2.77 5052 5052 U 0 unclassified 97.23 177502 1 R 1 root 97.23 177493 2 R1 131567 cellular organisms 97.23 177489 2807 D 2 Bacteria 40.18 73353 320 P 1224 Pseudomonadota 20.41 37263 404 C 1236 Gammaproteobacteria 16.60 30298 0 O 135614 Lysobacterales 16.58 30268 32 F 32033 Lysobacteraceae 16.54 30186 1 G 338 Xanthomonas 16.53 30184 30184 S 29447 Xanthomonas albilineans 0.00 1 1 S 56448 Xanthomonas arboricola 0.01 22 14 G 40323 Stenotrophomonas 0.00 5 0 G1 995085 Stenotrophomonas maltophilia group 0.00 5 5 S 40324 Stenotrophomonas maltophilia 0.00 1 1 S 128780 Stenotrophomonas acidaminiphila 0.00 1 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2682487 Stenotrophomonas sp. SXG-1 0.00 1 1 S 2045451 Stenotrophomonas indicatrix 0.01 18 3 G 83618 Pseudoxanthomonas 0.01 15 15 S 314722 Pseudoxanthomonas suwonensis 0.00 7 1 G 68 Lysobacter 0.00 3 0 G1 2635362 unclassified Lysobacter 0.00 2 2 S 2290922 Lysobacter sp. TY2-98 0.00 1 1 S 2904252 Lysobacter sp. KIS68-7 0.00 1 1 S 435897 Lysobacter capsici 0.00 1 1 S 2795387 Lysobacter arenosi 0.00 1 1 S 2698682 Lysobacter oculi 0.00 2 0 G 83614 Luteimonas 0.00 1 1 S 1176533 Luteimonas granuli 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 1896164 Luteimonas sp. JM171 0.00 1 1 G 2370 Xylella 0.02 30 9 F 1775411 Rhodanobacteraceae 0.01 19 0 G 242605 Luteibacter 0.01 18 18 S 2911539 Luteibacter aegosomatissinici 0.00 1 1 S 564369 Luteibacter anthropi 0.00 1 0 G 75309 Rhodanobacter 0.00 1 1 S 666685 Rhodanobacter denitrificans 0.00 1 0 G 2233801 Ahniella 0.00 1 1 S 2021234 Ahniella affigens 1.32 2418 0 O 135625 Pasteurellales 1.32 2418 73 F 712 Pasteurellaceae 0.84 1532 86 G 724 Haemophilus 0.77 1402 1400 S 729 Haemophilus parainfluenzae 0.00 2 2 S1 888828 Haemophilus parainfluenzae ATCC 33392 0.01 27 27 S 735 Haemophilus parahaemolyticus 0.01 13 13 S 727 Haemophilus influenzae 0.00 3 3 S 726 Haemophilus haemolyticus 0.00 1 0 G1 2609962 unclassified Haemophilus 0.00 1 1 S 712310 Haemophilus sp. oral taxon 036 0.41 750 738 G 416916 Aggregatibacter 0.00 8 5 S 714 Aggregatibacter actinomycetemcomitans 0.00 3 3 S1 272556 Aggregatibacter actinomycetemcomitans HK1651 0.00 4 4 S 739 Aggregatibacter segnis 0.01 16 8 G 713 Actinobacillus 0.00 4 3 S 715 Actinobacillus pleuropneumoniae 0.00 1 0 S1 754344 Actinobacillus pleuropneumoniae serovar 6 0.00 1 1 S2 754256 Actinobacillus pleuropneumoniae serovar 6 str. Femo 0.00 4 0 S 67854 Actinobacillus succinogenes 0.00 4 4 S1 339671 Actinobacillus succinogenes 130Z 0.01 12 0 G 75984 Mannheimia 0.01 12 12 S 85404 Mannheimia varigena 0.00 8 1 G 155493 Gallibacterium 0.00 5 5 S 750 Gallibacterium anatis 0.00 2 2 S 505341 Gallibacterium salpingitidis 0.00 8 0 G 2899790 Mergibacter 0.00 8 8 S 221402 Mergibacter septicus 0.00 6 1 G 745 Pasteurella 0.00 5 3 S 747 Pasteurella multocida 0.00 2 2 S1 115545 Pasteurella multocida subsp. septica 0.00 5 0 G 2094023 Glaesserella 0.00 3 3 S 738 Glaesserella parasuis 0.00 2 0 G1 2629322 unclassified Glaesserella 0.00 2 2 S 2030797 Glaesserella sp. 15-184 0.00 2 2 G 292486 Avibacterium 0.00 2 0 G 1249016 Otariodibacter 0.00 2 2 S 1032623 Otariodibacter oris 0.00 1 0 G 109471 Bisgaardia 0.00 1 1 S 109472 Bisgaardia hudsonensis 0.00 1 0 G 214906 Histophilus 0.00 1 1 S 731 Histophilus somni 0.00 1 0 G 476528 Bibersteinia 0.00 1 1 S 47735 Bibersteinia trehalosi 0.00 1 0 G 1960084 Rodentibacter 0.00 1 1 S 2778911 Rodentibacter haemolyticus 0.83 1520 113 O 91347 Enterobacterales 0.57 1048 168 F 543 Enterobacteriaceae 0.20 357 1 G 561 Escherichia 0.19 354 331 S 562 Escherichia coli 0.00 8 8 S1 1322345 Escherichia coli ATCC 25922 0.00 4 4 S1 1446600 Escherichia coli O15:H18 0.00 3 0 S1 83334 Escherichia coli O157:H7 0.00 3 3 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 2 2 S1 439855 Escherichia coli SMS-3-5 0.00 2 2 S1 316435 Escherichia coli Nissle 1917 0.00 2 2 S1 2079157 Escherichia coli O2:H1 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.00 1 1 S1 331112 Escherichia coli HS 0.00 2 2 S 1499973 Escherichia marmotae 0.08 155 0 G 547 Enterobacter 0.08 150 0 G1 354276 Enterobacter cloacae complex 0.07 126 126 S 299767 Enterobacter ludwigii 0.01 20 20 S 158836 Enterobacter hormaechei 0.00 3 3 S 1812935 Enterobacter roggenkampii 0.00 1 1 S 208224 Enterobacter kobei 0.00 5 5 S 881260 Enterobacter bugandensis 0.08 141 0 F1 2890311 Klebsiella/Raoultella group 0.08 139 5 G 570 Klebsiella 0.05 94 83 S 573 Klebsiella pneumoniae 0.01 11 11 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.02 33 33 S 548 Klebsiella aerogenes 0.00 3 0 S 1463165 Klebsiella quasipneumoniae 0.00 3 3 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 1 S 571 Klebsiella oxytoca 0.00 1 0 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S 1134687 Klebsiella michiganensis 0.00 1 1 S 2153354 Klebsiella huaxiensis 0.00 2 0 G 160674 Raoultella 0.00 1 1 S 575 Raoultella planticola 0.00 1 0 G1 2627600 unclassified Raoultella 0.00 1 1 S 2799495 Raoultella sp. XY-1 0.07 119 1 G 590 Salmonella 0.06 118 11 S 28901 Salmonella enterica 0.06 107 3 S1 59201 Salmonella enterica subsp. enterica 0.01 26 26 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 23 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 12 12 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 8 8 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 3 3 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.01 14 14 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 12 12 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 7 2 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 3 3 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 5 3 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 2 2 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 4 4 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 2 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 2 2 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 2 2 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 2 2 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 1 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.00 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.02 40 32 F1 36866 unclassified Enterobacteriaceae 0.00 8 8 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 16 6 G 544 Citrobacter 0.00 8 0 G1 1344959 Citrobacter freundii complex 0.00 3 3 S 67828 Citrobacter gillenii 0.00 2 2 S 67827 Citrobacter werkmanii 0.00 2 2 S 1639133 Citrobacter portucalensis 0.00 1 1 S 546 Citrobacter freundii 0.00 1 0 S 35703 Citrobacter amalonaticus 0.00 1 1 S1 1261127 Citrobacter amalonaticus Y19 0.00 1 1 S 2971264 Citrobacter enshiensis 0.01 12 0 F1 191675 Enterobacteriaceae incertae sedis 0.01 12 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 9 0 F3 84564 ant endosymbionts 0.00 8 2 G 203804 Candidatus Blochmanniella 0.00 4 4 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 0 S 251535 Candidatus Blochmanniella vafra 0.00 1 1 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.00 1 1 S 251538 Candidatus Blochmannia ocreatus 0.00 1 0 G 1699619 Candidatus Westeberhardia 0.00 1 1 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.01 11 0 G 1330547 Kosakonia 0.01 11 11 S 208223 Kosakonia cowanii 0.01 10 0 G 2815296 Jejubacter 0.01 10 10 S 2579935 Jejubacter calystegiae 0.00 7 0 G 620 Shigella 0.00 7 7 S 623 Shigella flexneri 0.00 6 4 G 401618 Candidatus Riesia 0.00 2 2 S 401619 Candidatus Riesia pediculicola 0.00 2 0 G 1330545 Lelliottia 0.00 2 2 S 61646 Lelliottia amnigena 0.00 1 0 G 2303321 Superficieibacter 0.00 1 0 G1 2645744 unclassified Superficieibacter 0.00 1 1 S 3031919 Superficieibacter sp. HKU1 0.00 1 0 G 702 Plesiomonas 0.00 1 1 S 703 Plesiomonas shigelloides 0.00 1 0 G 409304 Candidatus Ishikawella 0.00 1 0 S 168169 Candidatus Ishikawella capsulata 0.00 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 1 0 G 1177214 Candidatus Profftia 0.00 1 0 G1 2735709 unclassified Candidatus Profftia 0.00 1 1 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.09 169 0 F 2812006 Bruguierivoracaceae 0.09 169 0 G 84565 Sodalis 0.09 162 162 S 2697027 Sodalis ligni 0.00 6 0 S 1486991 Candidatus Sodalis pierantonius 0.00 6 6 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.04 81 2 F 1903409 Erwiniaceae 0.03 49 27 G 53335 Pantoea 0.00 8 0 G1 1654067 Pantoea agglomerans group 0.00 8 8 S 549 Pantoea agglomerans 0.00 5 5 S 553 Pantoea ananatis 0.00 4 4 S 66269 Pantoea stewartii 0.00 2 2 S 59814 Pantoea dispersa 0.00 1 1 S 470931 Pantoea anthophila 0.00 1 1 S 470934 Pantoea vagans 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.01 23 0 G 551 Erwinia 0.01 22 22 S 1922217 Candidatus Erwinia haradaeae 0.00 1 1 S 55212 Erwinia rhapontici 0.00 7 0 G 32199 Buchnera 0.00 7 5 S 9 Buchnera aphidicola 0.00 1 1 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 1 1 S1 1241833 Buchnera aphidicola (Anoecia oenotherae) 0.04 69 0 F 1903411 Yersiniaceae 0.03 59 1 G 613 Serratia 0.02 45 45 S 138074 Serratia symbiotica 0.00 6 6 S 61652 Serratia rubidaea 0.00 3 3 S 614 Serratia liquefaciens 0.00 2 0 S 82996 Serratia plymuthica 0.00 2 2 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 615 Serratia marcescens 0.00 1 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 1 1 S 2785630 Serratia sp. CMO1 0.00 6 6 G 1927833 Candidatus Fukatsuia 0.00 4 0 G 629 Yersinia 0.00 3 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 3 0 S 632 Yersinia pestis 0.00 3 3 S1 748678 Yersinia pestis str. Pestoides B 0.00 1 1 S 935293 Yersinia entomophaga 0.01 23 1 F 1903414 Morganellaceae 0.00 8 0 G 637 Arsenophonus 0.00 5 0 G1 2627083 unclassified Arsenophonus 0.00 5 5 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 2 2 S 634113 Candidatus Arsenophonus lipoptenae 0.00 1 1 S 638 Arsenophonus nasoniae 0.00 7 0 G 581 Morganella 0.00 7 7 S 582 Morganella morganii 0.00 3 0 G 583 Proteus 0.00 3 3 S 584 Proteus mirabilis 0.00 2 1 G 626 Xenorhabdus 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 2 2 G 29487 Photorhabdus 0.01 15 8 F 1903410 Pectobacteriaceae 0.00 4 0 G 122277 Pectobacterium 0.00 2 2 S 2485124 Pectobacterium polonicum 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.00 3 1 G 204037 Dickeya 0.00 2 2 S 204039 Dickeya dianthicola 0.00 1 0 F 1903412 Hafniaceae 0.00 1 1 G 635 Edwardsiella 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 82984 Pragia 0.00 1 1 S 82985 Pragia fontium 0.74 1343 0 O 135615 Cardiobacteriales 0.74 1343 2 F 868 Cardiobacteriaceae 0.73 1328 17 G 2717 Cardiobacterium 0.47 855 0 G1 2648856 unclassified Cardiobacterium 0.47 855 855 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.25 456 456 S 2718 Cardiobacterium hominis 0.01 12 0 G 13275 Suttonella 0.01 12 0 G1 2908647 unclassified Suttonella 0.01 12 12 S 2908648 Suttonella sp. R2A3 0.00 1 0 G 869 Dichelobacter 0.00 1 1 S 870 Dichelobacter nodosus 0.29 529 0 O 2887326 Moraxellales 0.29 529 3 F 468 Moraxellaceae 0.28 513 286 G 469 Acinetobacter 0.06 102 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.04 82 79 S 470 Acinetobacter baumannii 0.00 3 3 S1 1279013 Acinetobacter baumannii PR07 0.01 14 9 S 48296 Acinetobacter pittii 0.00 5 5 S1 871585 Acinetobacter pittii PHEA-2 0.00 4 4 S 471 Acinetobacter calcoaceticus 0.00 2 2 S 1530123 Acinetobacter seifertii 0.03 55 5 G1 196816 unclassified Acinetobacter 0.03 46 46 S 2929509 Acinetobacter sp. NyZ410 0.00 2 2 S 3151491 Acinetobacter sp. ANC 7914 0.00 1 1 S 1608473 Acinetobacter sp. NCu2D-2 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.01 17 17 S 756892 Acinetobacter indicus 0.01 13 13 S 202956 Acinetobacter towneri 0.01 12 0 S 52133 Acinetobacter venetianus 0.01 12 12 S1 1197884 Acinetobacter venetianus VE-C3 0.01 11 11 S 70348 Acinetobacter dispersus 0.00 9 9 S 29430 Acinetobacter haemolyticus 0.00 3 3 S 40214 Acinetobacter johnsonii 0.00 2 2 S 106648 Acinetobacter bereziniae 0.00 1 1 S 280145 Acinetobacter colistiniresistens 0.00 1 0 S 1148157 Acinetobacter oleivorans 0.00 1 1 S1 436717 Acinetobacter oleivorans DR1 0.00 1 1 S 108980 Acinetobacter ursingii 0.01 11 7 G 475 Moraxella 0.00 3 3 S 2904120 Moraxella nasibovis 0.00 1 1 S 386891 Moraxella bovoculi 0.00 2 0 G 497 Psychrobacter 0.00 2 0 G1 196806 unclassified Psychrobacter 0.00 2 2 S 1415574 Psychrobacter sp. LV10R520-6 0.15 265 0 O 72274 Pseudomonadales 0.14 261 16 F 135621 Pseudomonadaceae 0.13 237 162 G 286 Pseudomonas 0.01 21 9 G1 196821 unclassified Pseudomonas 0.00 2 2 S 1649877 Pseudomonas sp. CCOS 191 0.00 1 1 S 2954080 Pseudomonas sp. FP1762 0.00 1 1 S 2921518 Pseudomonas sp. FSL L8-0168 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 1500686 Pseudomonas sp. Os17 0.00 1 1 S 2895480 Pseudomonas sp. B21-028 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 2871095 Pseudomonas sp. DR48 0.00 1 1 S 2954092 Pseudomonas sp. FP2335 0.00 1 1 S 2025658 Pseudomonas sp. NS1(2017) 0.00 1 1 S 2954094 Pseudomonas sp. FP453 0.01 13 0 G1 136843 Pseudomonas fluorescens group 0.00 7 1 S 47883 Pseudomonas synxantha 0.00 6 6 S1 96901 Pseudomonas synxantha BG33R 0.00 3 3 S 183795 Pseudomonas mediterranea 0.00 2 2 S 47878 Pseudomonas azotoformans 0.00 1 0 S 294 Pseudomonas fluorescens 0.00 1 1 S1 1038922 Pseudomonas fluorescens Q2-87 0.01 13 0 G1 136841 Pseudomonas aeruginosa group 0.01 12 12 S 287 Pseudomonas aeruginosa 0.00 1 1 S 300 Pseudomonas mendocina 0.00 9 1 G1 136845 Pseudomonas putida group 0.00 4 4 S 303 Pseudomonas putida 0.00 4 4 S 78327 Pseudomonas mosselii 0.00 4 4 S 2738125 Pseudomonas hefeiensis 0.00 3 0 G1 136849 Pseudomonas syringae group 0.00 3 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 3 2 S 317 Pseudomonas syringae 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 3 3 S 437900 Pseudomonas marincola 0.00 2 2 S 244566 Pseudomonas lurida 0.00 2 2 S 2894079 Pseudomonas oryziphila 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 296 Pseudomonas fragi 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.00 1 1 S 2842346 Pseudomonas siliginis 0.00 1 1 S 46677 Pseudomonas agarici 0.00 3 0 G 2901164 Stutzerimonas 0.00 3 0 G1 136846 Stutzerimonas stutzeri group 0.00 3 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 3 3 S 316 Stutzerimonas stutzeri 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 2 0 G 2901189 Halopseudomonas 0.00 2 2 S 797277 Halopseudomonas litoralis 0.00 1 1 G 2758906 Entomomonas 0.00 2 0 F 2887365 Marinobacteraceae 0.00 2 1 G 2742 Marinobacter 0.00 1 1 G1 83889 unclassified Marinobacter 0.00 2 0 F 3085096 Ketobacteraceae 0.00 2 0 G 2025617 Ketobacter 0.00 2 2 S 1917421 Ketobacter alkanivorans 0.06 110 0 O 135623 Vibrionales 0.06 110 32 F 641 Vibrionaceae 0.04 68 26 G 662 Vibrio 0.01 20 0 S 52443 Vibrio tapetis 0.01 20 20 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 7 2 G1 2614977 unclassified Vibrio 0.00 4 4 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 6 6 S 2572923 Vibrio taketomensis 0.00 5 5 S 666 Vibrio cholerae 0.00 4 0 G1 717610 Vibrio harveyi group 0.00 2 2 S 669 Vibrio harveyi 0.00 2 2 S 670 Vibrio parahaemolyticus 0.00 8 2 G 657 Photobacterium 0.00 6 4 S 553611 Photobacterium leiognathi 0.00 2 2 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 2 0 G 511678 Aliivibrio 0.00 1 0 S 668 Aliivibrio fischeri 0.00 1 1 S1 1088719 Aliivibrio fischeri SR5 0.00 1 0 S 40269 Aliivibrio salmonicida 0.00 1 1 S1 316275 Aliivibrio salmonicida LFI1238 0.06 108 0 O 135622 Alteromonadales 0.05 87 0 F 267888 Pseudoalteromonadaceae 0.05 86 0 G 2834759 Flocculibacter 0.05 86 86 S 2744479 Flocculibacter collagenilyticus 0.00 1 0 G 53246 Pseudoalteromonas 0.00 1 0 G1 194690 unclassified Pseudoalteromonas 0.00 1 1 S 649161 Pseudoalteromonas sp. 3J6 0.01 12 0 F 267890 Shewanellaceae 0.01 12 1 G 22 Shewanella 0.00 6 4 G1 196818 unclassified Shewanella 0.00 2 2 S 2590015 Shewanella sp. SNU WT4 0.00 4 4 S 62322 Shewanella baltica 0.00 1 1 S 712036 Shewanella dokdonensis 0.00 7 0 F 72275 Alteromonadaceae 0.00 4 0 F1 