceae 0.12 5 4 G 407 Methylobacterium 0.02 1 0 S 31998 Methylobacterium radiotolerans 0.02 1 1 S1 426355 Methylobacterium radiotolerans JCM 2831 0.02 1 1 G 186650 Microvirga 0.07 3 1 F 82115 Rhizobiaceae 0.05 2 1 F1 227290 Rhizobium/Agrobacterium group 0.02 1 0 G 357 Agrobacterium 0.02 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.02 1 1 S 358 Agrobacterium tumefaciens 0.05 2 0 F 41294 Nitrobacteraceae 0.05 2 0 G 374 Bradyrhizobium 0.02 1 1 S 1355477 Bradyrhizobium diazoefficiens 0.02 1 0 G1 2631580 unclassified Bradyrhizobium 0.02 1 1 S 3140244 Bradyrhizobium sp. B097 0.02 1 0 F 2831106 Devosiaceae 0.02 1 0 G 3064792 Mariluticola 0.02 1 1 S 2909283 Mariluticola halotolerans 0.02 1 0 F 255475 Aurantimonadaceae 0.02 1 1 G 414371 Aureimonas 0.10 4 3 O 204455 Rhodobacterales 0.02 1 0 F 31989 Paracoccaceae 0.02 1 1 G 265 Paracoccus 0.10 4 0 O 204457 Sphingomonadales 0.07 3 0 F 41297 Sphingomonadaceae 0.07 3 2 G 13687 Sphingomonas 0.02 1 1 S 1813879 Sphingomonas panacisoli 0.02 1 0 F 335929 Erythrobacteraceae 0.02 1 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.02 1 0 G 1111 Porphyrobacter 0.02 1 0 G1 2683265 unclassified Porphyrobacter 0.02 1 1 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.07 3 0 O 766 Rickettsiales 0.07 3 1 F 775 Rickettsiaceae 0.05 2 0 F1 33988 Rickettsieae 0.05 2 0 G 780 Rickettsia 0.05 2 0 G1 114277 spotted fever group 0.05 2 0 S 781 Rickettsia conorii 0.05 2 2 S1 369822 Rickettsia conorii subsp. raoultii 0.02 1 0 O 54526 Candidatus Pelagibacterales 0.02 1 0 F 1655514 Candidatus Pelagibacteraceae 0.02 1 1 G 198251 Candidatus Pelagibacter 0.02 1 0 O 2800060 Hyphomonadales 0.02 1 0 F 69657 Hyphomonadaceae 0.02 1 1 G 85 Hyphomonas 0.02 1 0 O 2800059 Maricaulales 0.02 1 0 F 2800061 Maricaulaceae 0.02 1 0 G 74317 Maricaulis 0.02 1 1 S 74318 Maricaulis maris 0.84 35 4 C 28216 Betaproteobacteria 0.62 26 1 O 80840 Burkholderiales 0.34 14 1 F 119060 Burkholderiaceae 0.22 9 0 G 48736 Ralstonia 0.22 9 0 G1 3116862 Ralstonia solanacearum species complex 0.22 9 9 S 305 Ralstonia solanacearum 0.05 2 0 G 32008 Burkholderia 0.05 2 0 G1 87882 Burkholderia cepacia complex 0.05 2 2 S 152500 Burkholderia dolosa 0.02 1 0 G 47670 Lautropia 0.02 1 1 S 47671 Lautropia mirabilis 0.02 1 0 G 1822464 Paraburkholderia 0.02 1 1 S 2571748 Paraburkholderia acidisoli 0.17 7 0 F 80864 Comamonadaceae 0.10 4 0 G 283 Comamonas 0.10 4 4 S 2743470 Comamonas antarctica 0.05 2 0 G 219181 Ottowia 0.05 2 0 G1 2645081 unclassified Ottowia 0.05 2 2 S 1658672 Ottowia sp. oral taxon 894 0.02 1 0 G 174951 Ramlibacter 0.02 1 1 S 94132 Ramlibacter tataouinensis 0.07 3 2 F 75682 Oxalobacteraceae 0.02 1 0 G 884214 Candidatus Zinderia 0.02 1 0 G1 3077950 unclassified Candidatus Zinderia 0.02 1 1 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.02 1 0 F 2975441 Sphaerotilaceae 0.02 1 0 G 34102 Sphaerotilus 0.02 1 1 S 639200 Sphaerotilus sulfidivorans 0.10 4 1 O 206351 Neisseriales 0.05 2 1 F 481 Neisseriaceae 0.02 1 0 G 482 Neisseria 0.02 1 1 S 487 Neisseria meningitidis 0.02 1 1 F 2897177 Chitinibacteraceae 0.02 1 1 O 32003 Nitrosomonadales 0.02 1 0 C 1807140 Acidithiobacillia 0.02 1 0 O 225057 Acidithiobacillales 0.02 1 0 F 225058 Acidithiobacillaceae 0.02 1 1 G 119977 Acidithiobacillus 22.36 