25.71 27689 27689 U 0 unclassified 74.29 80012 2 R 1 root 74.26 79983 0 R1 131567 cellular organisms 74.26 79975 3373 D 2 Bacteria 59.55 64132 574 P 1224 Pseudomonadota 29.41 31675 533 C 1236 Gammaproteobacteria 26.02 28021 0 O 135614 Lysobacterales 26.02 28020 1 F 32033 Lysobacteraceae 26.01 28018 2 G 338 Xanthomonas 26.01 28016 28016 S 29447 Xanthomonas albilineans 0.00 1 1 G 40323 Stenotrophomonas 0.00 1 0 F 1775411 Rhodanobacteraceae 0.00 1 0 G 75309 Rhodanobacter 0.00 1 1 S 666685 Rhodanobacter denitrificans 2.11 2277 145 O 91347 Enterobacterales 1.53 1653 373 F 543 Enterobacteriaceae 0.34 370 1 F1 2890311 Klebsiella/Raoultella group 0.34 367 22 G 570 Klebsiella 0.23 246 200 S 573 Klebsiella pneumoniae 0.04 46 46 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.05 56 56 S 548 Klebsiella aerogenes 0.02 19 15 S 1463165 Klebsiella quasipneumoniae 0.00 4 4 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 12 10 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S1 2590157 Klebsiella variicola subsp. variicola 0.01 6 6 S 1134687 Klebsiella michiganensis 0.01 6 0 G1 2608929 unclassified Klebsiella 0.00 5 5 S 2829835 Klebsiella sp. P1954 0.00 1 1 S 1905288 Klebsiella sp. LTGPAF-6F 0.00 2 0 G 160674 Raoultella 0.00 1 1 S 575 Raoultella planticola 0.00 1 0 G1 2627600 unclassified Raoultella 0.00 1 1 S 2799495 Raoultella sp. XY-1 0.26 275 1 G 561 Escherichia 0.25 268 225 S 562 Escherichia coli 0.03 28 28 S1 1322345 Escherichia coli ATCC 25922 0.01 8 8 S1 316435 Escherichia coli Nissle 1917 0.00 4 4 S1 1446600 Escherichia coli O15:H18 0.00 3 3 S1 2079157 Escherichia coli O2:H1 0.00 5 5 S 208962 Escherichia albertii 0.00 1 1 S 1499973 Escherichia marmotae 0.19 210 1 G 547 Enterobacter 0.19 200 0 G1 354276 Enterobacter cloacae complex 0.16 174 174 S 299767 Enterobacter ludwigii 0.02 22 22 S 158836 Enterobacter hormaechei 0.00 2 2 S 208224 Enterobacter kobei 0.00 1 0 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 1 S 61645 Enterobacter asburiae 0.01 7 7 S 881260 Enterobacter bugandensis 0.00 2 0 G1 2608935 unclassified Enterobacter 0.00 2 2 S 2724468 Enterobacter sp. JUb54 0.19 207 2 G 590 Salmonella 0.19 202 12 S 28901 Salmonella enterica 0.18 190 8 S1 59201 Salmonella enterica subsp. enterica 0.04 41 41 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.03 34 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.02 19 19 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 13 13 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 2 2 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.03 32 32 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.02 22 22 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.02 17 16 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 1 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.01 10 7 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 3 3 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 8 8 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 4 4 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 3 3 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 3 3 S2 28147 Salmonella enterica subsp. enterica serovar Oranienburg 0.00 2 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 2 2 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 2 2 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 3 2 S 54736 Salmonella bongori 0.00 1 1 S1 2577118 