2903219 Alteromonas/Salinimonas group 0.00 4 0 G 226 Alteromonas 0.00 4 0 G1 2614992 unclassified Alteromonas 0.00 4 4 S 2267264 Alteromonas sp. RKMC-009 0.00 3 1 G 261825 Agarivorans 0.00 1 1 S 182262 Agarivorans albus 0.00 1 1 S 680279 Agarivorans gilvus 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 1 G1 2637987 unclassified Moritella 0.00 1 1 F 267893 Idiomarinaceae 0.03 56 1 O 135619 Oceanospirillales 0.01 22 3 F 28256 Halomonadaceae 0.01 13 0 F1 114403 Zymobacter group 0.00 9 0 G 235572 Candidatus Portiera 0.00 9 9 S 91844 Candidatus Portiera aleyrodidarum 0.00 2 0 G 33073 Zymobacter 0.00 2 2 S 33074 Zymobacter palmae 0.00 2 0 G 114185 Candidatus Carsonella 0.00 2 0 S 114186 Candidatus Carsonella ruddii 0.00 2 2 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.00 6 0 G 2745 Halomonas 0.00 6 6 S 3031727 Halomonas piscis 0.01 20 3 F 135620 Oceanospirillaceae 0.01 10 0 G 267849 Nitrincola 0.01 10 10 S 2614693 Nitrincola iocasae 0.00 4 0 G 28253 Marinomonas 0.00 3 3 S 2773454 Marinomonas algicola 0.00 1 1 S 119864 Marinomonas mediterranea 0.00 1 0 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 0 G 459520 Neptuniibacter 0.00 1 1 S 651666 Neptuniibacter halophilus 0.00 1 0 G 515417 Amphritea 0.00 1 1 S 452627 Amphritea japonica 0.00 9 0 F 255527 Saccharospirillaceae 0.00 6 0 G 230494 Reinekea 0.00 6 6 S 1336806 Reinekea forsetii 0.00 3 0 G 231683 Saccharospirillum 0.00 3 3 S 2161747 Saccharospirillum mangrovi 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 0 G 3020833 Isoalcanivorax 0.00 1 0 S 1306787 Isoalcanivorax pacificus 0.00 1 1 S1 391936 Isoalcanivorax pacificus W11-5 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.00 1 0 F 2823145 Pleioneaceae 0.00 1 0 G 1502941 Pleionea 0.00 1 1 S 3070815 Pleionea litopenaei 0.03 46 0 O 1240482 Orbales 0.03 46 3 F 1240483 Orbaceae 0.02 41 0 G 2894762 Zophobihabitans 0.02 41 41 S 1635327 Zophobihabitans entericus 0.00 2 2 G 1193503 Gilliamella 0.02 32 0 O 135618 Methylococcales 0.02 31 4 F 403 Methylococcaceae 0.01 22 0 G 39773 Methylomicrobium 0.01 22 0 S 39775 Methylomicrobium album 0.01 22 22 S1 686340 Methylomicrobium album BG8 0.00 2 2 G 416 Methylomonas 0.00 1 0 G 429 Methylobacter 0.00 1 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2911520 Methylobacter sp. YRD-M1 0.00 1 0 G 1295378 Methylogaea 0.00 1 1 S 1295382 Methylogaea oryzae 0.00 1 0 G 1808977 Candidatus Methylospira 0.00 1 1 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 F 1486721 Methylothermaceae 0.00 1 1 G 1486720 Methylomarinovum 0.02 32 0 O 135624 Aeromonadales 0.02 31 2 F 84642 Aeromonadaceae 0.01 22 6 G 642 Aeromonas 0.01 10 10 S 654 Aeromonas veronii 0.00 2 2 S 650 Aeromonas jandaei 0.00 1 1 S 652 Aeromonas schubertii 0.00 1 1 S 29489 Aeromonas enteropelogenes 0.00 1 1 S 196024 Aeromonas dhakensis 0.00 1 1 S 73010 Aeromonas encheleia 0.00 3 0 G 225143 Oceanisphaera 0.00 3 3 S 1903694 Oceanisphaera avium 0.00 2 0 G 43947 Tolumonas 0.00 1 1 S 43948 Tolumonas auensis 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 1 0 G 347533 Zobellella 0.00 1 1 S 347534 Zobellella denitrificans 0.00 1 0 G 2802288 Dongshaea 0.00 1 1 S 2047966 Dongshaea marina 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.01 24 0 C1 118884 Gammaproteobacteria incertae sedis 0.01 13 0 G 2738850 Candidatus Reidiella 0.01 13 13 S 2738883 Candidatus Reidiella endopervernicosa 0.00 6 0 G 1076625 Candidatus Steffania 0.00 6 6 S 1076626 Candidatus Steffania adelgidicola 0.00 2 0 C2 32036 sulfur-oxidizing symbionts 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 2 2 S 2738852 Candidatus Ruthia endofausta 0.00 1 0 G 198346 Candidatus Palibaumannia 0.00 1 0 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 1 1 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 F 412032 Celerinatantimonadaceae 0.00 1 0 G 412033 Celerinatantimonas 0.00 1 1 S 412034 Celerinatantimonas diazotrophica 0.01 23 0 O 135613 Chromatiales 0.01 15 1 F 1046 Chromatiaceae 0.00 4 1 G 67575 Rheinheimera 0.00 3 0 G1 115860 unclassified Rheinheimera 0.00 3 3 S 3072790 Rheinheimera sp. MMS21-TC3 0.00 3 0 G 85072 Allochromatium 0.00 3 3 S 553982 Allochromatium tepidum 0.00 3 0 G 156885 Thioflavicoccus 0.00 3 0 S 80679 Thioflavicoccus mobilis 0.00 3 3 S1 765912 Thioflavicoccus mobilis 8321 0.00 2 2 G 1227 Nitrosococcus 0.00 1 1 G 1056 Thiocapsa 0.00 1 0 G 53392 Thiodictyon 0.00 1 1 S 1166950 Candidatus Thiodictyon syntrophicum 0.00 3 0 F 72276 Ectothiorhodospiraceae 0.00 1 0 G 133193 Alkalilimnicola 0.00 1 0 S 351052 Alkalilimnicola ehrlichii 0.00 1 1 S1 187272 Alkalilimnicola ehrlichii MLHE-1 0.00 1 0 G 233099 Ectothiorhodosinus 0.00 1 1 S 233100 Ectothiorhodosinus mongolicus 0.00 1 0 G 1335745 Spiribacter 0.00 1 0 G1 2629425 unclassified Spiribacter 0.00 1 1 S 2666185 Spiribacter sp. 2438 0.00 2 0 F 255526 Halothiobacillaceae 0.00 2 1 G 109262 Halothiobacillus 0.00 1 0 S 927 Halothiobacillus neapolitanus 0.00 1 1 S1 555778 Halothiobacillus neapolitanus c2 0.00 1 0 F 449719 Granulosicoccaceae 0.00 1 0 G 437504 Granulosicoccus 0.00 1 0 S 437505 Granulosicoccus antarcticus 0.00 1 1 S1 1192854 Granulosicoccus antarcticus IMCC3135 0.00 1 0 F 2035710 Thioalkalibacteraceae 0.00 1 0 G 2035712 Guyparkeria 0.00 1 1 S 47960 Guyparkeria halophila 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 1913444 Candidatus Thiodiazotropha 0.00 1 1 S 3065865 Candidatus Thiodiazotropha sp. CDECU1 0.01 22 1 O 72273 Thiotrichales 0.00 8 0 F 2056687 Fastidiosibacteraceae 0.00 8 0 G 2056696 Cysteiniphilum 0.00 8 0 G1 2610889 unclassified Cysteiniphilum 0.00 8 8 S 2975055 Cysteiniphilum sp. QT6929 0.00 7 0 F 135616 Piscirickettsiaceae 0.00 2 1 G 933 Thiomicrospira 0.00 1 1 S 406020 Thiomicrospira microaerophila 0.00 2 2 G 34067 Cycloclasticus 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 0 G 28884 Hydrogenovibrio 0.00 1 1 S 39765 Hydrogenovibrio crunogenus 0.00 1 1 G 2039723 Thiomicrorhabdus 0.00 3 1 F 34064 Francisellaceae 0.00 2 2 G 262 Francisella 0.00 3 0 F 135617 Thiotrichaceae 0.00 3 3 G 1030 Thiothrix 0.00 9 0 O 118969 Legionellales 0.00 9 0 F 118968 Coxiellaceae 0.00 5 3 G 254245 Aquicella 0.00 2 2 S 254247 Aquicella siphonis 0.00 2 0 G 776 Coxiella 0.00 2 2 S 777 Coxiella burnetii 0.00 1 1 G 59195 Rickettsiella 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.00 9 0 O 1706369 Cellvibrionales 0.00 5 3 F 1706372 Halieaceae 0.00 2 0 G 3040948 Candidatus Paraluminiphilus 0.00 2 2 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 2 0 F 1706375 Spongiibacteraceae 0.00 2 0 G 1084558 Oceanicoccus 0.00 2 2 S 716816 Oceanicoccus sagamiensis 0.00 1 0 F 1706371 Cellvibrionaceae 0.00 1 1 G 2425 Teredinibacter 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 1 S 435905 Microbulbifer celer 0.00 6 0 C1 33811 unclassified Gammaproteobacteria 0.00 6 6 S 650377 endosymbiont of Euscepes postfasciatus 0.00 4 0 O 1775403 Nevskiales 0.00 4 4 F 568386 Nevskiaceae 0.00 4 0 O 2975284 Candidatus Comchoanobacterales 0.00 4 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 4 0 G 2975286 Candidatus Comchoanobacter 0.00 4 4 S 2919598 Candidatus Comchoanobacter bicostacola 0.00 1 0 O 742030 Salinisphaerales 0.00 1 0 F 742031 Salinisphaeraceae 0.00 1 0 G 180541 Salinisphaera 0.00 1 0 G1 2649847 unclassified Salinisphaera 0.00 1 1 S 2183911 Salinisphaera sp. LB1 13.56 24756 112 C 28216 Betaproteobacteria 7.30 13328 57 O 206351 Neisseriales 7.26 13256 6974 F 481 Neisseriaceae 2.14 3908 761 G 482 Neisseria 0.57 1045 1039 S 495 Neisseria elongata 0.00 6 6 S1 88719 Neisseria elongata subsp. glycolytica 0.44 806 698 S 487 Neisseria meningitidis 0.06 108 108 S1 942513 Neisseria meningitidis WUE 2594 0.31 566 566 S 485 Neisseria gonorrhoeae 0.20 367 367 S 28449 Neisseria subflava 0.05 87 87 S 1853278 Neisseria chenwenguii 0.04 76 76 S 486 Neisseria lactamica 0.03 59 59 S 607712 Neisseria shayeganii 0.02 29 0 G1 2623750 unclassified Neisseria 0.01 13 13 S 2912675 Neisseria sp. Dent CA1/247 0.00 9 0 S 641148 Neisseria sp. oral taxon 014 0.00 9 9 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.00 7 7 S 655307 Neisseria sp. KEM232 0.01 27 27 S 267212 Neisseria bacilliformis 0.01 24 24 S 484 Neisseria flavescens 0.01 24 24 S 1470200 Neisseria arctica 0.00 8 8 S 2995413 Neisseria leonii 0.00 6 6 S 194197 Neisseria dentiae 0.00 5 5 S 490 Neisseria sicca 0.00 5 0 S 496 Neisseria macacae 0.00 5 5 S1 997348 Neisseria macacae ATCC 33926 0.00 4 4 S 1815583 Neisseria musculi 0.00 4 4 S 2666100 Neisseria brasiliensis 0.00 3 3 S 493 Neisseria canis 0.00 1 1 S 1853276 Neisseria weixii 0.00 1 1 S 488 Neisseria mucosa 1.09 1985 0 G 32257 Kingella 1.07 1961 1961 S 505 Kingella oralis 0.01 17 17 S 502 Kingella denitrificans 0.00 7 7 S 1522312 Kingella negevensis 0.12 226 0 G 538 Eikenella 0.12 223 223 S 539 Eikenella corrodens 0.00 3 3 S 2528037 Eikenella exigua 0.03 60 60 G 59 Vitreoscilla 0.02 37 0 G 2593687 Aquella 0.02 37 37 S 2067065 Aquella oligotrophica 0.01 24 0 G 334107 Conchiformibius 0.01 24 24 S 153493 Conchiformibius steedae 0.01 17 2 G 1193515 Snodgrassella 0.01 15 15 S 2946699 Snodgrassella communis 0.01 13 0 G 2898489 Paralysiella 0.01 13 13 S 2809020 Paralysiella testudinis 0.00 8 0 G 2944815 Wielerella 0.00 8 8 S 2917790 Wielerella bovis 0.00 2 0 G 71 Simonsiella 0.00 2 2 S 72 Simonsiella muelleri 0.00 2 0 G 299568 Uruburuella 0.00 2 2 S 252130 Uruburuella suis 0.00 8 3 F 2897177 Chitinibacteraceae 0.00 4 0 G 240411 Chitinimonas 0.00 4 4 S 2594795 Chitinimonas arctica 0.00 1 0 G 885864 Jeongeupia 0.00 1 1 G1 2619593 unclassified Jeongeupia 0.00 6 0 F 2897176 Aquaspirillaceae 0.00 6 0 G 168470 Laribacter 0.00 6 6 S 168471 Laribacter hongkongensis 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 1 G 407217 Aquitalea 6.13 11192 64 O 80840 Burkholderiales 5.93 10821 63 F 119060 Burkholderiaceae 5.71 10424 0 G 47670 Lautropia 5.71 10424 10422 S 47671 Lautropia mirabilis 0.00 2 2 S1 887898 Lautropia mirabilis ATCC 51599 0.11 192 3 G 32008 Burkholderia 0.07 126 0 G1 111527 pseudomallei group 0.07 125 0 S 28450 Burkholderia pseudomallei 0.07 125 125 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S 57975 Burkholderia thailandensis 0.03 47 1 G1 87882 Burkholderia cepacia complex 0.02 44 44 S 152500 Burkholderia dolosa 0.00 2 2 S 95485 Burkholderia stabilis 0.01 16 0 G1 2613784 unclassified Burkholderia 0.01 16 16 S 1494466 Burkholderia sp. FERM BP-3421 0.05 85 4 G 48736 Ralstonia 0.04 80 0 G1 3116862 Ralstonia solanacearum species complex 0.04 78 78 S 305 Ralstonia solanacearum 0.00 2 2 S 1310165 Ralstonia pseudosolanacearum 0.00 1 1 S 105219 Ralstonia mannitolilytica 0.01 16 7 G 106589 Cupriavidus 0.00 9 9 S 367825 Cupriavidus malaysiensis 0.01 10 0 G 44013 Polynucleobacter 0.00 9 9 S 576610 Polynucleobacter necessarius 0.00 1 0 G1 2640945 unclassified Polynucleobacter 0.00 1 1 S 1855910 Polynucleobacter sp. MWH-S4W17 0.01 10 9 G 1810868 Mycoavidus 0.00 1 0 G1 2649241 unclassified Mycoavidus 0.00 1 1 S 2651972 Mycoavidus sp. B2-EB 0.00 7 2 G 1822464 Paraburkholderia 0.00 3 3 S 2571748 Paraburkholderia acidisoli 0.00 1 1 S 92647 Paraburkholderia tropica 0.00 1 0 G1 2615204 unclassified Paraburkholderia 0.00 1 1 S 1926494 Paraburkholderia sp. SOS3 0.00 7 0 G 2038280 Robbsia 0.00 7 0 G1 2636574 unclassified Robbsia 0.00 7 7 S 3149231 Robbsia sp. KACC 23696 0.00 4 0 G 2680021 Ephemeroptericola 0.00 4 4 S 2268024 Ephemeroptericola cinctiostellae 0.00 2 2 G 93217 Pandoraea 0.00 1 0 G 2571160 Trinickia 0.00 1 1 S 28094 Trinickia caryophylli 0.11 195 17 F 75682 Oxalobacteraceae 0.06 103 0 G 401469 Undibacterium 0.06 102 27 G1 2630295 unclassified Undibacterium 0.04 74 74 S 3048609 Undibacterium sp. CCC3.4 0.00 1 1 S 2058624 Undibacterium sp. KW1 0.00 1 1 S 401471 Undibacterium parvum 0.02 41 39 G 29580 Janthinobacterium 0.00 2 0 G1 2610881 unclassified Janthinobacterium 0.00 2 2 S 3065910 Janthinobacterium sp. J1-1 0.01 18 2 F1 2895353 Telluria group 0.01 15 2 G 149698 Massilia 0.00 7 7 S 945844 Massilia oculi 0.00 5 1 G1 2609279 unclassified Massilia 0.00 3 3 S 1707785 Massilia sp. WG5 0.00 1 1 S 3064278 Massilia sp. R2A-15 0.00 1 1 S 457921 Massilia varians 0.00 1 0 G 34069 Telluria 0.00 1 1 S 34071 Telluria mixta 0.01 12 0 G 884214 Candidatus Zinderia 0.01 12 0 G1 3077950 unclassified Candidatus Zinderia 0.01 12 12 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 3 0 G 1229970 Glaciimonas 0.00 3 0 G1 2644401 unclassified Glaciimonas 0.00 3 3 S 2807626 Glaciimonas sp. PAMC28666 0.00 1 0 G 1344552 Noviherbaspirillum 0.00 1 0 G1 2617509 unclassified Noviherbaspirillum 0.00 1 1 S 2601898 Noviherbaspirillum sp. UKPF54 0.03 50 5 F 80864 Comamonadaceae 0.01 19 19 G 80865 Delftia 0.00 8 8 G 34072 Variovorax 0.00 8 0 G 219181 Ottowia 0.00 8 0 G1 2645081 unclassified Ottowia 0.00 7 7 S 1658672 Ottowia sp. oral taxon 894 0.00 1 1 S 3081231 Ottowia sp. SB7-C50 0.00 2 2 G 47420 Hydrogenophaga 0.00 2 1 G 238749 Diaphorobacter 0.00 1 0 G1 2649760 unclassified Diaphorobacter 0.00 1 1 S 2714924 Diaphorobacter sp. HDW4A 0.00 2 0 G 283 Comamonas 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 1 1 S 2743470 Comamonas antarctica 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 3051137 Paracidovorax 0.00 1 1 S 80867 Paracidovorax avenae 0.00 1 0 G 1649468 Melaminivora 0.00 1 1 S 2109913 Melaminivora suipulveris 0.02 37 9 F 506 Alcaligenaceae 0.01 12 0 G 222 Achromobacter 0.01 11 11 S 217204 Achromobacter insolitus 0.00 1 1 S 2069367 Achromobacter veterisilvae 0.00 4 1 G 29574 Taylorella 0.00 3 3 S 29575 Taylorella equigenitalis 0.00 4 1 G 90243 Oligella 0.00 3 3 S 90244 Oligella ureolytica 0.00 3 0 G 1100891 Paenalcaligenes 0.00 3 3 S 2980099 Paenalcaligenes faecalis 0.00 2 0 G 1472344 Basilea 0.00 2 0 S 1472345 Basilea psittacipulmonis 0.00 2 2 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 2 0 G 290425 Advenella 0.00 2 2 S 1481665 Advenella alkanexedens 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.01 12 0 O1 224471 Burkholderiales genera incertae sedis 0.00 8 5 G 32012 Thiomonas 0.00 3 0 G1 2625466 unclassified Thiomonas 0.00 3 3 S 1050370 Thiomonas sp. X19 0.00 2 0 G 2929841 Candidatus Ichthyocystis 0.00 2 2 S 1561003 Candidatus Ichthyocystis hellenicum 0.00 1 0 G 54066 Xylophilus 0.00 1 1 S 2697032 Xylophilus rhododendri 0.00 1 0 G 114248 Tepidimonas 0.00 1 1 S 307486 Tepidimonas taiwanensis 0.00 7 0 F 995019 Sutterellaceae 0.00 3 1 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.00 1 1 S 2494234 Sutterella megalosphaeroides 0.00 3 0 G 1918598 Turicimonas 0.00 3 3 S 1796652 Turicimonas muris 0.00 1 0 G 1980697 Duodenibacillus 0.00 1 1 S 1852381 Duodenibacillus massiliensis 0.00 6 0 F 2975441 Sphaerotilaceae 0.00 5 5 G 196013 Caldimonas 0.00 1 0 G 1114981 Piscinibacter 0.00 1 0 G1 2627988 unclassified Piscinibacter 0.00 1 1 S 3037797 Piscinibacter sp. XHJ-5 0.04 79 14 O 32003 Nitrosomonadales 0.02 31 13 F 206379 Nitrosomonadaceae 0.01 18 13 G 914 Nitrosomonas 0.00 4 0 G1 2609265 unclassified Nitrosomonas 0.00 3 3 S 2741553 Nitrosomonas sp. H1_AOB3 0.00 1 1 S 261292 Nitrosomonas sp. Is79A3 0.00 1 1 S 44577 Nitrosomonas ureae 0.00 9 7 F 90627 Gallionellaceae 0.00 2 0 G 2249462 Ferrigenium 0.00 2 2 S 1682490 Ferrigenium kumadai 0.00 9 0 F 2008790 Thiobacillaceae 0.00 8 0 G 1938335 Sulfuritortus 0.00 8 8 S 1914471 Sulfuritortus calidifontis 0.00 1 1 G 919 Thiobacillus 0.00 7 3 F 32011 Methylophilaceae 0.00 2 0 G 16 Methylophilus 0.00 2 2 S 17 Methylophilus methylotrophus 0.00 2 0 G 404 Methylobacillus 0.00 2 0 S 405 Methylobacillus flagellatus 0.00 2 2 S1 265072 Methylobacillus flagellatus KT 0.00 4 0 F 2008793 Sterolibacteriaceae 0.00 3 0 G 3050898 Sulfuricystis 0.00 2 2 S 2211108 Sulfuricystis multivorans 0.00 1 1 S 2496847 Sulfuricystis thermophila 0.00 1 0 G 157591 Sterolibacterium 0.00 1 1 S 157592 Sterolibacterium denitrificans 0.00 3 0 F 2772226 Sulfuricellaceae 0.00 3 2 G 1778653 Sulfuriferula 0.00 1 1 S 171865 Sulfuriferula