931 82 D1 1783272 Terrabacteria group 12.30 512 25 P 1239 Bacillota 9.77 407 6 C 91061 Bacilli 6.12 255 3 O 186826 Lactobacillales 2.62 109 0 F 81852 Enterococcaceae 2.62 109 0 G 1350 Enterococcus 2.40 100 100 S 1351 Enterococcus faecalis 0.12 5 5 S 1352 Enterococcus faecium 0.10 4 2 S 1354 Enterococcus hirae 0.05 2 2 S1 768486 Enterococcus hirae ATCC 9790 1.87 78 8 F 33958 Lactobacillaceae 0.94 39 26 G 46255 Weissella 0.12 5 5 S 1249 Weissella paramesenteroides 0.12 5 5 S 1583 Weissella confusa 0.02 1 1 S 137591 Weissella cibaria 0.02 1 1 S 155866 Weissella soli 0.02 1 1 S 1162633 Weissella diestrammenae 0.14 6 0 G 2767887 Ligilactobacillus 0.12 5 5 S 89059 Ligilactobacillus acidipiscis 0.02 1 1 S 1624 Ligilactobacillus salivarius 0.10 4 0 G 2767842 Lactiplantibacillus 0.10 4 4 S 1590 Lactiplantibacillus plantarum 0.07 3 0 G 2767886 Levilactobacillus 0.05 2 2 S 1580 Levilactobacillus brevis 0.02 1 1 S 267363 Levilactobacillus zymae 0.05 2 1 G 1253 Pediococcus 0.02 1 0 G1 1670797 Pediococcus acidilactici group 0.02 1 1 S 1254 Pediococcus acidilactici 0.05 2 0 G 2767881 Fructilactobacillus 0.02 1 1 S 1625 Fructilactobacillus sanfranciscensis 0.02 1 1 S 53444 Fructilactobacillus lindneri 0.05 2 0 G 2759736 Lacticaseibacillus 0.05 2 2 S 1597 Lacticaseibacillus paracasei 0.05 2 0 G 2742598 Limosilactobacillus 0.02 1 1 S 1598 Limosilactobacillus reuteri 0.02 1 1 S 1613 Limosilactobacillus fermentum 0.05 2 0 G 1578 Lactobacillus 0.05 2 2 S 33959 Lactobacillus johnsonii 0.05 2 2 G 1243 Leuconostoc 0.02 1 0 G 2930384 Periweissella 0.02 1 1 S 2506420 Periweissella cryptocerci 0.02 1 1 G 2767893 Lentilactobacillus 0.02 1 0 G 2767878 Bombilactobacillus 0.02 1 1 S 1303590 Bombilactobacillus bombi 0.02 1 1 G 46254 Oenococcus 0.02 1 0 G 2767885 Latilactobacillus 0.02 1 1 S 1599 Latilactobacillus sakei 0.02 1 1 G 2767889 Loigolactobacillus 1.49 62 0 F 1300 Streptococcaceae 1.46 61 14 G 1301 Streptococcus 0.82 34 33 S 1308 Streptococcus thermophilus 0.02 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.07 3 3 S 1314 Streptococcus pyogenes 0.05 2 2 S 1310 Streptococcus sobrinus 0.05 2 1 S 1313 Streptococcus pneumoniae 0.02 1 1 S1 869311 Streptococcus pneumoniae SPN032672 0.02 1 1 S 1304 Streptococcus salivarius 0.02 1 1 S 1348 Streptococcus parauberis 0.02 1 1 S 1346 Streptococcus iniae 0.02 1 1 S 1311 Streptococcus agalactiae 0.02 1 1 G1 2608887 unclassified Streptococcus 0.02 1 1 S 1345 Streptococcus ferus 0.02 1 1 G 1357 Lactococcus 0.05 2 1 F 186827 Aerococcaceae 0.02 1 1 G 1375 Aerococcus 0.02 1 0 F 186828 Carnobacteriaceae 0.02 1 1 G 1470540 Jeotgalibaca 3.51 146 6 O 1385 Bacillales 1.75 73 2 F 186817 Bacillaceae 0.62 26 0 G 84406 Virgibacillus 0.60 25 25 S 447199 Virgibacillus salarius 0.02 1 0 G1 2620237 unclassified Virgibacillus 0.02 1 1 S 2419841 Virgibacillus sp. Bac330 0.58 24 1 G 1386 Bacillus 0.26 11 0 G1 653685 Bacillus subtilis group 0.19 8 0 G2 1938374 Bacillus amyloliquefaciens group 0.17 7 7 S 492670 Bacillus velezensis 0.02 1 1 S 1390 Bacillus amyloliquefaciens 0.07 3 1 S 1423 Bacillus subtilis 0.02 1 1 S1 86029 Bacillus subtilis subsp. natto 0.02 1 1 S1 135461 Bacillus subtilis subsp. subtilis 0.24 10 0 G1 86661 Bacillus cereus group 0.07 3 3 S 64104 Bacillus pseudomycoides 