Salmonella bongori serovar 48:z81:- 0.12 133 1 G 1330547 Kosakonia 0.12 132 132 S 208223 Kosakonia cowanii 0.02 22 0 G 1903434 Atlantibacter 0.02 22 22 S 565 Atlantibacter hermannii 0.02 20 7 F1 36866 unclassified Enterobacteriaceae 0.01 12 12 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 1 1 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.01 15 0 F1 191675 Enterobacteriaceae incertae sedis 0.01 15 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 9 0 F3 84564 ant endosymbionts 0.01 7 0 G 203804 Candidatus Blochmanniella 0.00 4 3 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 2 2 S 251538 Candidatus Blochmannia ocreatus 0.00 1 1 S 101534 Candidatus Blochmanniella pennsylvanica 0.00 2 0 G 1699619 Candidatus Westeberhardia 0.00 2 2 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 3 0 G 1302410 Candidatus Annandia 0.00 3 3 S 1302411 Candidatus Annandia adelgestsuga 0.00 2 0 F3 146507 aphid secondary symbionts 0.00 2 2 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.01 6 0 G 2303321 Superficieibacter 0.01 6 0 G1 2645744 unclassified Superficieibacter 0.01 6 6 S 3031919 Superficieibacter sp. HKU1 0.00 5 1 G 544 Citrobacter 0.00 3 0 G1 1344959 Citrobacter freundii complex 0.00 1 1 S 546 Citrobacter freundii 0.00 1 1 S 57706 Citrobacter braakii 0.00 1 1 S 67828 Citrobacter gillenii 0.00 1 1 S 2971264 Citrobacter enshiensis 0.00 4 0 G 82976 Buttiauxella 0.00 4 0 G1 2634062 unclassified Buttiauxella 0.00 4 4 S 2986951 Buttiauxella sp. WJP83 0.00 3 0 G 620 Shigella 0.00 2 2 S 623 Shigella flexneri 0.00 1 1 S 621 Shigella boydii 0.00 3 0 G 1177214 Candidatus Profftia 0.00 2 0 G1 2735709 unclassified Candidatus Profftia 0.00 2 2 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.00 2 1 G 83654 Leclercia 0.00 1 1 S 83655 Leclercia adecarboxylata 0.00 1 0 G 158876 Yokenella 0.00 1 1 S 158877 Yokenella regensburgei 0.00 1 1 G 401618 Candidatus Riesia 0.00 1 0 G 2815296 Jejubacter 0.00 1 1 S 2579935 Jejubacter calystegiae 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 1504576 Pseudocitrobacter 0.00 1 1 S 2891570 Pseudocitrobacter corydidari 0.17 182 20 F 1903409 Erwiniaceae 0.10 113 68 G 53335 Pantoea 0.02 20 20 S 553 Pantoea ananatis 0.02 17 0 G1 1654067 Pantoea agglomerans group 0.02 17 17 S 549 Pantoea agglomerans 0.00 4 4 S 66269 Pantoea stewartii 0.00 2 2 S 470934 Pantoea vagans 0.00 1 1 S 470931 Pantoea anthophila 0.00 1 0 G1 2630326 unclassified Pantoea 0.00 1 1 S 592316 Pantoea sp. At-9b 0.03 37 0 G 551 Erwinia 0.02 26 26 S 1922217 Candidatus Erwinia haradaeae 0.01 6 6 S 55211 Erwinia persicina 0.00 5 0 G1 2622719 unclassified Erwinia 0.00 4 4 S 2675378 Erwinia sp. E602 0.00 1 1 S 215689 Erwinia sp. Ejp617 0.01 6 0 G 3026546 Duffyella 0.01 6 6 S 1619313 Duffyella gerundensis 0.00 3 0 G 32199 Buchnera 0.00 3 1 S 9 Buchnera aphidicola 0.00 2 2 S1 1241833 Buchnera aphidicola (Anoecia oenotherae) 0.00 3 0 G 2100764 Mixta 0.00 2 2 S 665914 Mixta gaviniae 0.00 1 1 S 1615494 Mixta intestinalis 0.13 138 0 F 1903411 Yersiniaceae 0.12 125 1 G 613 Serratia 0.11 122 122 S 138074 Serratia symbiotica 0.00 2 2 S 61652 Serratia rubidaea 0.01 7 7 G 1927833 Candidatus Fukatsuia 0.00 2 0 G 629 Yersinia 0.00 2 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 2 0 S 632 Yersinia pestis 0.00 2 2 S1 748678 Yersinia pestis str. Pestoides B 0.00 2 0 G 1745211 Chania 0.00 2 0 S 1639108 Chania multitudinisentens 0.00 2 