plumbiphila 0.00 2 0 F 2803844 Usitatibacteraceae 0.00 2 2 G 2803845 Usitatibacter 0.02 43 0 C1 119066 Betaproteobacteria incertae sedis 0.01 18 0 G 1301080 Candidatus Nasuia 0.01 18 18 S 1160784 Candidatus Nasuia deltocephalinicola 0.01 14 6 G 1381133 Candidatus Profftella 0.00 6 6 S 669502 Candidatus Profftella armatura 0.00 2 2 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.01 11 0 G 33055 Candidatus Kinetoplastibacterium 0.00 7 7 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 4 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.00 4 4 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 0.00 2 0 O 206389 Rhodocyclales 0.00 1 0 F 75787 Rhodocyclaceae 0.00 1 0 G 146937 Azospira 0.00 1 1 S 2785627 Azospira inquinata 0.00 1 0 F 2008795 Azonexaceae 0.00 1 0 G 88875 Ferribacterium 0.00 1 1 S 76259 Ferribacterium limneticum 6.03 11004 92 C 28211 Alphaproteobacteria 5.48 9999 20 O 204441 Rhodospirillales 5.42 9896 0 F 2844601 Stellaceae 5.42 9896 0 G 93 Stella 5.42 9896 9896 S 94 Stella humosa 0.04 76 12 F 433 Acetobacteraceae 0.03 60 0 G 512381 Acidisoma 0.03 60 0 G1 2634065 unclassified Acidisoma 0.03 60 60 S 3040935 Acidisoma sp. PAMC 29798 0.00 2 0 G 504465 Rhodovastum 0.00 2 2 S 504468 Rhodovastum atsumiense 0.00 1 1 G 522 Acidiphilium 0.00 1 0 G 2870717 Pseudoroseomonas 0.00 1 1 S 204525 Pseudoroseomonas cervicalis 0.00 6 0 F 41295 Rhodospirillaceae 0.00 6 0 G 111830 Defluviicoccus 0.00 6 6 S 111831 Defluviicoccus vanus 0.00 1 0 F 3031145 Novispirillaceae 0.00 1 0 G 1804663 Haematospirillum 0.00 1 1 S 1549855 Haematospirillum jordaniae 0.38 686 14 O 356 Hyphomicrobiales 0.32 586 360 F 119045 Methylobacteriaceae 0.11 207 153 G 407 Methylobacterium 0.01 21 0 S 31998 Methylobacterium radiotolerans 0.01 21 21 S1 426355 Methylobacterium radiotolerans JCM 2831 0.01 14 4 G1 2615210 unclassified Methylobacterium 0.00 4 4 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 3 3 S 426117 Methylobacterium sp. 4-46 0.00 3 3 S 2984843 Methylobacterium sp. FF17 0.01 12 12 S 410 Methylobacterium organophilum 0.00 5 5 S 570505 Methylobacterium bullatum 0.00 1 1 S 334852 Methylobacterium oryzae 0.00 1 1 S 2051553 Methylobacterium currus 0.01 14 13 G 186650 Microvirga 0.00 1 1 S 2651334 Microvirga thermotolerans 0.00 5 1 G 2282523 Methylorubrum 0.00 4 2 S 408 Methylorubrum extorquens 0.00 2 2 S1 272630 Methylorubrum extorquens AM1 0.03 54 4 F 82115 Rhizobiaceae 0.03 46 32 F1 227290 Rhizobium/Agrobacterium group 0.01 10 0 G 379 Rhizobium 0.00 9 0 S 384 Rhizobium leguminosarum 0.00 9 9 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 0 S 398 Rhizobium tropici 0.00 1 1 S1 698761 Rhizobium tropici CIAT 899 0.00 2 0 G 1612611 Pararhizobium 0.00 2 1 G1 2643050 unclassified Pararhizobium 0.00 1 1 S 3067904 Pararhizobium sp. IMCC3301 0.00 1 0 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 1 S 358 Agrobacterium tumefaciens 0.00 1 0 G 1525371 Neorhizobium 0.00 1 0 G1 2629175 unclassified Neorhizobium 0.00 1 1 S 2978974 Neorhizobium sp. CSC1952 0.00 3 2 G 34019 Liberibacter 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 28105 Sinorhizobium 0.00 1 0 S 382 Sinorhizobium meliloti 0.00 1 1 S1 1041157 Sinorhizobium meliloti WSM1022 0.01 11 0 F 2831106 Devosiaceae 0.00 8 7 G 46913 Devosia 0.00 1 0 G1 196773 unclassified Devosia 0.00 1 1 S 2083786 Devosia sp. I507 0.00 2 0 G 3064792 Mariluticola 0.00 2 2 S 2909283 Mariluticola halotolerans 0.00 1 0 G 1082930 Pelagibacterium 0.00 1 1 S 531813 Pelagibacterium halotolerans 0.00 6 0 F 41294 Nitrobacteraceae 0.00 6 1 G 374 Bradyrhizobium 0.00 2 2 S 255045 Bradyrhizobium canariense 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 3039154 Bradyrhizobium sp. CB1717 0.00 1 1 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 1 S 2840469 Bradyrhizobium sediminis 0.00 4 1 F 2813035 Parvibaculaceae 0.00 3 0 G 256616 Parvibaculum 0.00 3 0 S 256618 Parvibaculum lavamentivorans 0.00 3 3 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 4 0 F 255475 Aurantimonadaceae 0.00 4 4 G 414371 Aureimonas 0.00 1 0 F 2831100 Boseaceae 0.00 1 0 G 85413 Bosea 0.00 1 1 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.00 1 0 F 2821832 Stappiaceae 0.00 1 0 G 150830 Roseibium 0.00 1 0 G1 1936170 environmental samples 0.00 1 1 S 1936171 uncultured Roseibium sp. 0.00 1 0 F 2685818 Amorphaceae 0.00 1 0 G 1904377 Acuticoccus 0.00 1 1 G1 2631034 unclassified Acuticoccus 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 212791 Enhydrobacter 0.00 1 0 G1 2632691 unclassified Enhydrobacter 0.00 1 1 S 1894999 Enhydrobacter sp. 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 0 G 68287 Mesorhizobium 0.00 1 1 S 2725666 Mesorhizobium terrae 0.00 1 0 F 45401 Hyphomicrobiaceae 0.00 1 1 G 81 Hyphomicrobium 0.00 1 0 F 772 Bartonellaceae 0.00 1 0 G 773 Bartonella 0.00 1 0 G1 2645622 unclassified Bartonella 0.00 1 1 S 1933904 Bartonella sp. WD16.2 0.04 73 0 O 204458 Caulobacterales 0.04 73 0 F 76892 Caulobacteraceae 0.04 72 1 G 41275 Brevundimonas 0.04 71 0 G1 2622653 unclassified Brevundimonas 0.04 71 71 S 2560058 Brevundimonas sp. Bb-A 0.00 1 0 G 20 Phenylobacterium 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.03 63 9 O 204455 Rhodobacterales 0.03 53 4 F 31989 Paracoccaceae 0.01 22 0 G 204456 Gemmobacter 0.01 22 22 S 2840474 Gemmobacter fulvus 0.01 16 14 G 265 Paracoccus 0.00 1 1 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 1 1 S 1529068 Paracoccus tegillarcae 0.00 4 0 G 2831955 Pikeienuella 0.00 4 4 S 2748098 Pikeienuella piscinae 0.00 2 0 G 2683599 Paroceanicella 0.00 2 2 S 2579971 Paroceanicella profunda 0.00 1 0 G 3029205 Abyssibius 0.00 1 1 S 2881234 Abyssibius alkaniclasticus 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 1 0 G 2778525 Profundibacter 0.00 1 1 S 2171755 Profundibacter amoris 0.00 1 0 G 1434002 Falsirhodobacter 0.00 1 1 S 2692330 Falsirhodobacter algicola 0.00 1 0 G 2816884 Qingshengfaniella 0.00 1 1 S 2599296 Qingshengfaniella alkalisoli 0.00 1 1 F 2854170 Roseobacteraceae 0.02 40 4 O 204457 Sphingomonadales 0.01 19 5 F 41297 Sphingomonadaceae 0.01 12 8 G 13687 Sphingomonas 0.00 2 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 745310 Sphingomonas sp. MM-1 0.00 1 1 S 2804617 Sphingomonas sp. LHG3406-1 0.00 1 1 S 2972485 Sphingomonas endolithica 0.00 1 1 S 2681549 Sphingomonas profundi 0.00 1 1 G 165696 Novosphingobium 0.00 1 0 G 1434046 Sphingorhabdus 0.00 1 1 S 1913578 Sphingorhabdus lutea 0.01 16 2 F 335929 Erythrobacteraceae 0.00 6 1 G 1855416 Qipengyuania 0.00 5 5 S 2782568 Qipengyuania soli 0.00 3 3 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 2 0 G 2800680 Alteriqipengyuania 0.00 2 2 S 3053610 Alteriqipengyuania flavescens 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 1 0 G 2800681 Aurantiacibacter 0.00 1 1 S 1648404 Aurantiacibacter atlanticus 0.00 1 0 G 2800686 Tsuneonella 0.00 1 0 G1 2800703 unclassified Tsuneonella 0.00 1 1 S 3042152 Tsuneonella sp. CC-YZS046 0.00 1 0 F 2820280 Sphingosinicellaceae 0.00 1 0 G 335405 Sphingosinicella 0.00 1 0 G1 2644549 unclassified Sphingosinicella 0.00 1 1 S 1892855 Sphingosinicella sp. BN140058 0.02 31 1 O 766 Rickettsiales 0.01 15 0 F 942 Anaplasmataceae 0.01 14 0 G 2883098 Candidatus Mesenet 0.01 14 14 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 G 768 Anaplasma 0.00 8 0 F 775 Rickettsiaceae 0.00 8 0 F1 33988 Rickettsieae 0.00 5 0 G 780 Rickettsia 0.00 4 1 G1 114277 spotted fever group 0.00 2 0 S 781 Rickettsia conorii 0.00 2 2 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 1 S 35790 Rickettsia japonica 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.00 2 0 G 2601645 Candidatus Sneabacter 0.00 2 2 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 7 0 F 2603433 Candidatus Deianiraeaceae 0.00 7 0 G 2603321 Candidatus Deianiraea 0.00 7 7 S 2163644 Candidatus Deianiraea vastatrix 0.00 6 1 O 1921002 Holosporales 0.00 5 0 F 44746 Holosporaceae 0.00 3 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 3 3 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 2 0 G 2601651 Candidatus Nesciobacter 0.00 2 2 S 2601668 Candidatus Nesciobacter abundans 0.00 3 0 C1 33807 unclassified Alphaproteobacteria 0.00 3 3 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.00 3 0 O 2800060 Hyphomonadales 0.00 3 0 F 69657 Hyphomonadaceae 0.00 3 2 G 85 Hyphomonas 0.00 1 0 G1 2630699 unclassified Hyphomonas 0.00 1 1 S 87 Hyphomonas sp. 0.00 3 0 O 2800059 Maricaulales 0.00 3 1 F 2800061 Maricaulaceae 0.00 2 0 G 74317 Maricaulis 0.00 2 2 S 74318 Maricaulis maris 0.00 2 2 O 362534 Kordiimonadales 0.00 2 0 O 2493627 Minwuiales 0.00 2 0 F 2493628 Minwuiaceae 0.00 2 0 G 2493629 Minwuia 0.00 2 2 G1 2618799 unclassified Minwuia 0.00 1 0 O 255473 Parvularculales 0.00 1 0 F 255474 Parvularculaceae 0.00 1 0 G 208215 Parvularcula 0.00 1 0 G1 2647080 unclassified Parvularcula 0.00 1 1 S 3067902 Parvularcula sp. IMCC14364 0.00 7 0 C 580370 Zetaproteobacteria 0.00 7 0 O 580371 Mariprofundales 0.00 7 0 F 580372 Mariprofundaceae 0.00 7 7 G 377315 Mariprofundus 0.00 3 0 C 1807140 Acidithiobacillia 0.00 3 0 O 225057 Acidithiobacillales 0.00 3 0 F 225058 Acidithiobacillaceae 0.00 3 3 G 119977 Acidithiobacillus 33.04 60309 1029 D1 1783272 Terrabacteria group 22.52 41103 369 P 1239 Bacillota 16.11 29412 220 C 91061 Bacilli 14.16 25858 156 O 186826 Lactobacillales 12.06 22007 8 F 1300 Streptococcaceae 12.04 21987 16806 G 1301 Streptococcus 0.59 1082 752 S 1308 Streptococcus thermophilus 0.16 283 283 S1 767463 Streptococcus thermophilus ND03 0.02 41 41 S1 322159 Streptococcus thermophilus LMD-9 0.00 6 6 S1 1435981 Streptococcus thermophilus 1F8CT 0.38 699 699 S 68892 Streptococcus infantis 0.34 615 425 S 1313 Streptococcus pneumoniae 0.08 140 140 S1 1159083 Streptococcus pneumoniae PCS8235 0.02 32 32 S1 869311 Streptococcus pneumoniae SPN032672 0.01 15 15 S1 516950 Streptococcus pneumoniae CGSP14 0.00 3 3 S1 525381 Streptococcus pneumoniae TCH8431/19A 0.28 504 460 S 1311 Streptococcus agalactiae 0.02 44 44 S1 1203670 Streptococcus agalactiae GD201008-001 0.24 433 424 S 1314 Streptococcus pyogenes 0.00 9 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 9 9 S2 160491 Streptococcus pyogenes str. Manfredo 0.15 278 278 S 2490633 Streptococcus periodonticum 0.10 190 32 G1 2608887 unclassified Streptococcus 0.03 51 51 S 3028082 Streptococcus sp. 29896 0.02 45 45 S 2664091 Streptococcus sp. zg-86 0.02 29 29 S 3231906 Streptococcus sp. ZY19097 0.01 24 24 S 2975324 Streptococcus sp. FSL R7-0248 0.00 9 9 S 3098075 Streptococcus sp. S1 0.09 164 164 S 1304 Streptococcus salivarius 0.07 134 134 S 1111760 Streptococcus troglodytae 0.07 128 128 S 1345 Streptococcus ferus 0.05 99 0 G1 671232 Streptococcus anginosus group 0.04 68 68 S 1328 Streptococcus anginosus 0.02 31 26 S 1338 Streptococcus intermedius 0.00 4 4 S1 862967 Streptococcus intermedius B196 0.00 1 1 S1 862966 Streptococcus intermedius C270 0.05 88 88 S 1326 Streptococcus acidominimus 0.05 86 86 S 1348 Streptococcus parauberis 0.05 83 83 S 1341 Streptococcus ratti 0.04 74 0 G1 119603 Streptococcus dysgalactiae group 0.02 40 39 S 1336 Streptococcus equi 0.00 1 1 S1 40041 Streptococcus equi subsp. zooepidemicus 0.02 34 4 S 1334 Streptococcus dysgalactiae 0.01 16 16 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.01 14 11 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 3 3 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.04 68 68 S 82348 Streptococcus pluranimalium 0.04 67 57 S 1307 Streptococcus suis 0.01 10 10 S1 1340847 Streptococcus suis T15 0.03 56 56 S 1310 Streptococcus sobrinus 0.03 46 46 S 28037 Streptococcus mitis 0.02 43 43 S 1811193 Streptococcus pantholopis 0.02 35 35 S 1305 Streptococcus sanguinis 0.02 31 31 S 1346 Streptococcus iniae 0.01 23 23 S 2173853 Streptococcus chenjunshii 0.01 23 23 S 102886 Streptococcus didelphis 0.01 19 19 S 1302 Streptococcus gordonii 0.01 16 16 S 2686210 Streptococcus ruminicola 0.01 15 15 S 59310 Streptococcus macedonicus 0.01 14 14 S 2021971 Streptococcus respiraculi 0.01 12 12 S 400065 Streptococcus merionis 0.01 12 2 S 1303 Streptococcus oralis 0.01 10 10 S1 1458253 Streptococcus oralis subsp. dentisani 0.01 12 12 S 1335 Streptococcus equinus 0.01 10 10 S 1309 Streptococcus mutans 0.00 8 8 S 33040 Streptococcus milleri 0.00 6 6 S 2781599 Streptococcus oriscaviae 0.00 5 5 S 1501662 Streptococcus parasuis 0.00 2 2 S 1814128 Streptococcus halotolerans 0.00 1 1 S 1825069 Streptococcus marmotae 0.01 10 3 G 1357 Lactococcus 0.00 5 5 S 1366 Lactococcus raffinolactis 0.00 1 0 S 1363 Lactococcus garvieae 0.00 1 1 S1 1890280 Lactococcus garvieae subsp. garvieae 0.00 1 1 S 1151742 Lactococcus taiwanensis 0.00 2 0 G 1930830 Floricoccus 0.00 2 2 S 1859475 Floricoccus penangensis 0.84 1530 0 F 81852 Enterococcaceae 0.83 1510 1 G 1350 Enterococcus 0.80 1453 1449 S 1351 Enterococcus faecalis 0.00 4 4 S1 1201292 Enterococcus faecalis ATCC 29212 0.02 32 31 S 1352 Enterococcus faecium 0.00 1 1 S1 1344042 Enterococcus faecium T110 0.01 16 15 S 1354 Enterococcus hirae 0.00 1 1 S1 768486 Enterococcus hirae ATCC 9790 0.00 4 4 S 1353 Enterococcus gallinarum 0.00 4 4 S 44008 Enterococcus cecorum 0.01 15 1 G 51668 Tetragenococcus 0.01 12 12 S 51669 Tetragenococcus halophilus 0.00 2 2 S 526944 Tetragenococcus osmophilus 0.00 4 0 G 33969 Melissococcus 0.00 4 4 S 33970 Melissococcus plutonius 0.00 1 1 G 2737 Vagococcus 0.83 1507 0 F 186828 Carnobacteriaceae 0.80 1453 0 G 117563 Granulicatella 0.48 882 882 S 46124 Granulicatella adiacens 0.31 571 571 S 137732 Granulicatella elegans 0.01 27 25 G 29393 Dolosigranulum 0.00 1 1 S 29394 Dolosigranulum pigrum 0.00 1 0 G1 2622049 unclassified Dolosigranulum 0.00 1 1 S 3110289 Dolosigranulum sp. MSK312 0.01 18 18 G 2747 Carnobacterium 0.00 5 0 G 82800 Desemzia 0.00 5 5 S 82801 Desemzia incerta 0.00 3 0 G 191769 Marinilactibacillus 0.00 3 0 G1 2632303 unclassified Marinilactibacillus 0.00 3 3 S 1911586 Marinilactibacillus sp. 15R 0.00 1 0 G 1470540 Jeotgalibaca 0.00 1 1 S 1868794 Jeotgalibaca arthritidis 0.32 589 88 F 33958 Lactobacillaceae 0.17 319 31 G 1578 Lactobacillus 0.11 202 1 G1 2620435 unclassified Lactobacillus 0.11 201 201 S 1545702 Lactobacillus sp. wkB8 0.03 62 58 S 1584 Lactobacillus delbrueckii 0.00 2 1 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 1 1 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 0 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 1 1 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.00 8 8 S 1587 Lactobacillus helveticus 0.00 4 2 S 1579 Lactobacillus acidophilus 0.00 2 2 S1 272621 Lactobacillus acidophilus NCFM 0.00 3 3 S 33959 Lactobacillus johnsonii 0.00 2 2 S 151781 Lactobacillus intestinalis 0.00 1 1 S 227945 Lactobacillus ultunensis 0.00 1 1 S 1218493 Lactobacillus kullabergensis 0.00 1 1 S 267818 Lactobacillus kefiranofaciens 0.00 1 1 S 147802 Lactobacillus iners 0.00 1 1 S 83683 Lactobacillus amylolyticus 0.00 1 1 S 47770 Lactobacillus crispatus 0.00 1 1 S 1596 Lactobacillus gasseri 0.02 41 19 G 2767887 Ligilactobacillus 0.00 8 8 S 1624 Ligilactobacillus salivarius 0.00 8 8 S 89059 Ligilactobacillus acidipiscis 0.00 3 3 S 1605 Ligilactobacillus animalis 0.00 2 2 S 1622 Ligilactobacillus murinus 0.00 1 1 S 1623 Ligilactobacillus ruminis 0.02 30 17 G 46255 Weissella 0.00 4 4 S 1631871 Weissella jogaejeotgali 0.00 3 3 S 137591 Weissella cibaria 0.00 3 3 S 759620 Weissella ceti 0.00 2 2 S 1249 Weissella paramesenteroides 0.00 1 1 S 155866 Weissella soli 0.01 25 2 G 2759736 Lacticaseibacillus 0.01 15 14 S 1597 Lacticaseibacillus paracasei 0.00 1 1 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.00 6 6 S 3025672 Lacticaseibacillus pabuli 0.00 2 2 S 47715 Lacticaseibacillus rhamnosus 0.01 14 0 G 2767886 Levilactobacillus 0.01 11 11 S 1580 Levilactobacillus brevis 0.00 2 2 S 267363 Levilactobacillus zymae 0.00 1 1 S 2292255 Levilactobacillus suantsaii 0.01 13 0 G 2742598 Limosilactobacillus 0.01 10 10 S 