0.05 2 2 S 1396 Bacillus cereus 0.05 2 2 S 1392 Bacillus anthracis 0.02 1 1 S 2026186 Bacillus paranthracis 0.02 1 1 S 2026191 Bacillus luti 0.02 1 0 S 1428 Bacillus thuringiensis 0.02 1 1 S1 1217737 Bacillus thuringiensis HD-789 0.05 2 0 G1 1792192 Bacillus altitudinis complex 0.05 2 2 S 293387 Bacillus altitudinis 0.29 12 0 G 2893057 Shouchella 0.29 12 12 S 79880 Shouchella clausii 0.02 1 0 G 1329200 Fictibacillus 0.02 1 1 S 1017270 Fictibacillus enclensis 0.02 1 0 G 45667 Halobacillus 0.02 1 1 S 45668 Halobacillus litoralis 0.02 1 1 G 2837504 Heyndrickxia 0.02 1 0 G 3033930 Fervidibacillus 0.02 1 1 S 2980027 Fervidibacillus halotolerans 0.02 1 1 G 2675229 Peribacillus 0.02 1 0 G 175304 Lentibacillus 0.02 1 1 S 1472767 Lentibacillus amyloliquefaciens 0.02 1 1 G 182709 Oceanobacillus 0.02 1 0 G 400634 Lysinibacillus 0.02 1 1 S 28031 Lysinibacillus fusiformis 0.02 1 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.02 1 0 S 86665 Halalkalibacterium halodurans 0.02 1 1 S1 272558 Halalkalibacterium halodurans C-125 1.08 45 1 F 90964 Staphylococcaceae 1.03 43 6 G 1279 Staphylococcus 0.53 22 22 S 1280 Staphylococcus aureus 0.12 5 5 S 1282 Staphylococcus epidermidis 0.10 4 4 S 1286 Staphylococcus simulans 0.07 3 3 S 28035 Staphylococcus lugdunensis 0.05 2 2 S 70255 Staphylococcus condimenti 0.02 1 1 S 29382 Staphylococcus cohnii 0.02 1 0 G 2803850 Mammaliicoccus 0.02 1 1 S 1296 Mammaliicoccus sciuri 0.22 9 0 F 186820 Listeriaceae 0.17 7 0 G 1637 Listeria 0.10 4 0 G1 2642072 unclassified Listeria 0.10 4 4 S 1844999 Listeria sp. PSOL-1 0.05 2 0 S 1638 Listeria ivanovii 0.05 2 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.05 2 2 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.02 1 1 S 1641 Listeria grayi 0.05 2 0 G 2755 Brochothrix 0.05 2 2 S 2756 Brochothrix thermosphacta 0.17 7 0 F 186822 Paenibacillaceae 0.17 7 2 G 44249 Paenibacillus 0.07 3 0 G1 185978 unclassified Paenibacillus 0.02 1 1 S 715179 Paenibacillus sp. sptzw28 0.02 1 1 S 2741301 Paenibacillus sp. URB8-2 0.02 1 1 S 2921460 Paenibacillus sp. FSL K6-1096 0.02 1 1 S 130049 Paenibacillus dendritiformis 0.02 1 1 S 2509456 Paenibacillus protaetiae 0.10 4 2 F 186818 Planococcaceae 0.02 1 0 G 1372 Planococcus 0.02 1 1 S 1038856 Planococcus plakortidis 0.02 1 0 G 1569 Sporosarcina 0.02 1 0 G1 2647733 unclassified Sporosarcina 0.02 1 1 S 2810514 Sporosarcina sp. Marseille-Q4063 0.05 2 0 F 186821 Sporolactobacillaceae 0.05 2 1 G 2077 Sporolactobacillus 0.02 1 1 S 269673 Sporolactobacillus terrae 1.59 66 1 C 186801 Clostridia 0.82 34 9 O 186802 Eubacteriales 0.24 10 0 F 31979 Clostridiaceae 0.24 10 4 G 1485 Clostridium 0.12 5 0 S 1493 Clostridium cellulovorans 0.12 5 5 S1 573061 Clostridium cellulovorans 743B 0.02 1 1 S 1561 Clostridium baratii 0.19 8 7 F 31984 Heliobacteriaceae 0.02 1 0 G 79598 Heliorestis 0.02 1 1 S 356322 Heliorestis convoluta 0.14 6 1 F 216572 Oscillospiraceae 0.12 5 0 G 1263 Ruminococcus 0.10 4 4 S 2564099 Ruminococcus bovis 0.02 1 1 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.02 1 0 O1 538999 Eubacteriales incertae sedis 0.02 1 0 G 1918454 Flintibacter 0.02 1 0 G1 2610894 unclassified Flintibacter 0.02 1 1 S 2610895 Flintibacter sp. KGMB00164 0.60 25 0 O 53433 Halanaerobiales 0.60 25 0 F 