2 S1 1441930 Chania multitudinisentens RB-25 0.00 1 0 G 34037 Rahnella 0.00 1 1 S 58169 Rahnella inusitata 0.00 1 0 G 1565532 Rouxiella 0.00 1 1 S 1646377 Rouxiella badensis 0.10 109 0 F 2812006 Bruguierivoracaceae 0.10 109 1 G 84565 Sodalis 0.10 105 105 S 2697027 Sodalis ligni 0.00 2 0 S 1486991 Candidatus Sodalis pierantonius 0.00 2 2 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 1 S 1239307 Sodalis praecaptivus 0.03 29 14 F 1903410 Pectobacteriaceae 0.01 8 0 G 122277 Pectobacterium 0.00 4 4 S 2485124 Pectobacterium polonicum 0.00 4 4 S 1905730 Pectobacterium parmentieri 0.01 7 0 G 204037 Dickeya 0.01 6 6 S 1089444 Dickeya solani 0.00 1 1 S 204038 Dickeya dadantii 0.02 19 1 F 1903414 Morganellaceae 0.01 10 0 G 581 Morganella 0.01 10 10 S 582 Morganella morganii 0.00 4 0 G 583 Proteus 0.00 4 4 S 584 Proteus mirabilis 0.00 4 1 G 637 Arsenophonus 0.00 1 1 S 638 Arsenophonus nasoniae 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.00 1 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 3041619 Arsenophonus sp. aPb 0.00 2 0 F 3120698 Gallaecimonadaceae 0.00 2 0 G 745410 Gallaecimonas 0.00 2 2 S 3029055 Gallaecimonas kandeliae 0.12 131 1 O 72274 Pseudomonadales 0.12 130 3 F 135621 Pseudomonadaceae 0.11 114 64 G 286 Pseudomonas 0.01 13 0 G1 136845 Pseudomonas putida group 0.01 7 6 S 303 Pseudomonas putida 0.00 1 1 S1 1196325 Pseudomonas putida DOT-T1E 0.01 6 6 S 78327 Pseudomonas mosselii 0.01 11 1 G1 196821 unclassified Pseudomonas 0.00 2 2 S 3137451 Pseudomonas sp. G.S.17 0.00 2 2 S 2954092 Pseudomonas sp. FP2335 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 3139142 Pseudomonas sp. RC10 0.00 1 1 S 2604941 Pseudomonas sp. C27(2019) 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2705472 Pseudomonas sp. MTM4 0.00 1 1 S 1649877 Pseudomonas sp. CCOS 191 0.01 10 0 G1 136843 Pseudomonas fluorescens group 0.01 10 0 S 47883 Pseudomonas synxantha 0.01 10 10 S1 96901 Pseudomonas synxantha BG33R 0.01 9 0 G1 136841 Pseudomonas aeruginosa group 0.01 9 9 S 287 Pseudomonas aeruginosa 0.00 4 4 S 2738125 Pseudomonas hefeiensis 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 157783 Pseudomonas cremoricolorata 0.00 1 0 G1 136849 Pseudomonas syringae group 0.00 1 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 1 0 S 317 Pseudomonas syringae 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.01 10 0 G 2901164 Stutzerimonas 0.01 10 0 G1 136846 Stutzerimonas stutzeri group 0.01 10 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 10 10 S 316 Stutzerimonas stutzeri 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.11 122 0 O 1240482 Orbales 0.11 122 1 F 1240483 Orbaceae 0.11 121 0 G 2894762 Zophobihabitans 0.11 121 121 S 1635327 Zophobihabitans entericus 0.09 99 0 O 2887326 Moraxellales 0.09 99 1 F 468 Moraxellaceae 0.09 97 5 G 469 Acinetobacter 0.03 33 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.03 29 28 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.00 4 0 S 48296 Acinetobacter pittii 0.00 4 4 S1 871585 Acinetobacter pittii PHEA-2 0.03 28 0 S 52133 Acinetobacter venetianus 0.03 28 28 S1 1197884 Acinetobacter venetianus VE-C3 0.01 11 11 S 40214 Acinetobacter johnsonii 0.01 10 10 S 202956 Acinetobacter towneri 0.01 9 9 S 756892 Acinetobacter indicus 0.00 1 1 S 106648 Acinetobacter bereziniae 0.00 1 0 G 497 Psychrobacter 0.00 1 0 G1 196806 unclassified Psychrobacter 0.00 1 1 S 1415574 