1598 Limosilactobacillus reuteri 0.00 2 2 S 97478 Limosilactobacillus mucosae 0.00 1 1 S 1613 Limosilactobacillus fermentum 0.01 10 0 G 2767842 Lactiplantibacillus 0.00 7 7 S 1590 Lactiplantibacillus plantarum 0.00 2 2 S 1589 Lactiplantibacillus pentosus 0.00 1 1 S 60520 Lactiplantibacillus paraplantarum 0.01 10 5 G 2767881 Fructilactobacillus 0.00 3 3 S 1625 Fructilactobacillus sanfranciscensis 0.00 2 2 S 1614 Fructilactobacillus fructivorans 0.00 9 9 G 2767889 Loigolactobacillus 0.00 7 4 G 2767893 Lentilactobacillus 0.00 3 3 S 1581 Lentilactobacillus buchneri 0.00 6 6 G 1243 Leuconostoc 0.00 3 1 G 2767877 Apilactobacillus 0.00 1 1 S 148814 Apilactobacillus kunkeei 0.00 1 1 S 2923364 Apilactobacillus apisilvae 0.00 3 0 G 2767882 Furfurilactobacillus 0.00 3 3 S 231049 Furfurilactobacillus rossiae 0.00 2 0 G 1253 Pediococcus 0.00 2 0 G1 1670797 Pediococcus acidilactici group 0.00 2 2 S 1254 Pediococcus acidilactici 0.00 2 0 G 2930384 Periweissella 0.00 2 2 S 2506420 Periweissella cryptocerci 0.00 2 2 G 2767878 Bombilactobacillus 0.00 1 1 G 2767888 Liquorilactobacillus 0.00 1 1 G 2767890 Paucilactobacillus 0.00 1 0 G 2767892 Secundilactobacillus 0.00 1 1 S 176292 Secundilactobacillus malefermentans 0.00 1 0 G 46254 Oenococcus 0.00 1 0 S 336988 Oenococcus kitaharae 0.00 1 1 S1 1045004 Oenococcus kitaharae DSM 17330 0.00 1 1 G 3118928 Xylocopilactobacillus 0.04 69 2 F 186827 Aerococcaceae 0.02 28 12 G 1375 Aerococcus 0.01 11 11 S 3078812 Aerococcus tenax 0.00 2 2 S 1376 Aerococcus urinae 0.00 2 2 S 87541 Aerococcus christensenii 0.00 1 1 S 128944 Aerococcus urinaehominis 0.01 21 0 G 46123 Abiotrophia 0.01 21 7 S 46125 Abiotrophia defectiva 0.01 14 14 S1 592010 Abiotrophia defectiva ATCC 49176 0.00 9 0 G 66831 Facklamia 0.00 9 9 S 178214 Facklamia hominis 0.00 5 0 G 2862144 Ruoffia 0.00 5 5 S 87458 Ruoffia tabacinasalis 0.00 3 0 G 89092 Ignavigranum 0.00 3 3 S 89093 Ignavigranum ruoffiae 0.00 1 1 G 13075 Globicatella 1.83 3334 159 O 1385 Bacillales 0.92 1673 49 F 186817 Bacillaceae 0.61 1106 86 G 1386 Bacillus 0.32 582 4 G1 653685 Bacillus subtilis group 0.28 511 2 G2 1938374 Bacillus amyloliquefaciens group 0.22 406 401 S 492670 Bacillus velezensis 0.00 5 5 S1 1385727 Bacillus velezensis NAU-B3 0.06 103 101 S 1390 Bacillus amyloliquefaciens 0.00 2 2 S1 1292358 Bacillus amyloliquefaciens KHG19 0.02 43 30 S 1423 Bacillus subtilis 0.00 7 7 S1 86029 Bacillus subtilis subsp. natto 0.00 6 3 S1 135461 Bacillus subtilis subsp. subtilis 0.00 2 2 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 1 1 S2 224308 Bacillus subtilis subsp. subtilis str. 168 0.01 11 11 S 483913 Bacillus inaquosorum 0.00 5 5 S 1648923 Bacillus paralicheniformis 0.00 3 3 S 1402 Bacillus licheniformis 0.00 3 0 G2 653388 Bacillus mojavensis subgroup 0.00 3 3 S 260554 Bacillus halotolerans 0.00 1 0 S 1452 Bacillus atrophaeus 0.00 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 1 1 S 96241 Bacillus spizizenii 0.19 348 13 G1 86661 Bacillus cereus group 0.07 121 100 S 1428 Bacillus thuringiensis 0.01 14 14 S1 180850 Bacillus thuringiensis serovar indiana 0.00 3 3 S1 412694 Bacillus thuringiensis str. Al Hakam 0.00 2 2 S1 1217737 Bacillus thuringiensis HD-789 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 0.00 1 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.00 1 1 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.06 107 44 S 1396 Bacillus cereus 0.02 41 41 S1 1454382 Bacillus cereus D17 0.01 17 17 S1 1003239 Bacillus cereus C1L 0.00 3 3 S1 572264 Bacillus cereus 03BB102 0.00 2 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 2 2 S2 637380 Bacillus cereus biovar anthracis str. CI 0.02 33 32 S 1392 Bacillus anthracis 0.00 1 1 S1 261591 Bacillus anthracis str. Vollum 0.02 32 0 G2 2750818 unclassified Bacillus cereus group 0.02 32 32 S 1892404 Bacillus sp. ABP14 0.01 26 26 S 2026191 Bacillus luti 0.00 5 5 S 2026186 Bacillus paranthracis 0.00 5 5 S 1405 Bacillus mycoides 0.00 2 2 S 64104 Bacillus pseudomycoides 0.00 1 1 S 580165 Bacillus cytotoxicus 0.00 1 1 S 1890302 Bacillus wiedmannii 0.00 1 1 S 155322 Bacillus toyonensis 0.00 1 1 S 2817477 Bacillus paramobilis 0.02 41 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.02 32 32 S 2874284 Bacillus sp. CRB-7 0.00 4 4 S 1806216 Bacillus sp. RZ2MS9 0.00 2 2 S 2841656 Bacillus sp. ZHX3 0.00 1 1 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2925318 Bacillus sp. N5-665 0.00 1 1 S 3129297 Bacillus sp. FJAT-52991 0.01 21 21 S 1408 Bacillus pumilus 0.01 21 0 G1 1792192 Bacillus altitudinis complex 0.01 21 21 S 293387 Bacillus altitudinis 0.00 7 7 S 561879 Bacillus safensis 0.16 284 0 G 84406 Virgibacillus 0.15 281 281 S 447199 Virgibacillus salarius 0.00 3 0 G1 2620237 unclassified Virgibacillus 0.00 3 3 S 403957 Virgibacillus sp. SK37 0.03 61 0 G 2837506 Niallia 0.03 61 0 G1 2837522 unclassified Niallia 0.03 61 61 S 3082444 Niallia sp. XMNu-256 0.02 30 5 G 400634 Lysinibacillus 0.01 11 11 S 2590012 Lysinibacillus agricola 0.00 8 0 G1 2636778 unclassified Lysinibacillus 0.00 8 8 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 3 3 S 28031 Lysinibacillus fusiformis 0.00 3 3 S 2086577 Lysinibacillus timonensis 0.01 26 1 G 45667 Halobacillus 0.01 25 25 S 45668 Halobacillus litoralis 0.01 25 0 G 2800373 Priestia 0.01 25 19 S 1404 Priestia megaterium 0.00 6 6 S1 1006007 Priestia megaterium WSH-002 0.01 19 3 G 2837504 Heyndrickxia 0.01 16 16 S 1398 Heyndrickxia coagulans 0.01 18 0 G 175304 Lentibacillus 0.01 13 13 S 1472767 Lentibacillus amyloliquefaciens 0.00 3 0 G1 2614679 unclassified Lentibacillus 0.00 3 3 S 2518176 Lentibacillus sp. CBA3610 0.00 2 2 S 2911514 Lentibacillus daqui 0.00 8 2 G 129337 Geobacillus 0.00 4 1 S 33940 Geobacillus thermodenitrificans 0.00 3 3 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 2 2 S 1921421 Geobacillus genomosp. 3 0.00 6 0 G 2675229 Peribacillus 0.00 3 3 S 264697 Peribacillus muralis 0.00 2 2 S 1407 Peribacillus psychrosaccharolyticus 0.00 1 1 S 450367 Peribacillus frigoritolerans 0.00 6 0 G 2675232 Neobacillus 0.00 3 3 S 1193713 Neobacillus mesonae 0.00 3 0 G1 2675272 unclassified Neobacillus 0.00 3 3 S 3070676 Neobacillus sp. PS2-9 0.00 4 0 G 150247 Anoxybacillus 0.00 3 3 G1 2639704 unclassified Anoxybacillus 0.00 1 1 S 294699 Anoxybacillus amylolyticus 0.00 4 0 G 2785518 Radiobacillus 0.00 4 4 S 2594883 Radiobacillus deserti 0.00 4 0 G 2005375 Alkalicoccus 0.00 4 4 S 1667239 Alkalicoccus halolimnae 0.00 4 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 4 0 S 86665 Halalkalibacterium halodurans 0.00 4 4 S1 272558 Halalkalibacterium halodurans C-125 0.00 3 0 G 2837485 Evansella 0.00 2 0 S 1413 Evansella cellulosilytica 0.00 2 2 S1 649639 Evansella cellulosilytica DSM 2522 0.00 1 0 G1 2837486 unclassified Evansella 0.00 1 1 S 2924033 Evansella sp. LMS18 0.00 3 0 G 2837510 Siminovitchia 0.00 3 3 S 254758 Siminovitchia fortis 0.00 3 1 G 2685905 Salicibibacter 0.00 2 2 S 2743001 Salicibibacter cibi 0.00 2 1 G 459532 Terribacillus 0.00 1 1 S 361277 Terribacillus saccharophilus 0.00 1 1 G 1221880 Psychrobacillus 0.00 1 0 G 2675231 Mesobacillus 0.00 1 1 S 285983 Mesobacillus subterraneus 0.00 1 0 G 482460 Sediminibacillus 0.00 1 1 S 2729421 Sediminibacillus dalangtanensis 0.00 1 0 G 1400133 Allobacillus 0.00 1 1 S 570278 Allobacillus halotolerans 0.00 1 0 G 2675230 Cytobacillus 0.00 1 1 S 1399 Cytobacillus firmus 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 0 G 2804231 Lederbergia 0.00 1 1 S 1467 Lederbergia lenta 0.36 653 0 F 539738 Gemellaceae 0.36 653 370 G 1378 Gemella 0.11 208 208 S 29391 Gemella morbillorum 0.02 44 44 S 84135 Gemella sanguinis 0.02 31 27 G1 2624949 unclassified Gemella 0.00 4 4 S 2840371 Gemella sp. zg-570 0.34 619 5 F 90964 Staphylococcaceae 0.33 602 68 G 1279 Staphylococcus 0.19 352 331 S 1280 Staphylococcus aureus 0.01 20 20 S1 1229492 Staphylococcus aureus 08BA02176 0.00 1 1 S1 985006 Staphylococcus aureus subsp. aureus LGA251 0.03 63 62 S 1282 Staphylococcus epidermidis 0.00 1 1 S1 176280 Staphylococcus epidermidis ATCC 12228 0.02 30 30 S 70255 Staphylococcus condimenti 0.01 26 26 S 28035 Staphylococcus lugdunensis 0.01 21 21 S 1283 Staphylococcus haemolyticus 0.01 15 15 S 2044912 Staphylococcus debuckii 0.00 9 9 S 1286 Staphylococcus simulans 0.00 4 1 S 29388 Staphylococcus capitis 0.00 3 3 S1 74703 Staphylococcus capitis subsp. urealyticus 0.00 2 2 S 3051183 Staphylococcus hsinchuensis 0.00 2 1 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2989772 Staphylococcus sp. IVB6246 0.00 2 2 S 1290 Staphylococcus hominis 0.00 2 0 G1 2815305 Staphylococcus intermedius group 0.00 2 2 S 283734 Staphylococcus pseudintermedius 0.00 2 2 S 985002 Staphylococcus argenteus 0.00 1 1 S 170573 Staphylococcus pettenkoferi 0.00 1 1 S 29382 Staphylococcus cohnii 0.00 1 1 S 29380 Staphylococcus caprae 0.00 1 1 S 29378 Staphylococcus arlettae 0.01 10 4 G 2803850 Mammaliicoccus 0.00 6 6 S 1296 Mammaliicoccus sciuri 0.00 2 0 G 45669 Salinicoccus 0.00 2 2 S 407035 Salinicoccus halodurans 0.05 92 4 F 186822 Paenibacillaceae 0.04 64 4 G 44249 Paenibacillus 0.01 26 0 G1 185978 unclassified Paenibacillus 0.01 10 10 S 715179 Paenibacillus sp. sptzw28 0.00 6 6 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 4 4 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 3 3 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 2211212 Paenibacillus sp. DCT19 0.00 1 1 S 3032287 Paenibacillus sp. BR1-192 0.01 16 14 S 1406 Paenibacillus polymyxa 0.00 2 2 S1 886882 Paenibacillus polymyxa SC2 0.00 6 6 S 79263 Paenibacillus chitinolyticus 0.00 3 3 S 2509456 Paenibacillus protaetiae 0.00 3 3 S 130049 Paenibacillus dendritiformis 0.00 2 2 S 2909671 Paenibacillus spongiae 0.00 1 1 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 1333845 Paenibacillus sophorae 0.00 1 1 S 528191 Paenibacillus xylanexedens 0.00 1 0 S 1464 Paenibacillus larvae 0.00 1 1 S1 1477 Paenibacillus larvae subsp. pulvifaciens 0.01 21 0 F1 85151 Aneurinibacillus group 0.01 21 19 G 55079 Aneurinibacillus 0.00 2 2 S 1500254 Aneurinibacillus soli 0.00 2 1 G 329857 Cohnella 0.00 1 1 S 2507935 Cohnella abietis 0.00 1 0 G 55080 Brevibacillus 0.00 1 1 S 1393 Brevibacillus brevis 0.03 56 20 F 186818 Planococcaceae 0.01 14 12 G 1569 Sporosarcina 0.00 2 0 G1 2647733 unclassified Sporosarcina 0.00 1 1 S 1930546 Sporosarcina sp. P37 0.00 1 1 S 2810514 Sporosarcina sp. Marseille-Q4063 0.01 12 0 G 651660 Paenisporosarcina 0.01 11 11 S 2320858 Paenisporosarcina cavernae 0.00 1 1 S 417367 Paenisporosarcina antarctica 0.00 5 5 G 1372 Planococcus 0.00 5 0 G 160795 Ureibacillus 0.00 5 5 S 367743 Ureibacillus thermophilus 0.02 30 0 F 186820 Listeriaceae 0.01 25 5 G 1637 Listeria 0.01 11 0 G1 2642072 unclassified Listeria 0.01 11 11 S 1844999 Listeria sp. PSOL-1 0.00 5 0 S 1638 Listeria ivanovii 0.00 5 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.00 5 5 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 4 4 S 1639 Listeria monocytogenes 0.00 5 0 G 2755 Brochothrix 0.00 5 5 S 2756 Brochothrix thermosphacta 0.01 22 14 F 186824 Thermoactinomycetaceae 0.00 2 0 G 292635 Laceyella 0.00 2 2 S 37482 Laceyella sacchari 0.00 2 2 G 1274351 Kroppenstedtia 0.00 2 0 G 1348505 Polycladomyces 0.00 2 2 S 1125966 Polycladomyces abyssicola 0.00 2 0 G 1677050 Novibacillus 0.00 2 2 S 1471761 Novibacillus thermophilus 0.01 12 0 F 186823 Alicyclobacillaceae 0.00 8 1 G 29330 Alicyclobacillus 0.00 6 6 S 2931921 Alicyclobacillus mengziensis 0.00 1 0 G1 2622400 unclassified Alicyclobacillus 0.00 1 1 S 2665646 Alicyclobacillus sp. SO9 0.00 2 0 G 432330 Tumebacillus 0.00 2 2 S 1903704 Tumebacillus avium 0.00 2 1 G 1129704 Kyrpidia 0.00 1 1 S 2055160 Kyrpidia spormannii 0.01 10 0 F 186821 Sporolactobacillaceae 0.00 6 3 G 2077 Sporolactobacillus 0.00 3 3 S 269673 Sporolactobacillus terrae 0.00 4 0 G 475230 Pullulanibacillus 0.00 4 0 G1 2640606 unclassified Pullulanibacillus 0.00 4 4 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 8 0 O1 539002 Bacillales incertae sedis 0.00 8 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 8 3 G 33986 Exiguobacterium 0.00 5 5 S 1428684 Exiguobacterium alkaliphilum 4.85 8862 1 C 909932 Negativicutes 2.68 4889 0 O 1843489 Veillonellales 2.68 4889 9 F 31977 Veillonellaceae 2.64 4818 1293 G 29465 Veillonella 1.63 2980 2980 S 29466 Veillonella parvula 0.24 436 436 S 423477 Veillonella rogosae 0.05 90 90 S 39777 Veillonella atypica 0.01 19 19 S 248315 Veillonella rodentium 0.02 39 3 G 906 Megasphaera 0.01 26 26 S 2144175 Megasphaera stantonii 0.00 6 6 S 1675036 Megasphaera hexanoica 0.00 4 3 S 907 Megasphaera elsdenii 0.00 1 1 S1 1064535 Megasphaera elsdenii DSM 20460 0.01 23 6 G 39948 Dialister 0.01 13 13 S 487173 Dialister succinatiphilus 0.00 4 4 S 39950 Dialister pneumosintes 2.17 3969 0 O 909929 Selenomonadales 2.17 3957 7 F 1843491 Selenomonadaceae 2.16 3945 1271 G 970 Selenomonas 0.94 1724 303 G1 2637378 unclassified Selenomonas 0.45 826 826 S 713030 Selenomonas sp. oral taxon 136 0.25 449 449 S 1884263 Selenomonas sp. oral taxon 920 0.05 98 98 S 712528 Selenomonas sp. oral taxon 126 0.02 34 34 S 712538 Selenomonas sp. oral taxon 478 0.01 14 14 S 3095337 Selenomonas sp. TAMA-11512 0.48 882 882 S 69823 Selenomonas sputigena 0.02 34 34 S 2754044 Selenomonas timonae 0.02 28 28 S 135079 Selenomonas dianae 0.00 6 0 S 971 Selenomonas ruminantium 0.00 6 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.00 6 6 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.00 4 3 G 158846 Megamonas 0.00 1 1 S 437897 Megamonas funiformis 0.00 1 0 G 864 Pectinatus 0.00 1 1 S 865 Pectinatus frisingensis 0.01 12 0 F 1843490 Sporomusaceae 0.01 10 0 G 81463 Anaeromusa 0.01 10 0 G1 673272 environmental samples 0.01 10 10 S 673273 uncultured Anaeromusa sp. 0.00 2 0 G 2375 Sporomusa 0.00 2 2 S 2377 Sporomusa termitida 0.00 3 0 O 1843488 Acidaminococcales 0.00 3 2 F 909930 Acidaminococcaceae 0.00 1 1 G 33024 Phascolarctobacterium 1.25 2282 35 C 186801 Clostridia 0.90 1646 1 O 3085636 Lachnospirales 0.75 1377 119 F 186803 Lachnospiraceae 0.58 1066 788 G 1164882 Lachnoanaerobaculum 0.14 263 263 S 2490855 Lachnoanaerobaculum gingivalis 0.01 15 15 S 617123 Lachnoanaerobaculum umeaense 0.05 100 0 G 1213720 Stomatobaculum 0.05 100 0 G1 2643635 unclassified Stomatobaculum 0.05 100 100 S 3059030 Stomatobaculum sp. F0698 0.02 38 0 G 2569097 Anaerobutyricum 0.02 38 38 S 39488 Anaerobutyricum hallii 0.01 10 9 G 1843210 Anaerocolumna 0.00 1 0 G1 2642604 unclassified Anaerocolumna 0.00 1 1 S 3070997 Anaerocolumna sp. MB42-C2 0.00 6 0 G 572511 Blautia 0.00 3 0 G1 2648079 unclassified Blautia 0.00 2 2 S 2860051 Blautia sp. KLE_1732_HM_1032 0.00 1 1 S 2479767 Blautia sp. SC05B48 0.00 2 0 S 53443 Blautia hydrogenotrophica 0.00 2 2 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 0 S 40520 Blautia obeum 0.00 1 1 S1 657314 Blautia obeum A2-162 0.00 6 0 G 2719231 Lacrimispora 0.00 6 6 S 384636 Lacrimispora xylanisolvens 0.00 6 2 G 830 Butyrivibrio 0.00 2 0 S 43305 Butyrivibrio proteoclasticus 0.00 2 2 S1 515622 Butyrivibrio proteoclasticus B316 0.00 2 2 S 185008 Butyrivibrio hungatei 0.00 4 0 G 2316020 Mediterraneibacter 0.00 4 4 S 33038 Mediterraneibacter gnavus 0.00 3 0 G 1506553 Lachnoclostridium 0.00 3 0 S 66219 Lachnoclostridium phytofermentans 0.00 3 3 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 3 0 G 28050 Lachnospira 0.00 3 3 S 39485 Lachnospira eligens 0.00 3 0 G 2163168 Kineothrix 0.00 3 0 G1 2625420 unclassified Kineothrix 0.00 3 3 S 3070215 Kineothrix sp. MB12-C1 0.00 2 0 G 189330 Dorea 0.00 2 2 S 88431 Dorea longicatena 0.00 2 0 G 2719313 Enterocloster 0.00 1 1 S 1531 Enterocloster clostridioformis 0.00 1 0 S 333367 Enterocloster asparagiformis 0.00 1 1 S1 518636 [Clostridium] asparagiforme DSM 15981 0.00 2 0 G 248744 Marvinbryantia 0.00 2 0 S 168384 Marvinbryantia formatexigens 0.00 2 2 S1 478749 Marvinbryantia formatexigens DSM 14469 0.00 2 0 G 33042 Coprococcus 0.00 2 2 