53434 Halobacteroidaceae 0.60 25 0 G 42417 Halobacteroides 0.60 25 0 S 42422 Halobacteroides halobius 0.60 25 25 S1 748449 Halobacteroides halobius DSM 5150 0.07 3 0 O 3085636 Lachnospirales 0.07 3 1 F 186803 Lachnospiraceae 0.02 1 1 G 207244 Anaerostipes 0.02 1 0 G 2944195 Qiania 0.02 1 1 S 2763669 Qiania dongpingensis 0.05 2 0 O 3082720 Peptostreptococcales 0.02 1 1 F 186804 Peptostreptococcaceae 0.02 1 0 F 3030910 Anaerovoracaceae 0.02 1 1 G 86331 Mogibacterium 0.02 1 0 O 68295 Thermoanaerobacterales 0.02 1 0 F 186814 Thermoanaerobacteraceae 0.02 1 0 G 3051499 Aceticella 0.02 1 1 S 2755338 Aceticella autotrophica 0.14 6 0 C 526524 Erysipelotrichia 0.14 6 2 O 526525 Erysipelotrichales 0.10 4 0 F 128827 Erysipelotrichaceae 0.05 2 0 G 1729679 Faecalibaculum 0.05 2 2 S 1702221 Faecalibaculum rodentium 0.02 1 0 G 123375 Solobacterium 0.02 1 1 S 102148 Solobacterium moorei 0.02 1 0 G 174708 Allobaculum 0.02 1 1 S 2834459 Allobaculum mucilyticum 0.10 4 0 C 909932 Negativicutes 0.10 4 0 O 1843489 Veillonellales 0.10 4 0 F 31977 Veillonellaceae 0.07 3 1 G 29465 Veillonella 0.02 1 1 S 29466 Veillonella parvula 0.02 1 1 S 423477 Veillonella rogosae 0.02 1 1 G 39948 Dialister 0.10 4 0 C 1737404 Tissierellia 0.07 3 1 O 1737405 Tissierellales 0.05 2 0 F 1570339 Peptoniphilaceae 0.05 2 0 G 1161127 Murdochiella 0.05 2 2 S 1852373 Murdochiella vaginalis 0.02 1 0 C1 1737407 Tissierellia incertae sedis 0.02 1 0 G 1582879 Ezakiella 0.02 1 1 S 46507 Ezakiella coagulans 4.06 169 2 P 201174 Actinomycetota 3.53 147 6 C 1760 Actinomycetes 1.85 77 0 O 85011 Kitasatosporales 1.85 77 0 F 2062 Streptomycetaceae 1.85 77 1 G 1883 Streptomyces 1.80 75 0 G1 2593676 unclassified Streptomyces 1.68 70 70 S 2099583 Streptomyces sp. ICC1 0.10 4 4 S 2903645 Streptomyces sp. NBC_00310 0.02 1 1 S 2933779 Streptomyces sp. WAC00303 0.02 1 1 S 1690221 Streptomyces spongiicola 0.65 27 1 O 85009 Propionibacteriales 0.58 24 3 F 31957 Propionibacteriaceae 0.46 19 3 G 1912216 Cutibacterium 0.38 16 16 S 1747 Cutibacterium acnes 0.02 1 0 G 29404 Microlunatus 0.02 1 0 G1 2619695 unclassified Microlunatus 0.02 1 1 S 2672569 Microlunatus sp. Gsoil 973 0.02 1 0 G 72763 Tessaracoccus 0.02 1 1 S 1285901 Tessaracoccus defluvii 0.05 2 0 F 85015 Nocardioidaceae 0.05 2 0 G 1839 Nocardioides 0.05 2 0 G1 2615069 unclassified Nocardioides 0.02 1 1 S 2976000 Nocardioides sp. NBC_00368 0.02 1 1 S 2917724 Nocardioides sp. TF02-7 0.48 20 1 O 85006 Micrococcales 0.24 10 0 F 2805591 Tropherymataceae 0.24 10 0 G 2038 Tropheryma 0.24 10 10 S 2039 Tropheryma whipplei 0.19 8 2 F 85023 Microbacteriaceae 0.05 2 2 G 33886 Rathayibacter 0.05 2 2 G 55968 Leucobacter 0.02 1 0 G 2034 Curtobacterium 0.02 1 0 G1 257496 unclassified Curtobacterium 0.02 1 1 S 2862880 Curtobacterium sp. TC1 0.02 1 0 F1 1655488 Luna cluster 0.02 1 1 F2 1655489 Luna-1 subcluster 0.02 1 0 F 85017 Promicromonosporaceae 0.02 1 0 G 186188 Xylanimonas 0.02 1 0 S 186189 Xylanimonas cellulosilytica 0.02 1 1 S1 446471 Xylanimonas cellulosilytica DSM 15894 0.24 10 0 O 85007 Mycobacteriales 0.19 8 0 F 1653 Corynebacteriaceae 0.19 8 3 G 1716 Corynebacterium 0.10 4 4 S 679663 Corynebacterium canis 0.02 1 1 S 53374 Corynebacterium coyleae 0.02 1 0 F 85025 Nocardiaceae 0.02 1 1 G 1827 Rhodococcus 0.02 