S 116085 Coprococcus catus 0.00 2 0 G 2383 Candidatus Epulonipiscium 0.00 2 2 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 G 841 Roseburia 0.00 1 1 S 166486 Roseburia intestinalis 0.00 1 0 G 3088373 Chakrabartyella 0.00 1 1 S 2918914 Chakrabartyella piscis 0.00 1 0 G 207244 Anaerostipes 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.14 261 0 F 2603322 Vallitaleaceae 0.14 261 0 G 2603323 Petrocella 0.14 261 261 S 2173034 Petrocella atlantisensis 0.00 7 0 F 3018741 Cellulosilyticaceae 0.00 7 6 G 698776 Cellulosilyticum 0.00 1 0 S 29360 Cellulosilyticum lentocellum 0.00 1 1 S1 642492 Cellulosilyticum lentocellum DSM 5427 0.15 270 37 O 186802 Eubacteriales 0.04 72 4 F 31979 Clostridiaceae 0.04 64 4 G 1485 Clostridium 0.02 33 33 S 1502 Clostridium perfringens 0.00 6 4 S 1491 Clostridium botulinum 0.00 2 2 S1 1408283 Clostridium botulinum CDC_1436 0.00 6 6 S 1492 Clostridium butyricum 0.00 2 2 S 36845 Clostridium intestinale 0.00 2 1 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.00 2 2 S 1520 Clostridium beijerinckii 0.00 2 2 S 1534 Clostridium kluyveri 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 2320868 Clostridium manihotivorum 0.00 1 1 S 2068654 Clostridium fermenticellae 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 1 S 1216932 Clostridium bornimense 0.00 1 1 S 36839 Clostridium felsineum 0.00 1 1 S 29341 Clostridium argentinense 0.00 3 0 G 44258 Caloramator 0.00 3 1 G1 2629145 unclassified Caloramator 0.00 2 2 S 2576307 Caloramator sp. E03 0.00 1 0 G 49082 Candidatus Arthromitus 0.00 1 1 G1 2638829 unclassified Candidatus Arthromitus 0.03 52 46 F 31984 Heliobacteriaceae 0.00 6 0 G 79598 Heliorestis 0.00 6 6 S 356322 Heliorestis convoluta 0.02 38 0 O1 538999 Eubacteriales incertae sedis 0.01 20 4 G 1686313 Fenollaria 0.01 16 16 S 938288 Fenollaria massiliensis 0.01 13 0 G 1392389 Intestinimonas 0.01 13 13 S 1297617 Intestinimonas butyriciproducens 0.00 2 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 2 2 G 73918 Thermaerobacter 0.00 2 0 F 543347 Clostridiales Family XVI. Incertae Sedis 0.00 2 0 G 178898 Carboxydocella 0.00 2 2 S 178899 Carboxydocella thermautotrophica 0.00 1 0 G 1918454 Flintibacter 0.00 1 0 G1 2610894 unclassified Flintibacter 0.00 1 1 S 2610895 Flintibacter sp. KGMB00164 0.02 32 3 F 216572 Oscillospiraceae 0.01 12 0 G 1263 Ruminococcus 0.00 7 7 G1 2608920 unclassified Ruminococcus 0.00 4 4 S 2564099 Ruminococcus bovis 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.00 4 0 G 459786 Oscillibacter 0.00 4 4 S 2763056 Oscillibacter hominis 0.00 3 0 G 35829 Acetivibrio 0.00 2 2 S 1677857 Acetivibrio saccincola 0.00 1 1 S 1515 Acetivibrio thermocellus 0.00 3 0 G 216851 Faecalibacterium 0.00 2 2 S 853 Faecalibacterium prausnitzii 0.00 1 1 S 3030638 Faecalibacterium taiwanense 0.00 2 0 G 3048127 Thermocaproicibacter 0.00 2 2 S 2966552 Thermocaproicibacter melissae 0.00 2 0 G 2842531 Solibaculum 0.00 2 2 S 2780922 Solibaculum mannosilyticum 0.00 1 0 G 236752 Fastidiosipila 0.00 1 1 S 236753 Fastidiosipila sanguinis 0.00 1 1 G 292632 Subdoligranulum 0.00 1 0 G 2304691 Thermoclostridium 0.00 1 1 S 1510 Thermoclostridium stercorarium 0.00 8 0 F 2937910 Desulfotomaculaceae 0.00 8 0 G 1562 Desulfotomaculum 0.00 8 0 S 1565 Desulfotomaculum nigrificans 0.00 8 8 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 6 0 F 186806 Eubacteriaceae 0.00 4 0 G 1730 Eubacterium 0.00 3 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 3 3 S 2841528 Eubacterium sp. MSJ-33 0.00 1 1 S 1736 Eubacterium limosum 0.00 2 0 G 274470 Alkalibacter 0.00 2 2 S 2815577 Alkalibacter rhizosphaerae 0.00 5 0 F 543349 Symbiobacteriaceae 0.00 5 0 G 2733 Symbiobacterium 0.00 5 0 S 2734 Symbiobacterium thermophilum 0.00 5 5 S1 292459 Symbiobacterium thermophilum IAM 14863 0.00 4 0 F 3047432 Maliibacteriaceae 0.00 4 0 G 3047433 Maliibacterium 0.00 4 4 S 2086585 Maliibacterium massiliense 0.00 3 0 F 3085642 Butyricicoccaceae 0.00 3 0 G 2048137 Agathobaculum 0.00 3 0 G1 2620324 unclassified Agathobaculum 0.00 3 3 S 3079302 Agathobaculum sp. NTUH-O15-33 0.00 3 0 F 2867375 Desulfallaceae 0.00 3 2 G 2867376 Desulfoscipio 0.00 1 0 S 102134 Desulfoscipio gibsoniae 0.00 1 1 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 3 1 F 1491775 Proteinivoraceae 0.00 2 0 G 2838170 Alkalicella 0.00 2 2 S 2731377 Alkalicella caledoniensis 0.00 3 0 F 186807 Peptococcaceae 0.00 2 0 G 51514 Dehalobacterium 0.00 2 2 S 51515 Dehalobacterium formicoaceticum 0.00 1 1 G 2916693 Desulforamulus 0.00 2 0 F 3046368 Aristaeellaceae 0.00 2 2 G 3046369 Aristaeella 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 0 G 56112 Dehalobacter 0.00 1 1 S 55583 Dehalobacter restrictus 0.00 1 0 F 68298 Syntrophomonadaceae 0.00 1 0 G 862 Syntrophomonas 0.00 1 0 S 863 Syntrophomonas wolfei 0.00 1 0 S1 370885 Syntrophomonas wolfei subsp. wolfei 0.00 1 1 S2 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 0.15 269 0 O 53433 Halanaerobiales 0.15 266 0 F 53434 Halobacteroidaceae 0.14 263 0 G 42417 Halobacteroides 0.14 263 0 S 42422 Halobacteroides halobius 0.14 263 263 S1 748449 Halobacteroides halobius DSM 5150 0.00 3 0 G 28186 Acetohalobium 0.00 3 0 S 28187 Acetohalobium arabaticum 0.00 3 3 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 1 0 F 972 Halanaerobiaceae 0.00 1 1 G 2330 Halanaerobium 0.00 1 0 O1 387655 Halanaerobiales incertae sedis 0.00 1 0 G 1769008 Anoxybacter 0.00 1 1 S 1323375 Anoxybacter fermentans 0.00 1 0 F 3046412 Halothermotrichaceae 0.00 1 0 G 32636 Halothermothrix 0.00 1 0 S 31909 Halothermothrix orenii 0.00 1 1 S1 373903 Halothermothrix orenii H 168 0.03 50 0 O 3082720 Peptostreptococcales 0.02 31 8 F 186804 Peptostreptococcaceae 0.01 12 0 G 1257 Peptostreptococcus 0.01 12 12 S 3003601 Peptostreptococcus equinus 0.00 6 0 G 1870884 Clostridioides 0.00 6 5 S 1496 Clostridioides difficile 0.00 1 1 S1 479832 Clostridioides difficile QCD-76w55 0.00 5 0 G 1505657 Intestinibacter 0.00 5 5 S 261299 Intestinibacter bartlettii 0.00 9 0 F 3030910 Anaerovoracaceae 0.00 5 5 G 86331 Mogibacterium 0.00 3 0 G 2060094 Aminipila 0.00 3 3 S 2697030 Aminipila terrae 0.00 1 1 G 1926556 Emergencia 0.00 9 0 F 3118655 Filifactoraceae 0.00 9 0 G 44259 Filifactor 0.00 9 0 S 143361 Filifactor alocis 0.00 9 9 S1 546269 Filifactor alocis ATCC 35896 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.00 9 0 O 68295 Thermoanaerobacterales 0.00 8 0 F 186814 Thermoanaerobacteraceae 0.00 8 0 G 3051499 Aceticella 0.00 8 8 S 2755338 Aceticella autotrophica 0.00 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 1 0 G 252965 Mahella 0.00 1 0 S 252966 Mahella australiensis 0.00 1 1 S1 697281 Mahella australiensis 50-1 BON 0.00 2 0 O 3039167 Moorellales 0.00 1 0 F 3039168 Moorellaceae 0.00 1 0 G 202949 Thermanaeromonas 0.00 1 0 S 161154 Thermanaeromonas toyohensis 0.00 1 1 S1 698762 Thermanaeromonas toyohensis ToBE 0.00 1 0 F 3039170 Desulfitibacteraceae 0.00 1 0 G 3234175 Metallumcola 0.00 1 1 S 3039180 Metallumcola ferriviriculae 0.00 1 0 C1 189325 Clostridia incertae sedis 0.00 1 0 G 3136917 Helicovermis 0.00 1 1 S 3065157 Helicovermis profundi 0.08 149 0 C 1737404 Tissierellia 0.08 142 2 O 1737405 Tissierellales 0.07 136 2 F 1570339 Peptoniphilaceae 0.05 93 14 G 165779 Anaerococcus 0.02 45 0 S 33034 Anaerococcus prevotii 0.02 45 45 S1 525919 Anaerococcus prevotii DSM 20548 0.01 20 0 G1 2614126 unclassified Anaerococcus 0.01 20 20 S 3036300 Anaerococcus sp. Marseille-Q7828 0.01 12 12 S 1755241 Anaerococcus nagyae 0.00 2 2 S 1870984 Anaerococcus mediterraneensis 0.01 23 1 G 162289 Peptoniphilus 0.01 11 11 S 54005 Peptoniphilus harei 0.01 10 10 S 3036303 Peptoniphilus genitalis 0.00 1 1 S 54006 Peptoniphilus ivorii 0.01 13 0 G 150022 Finegoldia 0.01 13 13 S 1260 Finegoldia magna 0.00 3 0 G 543311 Parvimonas 0.00 3 3 S 33033 Parvimonas micra 0.00 2 0 G 1161127 Murdochiella 0.00 2 2 S 1852373 Murdochiella vaginalis 0.00 3 0 F 2992719 Tepidimicrobiaceae 0.00 3 0 G 2794837 Schnuerera 0.00 3 0 S 45497 Schnuerera ultunensis 0.00 3 3 S1 1288971 [Clostridium] ultunense Esp 0.00 1 0 F 2992717 Acidilutibacteraceae 0.00 1 0 G 2992720 Acidilutibacter 0.00 1 1 S 2507161 Acidilutibacter cellobiosedens 0.00 7 0 C1 1737407 Tissierellia incertae sedis 0.00 7 0 G 1582879 Ezakiella 0.00 7 7 S 46507 Ezakiella coagulans 0.01 25 0 C 526524 Erysipelotrichia 0.01 25 0 O 526525 Erysipelotrichales 0.01 23 0 F 128827 Erysipelotrichaceae 0.00 6 0 G 3059504 Allocoprobacillus 0.00 6 6 S 2944914 Allocoprobacillus halotolerans 0.00 4 0 G 1647 Erysipelothrix 0.00 4 4 S 1648 Erysipelothrix rhusiopathiae 0.00 4 0 G 123375 Solobacterium 0.00 4 4 S 102148 Solobacterium moorei 0.00 3 0 G 1729679 Faecalibaculum 0.00 3 3 S 1702221 Faecalibaculum rodentium 0.00 3 0 G 2749267 Amedibacterium 0.00 3 3 S 2583452 Amedibacterium intestinale 0.00 2 0 G 1918536 Longicatena 0.00 2 2 S 1796635 Longicatena caecimuris 0.00 1 0 G 2679910 Intestinibaculum 0.00 1 1 S 2487118 Intestinibaculum porci 0.00 2 0 F 2810280 Coprobacillaceae 0.00 2 0 G 135858 Catenibacterium 0.00 2 0 G1 2643636 unclassified Catenibacterium 0.00 2 2 S 2478954 Catenibacterium sp. co_0103 0.00 3 0 C 3086086 Dethiobacteria 0.00 3 0 O 3086087 Dethiobacterales 0.00 3 0 F 3086088 Dethiobacteraceae 0.00 3 0 G 338648 Candidatus Contubernalis 0.00 3 3 S 338645 Candidatus Contubernalis alkalaceticus 0.00 1 0 P1 2840488 Bacillota incertae sedis 0.00 1 0 O 3071001 Caldicellulosiruptorales 0.00 1 0 F 3071002 Caldicellulosiruptoraceae 0.00 1 1 G 44000 Caldicellulosiruptor 9.33 17035 10 P 201174 Actinomycetota 9.28 16943 137 C 1760 Actinomycetes 3.74 6835 40 O 85006 Micrococcales 3.65 6656 10 F 1268 Micrococcaceae 3.57 6519 749 G 32207 Rothia 2.29 4179 4179 S 2047 Rothia dentocariosa 0.81 1475 1475 S 172042 Rothia aeria 0.05 96 88 S 43675 Rothia mucilaginosa 0.00 8 8 S1 680646 Rothia mucilaginosa DY-18 0.01 15 15 S 169480 Rothia amarae 0.00 5 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 5 5 S 2810516 Rothia sp. ZJ932 0.02 45 0 G 1742989 Glutamicibacter 0.02 28 28 S 37929 Glutamicibacter nicotianae 0.01 17 0 G1 2627139 unclassified Glutamicibacter 0.01 17 17 S 1155384 Glutamicibacter sp. ZJUTW 0.01 27 27 G 1269 Micrococcus 0.01 20 0 G 1742993 Pseudarthrobacter 0.01 20 0 G1 2647000 unclassified Pseudarthrobacter 0.01 20 20 S 2973976 Pseudarthrobacter sp. NS4 0.01 17 17 G 1160973 Auritidibacter 0.00 6 5 G 57493 Kocuria 0.00 1 1 S 71999 Kocuria palustris 0.00 4 0 G 1663 Arthrobacter 0.00 4 0 G1 235627 unclassified Arthrobacter 0.00 2 2 S 2991715 Arthrobacter sp. ATA002 0.00 1 1 S 2996261 Arthrobacter sp. MMS18-M83 0.00 1 1 S 2861279 Arthrobacter sp. PAMC25284 0.00 4 4 G 57494 Nesterenkonia 0.00 2 0 G 169133 Citricoccus 0.00 2 0 G1 2632435 unclassified Citricoccus 0.00 2 2 S 2567881 Citricoccus sp. SGAir0253 0.00 2 0 G 1742992 Paenarthrobacter 0.00 1 1 S 37931 Paenarthrobacter ureafaciens 0.00 1 0 G1 2634190 unclassified Paenarthrobacter 0.00 1 1 S 3049085 Paenarthrobacter sp. R1 0.03 63 0 F 2805591 Tropherymataceae 0.03 63 0 G 2038 Tropheryma 0.03 63 63 S 2039 Tropheryma whipplei 0.01 24 6 F 85023 Microbacteriaceae 0.01 10 0 F1 1655488 Luna cluster 0.01 10 6 F2 1655489 Luna-1 subcluster 0.00 3 1 G 529883 Rhodoluna 0.00 2 2 S 535712 Candidatus Rhodoluna planktonica 0.00 1 0 G 529881 Aquiluna 0.00 1 0 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 3 0 G 1573 Clavibacter 0.00 3 3 S 31963 Clavibacter nebraskensis 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2862880 Curtobacterium sp. TC1 0.00 1 1 G 33877 Agromyces 0.00 1 0 G 33882 Microbacterium 0.00 1 0 G1 2609290 unclassified Microbacterium 0.00 1 1 S 2981139 Microbacterium sp. AB 0.00 1 1 G 33886 Rathayibacter 0.00 1 1 G 55968 Leucobacter 0.01 23 0 F 85020 Dermabacteraceae 0.01 14 3 G 43668 Brachybacterium 0.01 11 10 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 2996004 Brachybacterium sp. NBEC-018 0.00 9 2 G 36739 Dermabacter 0.00 7 7 S 1667168 Dermabacter jinjuensis 0.01 12 0 F 85016 Cellulomonadaceae 0.01 12 5 G 1707 Cellulomonas 0.00 7 0 G1 2620175 unclassified Cellulomonas 0.00 6 6 S 2591145 Cellulomonas sp. Y8 0.00 1 1 S 2962632 Cellulomonas sp. NTE-D12 0.01 10 0 F 85019 Brevibacteriaceae 0.00 9 4 G 1696 Brevibacterium 0.00 5 0 G1 2614124 unclassified Brevibacterium 0.00 4 4 S 2575923 Brevibacterium sp. CS2 0.00 1 1 S 2999062 Brevibacterium sp. BRM-1 0.00 1 0 G 3162691 Saxibacter 0.00 1 1 S 2909229 Saxibacter everestensis 0.00 3 0 F 85021 Intrasporangiaceae 0.00 3 0 G 267408 Arsenicicoccus 0.00 3 0 G1 2663846 unclassified Arsenicicoccus 0.00 3 3 S 1658671 Arsenicicoccus sp. oral taxon 190 0.00 2 0 F 2805590 Ornithinimicrobiaceae 0.00 1 0 G 125287 Ornithinimicrobium 0.00 1 0 G1 2615080 unclassified Ornithinimicrobium 0.00 1 1 S 2908651 Ornithinimicrobium sp. INDO-MA30-4 0.00 1 0 G 265976 Serinicoccus 0.00 1 0 S 247333 Serinicoccus marinus 0.00 1 1 S1 1123251 Serinicoccus marinus DSM 15273 0.00 1 0 F 1042322 Demequinaceae 0.00 1 0 G 577469 Demequina 0.00 1 0 G1 2620311 unclassified Demequina 0.00 1 1 S 2881056 Demequina sp. TMPB413 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 1 S 2509457 Xylanimonas protaetiae 3.13 5711 14 O 85007 Mycobacteriales 3.07 5613 0 F 1653 Corynebacteriaceae 3.07 5613 214 G 1716 Corynebacterium 2.25 4110 4110 S 43768 Corynebacterium matruchotii 0.63 1143 1143 S 61592 Corynebacterium durum 0.01 26 26 S 679663 Corynebacterium canis 0.01 16 0 S 1718 Corynebacterium glutamicum 0.01 16 16 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.01 13 13 S 38284 Corynebacterium accolens 0.00 9 9 S 598660 Corynebacterium pyruviciproducens 0.00 9 9 S 38289 Corynebacterium jeikeium 0.00 8 8 S 43765 Corynebacterium amycolatum 0.00 8 8 S 35757 Corynebacterium cystitidis 0.00 6 6 S 2080740 Corynebacterium yudongzhengii 0.00 6 6 S 1414719 Corynebacterium jeddahense 0.00 6 6 S 108486 Corynebacterium falsenii 0.00 5 0 G1 2624378 unclassified Corynebacterium 0.00 3 3 S 1487956 Corynebacterium sp. ATCC 6931 0.00 2 2 S 2599641 Corynebacterium sp. sy039 0.00 5 0 S 234828 Corynebacterium caspium 0.00 5 5 S1 1121355 Corynebacterium caspium DSM 44850 0.00 3 3 S 1758466 Corynebacterium faecale 0.00 3 3 S 161895 Corynebacterium phocae 0.00 3 3 S 187491 Corynebacterium glaucum 0.00 2 2 S 2804917 Corynebacterium pseudokroppenstedtii 0.00 2 0 S 441501 Corynebacterium massiliense 0.00 2 2 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 2 2 S 2675219 Corynebacterium occultum 0.00 2 2 S 53374 Corynebacterium coyleae 0.00 2 2 S 1190508 Corynebacterium aquatimens 0.00 1 1 S 43771 Corynebacterium urealyticum 0.00 1 1 S 1783348 Corynebacterium guangdongense 0.00 1 1 S 161896 Corynebacterium camporealensis 0.00 1 1 S 2055947 Corynebacterium heidelbergense 0.00 1 1 S 3049799 Corynebacterium breve 0.00 1 1 S 1719 Corynebacterium pseudotuberculosis 0.00 1 1 S 1717 Corynebacterium diphtheriae 0.00 1 0 S 575200 Corynebacterium maris 0.00 1 1 S1 1224163 Corynebacterium maris DSM 45190 0.00 1 1 S 571915 Corynebacterium mustelae 0.00 1 1 S 38304 Corynebacterium tuberculostearicum 0.03 49 0 F 1762 Mycobacteriaceae 0.02 40 38 G 1763 Mycobacterium 0.00 1 1 S 1769 Mycobacterium leprae 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 5 1 G 1866885 Mycolicibacterium 0.00 1 0 S 36814 Mycolicibacterium rhodesiae 0.00 1 1 S1 710685 Mycolicibacterium rhodesiae NBB3 0.00 1 1 S 1772 Mycolicibacterium smegmatis 0.00 1 0 G1 2636767 unclassified Mycolicibacterium 0.00 1 1 S 3042320 Mycolicibacterium sp. ND9-15 0.00 1 0 S 46351 Mycolicibacterium hassiacum 0.00 1 1 S1 1122247 Mycolicibacterium hassiacum DSM 44199 0.00 2 1 G 2126281 Mycolicibacillus 0.00 1 1 S 1069220 Mycolicibacillus koreensis 0.00 1 0 G 670516 Mycobacteroides 0.00 1 1 S 83262 Mycobacteroides immunogenum 0.00 1 0 G 1073531 Mycolicibacter 0.00 1 0 G1 2642523 unclassified Mycolicibacter 0.00 1 1 S 3064287 Mycolicibacter sp. MU0083 0.01 18 0 F 85025 Nocardiaceae 0.00 9 2 G 1817 Nocardia 0.00 7 7 S 37332 