1 0 F 2805586 Lawsonellaceae 0.02 1 0 G 1847725 Lawsonella 0.02 1 1 S 1528099 Lawsonella clevelandensis 0.07 3 0 O 2037 Actinomycetales 0.07 3 0 F 2049 Actinomycetaceae 0.05 2 0 G 2692113 Gleimia 0.05 2 2 S 595468 Gleimia hominis 0.02 1 1 G 2529408 Schaalia 0.02 1 0 O 85004 Bifidobacteriales 0.02 1 0 F 31953 Bifidobacteriaceae 0.02 1 1 G 1678 Bifidobacterium 0.02 1 0 O 85008 Micromonosporales 0.02 1 0 F 28056 Micromonosporaceae 0.02 1 1 G 1873 Micromonospora 0.02 1 0 O 85012 Streptosporangiales 0.02 1 0 F 2004 Streptosporangiaceae 0.02 1 0 G 2005 Microbispora 0.02 1 0 G1 2614687 unclassified Microbispora 0.02 1 1 S 3144104 Microbispora sp. ZYX-F-249 0.02 1 0 O 622450 Actinopolysporales 0.02 1 0 F 622451 Actinopolysporaceae 0.02 1 0 G 1849 Actinopolyspora 0.02 1 1 S 414996 Actinopolyspora erythraea 0.38 16 0 C 84998 Coriobacteriia 0.38 16 0 O 1643822 Eggerthellales 0.38 16 0 F 1643826 Eggerthellaceae 0.31 13 0 G 1926677 Raoultibacter 0.31 13 13 S 1907662 Raoultibacter timonensis 0.07 3 3 G 447020 Adlercreutzia 0.05 2 0 C 84992 Acidimicrobiia 0.05 2 0 O 84993 Acidimicrobiales 0.05 2 1 F 633392 Iamiaceae 0.02 1 0 G 467975 Iamia 0.02 1 1 S 467976 Iamia majanohamensis 0.02 1 0 C 84995 Rubrobacteria 0.02 1 0 O 84996 Rubrobacterales 0.02 1 0 F 84997 Rubrobacteraceae 0.02 1 1 G 42255 Rubrobacter 0.02 1 0 C 1497346 Thermoleophilia 0.02 1 0 O 588673 Solirubrobacterales 0.02 1 0 F 320583 Conexibacteraceae 0.02 1 0 G 191494 Conexibacter 0.02 1 0 G1 2627773 unclassified Conexibacter 0.02 1 1 S 2937801 Conexibacter sp. DBS9H8 2.11 88 0 D2 1798711 Cyanobacteriota/Melainabacteria group 2.11 88 0 P 1117 Cyanobacteriota 2.11 88 18 C 3028117 Cyanophyceae 1.42 59 0 C1 1301283 Oscillatoriophycideae 1.06 44 0 O 1150 Oscillatoriales 0.96 40 0 F 2934961 Sirenicapillariaceae 0.96 40 0 G 2596745 Limnospira 0.96 40 0 S 147322 Limnospira indica 0.96 40 40 S1 2760438 Limnospira indica BM01 0.07 3 0 F 1892254 Oscillatoriaceae 0.07 3 0 G 1198 Phormidium 0.07 3 0 S 2974039 Phormidium yuhuli 0.07 3 3 S1 2940671 Phormidium yuhuli AB48 0.02 1 0 F 1892252 Microcoleaceae 0.02 1 1 G 54304 Planktothrix 0.36 15 0 O 1118 Chroococcales 0.24 10 0 F 1890449 Microcystaceae 0.24 10 0 G 1125 Microcystis 0.24 10 0 G1 2643300 unclassified Microcystis 0.24 10 10 S 1967666 Microcystis sp. MC19 0.10 4 0 F 1890450 Aphanothecaceae 0.10 4 0 G 1453359 Candidatus Atelocyanobacterium 0.10 4 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.10 4 4 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.02 1 1 F 1890464 Chroococcaceae 0.14 6 0 O 1161 Nostocales 0.10 4 0 F 1892259 Aphanizomenonaceae 0.07 3 0 G 748770 Dolichospermum 0.07 3 0 S 136073 Dolichospermum compactum 0.07 3 3 S1 1973481 Dolichospermum compactum NIES-806 0.02 1 0 G 752201 Sphaerospermopsis 0.02 1 0 S 984207 Sphaerospermopsis torques-reginae 0.02 1 1 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.05 2 1 F 1162 Nostocaceae 0.02 1 0 G 1163 Anabaena 0.02 1 0 S 1165 Anabaena cylindrica 0.02 1 1 S1 272123 Anabaena cylindrica PCC 7122 0.07 3 0 O 1890424 Synechococcales 0.07 3 0 F 1890426 Synechococcaceae 0.07 3 0 G 1129 Synechococcus 0.07 3 1 G1 2626047 unclassified Synechococcus 0.02 1 1 S 195250 Synechococcus sp. PCC 7336 0.02 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.02 