Nocardia seriolae 0.00 9 8 G 1827 Rhodococcus 0.00 1 0 G1 2840174 Rhodococcus erythropolis group 0.00 1 1 S 334542 Rhodococcus qingshengii 0.01 12 0 F 2805586 Lawsonellaceae 0.01 12 0 G 1847725 Lawsonella 0.01 12 12 S 1528099 Lawsonella clevelandensis 0.00 3 0 F 85026 Gordoniaceae 0.00 3 0 G 2053 Gordonia 0.00 2 2 S 84595 Gordonia polyisoprenivorans 0.00 1 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2742602 Gordonia sp. X0973 0.00 2 0 F 85029 Dietziaceae 0.00 2 2 G 37914 Dietzia 1.77 3230 0 O 2037 Actinomycetales 1.77 3230 60 F 2049 Actinomycetaceae 1.45 2656 1370 G 1654 Actinomyces 0.21 378 203 G1 2609248 unclassified Actinomyces 0.04 81 81 S 1851395 Actinomyces sp. Chiba101 0.04 69 69 S 712122 Actinomyces sp. oral taxon 414 0.01 14 0 S 706438 Actinomyces sp. oral taxon 171 0.01 14 14 S1 706439 Actinomyces sp. oral taxon 171 str. F0337 0.00 5 5 S 2708340 Actinomyces sp. zg-332 0.00 3 3 S 2789425 Actinomyces sp. HMT 175 0.00 1 1 S 712116 Actinomyces sp. oral taxon 169 0.00 1 1 S 2079536 Actinomyces sp. Z16 0.00 1 1 S 2789424 Actinomyces sp. HMT897 0.19 342 342 S 1288391 Actinomyces timonensis 0.09 173 173 S 1960083 Actinomyces gaoshouyii 0.08 143 143 S 1655 Actinomyces naeslundii 0.08 140 140 S 461393 Actinomyces massiliensis 0.02 37 37 S 675090 Actinomyces weissii 0.01 17 16 S 544580 Actinomyces oris 0.00 1 1 S1 871541 Actinomyces oris K20 0.01 12 12 S 2763540 Actinomyces trachealis 0.01 11 11 S 52771 Actinomyces howellii 0.01 11 11 S 2057800 Actinomyces qiguomingii 0.00 8 8 S 1659 Actinomyces israelii 0.00 8 8 S 2560010 Actinomyces procaprae 0.00 3 3 S 52774 Actinomyces slackii 0.00 2 2 S 2744574 Actinomyces respiraculi 0.00 1 1 S 2755559 Actinomyces capricornis 0.16 298 35 G 2529408 Schaalia 0.14 256 256 S 1660 Schaalia odontolytica 0.00 3 0 G1 2691889 unclassified Schaalia 0.00 2 2 S 2709403 Schaalia sp. ZJ405 0.00 1 1 S 2758572 Schaalia sp. JY-X169 0.00 2 2 S 131110 Schaalia radingae 0.00 1 1 S 52773 Schaalia meyeri 0.00 1 1 S 131111 Schaalia turicensis 0.10 186 0 G 2912996 Changpingibacter 0.10 186 186 S 2758440 Changpingibacter yushuensis 0.01 19 0 G 2740557 Pauljensenia 0.01 19 19 S 178339 Pauljensenia hongkongensis 0.00 5 0 G 2692113 Gleimia 0.00 3 3 S 66228 Gleimia europaea 0.00 2 2 S 595468 Gleimia hominis 0.00 2 2 G 1069494 Trueperella 0.00 1 1 G 2050 Mobiluncus 0.00 1 0 G 28263 Arcanobacterium 0.00 1 1 S 999183 Arcanobacterium canis 0.00 1 0 G 76833 Actinobaculum 0.00 1 0 G1 2609299 unclassified Actinobaculum 0.00 1 1 S 2495645 Actinobaculum sp. 313 0.00 1 0 G 184869 Varibaculum 0.00 1 1 S 2811781 Varibaculum prostatecancerukia 0.47 857 23 O 85009 Propionibacteriales 0.45 824 60 F 31957 Propionibacteriaceae 0.36 659 13 G 1912216 Cutibacterium 0.34 629 629 S 1747 Cutibacterium acnes 0.01 14 14 S 33011 Cutibacterium granulosum 0.00 2 2 S 33010 Cutibacterium avidum 0.00 1 1 S 2559073 Cutibacterium modestum 0.04 82 2 G 2801844 Arachnia 0.04 78 78 S 1750 Arachnia propionica 0.00 2 2 S 1547448 Arachnia rubra 0.00 6 1 G 29404 Microlunatus 0.00 3 0 G1 2619695 unclassified Microlunatus 0.00 3 3 S 2672569 Microlunatus sp. Gsoil 973 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.00 1 1 S 630515 Microlunatus soli 0.00 6 0 G 72763 Tessaracoccus 0.00 6 6 S 1285901 Tessaracoccus defluvii 0.00 4 0 G 1743 Propionibacterium 0.00 3 3 S 556499 Propionibacterium acidifaciens 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.00 3 2 G 1911549 Raineyella 0.00 1 1 S 2662261 Raineyella fluvialis 0.00 2 0 G 1912215 Acidipropionibacterium 0.00 2 2 S 1749 Acidipropionibacterium jensenii 0.00 1 1 G 1085622 Propioniciclava 0.00 1 0 G 1278221 Auraticoccus 0.00 1 1 S 675864 Auraticoccus monumenti 0.00 9 0 F 85015 Nocardioidaceae 0.00 6 0 G 1839 Nocardioides 0.00 3 3 S 3095075 Nocardioides renjunii 0.00 2 0 G1 2615069 unclassified Nocardioides 0.00 2 2 S 2976000 Nocardioides sp. NBC_00368 0.00 1 1 S 2685869 Nocardioides ochotonae 0.00 2 1 G 2040 Aeromicrobium 0.00 1 1 S 2079793 Aeromicrobium chenweiae 0.00 1 0 G 116071 Micropruina 0.00 1 1 S 75385 Micropruina glycogenica 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 3002436 Kribbella sp. CA-293567 0.05 96 0 O 85011 Kitasatosporales 0.05 96 2 F 2062 Streptomycetaceae 0.05 94 2 G 1883 Streptomyces 0.02 35 1 G1 2593676 unclassified Streptomyces 0.01 12 12 S 2903645 Streptomyces sp. NBC_00310 0.00 7 7 S 2750025 Streptomyces sp. CB00271 0.00 5 5 S 2099583 Streptomyces sp. ICC1 0.00 3 3 S 3062782 Streptomyces sp. HUAS CX7 0.00 2 2 S 3075825 Streptomyces sp. AM8-1-1 0.00 2 2 S 2903640 Streptomyces sp. NBC_00239 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 2903790 Streptomyces sp. NBC_01237 0.00 1 1 S 3075198 Streptomyces sp. ITFR-16 0.02 35 0 G1 1477431 Streptomyces albidoflavus group 0.02 35 35 S 1886 Streptomyces albidoflavus 0.00 8 8 S 2508722 Streptomyces roseicoloratus 0.00 5 5 S 35621 Streptomyces mobaraensis 0.00 1 0 S 54571 Streptomyces venezuelae 0.00 1 1 S1 953739 Streptomyces venezuelae ATCC 10712 0.00 1 1 S 887464 Streptomyces laculatispora 0.00 1 1 S 33900 Streptomyces murinus 0.00 1 1 S 40318 Streptomyces nodosus 0.00 1 1 S 1077946 Streptomyces hundungensis 0.00 1 1 S 68270 Streptomyces spectabilis 0.00 1 1 S 67287 Streptomyces cinnabarinus 0.00 1 1 S 116188 Streptomyces coeruleorubidus 0.00 1 0 S 1916 Streptomyces lividans 0.00 1 1 S1 1200984 Streptomyces lividans 1326 0.01 25 0 O 85004 Bifidobacteriales 0.01 25 1 F 31953 Bifidobacteriaceae 0.01 24 7 G 1678 Bifidobacterium 0.01 16 3 S 216816 Bifidobacterium longum 0.00 5 5 S1 1679 Bifidobacterium longum subsp. longum 0.00 5 5 S1 1682 Bifidobacterium longum subsp. infantis 0.00 3 3 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 1 1 S 77635 Bifidobacterium subtile 0.01 13 0 O 85014 Glycomycetales 0.01 13 0 F 85034 Glycomycetaceae 0.01 11 0 G 2838311 Natronoglycomyces 0.01 11 11 S 2811108 Natronoglycomyces albus 0.00 2 0 G 283810 Stackebrandtia 0.00 2 0 S 283811 Stackebrandtia nassauensis 0.00 2 2 S1 446470 Stackebrandtia nassauensis DSM 44728 0.01 10 0 O 85010 Pseudonocardiales 0.01 10 0 F 2070 Pseudonocardiaceae 0.00 5 1 G 1847 Pseudonocardia 0.00 4 0 S 240495 Pseudonocardia dioxanivorans 0.00 4 4 S1 675635 Pseudonocardia dioxanivorans CB1190 0.00 2 0 G 1851 Saccharomonospora 0.00 2 0 S 1852 Saccharomonospora viridis 0.00 2 2 S1 471857 Saccharomonospora viridis DSM 43017 0.00 1 0 G 1835 Saccharopolyspora 0.00 1 0 G1 2646250 unclassified Saccharopolyspora 0.00 1 1 S 3118084 Saccharopolyspora sp. SCSIO 74807 0.00 1 1 G 65496 Actinoalloteichus 0.00 1 0 G 1813 Amycolatopsis 0.00 1 0 G1 2618356 unclassified Amycolatopsis 0.00 1 1 S 2914159 Amycolatopsis sp. FU40 0.00 9 0 O 85008 Micromonosporales 0.00 9 8 F 28056 Micromonosporaceae 0.00 1 0 G 1865 Actinoplanes 0.00 1 0 G1 2626549 unclassified Actinoplanes 0.00 1 1 S 946334 Actinoplanes sp. OR16 0.00 7 0 O 2039638 Candidatus Nanopelagicales 0.00 7 0 F 2162846 Candidatus Nanopelagicaceae 0.00 4 1 G 2039639 Candidatus Nanopelagicus 0.00 3 3 S 1884915 Candidatus Nanopelagicus hibericus 0.00 3 0 G 622681 Candidatus Planktophila 0.00 3 3 S 1884913 Candidatus Planktophila lacus 0.00 4 0 O 85012 Streptosporangiales 0.00 3 0 F 83676 Nocardiopsaceae 0.00 2 0 G 2013 Nocardiopsis 0.00 1 1 S 163604 Nocardiopsis exhalans 0.00 1 0 S 280236 Nocardiopsis gilva 0.00 1 1 S1 1235441 Nocardiopsis gilva YIM 90087 0.00 1 0 G 2913367 Spiractinospora 0.00 1 1 S 2820884 Spiractinospora alimapuensis 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 2000 Streptosporangium 0.00 1 1 G1 2632669 unclassified Streptosporangium 0.00 4 0 O 85013 Frankiales 0.00 4 1 F 74712 Frankiaceae 0.00 3 0 G 1854 Frankia 0.00 3 3 S 106370 Frankia casuarinae 0.00 2 0 O 622450 Actinopolysporales 0.00 2 0 F 622451 Actinopolysporaceae 0.00 2 0 G 1849 Actinopolyspora 0.00 2 2 S 414996 Actinopolyspora erythraea 0.00 2 0 O 1643682 Geodermatophilales 0.00 2 0 F 85030 Geodermatophilaceae 0.00 2 0 G 1860 Geodermatophilus 0.00 2 0 S 1861 Geodermatophilus obscurus 0.00 2 2 S1 526225 Geodermatophilus obscurus DSM 43160 0.00 1 0 O 414714 Catenulisporales 0.00 1 0 F 414877 Catenulisporaceae 0.00 1 0 G 414878 Catenulispora 0.00 1 0 S 304895 Catenulispora acidiphila 0.00 1 1 S1 479433 Catenulispora acidiphila DSM 44928 0.04 69 1 C 84998 Coriobacteriia 0.02 38 0 O 84999 Coriobacteriales 0.02 35 2 F 1643824 Atopobiaceae 0.01 18 4 G 2767353 Lancefieldella 0.01 10 0 G1 2978947 unclassified Lancefieldella 0.01 10 10 S 3022127 Lancefieldella sp. Marseille-Q7238 0.00 4 0 S 1382 Lancefieldella parvula 0.00 4 4 S1 521095 Lancefieldella parvula DSM 20469 0.01 10 0 G 133925 Olsenella 0.00 9 0 G1 2638792 unclassified Olsenella 0.00 9 9 S 712411 Olsenella sp. oral taxon 807 0.00 1 0 S 133926 Olsenella uli 0.00 1 1 S1 633147 Olsenella uli DSM 7084 0.00 4 0 G 1380 Atopobium 0.00 4 0 G1 2643817 unclassified Atopobium 0.00 4 4 S 712157 Atopobium sp. oral taxon 416 0.00 1 0 G 2847312 Parafannyhessea 0.00 1 1 S 604330 Parafannyhessea umbonata 0.00 3 0 F 84107 Coriobacteriaceae 0.00 2 0 G 102106 Collinsella 0.00 2 2 S 74426 Collinsella aerofaciens 0.00 1 0 G 33870 Coriobacterium 0.00 1 0 S 33871 Coriobacterium glomerans 0.00 1 1 S1 700015 Coriobacterium glomerans PW2 0.02 30 0 O 1643822 Eggerthellales 0.02 30 3 F 1643826 Eggerthellaceae 0.01 17 0 G 1926677 Raoultibacter 0.01 17 17 S 1907662 Raoultibacter timonensis 0.00 4 0 G 79603 Denitrobacterium 0.00 4 4 S 79604 Denitrobacterium detoxificans 0.00 3 3 G 447020 Adlercreutzia 0.00 2 0 G 84162 Cryptobacterium 0.00 2 0 S 84163 Cryptobacterium curtum 0.00 2 2 S1 469378 Cryptobacterium curtum DSM 15641 0.00 1 1 G 644652 Gordonibacter 0.00 6 0 C 1497346 Thermoleophilia 0.00 4 3 O 588673 Solirubrobacterales 0.00 1 0 F 320583 Conexibacteraceae 0.00 1 0 G 191494 Conexibacter 0.00 1 0 S 191495 Conexibacter woesei 0.00 1 1 S1 469383 Conexibacter woesei DSM 14684 0.00 2 0 O 588674 Thermoleophilales 0.00 2 0 F 320796 Thermoleophilaceae 0.00 2 0 G 192992 Thermoleophilum 0.00 2 2 S 29539 Thermoleophilum album 0.00 4 0 C 84995 Rubrobacteria 0.00 4 0 O 84996 Rubrobacterales 0.00 4 0 F 84997 Rubrobacteraceae 0.00 4 2 G 42255 Rubrobacter 0.00 2 2 S 2653851 Rubrobacter tropicus 0.00 3 0 C 84992 Acidimicrobiia 0.00 3 2 O 84993 Acidimicrobiales 0.00 1 0 F 633392 Iamiaceae 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.41 746 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.41 746 35 P 1117 Cyanobacteriota 0.39 711 126 C 3028117 Cyanophyceae 0.21 376 1 C1 1301283 Oscillatoriophycideae 0.16 290 6 O 1150 Oscillatoriales 0.14 261 0 F 2934961 Sirenicapillariaceae 0.14 261 0 G 2596745 Limnospira 0.14 261 1 S 147322 Limnospira indica 0.14 252 252 S1 2760438 Limnospira indica BM01 0.00 8 8 S1 376219 Limnospira indica PCC 8005 0.01 14 0 F 1892252 Microcoleaceae 0.01 11 11 G 54304 Planktothrix 0.00 3 0 G 1492710 Oxynema 0.00 3 0 S 2874213 Oxynema aestuarii 0.00 3 3 S1 2064643 Oxynema aestuarii AP17 0.00 7 0 F 1892254 Oscillatoriaceae 0.00 7 0 G 1198 Phormidium 0.00 7 0 S 2974039 Phormidium yuhuli 0.00 7 7 S1 2940671 Phormidium yuhuli AB48 0.00 2 0 O1 1892256 Oscillatoriales incertae sedis 0.00 2 0 G 2023214 Koinonema 0.00 2 0 G1 2781947 unclassified Koinonema 0.00 2 2 S 222819 [Phormidium] sp. ETS-05 0.05 85 2 O 1118 Chroococcales 0.02 44 0 F 1890449 Microcystaceae 0.02 44 0 G 1125 Microcystis 0.02 44 0 G1 2643300 unclassified Microcystis 0.02 44 44 S 1967666 Microcystis sp. MC19 0.02 31 0 F 1890450 Aphanothecaceae 0.02 31 0 G 1453359 Candidatus Atelocyanobacterium 0.02 31 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.02 31 31 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 5 1 F 2815910 Geminocystaceae 0.00 3 3 G 102234 Cyanobacterium 0.00 1 1 G 669357 Geminocystis 0.00 3 3 F 1890464 Chroococcaceae 0.05 87 0 O 1955042 Gloeomargaritales 0.05 87 0 F 1955043 Gloeomargaritaceae 0.05 87 0 G 1188227 Gloeomargarita 0.05 87 0 S 1188228 Gloeomargarita lithophora 0.05 87 87 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.02 39 5 O 1161 Nostocales 0.01 18 0 F 1892259 Aphanizomenonaceae 0.01 13 0 G 752201 Sphaerospermopsis 0.01 13 0 S 984207 Sphaerospermopsis torques-reginae 0.01 13 13 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 5 0 G 748770 Dolichospermum 0.00 5 0 S 136073 Dolichospermum compactum 0.00 5 5 S1 1973481 Dolichospermum compactum NIES-806 0.00 9 6 F 1162 Nostocaceae 0.00 2 1 G 1177 Nostoc 0.00 1 0 G1 2593658 unclassified Nostoc 0.00 1 1 S 1869241 Nostoc sp. CENA543 0.00 1 0 G 98443 Richelia 0.00 1 0 S 1357545 Richelia sinica 0.00 1 1 S1 1357546 Richelia sinica FACHB-800 0.00 4 0 F 1185 Rivulariaceae 0.00 4 0 G 373984 Rivularia 0.00 4 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 4 4 S 373994 Rivularia sp. PCC 7116 0.00 2 0 F 2661849 Calotrichaceae 0.00 2 0 G 1186 Calothrix 0.00 2 0 G1 2619626 unclassified Calothrix 0.00 1 1 S 1170562 Calothrix sp. PCC 6303 0.00 1 1 S 2005462 Calothrix sp. NIES-3974 0.00 1 0 F 1892263 Hapalosiphonaceae 0.00 1 0 G 1190 Fischerella 0.00 1 0 G1 494603 unclassified Fischerella 0.00 1 1 S 1752063 Fischerella sp. NIES-3754 0.02 33 0 O 1890424 Synechococcales 0.02 33 0 F 1890426 Synechococcaceae 0.02 33 0 G 1129 Synechococcus 0.02 30 1 G1 2626047 unclassified Synechococcus 0.01 21 21 S 195250 Synechococcus sp. PCC 7336 0.00 8 8 S 321327 Synechococcus sp. JA-3-3Ab 0.00 3 1 S 32046 Synechococcus elongatus 0.00 1 1 S1 269084 Synechococcus elongatus PCC 6301 0.00 1 1 S1 3115655 Synechococcus elongatus IITB5 0.01 18 16 O 307595 Gloeobacterales 0.00 2 0 F 1890422 Gloeobacteraceae 0.00 2 2 G 33071 Gloeobacter 0.01 10 0 O 2881377 Pseudanabaenales 0.01 10 0 F 1890436 Pseudanabaenaceae 0.01 10 1 G 1152 Pseudanabaena 0.00 9 0 G1 2593292 unclassified Pseudanabaena 0.00 9 9 S 82654 Pseudanabaena sp. PCC 7367 0.01 10 0 O 3079757 Gomontiellales 0.01 10 0 F 1890431 Chamaesiphonaceae 0.01 10 0 G 217161 Chamaesiphon 0.01 10 0 S 1173032 Chamaesiphon minutus 0.01 10 10 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 5 0 O 3079749 Leptolyngbyales 0.00 4 0 F 1890438 Leptolyngbyaceae 0.00 4 0 F1 3081713 Leptolyngbya group 0.00 4 0 G 47251 Leptolyngbya 0.00 4 0 G1 2650499 unclassified Leptolyngbya 0.00 3 3 S 2812896 Leptolyngbya sp. 7M 0.00 1 1 S 1080068 Leptolyngbya sp. O-77 0.00 1 0 F 2303527 Trichocoleusaceae 0.00 1 0 G 3045815 Trichothermofontia 0.00 1 0 S 3045816 Trichothermofontia sichuanensis 0.00 1 1 S1 2016064 Trichothermofontia sichuanensis B231 0.00 2 0 O 1890505 Chroococcidiopsidales 0.00 2 0 F 1890528 Chroococcidiopsidaceae 0.00 2 2 G 54298 Chroococcidiopsis 0.00 2 0 O 3039985 Nodosilineales 0.00 2 0 F 3039986 Nodosilineaceae 0.00 2 0 G 170610 Halomicronema 0.00 2 0 S 1209493 Halomicronema hongdechloris 0.00 2 2 S1 1641165 Halomicronema hongdechloris C2206 0.00 2 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 0 G1 2631661 unclassified Acaryochloris 0.00 1 1 S 2740837 Acaryochloris sp. 'Moss Beach' 0.00 1 0 F 2881378 Thermosynechococcaceae 0.00 1 1 G 146785 Thermosynechococcus 0.00 1 0 O 3079753 Coleofasciculales 0.00 1 0 F 1892251 Coleofasciculaceae 0.00 1 0 G 2886347 Allocoleopsis 0.00 1 0 S 2886352 Allocoleopsis franciscana 0.00 1 1 S1 1173027 Allocoleopsis franciscana PCC 7113 0.12 224 99 P 544448 Mycoplasmatota 0.04 78 6 C 31969 Mollicutes 0.03 48 0 O 2085 Mycoplasmatales 0.02 44 0 F 2092 Mycoplasmataceae 0.02 44 0 G 2093 Mycoplasma 0.02 30 6 G1 2683645 unclassified Mycoplasma 0.01 19 19 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 3 3 S 2801918 Mycoplasma sp. E35C 0.00 2 2 S 2967302 Mycoplasma sp. 1018B 0.01 13 2 G1 656088 Mycoplasma mycoides group 0.01 10 10 S 1179777 Mycoplasma feriruminatoris 0.00 1 0 S 2095 Mycoplasma capricolum 0.00 1 1 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 1 S 292461 Mycoplasma iguanae 0.00 4 0 O1 1665628 unclassified Mycoplasmatales 0.00 4 4 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.01 19 1 O 186328 Entomoplasmatales 0.01 18 0 F 2131 Spiroplasmataceae 0.01 18 5 G 2132 Spiroplasma 0.01 11 8 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3066303 Spiroplasma endosymbiont of Sarcophaga carnaria 0.00 1 1 S 3066286 Spiroplasma endosymbiont of Crioceris asparagi 0.00 1 1 S 3066313 Spiroplasma endosymbiont of Zeiraphera isertana 0.00 2 2 S 2139 Spiroplasma clarkii 0.00 5 0 O 186329 Acholeplasmatales 0.00 5 0 F 2146 Acholeplasmataceae 0.00 3 0 G 2147 Acholeplasma 0.00 3 3 S 2148 Acholeplasma laidlawii 0.00 2 0 G 33926 Candidatus Phytoplasma 0.00 2 0 G1 85630 16SrX (Apple proliferation group) 0.00 2 2 S 37692 Candidatus Phytoplasma mali 0.02 43 0 O 2790996 Mycoplasmoidales 0.01 24 11 F 2790998 Mycoplasmoidaceae 0.00 9 8 G 2995234 Mycoplasmoides 0.00 1 1 S 92758 Mycoplasmoides fastidiosum 0.00 4 0 G 2791001 Malacoplasma 0.00 3 0 S 28227 Malacoplasma penetrans 0.00 3 3 S1 272633 Malacoplasma penetrans HF-2 0.00 1 1 S 2116 Malacoplasma iowae 0.01 19 0 F 2895623 Metamycoplasmataceae 0.01 16 2 G 2767358 Mycoplasmopsis 0.00 8 8 S 55603 Mycoplasmopsis caviae 0.00 4 4 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 2110 Mycoplasmopsis agalactiae 0.00 1 1 S 2113 Mycoplasmopsis californica 0.00 3 1 G 2895509 Metamycoplasma 0.00 1 1 S 2098 Metamycoplasma hominis 0.00 1 1 S 45363 Metamycoplasma alkalescens 0.00 4 0 C 1912503 Candidatus Izimaplasma 0.00 4 0 O 2975519 Candidatus Izemoplasmatales 0.00 3 0 F 2975520 Candidatus Izemoplasmataceae 0.00 3 0 G 2975521 Candidatus Xianfuyuplasma 0.00 3 3 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.00 1 0 F 3078170 Hujiaoplasmataceae 0.00 1 0 G 3078171 Hujiaoplasma 0.00 1 1 S 2725268 Hujiaoplasma nucleasis 0.04 77 1 P 200795 Chloroflexota 0.02 32 0 C 388447 Ktedonobacteria 0.02 32 0 O 388448 Ktedonobacterales 0.02 32 0 F 2692416 Ktedonosporobacteraceae 0.02 32 0 G 2692417 Ktedonosporobacter 0.02 32 32 S 2509675 Ktedonosporobacter rubrisoli 0.01 13 8 C 32061 Chloroflexia 0.00 4 1 O 32064 Chloroflexales 0.00 3 0 O1 1508594 Chloroflexineae 0.00 3 0 F 1106 Chloroflexaceae 0.00 3 2 G 1107 Chloroflexus 0.00 1 0 S 152260 Chloroflexus aggregans 0.00 1 1 S1 326427 Chloroflexus aggregans DSM 9485 0.00 1 0 O 3139175 Candidatus Chloroheliales 0.00 1 0 F 3139177 Candidatus Chloroheliaceae 0.00 1 0 G 3139173 Candidatus Chlorohelix 0.00 1 1 S 3003348 Candidatus Chlorohelix allophototropha 0.01 11 0 C 301297 Dehalococcoidia 0.01 11 0 O 1202465 Dehalococcoidales 0.01 11 0 F 1202464 Dehalococcoidaceae 0.00 7 7 G 61434 Dehalococcoides 0.00 4 4 G 670486 Dehalogenimonas 0.00 6 0 C 292625 Anaerolineae 0.00 6 0 O 292629 Anaerolineales 0.00 6 0 F 292628 Anaerolineaceae 0.00 4 0 G 1649478 Pelolinea 0.00 4 4 S 913107 Pelolinea submarina 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 6 0 C 1382928 Ardenticatenia 0.00 6 0 O 3085098 Candidatus Promineifilales 0.00 6 0 F 3085097 Candidatus Promineifilaceae 0.00 6 0 G 1988031 Candidatus Promineifilum 0.00 6 6 S 1806508 Candidatus Promineifilum breve 0.00 6 0 C 2682225 Tepidiformia 0.00 6 0 O 2682226 Tepidiformales 0.00 6 0 F 2682227 Tepidiformaceae 0.00 6 5 G 2682228 Tepidiforma 0.00 1 1 S 2601677 Tepidiforma bonchosmolovskayae 0.00 2 0 C 475962 Caldilineae 0.00 2 0 O 475963 Caldilineales 0.00 2 0 F 475964 Caldilineaceae 0.00 2 0 G 233191 Caldilinea 0.00 2 0 S 133453 Caldilinea aerophila 0.00 2 2 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.04 69 0 P 67819 Armatimonadota 0.04 64 0 C 1077257 Chthonomonadia 0.04 64 0 O 1077263 Chthonomonadales 0.04 64 0 F 1077264 Chthonomonadaceae 0.04 64 0 G 1077265 Chthonomonas 0.04 64 0 S 454171 Chthonomonas calidirosea 0.04 64 64 S1 1303518 Chthonomonas calidirosea T49 0.00 5 0 C 1663419 Fimbriimonadia 0.00 5 0 O 1663425 Fimbriimonadales 0.00 5 0 F 1663426 Fimbriimonadaceae 0.00 5 0 G 1005038 Fimbriimonas 0.00 5 0 S 1005039 Fimbriimonas ginsengisoli 0.00 5 5 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.01 22 0 P 1297 Deinococcota 0.01 22 0 C 188787 Deinococci 0.01 16 0 O 118964 Deinococcales 0.01 16 0 F 183710 Deinococcaceae 0.01 16 11 G 1298 Deinococcus 0.00 2 0 S 55148 Deinococcus proteolyticus 0.00 2 2 S1 693977 Deinococcus proteolyticus MRP 0.00 2 0 G1 2623546 unclassified Deinococcus 0.00 2 2 S 2080419 Deinococcus sp. NW-56 0.00 1 0 S 432329 Deinococcus peraridilitoris 0.00 1 1 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 6 0 O 68933 Thermales 0.00 6 1 F 188786 Thermaceae 0.00 4 0 G 186191 Marinithermus 0.00 4 0 S 186192 Marinithermus hydrothermalis 0.00 4 4 S1 869210 Marinithermus hydrothermalis DSM 14884 0.00 1 1 G 270 Thermus 0.00 4 0 P 3027942 Thermomicrobiota 0.00 4 0 C 189775 Thermomicrobia 0.00 4 0 O 85001 Sphaerobacterales 0.00 4 0 O1 255728 Sphaerobacterineae 0.00 4 0 F 85002 Sphaerobacteraceae 0.00 4 0 G 2056 Sphaerobacter 0.00 4 0 S 2057 Sphaerobacter thermophilus 0.00 4 4 S1 479434 Sphaerobacter thermophilus DSM 20745 11.20 20440 0 P 32066 Fusobacteriota 11.20 20440 0 C 203490 Fusobacteriia 11.20 20440 6 O 203491 Fusobacteriales 9.00 16437 6 F 1129771 Leptotrichiaceae 9.00 16431 1801 G 32067 Leptotrichia 4.35 7941 7941 S 157687 Leptotrichia wadei 1.99 3626 3626 S 554406 Leptotrichia hongkongensis 1.03 1873 106 G1 2633022 unclassified Leptotrichia 0.61 1117 1117 S 712357 Leptotrichia sp. oral taxon 212 0.25 462 462 S 712362 Leptotrichia sp. oral taxon 221 0.05 88 88 S 712361 Leptotrichia sp. oral taxon 218 0.02 43 43 S 3058373 Leptotrichia sp. HMT-225 0.02 32 32 S 712368 Leptotrichia sp. oral taxon 498 0.01 25 25 S 1785996 Leptotrichia sp. oral taxon 847 0.55 1004 1004 S 157688 Leptotrichia hofstadii 0.07 123 123 S 157691 Leptotrichia shahii 0.02 37 37 S 109328 Leptotrichia trevisanii 0.01 26 0 S 40542 Leptotrichia buccalis 0.01 26 26 S1 523794 Leptotrichia buccalis C-1013-b 2.19 3994 0 F 203492 Fusobacteriaceae 2.19 3993 3507 G 848 Fusobacterium 0.08 141 136 S 76857 Fusobacterium polymorphum 0.00 5 5 S1 393480 Fusobacterium polymorphum ATCC 10953 0.06 101 101 S 851 Fusobacterium nucleatum 0.04 72 0 S 1583098 Fusobacterium hwasookii 0.03 61 61 S1 1307443 Fusobacterium hwasookii ChDC F206 0.01 11 11 S1 1307442 Fusobacterium hwasookii ChDC F174 0.03 61 60 S 76859 Fusobacterium animalis 0.00 1 1 S1 457405 Fusobacterium animalis 7_1 0.02 43 43 S 2764326 Fusobacterium hominis 0.02 36 11 S 155615 Fusobacterium vincentii 0.01 25 25 S1 1307427 Fusobacterium vincentii ChDC F8 0.01 14 12 S 859 Fusobacterium necrophorum 0.00 2 2 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.01 10 0 S 850 Fusobacterium mortiferum 0.01 10 10 S1 469616 Fusobacterium mortiferum ATCC 9817 0.00 6 0 G1 2648384 unclassified Fusobacterium 0.00 6 6 S 671211 Fusobacterium sp. oral taxon 203 0.00 1 0 S 849 Fusobacterium gonidiaformans 0.00 1 1 S1 469615 Fusobacterium gonidiaformans ATCC 25563 0.00 1 1 S 2663009 Fusobacterium pseudoperiodonticum 0.00 1 0 G 180162 Cetobacterium 0.00 1 1 S 188913 Cetobacterium somerae 0.00 3 0 F 3072461 Haliovirgaceae 0.00 3 0 G 3072462 Haliovirga 0.00 3 3 S 2996794 Haliovirga abyssi 9.62 17563 0 D1 1783270 FCB group 9.62 17561 3 D2 68336 Bacteroidota/Chlorobiota group 9.61 17539 31 P 976 Bacteroidota 5.04 9193 0 C 117743 Flavobacteriia 5.04 9193 7 O 200644 Flavobacteriales 4.76 8696 115 F 49546 Flavobacteriaceae 4.68 8542 734 G 1016 Capnocytophaga 1.94 3543 3543 S 1017 Capnocytophaga gingivalis 1.25 2274 2274 S 1019 Capnocytophaga sputigena 0.75 1374 1374 S 327575 Capnocytophaga leadbetteri 0.27 484 58 G1 2640652 unclassified Capnocytophaga 0.23 413 413 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 8 8 S 2748316 Capnocytophaga sp. oral taxon 902 0.00 5 5 S 1316596 Capnocytophaga sp. oral taxon 878 0.04 80 80 S 2708117 Capnocytophaga endodontalis 0.03 48 48 S 45243 Capnocytophaga haemolytica 0.00 3 3 S 28188 Capnocytophaga canimorsus 0.00 2 2 S 1848904 Capnocytophaga stomatis 0.01 19 5 G 237 Flavobacterium 0.00 9 9 S 2906078 Flavobacterium oreochromis 0.00 3 3 S 2704140 Flavobacterium bizetiae 0.00 2 2 S 3034146 Flavobacterium panacagri 0.00 7 0 G 286104 Winogradskyella 0.00 5 5 S 2686077 Winogradskyella forsetii 0.00 2 0 G1 2615021 unclassified Winogradskyella 0.00 1 1 S 754409 Winogradskyella sp. PG-2 0.00 1 1 S 2749995 Winogradskyella sp. HaHa_3_26 0.00 6 0 G 2715289 Amniculibacterium 0.00 6 0 G1 2767187 unclassified Amniculibacterium 0.00 6 6 S 2767188 Amniculibacterium sp. G2-70 0.00 3 0 G 52959 Polaribacter 0.00 3 0 G1 196858 unclassified Polaribacter 0.00 2 2 S 313598 Polaribacter sp. MED152 0.00 1 1 S 1855336 Polaribacter sp. KT25b 0.00 1 0 G 2967089 Abyssalbus 0.00 1 1 S 2926907 Abyssalbus ytuae 0.00 1 0 G 2953860 Candidatus Arcticimaribacter 0.00 1 1 S 2820661 Candidatus Arcticimaribacter forsetii 0.00 1 0 G 111500 Allomuricauda 0.00 1 0 G1 2615049 unclassified Allomuricauda 0.00 1 1 S 2908843 Muricauda sp. SCSIO 65647 0.00 1 1 G 292691 Christiangramia 0.25 465 182 F 2762318 Weeksellaceae 0.07 135 1 G 59735 Bergeyella 0.07 122 122 S 1585976 Bergeyella cardium 0.01 12 12 S 1735111 Bergeyella porcorum 0.05 94 0 F1 2782232 Chryseobacterium group 0.05 89 1 G 59732 Chryseobacterium 0.05 86 0 G1 2593645 unclassified Chryseobacterium 0.05 85 85 S 2713414 Chryseobacterium sp. POL2 0.00 1 1 S 3093923 Chryseobacterium sp. JJR-5R 0.00 1 1 S 253 Chryseobacterium indologenes 0.00 1 1 S 651561 Chryseobacterium arthrosphaerae 0.00 5 0 G 2782231 Kaistella 0.00 5 5 S 2820270 Candidatus Kaistella beijingensis 0.01 22 0 G 34084 Riemerella 0.01 22 22 S 34085 Riemerella anatipestifer 0.01 22 0 G 308865 Elizabethkingia 0.01 22 0 G1 2685307 unclassified Elizabethkingia 0.01 22 22 S 2583851 Elizabethkingia sp. JS20170427COW 0.00 5 0 G 1778601 Apibacter 0.00 5 5 G1 2630820 unclassified Apibacter 0.00 3 0 G 28250 Ornithobacterium 0.00 3 3 S 2497989 Candidatus Ornithobacterium hominis 0.00 2 0 G 59734 Empedobacter 0.00 2 2 S 247 Empedobacter brevis 0.01 19 0 O1 313602 Flavobacteriales incertae sedis 0.01 18 0 G 336809 Candidatus Karelsulcia 0.01 18 18 S 336810 Candidatus Karelsulcia muelleri 0.00 1 0 G 1940138 Candidatus Walczuchella 0.00 1 1 S 1415657 Candidatus Walczuchella monophlebidarum 0.00 4 0 F 1755828 Ichthyobacteriaceae 0.00 4 0 G 1755829 Ichthyobacterium 0.00 4 4 S 242600 Ichthyobacterium seriolicida 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 0 G 34098 Blattabacterium 0.00 1 1 S 1653831 Blattabacterium cuenoti 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 3024544 Paracrocinitomix 0.00 1 1 S 2862509 Paracrocinitomix mangrovi 4.50 8211 3 C 200643 Bacteroidia 4.43 8084 60 O 171549 Bacteroidales 3.50 6396 292 F 171552 Prevotellaceae 2.35 4287 391 G 838 Prevotella 1.49 2722 2 G1 2638335 unclassified Prevotella 1.42 2588 2588 S 712471 Prevotella sp. oral taxon 475 0.06 107 107 S 2937774 Prevotella sp. E15-22 0.01 20 0 S 652716 Prevotella sp. oral taxon 299 0.01 20 20 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 5 5 S 2691580 Prevotella sp. Rep29 0.28 515 515 S 2801997 Prevotella herbatica 0.15 265 264 S 28132 Prevotella melaninogenica 0.00 1 1 S1 553174 Prevotella melaninogenica ATCC 25845 0.10 179 179 S 28128 Prevotella corporis 0.04 79 79 S 28133 Prevotella nigrescens 0.04 65 65 S 470565 Prevotella histicola 0.02 30 30 S 28131 Prevotella intermedia 0.01 15 15 S 28129 Prevotella denticola 0.01 12 0 S 589436 Prevotella fusca 0.01 12 12 S1 1236517 Prevotella fusca JCM 17724 0.00 7 0 S 52227 Prevotella dentalis 0.00 7 7 S1 908937 Prevotella dentalis DSM 3688 0.00 3 3 S 28125 Prevotella bivia 0.00 2 2 S 28137 Prevotella veroralis 0.00 2 2 S 1177574 Prevotella jejuni 0.68 1240 0 G 2884814 Pseudoprevotella 0.68 1240 1240 S 2133944 Pseudoprevotella muciniphila 0.21 384 42 G 2974251 Segatella 0.14 250 250 S 28135 Segatella oris 0.05 87 82 S 165179 Segatella copri 0.00 5 5 S1 537011 Segatella copri DSM 18205 0.00 4 4 S 2518605 Segatella hominis 0.00 1 1 S 77095 Segatella bryantii 0.10 186 0 G 2974257 Hoylesella 0.06 105 105 S 76123 Hoylesella enoeca 0.04 81 81 S 28127 Hoylesella buccalis 0.00 7 7 G 577309 Paraprevotella 0.52 941 0 F 171551 Porphyromonadaceae 0.51 938 0 G 836 Porphyromonas 0.51 933 0 G1 2645799 unclassified Porphyromonas 0.51 933 933 S 712435 Porphyromonas sp. oral taxon 275 0.00 4 4 S 322095 Porphyromonas somerae 0.00 1 1 S 837 Porphyromonas gingivalis 0.00 3 0 G 1159323 Macellibacteroides 0.00 3 0 G1 1243006 environmental samples 0.00 3 3 S 1243007 uncultured Macellibacteroides sp. 0.33 597 3 F 2005525 Tannerellaceae 0.32 591 2 G 195950 Tannerella 0.32 588 588 S 712710 Tannerella serpentiformis 0.00 1 1 S 28112 Tannerella forsythia 0.00 3 2 G 375288 Parabacteroides 0.00 1 1 S 823 Parabacteroides distasonis 0.01 20 1 F 2005473 Muribaculaceae 0.00 7 0 G 2518497 Paramuribaculum 0.00 7 7 S 2094151 Paramuribaculum intestinale 0.00 6 3 G 1918540 Muribaculum 0.00 3 3 S 2530390 Muribaculum gordoncarteri 0.00 6 0 G 2815786 Sodaliphilus 0.00 6 6 S 2606626 Sodaliphilus pleomorphus 0.01 17 3 F 2005519 Barnesiellaceae 0.01 12 11 G 397864 Barnesiella 0.00 1 0 S 397865 Barnesiella viscericola 0.00 1 1 S1 880074 Barnesiella viscericola DSM 18177 0.00 2 0 G 1348911 Coprobacter 0.00 2 2 S 1099853 Coprobacter fastidiosus 0.01 15 3 F 815 Bacteroidaceae 0.01 11 1 G 816 Bacteroides 0.00 3 3 S 329854 Bacteroides intestinalis 0.00 2 0 G1 139043 environmental samples 0.00 2 2 S 162156 uncultured Bacteroides sp. 0.00 2 2 S 817 Bacteroides fragilis 0.00 1 1 S 28111 Bacteroides eggerthii 0.00 1 1 S 28113 Bacteroides heparinolyticus 0.00 1 1 S 477666 Bacteroides graminisolvens 0.00 1 0 G 909656 Phocaeicola 0.00 1 1 S 821 Phocaeicola vulgatus 0.01 15 0 F 171550 Rikenellaceae 0.01 14 0 G 1647173 Acetobacteroides 0.01 14 0 G1 1760810 environmental samples 0.01 14 14 S 1760811 uncultured Acetobacteroides sp. 0.00 1 1 G 239759 Alistipes 0.01 14 0 F 2005520 Dysgonomonadaceae 0.01 12 11 G 156973 Dysgonomonas 0.00 1 1 G1 2630389 unclassified Dysgonomonas 0.00 1 0 G 294702 Proteiniphilum 0.00 1 1 S 2829812 Proteiniphilum propionicum 0.00 1 1 G 307628 Petrimonas 0.00 4 0 F 2760872 Tenuifilaceae 0.00 4 0 G 2760873 Tenuifilum 0.00 4 4 S 2590900 Tenuifilum thalassicum 0.00 3 0 F 2005523 Paludibacteraceae 0.00 3 0 G 346096 Paludibacter 0.00 3 0 S 185300 Paludibacter propionicigenes 0.00 3 3 S1 694427 Paludibacter propionicigenes WB4 0.00 2 0 F 1853231 Odoribacteraceae 0.00 1 0 G 283168 Odoribacter 0.00 1 1 S 28118 Odoribacter splanchnicus 0.00 1 1 G 574697 Butyricimonas 0.07 124 0 O 1970189 Marinilabiliales 0.06 108 19 F 1471398 Prolixibacteraceae 0.05 88 0 G 1254401 Sunxiuqinia 0.05 88 0 G1 1573824 environmental samples 0.05 88 88 S 1573825 uncultured Sunxiuqinia sp. 0.00 1 0 G 1573808 Mangrovibacterium 0.00 1 1 S 1639118 Mangrovibacterium marinum 0.01 12 8 F 1573805 Marinifilaceae 0.00 4 0 G 866673 Marinifilum 0.00 4 0 G1 866674 environmental samples 0.00 4 4 S 1127472 uncultured Marinifilum sp. 0.00 4 0 F 558415 Marinilabiliaceae 0.00 4 0 G 1193324 Alkalitalea 0.00 4 4 S 889453 Alkalitalea saponilacus 0.04 72 0 C 768503 Cytophagia 0.04 72 3 O 768507 Cytophagales 0.02 42 0 F 89373 Cytophagaceae 0.02 42 0 G 107 Spirosoma 0.02 37 37 S 2666025 Spirosoma endbachense 0.00 3 0 G1 2621999 unclassified Spirosoma 0.00 3 3 S 2745947 Spirosoma sp. KUDC1026 0.00 1 1 S 2728024 Spirosoma rhododendri 0.00 1 1 S 2735870 Spirosoma taeanense 0.01 14 0 F 1853232 Hymenobacteraceae 0.01 12 10 G 89966 Hymenobacter 0.00 1 1 S 2607656 Hymenobacter busanensis 0.00 1 0 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 2987689 Hymenobacter sp. YIM 151500-1 0.00 2 0 G 323449 Pontibacter 0.00 2 0 G1 2648980 unclassified Pontibacter 0.00 2 2 S 3074898 Pontibacter sp. G13 0.00 4 0 F 1501348 Amoebophilaceae 0.00 4 1 G 273135 Candidatus Cardinium 0.00 2 2 S 247481 Candidatus Cardinium hertigii 0.00 1 0 G1 2641185 unclassified Candidatus Cardinium 0.00 1 1 S 650378 Cardinium endosymbiont of Sogatella furcifera 0.00 4 0 F 3141702 Leadbetterellaceae 0.00 4 2 G 312278 Emticicia 0.00 2 0 S 312279 Emticicia oligotrophica 0.00 2 2 S1 929562 Emticicia oligotrophica DSM 17448 0.00 