1 1 O 307595 Gloeobacterales 0.02 1 0 O 1955042 Gloeomargaritales 0.02 1 0 F 1955043 Gloeomargaritaceae 0.02 1 0 G 1188227 Gloeomargarita 0.02 1 0 S 1188228 Gloeomargarita lithophora 0.02 1 1 S1 1188229 Gloeomargarita lithophora Alchichica-D10 1.54 64 38 P 544448 Mycoplasmatota 0.38 16 2 C 31969 Mollicutes 0.26 11 0 O 2085 Mycoplasmatales 0.24 10 0 F 2092 Mycoplasmataceae 0.24 10 0 G 2093 Mycoplasma 0.14 6 0 G1 2683645 unclassified Mycoplasma 0.12 5 5 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.02 1 1 S 2801918 Mycoplasma sp. E35C 0.10 4 0 G1 656088 Mycoplasma mycoides group 0.10 4 4 S 1179777 Mycoplasma feriruminatoris 0.02 1 0 O1 1665628 unclassified Mycoplasmatales 0.02 1 1 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.05 2 0 O 186329 Acholeplasmatales 0.05 2 0 F 2146 Acholeplasmataceae 0.05 2 0 G 2147 Acholeplasma 0.05 2 2 S 2148 Acholeplasma laidlawii 0.02 1 0 O 186328 Entomoplasmatales 0.02 1 0 F 2131 Spiroplasmataceae 0.02 1 1 G 2132 Spiroplasma 0.24 10 0 O 2790996 Mycoplasmoidales 0.12 5 0 F 2790998 Mycoplasmoidaceae 0.07 3 0 G 2791001 Malacoplasma 0.05 2 0 S 28227 Malacoplasma penetrans 0.05 2 2 S1 272633 Malacoplasma penetrans HF-2 0.02 1 1 S 2116 Malacoplasma iowae 0.05 2 2 G 2995234 Mycoplasmoides 0.12 5 0 F 2895623 Metamycoplasmataceae 0.12 5 0 G 2767358 Mycoplasmopsis 0.05 2 2 S 33923 Mycoplasmopsis felis 0.05 2 2 S 55603 Mycoplasmopsis caviae 0.02 1 1 S 28903 Mycoplasmopsis bovis 0.29 12 1 P 200795 Chloroflexota 0.22 9 0 C 388447 Ktedonobacteria 0.22 9 0 O 388448 Ktedonobacterales 0.22 9 0 F 2692416 Ktedonosporobacteraceae 0.22 9 0 G 2692417 Ktedonosporobacter 0.22 9 9 S 2509675 Ktedonosporobacter rubrisoli 0.02 1 0 C 1382928 Ardenticatenia 0.02 1 0 O 3085098 Candidatus Promineifilales 0.02 1 0 F 3085097 Candidatus Promineifilaceae 0.02 1 0 G 1988031 Candidatus Promineifilum 0.02 1 1 S 1806508 Candidatus Promineifilum breve 0.02 1 0 C 2682225 Tepidiformia 0.02 1 0 O 2682226 Tepidiformales 0.02 1 0 F 2682227 Tepidiformaceae 0.02 1 1 G 2682228 Tepidiforma 0.10 4 0 P 67819 Armatimonadota 0.10 4 0 C 1077257 Chthonomonadia 0.10 4 0 O 1077263 Chthonomonadales 0.10 4 0 F 1077264 Chthonomonadaceae 0.10 4 0 G 1077265 Chthonomonas 0.10 4 0 S 454171 Chthonomonas calidirosea 0.10 4 4 S1 1303518 Chthonomonas calidirosea T49 1.73 72 0 P 200940 Thermodesulfobacteriota 1.63 68 0 C 3031651 Desulfuromonadia 1.63 68 0 O 69541 Desulfuromonadales 1.54 64 0 F 213421 Desulfuromonadaceae 1.54 64 64 G 890 Desulfuromonas 0.10 4 0 F 3031659 Geopsychrobacteraceae 0.10 4 0 G 37817 Desulfuromusa 0.10 4 0 G1 97902 environmental samples 0.10 4 4 S 219183 uncultured Desulfuromusa sp. 0.05 2 0 C 67799 Thermodesulfobacteria 0.05 2 0 O 188710 Thermodesulfobacteriales 0.05 2 0 F 188711 Thermodesulfobacteriaceae 0.05 2 0 G 2033601 Thermosulfuriphilus 0.05 2 2 S 1936021 Thermosulfuriphilus ammonigenes 0.02 1 0 C 3024418 Desulfobacteria 0.02 1 0 O 213118 Desulfobacterales 0.02 1 0 F 213119 Desulfobacteraceae 0.02 1 1 G 2289 Desulfobacter 0.02 1 0 C 3031451 Desulfobulbia 0.02 1 0 O 3024411 Desulfobulbales 0.02 1 0 F 213121 Desulfobulbaceae 0.02 1 0 G 1859128 Candidatus Electrothrix 0.02 1 0 G1 2637969 unclassified Candidatus Electrothrix 0.02 1 1 S 3126740 Candidatus Electrothrix sp. GW3-4 0.94 39 0 D1 1783270 FCB group 0.94 39 0 D2 68336 Bacteroidota/Chlorobiota group 0.91 38 0 P 976 Bacteroidota 0.34 14 0 C 117743 Flavobacteriia 0.34 14 3 O 200644 Flavobacteriales 0.12 5 0 O1 313602 Flavobacteriales incertae sedis 0.12 5 0 G 336809 Candidatus Karelsulcia 0.12 5 5 S 336810 Candidatus Karelsulcia muelleri 0.10 4 0 F 49546 Flavobacteriaceae 0.07 3 0 G 1016 Capnocytophaga 0.05 2 2 S 28188 Capnocytophaga canimorsus 0.02 1 1 S 1017 Capnocytophaga gingivalis 0.02 1 0 G 286104 Winogradskyella 0.02 1 0 G1 2615021 unclassified Winogradskyella 0.02 1 1 S 2749995 Winogradskyella sp. HaHa_3_26 0.05 2 0 F 2762318 Weeksellaceae 0.05 2 0 F1 2782232 Chryseobacterium group 0.05 2 2 G 59732 Chryseobacterium 0.31 13 0 C 768503 Cytophagia 0.31 13 0 O 768507 Cytophagales 0.10 4 0 F 89373 Cytophagaceae 0.10 4 0 G 107 Spirosoma 0.05 2 2 S 2666025 Spirosoma endbachense 0.05 2 2 S 2735870 Spirosoma taeanense 0.10 4 0 F 1853232 Hymenobacteraceae 0.07 3 3 G 89966 Hymenobacter 0.02 1 0 G 299566 Adhaeribacter 0.02 1 1 S 2745197 Adhaeribacter radiodurans 0.10 4 0 F 3141702 Leadbetterellaceae 0.10 4 3 G 312278 Emticicia 0.02 1 0 G1 2627301 unclassified Emticicia 0.02 1 1 S 2916755 Emticicia sp. 21SJ11W-3 0.02 1 0 F 200667 Flammeovirgaceae 0.02 1 1 G 59739 Flammeovirga 0.22 9 0 C 200643 Bacteroidia 0.22 9 0 O 171549 Bacteroidales 0.17 7 0 F 815 Bacteroidaceae 0.17 7 0 G 816 Bacteroides 0.14 6 6 S 818 Bacteroides thetaiotaomicron 0.02 1 1 S 817 Bacteroides fragilis 0.02 1 0 F 171552 Prevotellaceae 0.02 1 1 G 838 Prevotella 0.02 1 0 F 2005520 Dysgonomonadaceae 0.02 1 0 G 156973 Dysgonomonas 0.02 1 1 S 45254 Dysgonomonas capnocytophagoides 0.05 2 0 C 117747 Sphingobacteriia 0.05 2 0 O 200666 Sphingobacteriales 0.05 2 0 F 84566 Sphingobacteriaceae 0.02 1 1 G 28453 Sphingobacterium 0.02 1 0 G 423349 Mucilaginibacter 0.02 1 1 S 2682091 Mucilaginibacter ginkgonis 0.02 1 0 P 1090 Chlorobiota 0.02 1 0 C 191410 Chlorobiia 0.02 1 0 O 191411 Chlorobiales 0.02 1 0 F 2968741 Chloroherpetonaceae 0.02 1 0 G 100715 Chloroherpeton 0.02 1 0 S 100716 Chloroherpeton thalassium 0.02 1 1 S1 517418 Chloroherpeton thalassium ATCC 35110 0.70 29 0 D1 1783257 PVC group 0.31 13 0 P 204428 Chlamydiota 0.31 13 13 C 204429 Chlamydiia 0.19 8 0 P 74201 Verrucomicrobiota 0.10 4 0 P1 326457 Verrucomicrobiota incertae sedis 0.10 4 0 G 1541670 Methylacidimicrobium 0.10 4 4 G1 2730358 unclassified Methylacidimicrobium 0.07 3 0 C 414999 Opitutia 0.07 3 0 O 415001 Puniceicoccales 0.07 3 0 O1 3056381 Puniceicoccales incertae sedis 0.07 3 0 G 3049269 Candidatus Pelagisphaera 0.07 3 3 S 2684113 Candidatus Pelagisphaera phototrophica 0.02 1 0 C 203494 Verrucomicrobiia 0.02 1 0 O 48461 Verrucomicrobiales 0.02 1 0 F 203557 Verrucomicrobiaceae 0.02 1 0 G 2911469 Sulfuriroseicoccus 0.02 1 1 S 2707525 Sulfuriroseicoccus oceanibius 0.19 8 0 P 203682 Planctomycetota 0.12 5 0 C 2897345 Candidatus Uabimicrobiia 0.12 5 0 O 2897347 Candidatus Uabimicrobiales 0.12 5 0 F 2897348 Candidatus Uabimicrobiaceae 0.12 5 0 G 2897349 Candidatus Uabimicrobium 0.12 5 5 S 2596890 Candidatus Uabimicrobium amorphum 0.05 2 1 C 203683 Planctomycetia 0.02 1 0 O 2691354 Pirellulales 0.02 1 0 F 2691357 Pirellulaceae 0.02 1 0 G 123 Pirellula 0.02 1 0 G1 2639138 