2 0 F 200667 Flammeovirgaceae 0.00 2 0 G 1649461 Imperialibacter 0.00 2 2 S 1324217 Imperialibacter roseus 0.00 2 0 F 2762301 Marivirgaceae 0.00 2 2 G 869806 Marivirga 0.00 1 0 F 1853234 Persicobacteraceae 0.00 1 0 G 1434007 Fulvitalea 0.00 1 1 S 1182444 Fulvitalea axinellae 0.02 28 0 C 117747 Sphingobacteriia 0.02 28 0 O 200666 Sphingobacteriales 0.01 19 1 F 84566 Sphingobacteriaceae 0.00 7 0 G 84567 Pedobacter 0.00 7 7 S 188932 Pedobacter cryoconitis 0.00 6 0 G 1649482 Pseudopedobacter 0.00 6 0 S 151895 Pseudopedobacter saltans 0.00 6 6 S1 762903 Pseudopedobacter saltans DSM 12145 0.00 4 1 G 28453 Sphingobacterium 0.00 3 0 G1 2609468 unclassified Sphingobacterium 0.00 2 2 S 3112958 Sphingobacterium sp. R2 0.00 1 1 S 2996035 Sphingobacterium sp. SYP-B4668 0.00 1 0 G 423349 Mucilaginibacter 0.00 1 0 G1 2617802 unclassified Mucilaginibacter 0.00 1 1 S 2703789 Mucilaginibacter sp. 14171R-50 0.00 9 0 F 3088888 Aurantibacillaceae 0.00 9 0 G 3088889 Aurantibacillus 0.00 9 9 S 3036359 Aurantibacillus circumpalustris 0.00 4 0 C 1853228 Chitinophagia 0.00 4 0 O 1853229 Chitinophagales 0.00 4 0 F 563835 Chitinophagaceae 0.00 4 0 G 2812019 Pseudocnuella 0.00 4 4 S 2502779 Pseudocnuella soli 0.01 12 0 P 1853220 Rhodothermota 0.01 12 0 C 1853222 Rhodothermia 0.01 12 10 O 1853224 Rhodothermales 0.00 1 0 F 563843 Rhodothermaceae 0.00 1 0 G 29548 Rhodothermus 0.00 1 1 S 29549 Rhodothermus marinus 0.00 1 0 F 1853225 Salinibacteraceae 0.00 1 0 G 146918 Salinibacter 0.00 1 1 S 146919 Salinibacter ruber 0.00 7 0 P 1090 Chlorobiota 0.00 7 0 C 191410 Chlorobiia 0.00 7 3 O 191411 Chlorobiales 0.00 3 0 F 2968741 Chloroherpetonaceae 0.00 3 0 G 100715 Chloroherpeton 0.00 3 0 S 100716 Chloroherpeton thalassium 0.00 3 3 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 1 F 191412 Chlorobiaceae 0.00 2 0 P 142182 Gemmatimonadota 0.00 2 0 C 219685 Gemmatimonadia 0.00 2 0 O 219686 Gemmatimonadales 0.00 2 0 F 219687 Gemmatimonadaceae 0.00 2 0 G 173479 Gemmatimonas 0.00 2 2 S 1379270 Gemmatimonas phototrophica 0.69 1258 0 P 29547 Campylobacterota 0.69 1258 0 C 3031852 Epsilonproteobacteria 0.69 1258 4 O 213849 Campylobacterales 0.67 1230 0 F 72294 Campylobacteraceae 0.67 1230 800 G 194 Campylobacter 0.09 161 161 S 824 Campylobacter gracilis 0.07 123 123 S 199 Campylobacter concisus 0.03 62 16 G1 2593542 unclassified Campylobacter 0.01 27 27 S 2840180 Campylobacter sp. 19-13652 0.01 19 19 S 1660080 Campylobacter sp. RM16192 0.01 22 22 S 1780362 Campylobacter geochelonis 0.01 19 19 S 197 Campylobacter jejuni 0.00 8 8 S 200 Campylobacter curvus 0.00 7 0 S 522485 Campylobacter avium 0.00 7 7 S1 522484 Campylobacter avium LMG 24591 0.00 6 6 S 206 Campylobacter sputorum 0.00 6 6 S 76517 Campylobacter hominis 0.00 5 5 S 2042961 Campylobacter blaseri 0.00 3 3 S 1244531 Campylobacter iguaniorum 0.00 3 3 S 1813019 Campylobacter hepaticus 0.00 2 2 S 449520 Campylobacter canadensis 0.00 1 1 S 827 Campylobacter ureolyticus 0.00 1 1 S 2267891 Campylobacter novaezeelandiae 0.00 1 0 S 198 Campylobacter hyointestinalis 0.00 1 0 S1 91353 Campylobacter hyointestinalis subsp. lawsonii 0.00 1 1 S2 1031752 Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 0.01 18 0 F 2932623 Sulfurospirillaceae 0.01 18 0 G 57665 Sulfurospirillum 0.01 18 0 S 66821 Sulfurospirillum multivorans 0.01 18 18 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 2 0 F 72293 Helicobacteraceae 0.00 2 0 G 209 Helicobacter 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 1 S 210 Helicobacter pylori 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 202746 Sulfurimonas 0.00 2 2 S 2672570 Sulfurimonas aquatica 0.00 1 0 F 2771472 Sulfurovaceae 0.00 1 0 G 269260 Nitratifractor 0.00 1 0 S 269261 Nitratifractor salsuginis 0.00 1 1 S1 749222 Nitratifractor salsuginis DSM 16511 0.00 1 1 F 2808963 Arcobacteraceae 0.44 803 1 D1 1783257 PVC group 0.39 713 0 P 203682 Planctomycetota 0.38 700 23 C 203683 Planctomycetia 0.36 663 0 O 112 Planctomycetales 0.36 663 9 F 126 Planctomycetaceae 0.35 646 10 G 1649453 Gimesia 0.35 636 636 S 2527964 Gimesia aquarii 0.00 4 0 G 2795780 Symmachiella 0.00 4 4 S 2527995 Symmachiella dynata 0.00 2 0 G 118 Planctomyces 0.00 2 0 G1 2648843 unclassified Planctomyces 0.00 1 1 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 S 1636152 Planctomyces sp. SH-PL62 0.00 1 0 G 2714592 Crateriforma 0.00 1 1 S 2527996 Crateriforma conspicua 0.00 1 0 G 2795774 Polystyrenella 0.00 1 1 S 2528007 Polystyrenella longa 0.00 9 0 O 2691354 Pirellulales 0.00 4 0 F 2691358 Thermoguttaceae 0.00 4 0 G 1676125 Thermogutta 0.00 4 4 S 1331910 Thermogutta terrifontis 0.00 3 2 F 2691359 Lacipirellulaceae 0.00 1 0 G 2795781 Aeoliella 0.00 1 1 S 2527972 Aeoliella mucimassa 0.00 2 0 F 2691357 Pirellulaceae 0.00 1 0 G 2005380 Mariniblastus 0.00 1 1 S 980251 Mariniblastus fucicola 0.00 1 1 G 2795973 Stieleria 0.00 5 0 O 2691356 Isosphaerales 0.00 5 3 F 1763524 Isosphaeraceae 0.00 1 0 G 466152 Singulisphaera 0.00 1 0 S 466153 Singulisphaera acidiphila 0.00 1 1 S1 886293 Singulisphaera acidiphila DSM 18658 0.00 1 0 G 1763521 Paludisphaera 0.00 1 1 S 1387353 Paludisphaera borealis 0.01 11 0 C 2897345 Candidatus Uabimicrobiia 0.01 11 0 O 2897347 Candidatus Uabimicrobiales 0.01 11 0 F 2897348 Candidatus Uabimicrobiaceae 0.01 11 0 G 2897349 Candidatus Uabimicrobium 0.01 11 11 S 2596890 Candidatus Uabimicrobium amorphum 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 1771349 Tepidisphaerales 0.00 1 0 F 1771355 Tepidisphaeraceae 0.00 1 0 G 2807511 Humisphaera 0.00 1 1 S 2807512 Humisphaera borealis 0.00 1 0 C 2517206 Candidatus Brocadiia 0.00 1 0 O 1127829 Candidatus Brocadiales 0.00 1 0 F 1127830 Candidatus Brocadiaceae 0.00 1 0 G 380738 Candidatus Kuenenia 0.00 1 1 S 174633 Candidatus Kuenenia stuttgartiensis 0.03 52 0 P 74201 Verrucomicrobiota 0.02 31 0 C 203494 Verrucomicrobiia 0.02 31 0 O 48461 Verrucomicrobiales 0.02 31 0 F 203557 Verrucomicrobiaceae 0.02 30 0 G 2735 Verrucomicrobium 0.02 30 0 G1 2625155 unclassified Verrucomicrobium 0.02 30 30 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 G 2911469 Sulfuriroseicoccus 0.00 1 1 S 2707525 Sulfuriroseicoccus oceanibius 0.01 12 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 12 0 G 1541670 Methylacidimicrobium 0.01 12 11 G1 2730358 unclassified Methylacidimicrobium 0.00 1 1 S 2796139 Methylacidimicrobium sp. B4 0.00 5 0 C 414999 Opitutia 0.00 4 1 O 415001 Puniceicoccales 0.00 2 0 O1 3056381 Puniceicoccales incertae sedis 0.00 2 0 G 3049269 Candidatus Pelagisphaera 0.00 2 2 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 F 3056374 Cerasicoccaceae 0.00 1 0 G 3138622 Rubellicoccus 0.00 1 1 S 3080537 Rubellicoccus peritrichatus 0.00 1 0 O 415000 Opitutales 0.00 1 1 F 134623 Opitutaceae 0.00 4 0 C 1955630 Methylacidiphilae 0.00 4 0 O 717963 Methylacidiphilales 0.00 4 0 F 717964 Methylacidiphilaceae 0.00 4 4 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.02 33 0 P 204428 Chlamydiota 0.02 33 26 C 204429 Chlamydiia 0.00 6 0 O 1963360 Parachlamydiales 0.00 3 0 F 689704 Candidatus Rhabdochlamydiaceae 0.00 3 0 G 292833 Candidatus Rhabdochlamydia 0.00 3 3 S 225148 Candidatus Rhabdochlamydia porcellionis 0.00 2 0 F 92712 Simkaniaceae 0.00 2 0 G 34093 Simkania 0.00 2 0 S 83561 Simkania negevensis 0.00 2 2 S1 331113 Simkania negevensis Z 0.00 1 0 F 92713 Parachlamydiaceae 0.00 1 0 G 282132 Candidatus Protochlamydia 0.00 1 1 S 389348 Candidatus Protochlamydia naegleriophila 0.00 1 0 O 51291 Chlamydiales 0.00 1 1 F 809 Chlamydiaceae 0.00 3 0 P 256845 Lentisphaerota 0.00 3 0 C 1313211 Lentisphaeria 0.00 3 0 O 278081 Lentisphaerales 0.00 3 0 F 566277 Lentisphaeraceae 0.00 3 0 G 256846 Lentisphaera 0.00 3 3 S 1658616 Lentisphaera profundi 0.00 1 0 P 134625 Kiritimatiellota 0.00 1 0 C 2907184 Tichowtungiia 0.00 1 0 O 2907185 Tichowtungiales 0.00 1 0 F 2907186 Tichowtungiaceae 0.00 1 0 G 2907187 Tichowtungia 0.00 1 1 S 2697043 Tichowtungia aerotolerans 0.26 474 0 D1 2323 Bacteria incertae sedis 0.26 474 0 D2 1783234 Bacteria candidate phyla 0.25 459 49 P 95818 Candidatus Saccharibacteria 0.19 352 2 C 2093818 Candidatus Saccharimonadia 0.16 295 0 O 2093819 Candidatus Nanosynbacterales 0.16 295 0 F 2093822 Candidatus Nanosynbacteraceae 0.16 295 195 G 2093823 Candidatus Nanosynbacter 0.05 100 100 S 2093824 Candidatus Nanosynbacter lyticus 0.03 55 0 O 2093825 Candidatus Saccharimonadales 0.03 55 0 F 2171986 Candidatus Saccharimonadaceae 0.03 55 0 G 1331051 Candidatus Saccharimonas 0.03 55 55 S 1332188 Candidatus Saccharimonas aalborgensis 0.03 56 0 G 2831665 Candidatus Mycosynbacter 0.03 56 56 S 2665156 Candidatus Mycosynbacter amalyticus 0.00 2 0 G 2905967 Candidatus Minimicrobia 0.00 2 2 S 2841264 Candidatus Minimicrobia vallesae 0.01 13 0 D3 95901 Candidatus Dependentiae 0.01 13 0 C 2497643 Candidatus Babeliae 0.01 13 0 O 2497644 Candidatus Babeliales 0.01 13 0 F 2953756 Candidatus Chromulinivoraceae 0.01 13 0 G 2953757 Candidatus Chromulinivorax 0.01 13 13 S 2066483 Candidatus Chromulinivorax destructor 0.00 2 0 P 1383058 Candidatus Fervidibacterota 0.00 2 0 G 1448928 Candidatus Fervidibacter 0.00 2 2 S 1448929 Candidatus Fervidibacter sacchari 0.21 376 3 P 200940 Thermodesulfobacteriota 0.19 350 0 C 3031651 Desulfuromonadia 0.19 343 0 O 69541 Desulfuromonadales 0.18 334 0 F 213421 Desulfuromonadaceae 0.18 334 327 G 890 Desulfuromonas 0.00 7 7 S 1603606 Desulfuromonas soudanensis 0.00 6 0 F 2812024 Syntrophotaleaceae 0.00 6 0 G 2812025 Syntrophotalea 0.00 6 0 S 19 Syntrophotalea carbinolica 0.00 6 6 S1 338963 Syntrophotalea carbinolica DSM 2380 0.00 3 0 F 3031659 Geopsychrobacteraceae 0.00 3 0 G 37817 Desulfuromusa 0.00 3 0 G1 97902 environmental samples 0.00 3 3 S 219183 uncultured Desulfuromusa sp. 0.00 7 0 O 3031668 Geobacterales 0.00 7 4 F 213422 Geobacteraceae 0.00 3 0 G 28231 Geobacter 0.00 3 0 G1 2627627 unclassified Geobacter 0.00 3 3 S 2597769 Geobacter sp. FeAm09 0.01 16 0 C 67799 Thermodesulfobacteria 0.01 16 12 O 188710 Thermodesulfobacteriales 0.00 4 0 F 188711 Thermodesulfobacteriaceae 0.00 4 0 G 2033601 Thermosulfuriphilus 0.00 4 4 S 1936021 Thermosulfuriphilus ammonigenes 0.00 3 0 C 3031449 Desulfovibrionia 0.00 3 0 O 213115 Desulfovibrionales 0.00 3 1 F 194924 Desulfovibrionaceae 0.00 2 2 G 2035811 Pseudodesulfovibrio 0.00 2 0 C 3031646 Desulfarculia 0.00 2 0 O 453227 Desulfarculales 0.00 2 0 F 453228 Desulfarculaceae 0.00 2 0 G 453229 Desulfarculus 0.00 2 0 S 453230 Desulfarculus baarsii 0.00 2 2 S1 644282 Desulfarculus baarsii DSM 2075 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 1 G 2289 Desulfobacter 0.00 1 0 C 3031451 Desulfobulbia 0.00 1 0 O 3024411 Desulfobulbales 0.00 1 0 F 213121 Desulfobulbaceae 0.00 1 0 G 3003266 Desulfolithobacter 0.00 1 1 S 2795293 Desulfolithobacter dissulfuricans 0.02 40 0 P 203691 Spirochaetota 0.02 40 0 C 203692 Spirochaetia 0.02 38 0 O 136 Spirochaetales 0.02 36 0 F 2845253 Treponemataceae 0.02 36 5 G 157 Treponema 0.01 21 0 G1 2638727 unclassified Treponema 0.01 21 21 S 2766701 Treponema sp. Marseille-Q4132 0.00 4 4 S 69710 Treponema vincentii 0.00 3 0 S 53419 Treponema socranskii 0.00 3 3 S1 69713 Treponema socranskii subsp. buccale 0.00 1 1 S 2787628 Treponema peruense 0.00 1 0 S 88058 Treponema primitia 0.00 1 1 S1 545694 Treponema primitia ZAS-2 0.00 1 1 S 165 Treponema saccharophilum 0.00 2 0 F 1643685 Borreliaceae 0.00 2 0 G 64895 Borreliella 0.00 2 2 S 100177 Borreliella lusitaniae 0.00 2 0 O 1643688 Leptospirales 0.00 2 0 F 170 Leptospiraceae 0.00 2 1 G 171 Leptospira 0.00 1 0 G1 2633828 unclassified Leptospira 0.00 1 1 S 1513297 Leptospira sp. GIMC2001 0.01 23 0 P 2818505 Myxococcota 0.01 23 0 P1 3031711 Polyangia 0.01 23 0 O 3031712 Polyangiales 0.01 21 0 F 1524216 Labilitrichaceae 0.01 21 0 G 1524217 Labilithrix 0.01 21 21 S 1391654 Labilithrix luteola 0.00 1 0 F 49 Polyangiaceae 0.00 1 0 G 39643 Sorangium 0.00 1 1 S 56 Sorangium cellulosum 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.01 10 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 10 0 P 1293497 Nitrospinota 0.01 10 0 C 1293498 Nitrospinia 0.01 10 0 O 1293499 Nitrospinales 0.01 10 0 F 407032 Nitrospinaceae 0.01 10 0 G 35800 Nitrospina 0.01 10 10 S 1323948 Nitrospina watsonii 0.00 8 0 P 57723 Acidobacteriota 0.00 6 0 C 533205 Holophagae 0.00 5 0 O 574975 Holophagales 0.00 5 0 F 574976 Holophagaceae 0.00 5 5 G 44675 Geothrix 0.00 1 0 O 2562243 Thermotomaculales 0.00 1 0 F 2562244 Thermotomaculaceae 0.00 1 0 G 1172428 Thermotomaculum 0.00 1 1 S 981385 Thermotomaculum hydrothermale 0.00 2 0 C 204432 Terriglobia 0.00 2 0 O 204433 Terriglobales 0.00 2 1 F 204434 Acidobacteriaceae 0.00 1 1 G 940557 Granulicella 0.00 7 0 P 508458 Synergistota 0.00 7 0 C 649775 Synergistia 0.00 7 1 O 649776 Synergistales 0.00 5 0 F 3029088 Dethiosulfovibrionaceae 0.00 5 0 G 428711 Jonquetella 0.00 5 0 S 428712 Jonquetella anthropi 0.00 5 5 S1 885272 Jonquetella anthropi DSM 22815 0.00 1 0 F 649777 Synergistaceae 0.00 1 0 G 81411 Aminomonas 0.00 1 0 S 81412 Aminomonas paucivorans 0.00 1 1 S1 584708 Aminomonas paucivorans DSM 12260 0.00 5 0 P 3018035 Bdellovibrionota 0.00 4 0 C 3031419 Bacteriovoracia 0.00 4 0 O 2024979 Bacteriovoracales 0.00 3 0 F 263369 Bacteriovoracaceae 0.00 3 0 G 146784 Bacteriovorax 0.00 3 3 S 960 Bacteriovorax stolpii 0.00 1 0 F 1652132 Halobacteriovoraceae 0.00 1 0 G 1652133 Halobacteriovorax 0.00 1 0 G1 2639665 unclassified Halobacteriovorax 0.00 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 0 G 2862745 Pseudobdellovibrio 0.00 1 0 S 453816 Pseudobdellovibrio exovorus 0.00 1 1 S1 1184267 Pseudobdellovibrio exovorus JSS 0.00 3 0 D1 2498710 Caldisericota/Cryosericota group 0.00 3 0 P 67814 Caldisericota 0.00 3 0 C 693071 Caldisericia 0.00 3 0 O 693072 Caldisericales 0.00 3 0 F 693073 Caldisericaceae 0.00 3 0 G 693074 Caldisericum 0.00 3 0 S 693075 Caldisericum exile 0.00 3 3 S1 511051 Caldisericum exile AZM16c01 0.00 2 0 P 74152 Elusimicrobiota 0.00 1 0 C 447830 Endomicrobiia 0.00 1 0 O 1783344 Endomicrobiales 0.00 1 0 F 1783343 Endomicrobiaceae 0.00 1 0 G 1408194 Endomicrobium 0.00 1 1 S 1408204 Candidatus Endomicrobium trichonymphae 0.00 1 0 C 641853 Elusimicrobia 0.00 1 0 O 641854 Elusimicrobiales 0.00 1 0 F 641876 Elusimicrobiaceae 0.00 1 0 G 423604 Elusimicrobium 0.00 1 0 S 423605 Elusimicrobium minutum 0.00 1 1 S1 445932 Elusimicrobium minutum Pei191 0.00 2 0 P 200783 Aquificota 0.00 2 0 C 187857 Aquificia 0.00 2 0 O 32069 Aquificales 0.00 2 0 F 224027 Hydrogenothermaceae 0.00 2 2 G 212790 Sulfurihydrogenibium 0.00 2 0 P 200918 Thermotogota 0.00 2 0 C 188708 Thermotogae 0.00 2 0 O 1643946 Kosmotogales 0.00 2 0 F 1643948 Kosmotogaceae 0.00 2 0 G 651456 Kosmotoga 0.00 2 2 S 1330330 Kosmotoga pacifica 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 0 O 191393 Deferribacterales 0.00 2 0 F 2945021 Calditerrivibrionaceae 0.00 2 0 G 545865 Calditerrivibrio 0.00 2 0 S 477976 Calditerrivibrio nitroreducens 0.00 2 2 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 P 200938 Chrysiogenota 0.00 1 0 C 118001 Chrysiogenia 0.00 1 0 O 189769 Chrysiogenales 0.00 1 0 F 189770 Chrysiogenaceae 0.00 1 0 G 393029 Desulfurispirillum 0.00 1 1 S 936456 Desulfurispirillum indicum 0.00 2 0 D 2157 Archaea 0.00 2 0 D1 1783275 TACK group 0.00 2 0 P 28889 Thermoproteota 0.00 2 0 C 183924 Thermoprotei 0.00 2 0 O 2281 Sulfolobales 0.00 2 0 F 118883 Sulfolobaceae 0.00 2 0 G 12914 Acidianus 0.00 2 2 S 282676 Acidianus manzaensis 0.00 8 0 D 10239 Viruses 0.00 6 0 C 2840056 Naldaviricetes 0.00 6 0 O 2840070 Lefavirales 0.00 6 0 F 10442 Baculoviridae 0.00 6 0 G 558017 Betabaculovirus 0.00 6 0 S 3051997 Betabaculovirus chofumiferanae 0.00 6 6 S1 56947 Choristoneura fumiferana granulovirus 0.00 2 0 D1 2731341 Duplodnaviria 0.00 2 0 K 2731360 Heunggongvirae 0.00 2 0 P 2731618 Uroviricota 0.00 2 0 C 2731619 Caudoviricetes 0.00 2 0 G 186789 Punavirus 0.00 2 0 S 10678 Punavirus P1 0.00 2 2 S1 2886926 Escherichia phage P1