unclassified Pirellula 0.02 1 1 S 1632865 Pirellula sp. SH-Sr6A 0.02 1 0 C 666505 Phycisphaerae 0.02 1 0 O 1771349 Tepidisphaerales 0.02 1 0 F 1771355 Tepidisphaeraceae 0.02 1 0 G 2807511 Humisphaera 0.02 1 1 S 2807512 Humisphaera borealis 0.24 10 0 P 203691 Spirochaetota 0.24 10 0 C 203692 Spirochaetia 0.24 10 1 O 136 Spirochaetales 0.14 6 0 F 2845253 Treponemataceae 0.14 6 0 G 157 Treponema 0.12 5 5 S 409322 Treponema pedis 0.02 1 0 S 88058 Treponema primitia 0.02 1 1 S1 545694 Treponema primitia ZAS-2 0.07 3 0 F 1643685 Borreliaceae 0.07 3 0 G 64895 Borreliella 0.07 3 3 S 29519 Borreliella garinii 0.22 9 0 D1 2323 Bacteria incertae sedis 0.22 9 0 D2 1783234 Bacteria candidate phyla 0.22 9 0 D3 95901 Candidatus Dependentiae 0.22 9 0 C 2497643 Candidatus Babeliae 0.22 9 0 O 2497644 Candidatus Babeliales 0.22 9 0 F 2953756 Candidatus Chromulinivoraceae 0.22 9 0 G 2953757 Candidatus Chromulinivorax 0.22 9 9 S 2066483 Candidatus Chromulinivorax destructor 0.10 4 0 P 32066 Fusobacteriota 0.10 4 0 C 203490 Fusobacteriia 0.10 4 0 O 203491 Fusobacteriales 0.05 2 0 F 203492 Fusobacteriaceae 0.05 2 1 G 848 Fusobacterium 0.02 1 0 S 76857 Fusobacterium polymorphum 0.02 1 1 S1 393480 Fusobacterium polymorphum ATCC 10953 0.05 2 0 F 1129771 Leptotrichiaceae 0.05 2 1 G 32067 Leptotrichia 0.02 1 1 S 157691 Leptotrichia shahii 0.10 4 0 P 29547 Campylobacterota 0.10 4 0 C 3031852 Epsilonproteobacteria 0.10 4 0 O 213849 Campylobacterales 0.10 4 0 F 2932623 Sulfurospirillaceae 0.10 4 0 G 57665 Sulfurospirillum 0.10 4 0 S 66821 Sulfurospirillum multivorans 0.10 4 4 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.05 2 0 P 2818505 Myxococcota 0.05 2 0 P1 3031711 Polyangia 0.05 2 0 O 3031712 Polyangiales 0.05 2 0 F 49 Polyangiaceae 0.05 2 0 G 39643 Sorangium 0.05 2 2 S 56 Sorangium cellulosum 0.05 2 0 P 200783 Aquificota 0.05 2 0 C 187857 Aquificia 0.05 2 0 O 32069 Aquificales 0.05 2 0 F 224027 Hydrogenothermaceae 0.05 2 2 G 212790 Sulfurihydrogenibium 0.05 2 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.05 2 0 P 1293497 Nitrospinota 0.05 2 0 C 1293498 Nitrospinia 0.05 2 0 O 1293499 Nitrospinales 0.05 2 0 F 407032 Nitrospinaceae 0.05 2 0 G 35800 Nitrospina 0.05 2 2 S 1323948 Nitrospina watsonii 0.02 1 0 P 2138240 Coprothermobacterota 0.02 1 0 C 2138243 Coprothermobacteria 0.02 1 0 O 2138246 Coprothermobacterales 0.02 1 0 F 2138247 Coprothermobacteraceae 0.02 1 0 G 68335 Coprothermobacter 0.02 1 0 S 35786 Coprothermobacter proteolyticus 0.02 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.02 1 0 P 57723 Acidobacteriota 0.02 1 0 C 533205 Holophagae 0.02 1 0 O 574975 Holophagales 0.02 1 1 F 574976 Holophagaceae 0.02 1 0 P 3018035 Bdellovibrionota 0.02 1 0 C 3031419 Bacteriovoracia 0.02 1 0 O 2024979 Bacteriovoracales 0.02 1 0 F 1652132 Halobacteriovoraceae 0.02 1 0 G 1652133 Halobacteriovorax 0.02 1 0 G1 2639665 unclassified Halobacteriovorax 0.02 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 0.02 1 0 D 10239 Viruses 0.02 1 0 D1 2731341 Duplodnaviria 0.02 1 0 K 2731360 Heunggongvirae 0.02 1 0 P 2731618 Uroviricota 0.02 1 0 C 2731619 Caudoviricetes 0.02 1 0 F 2946167 Peduoviridae 0.02 1 0 G 2948703 Evevirus 0.02 1 0 S 2955874 Evevirus ev239 0.02 1 1 S1 2695847 Escherichia phage ESSI2_ev239