Psychrobacter sp. LV10R520-6 0.08 87 0 O 135615 Cardiobacteriales 0.08 86 0 F 868 Cardiobacteriaceae 0.08 81 0 G 13275 Suttonella 0.08 81 0 G1 2908647 unclassified Suttonella 0.08 81 81 S 2908648 Suttonella sp. R2A3 0.00 5 0 G 869 Dichelobacter 0.00 5 5 S 870 Dichelobacter nodosus 0.00 1 0 F 3018589 Ignatzschineriaceae 0.00 1 0 G 112008 Ignatzschineria 0.00 1 1 S 2923279 Ignatzschineria rhizosphaerae 0.08 85 2 O 135619 Oceanospirillales 0.05 55 2 F 135620 Oceanospirillaceae 0.04 44 0 G 267849 Nitrincola 0.04 44 44 S 2614693 Nitrincola iocasae 0.01 7 0 G 28253 Marinomonas 0.00 5 5 S 2773454 Marinomonas algicola 0.00 1 1 S 119864 Marinomonas mediterranea 0.00 1 1 G1 196814 unclassified Marinomonas 0.00 1 0 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 0 G 3018276 Aliamphritea 0.00 1 1 S 1524258 Aliamphritea ceti 0.01 16 0 F 28256 Halomonadaceae 0.01 9 0 G 2745 Halomonas 0.01 8 8 S 3031727 Halomonas piscis 0.00 1 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2982692 Halomonas sp. M4R1S46 0.01 7 0 F1 114403 Zymobacter group 0.00 4 0 G 114185 Candidatus Carsonella 0.00 4 2 S 114186 Candidatus Carsonella ruddii 0.00 2 2 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.00 3 0 G 235572 Candidatus Portiera 0.00 3 3 S 91844 Candidatus Portiera aleyrodidarum 0.01 10 0 F 2823145 Pleioneaceae 0.01 10 0 G 1502941 Pleionea 0.01 10 10 S 3070815 Pleionea litopenaei 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 0 G 3020833 Isoalcanivorax 0.00 1 0 S 1306787 Isoalcanivorax pacificus 0.00 1 1 S1 391936 Isoalcanivorax pacificus W11-5 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.07 72 0 O 135623 Vibrionales 0.07 72 37 F 641 Vibrionaceae 0.02 22 9 G 662 Vibrio 0.00 4 0 S 52443 Vibrio tapetis 0.00 4 4 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 4 0 G1 717610 Vibrio harveyi group 0.00 3 3 S 669 Vibrio harveyi 0.00 1 1 S 670 Vibrio parahaemolyticus 0.00 3 3 S 666 Vibrio cholerae 0.00 2 0 G1 2614977 unclassified Vibrio 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.01 8 3 G 657 Photobacterium 0.00 4 3 S 553611 Photobacterium leiognathi 0.00 1 1 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 1 0 G1 2628852 unclassified Photobacterium 0.00 1 1 S 2912855 Photobacterium sp. CCB-ST2H9 0.00 5 0 G 511678 Aliivibrio 0.00 3 0 S 668 Aliivibrio fischeri 0.00 3 3 S1 1088719 Aliivibrio fischeri SR5 0.00 2 0 S 40269 Aliivibrio salmonicida 0.00 2 2 S1 316275 Aliivibrio salmonicida LFI1238 0.04 48 0 O 135618 Methylococcales 0.04 48 6 F 403 Methylococcaceae 0.03 35 0 G 39773 Methylomicrobium 0.03 35 0 S 39775 Methylomicrobium album 0.03 35 35 S1 686340 Methylomicrobium album BG8 0.00 4 0 G 762296 Methylovulum 0.00 4 4 S 1704499 Methylovulum psychrotolerans 0.00 2 2 G 416 Methylomonas 0.00 1 0 G 1295378 Methylogaea 0.00 1 1 S 1295382 Methylogaea oryzae 0.04 46 0 O 135625 Pasteurellales 0.04 46 4 F 712 Pasteurellaceae 0.03 33 2 G 724 Haemophilus 0.02 25 25 S 727 Haemophilus influenzae 0.00 4 4 S 729 Haemophilus parainfluenzae 0.00 2 2 S 735 Haemophilus parahaemolyticus 0.00 4 0 G 2094023 Glaesserella 0.00 4 0 G1 2629322 unclassified Glaesserella 0.00 4 4 S 2030797 Glaesserella sp. 15-184 0.00 2 0 G 713 Actinobacillus 0.00 2 0 S 718 Actinobacillus equuli 0.00 2 2 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 0 G 214906 Histophilus 0.00 2 2 S 731 Histophilus somni 0.00 1 0 G 292486 Avibacterium 0.00 1 1 S 728 Avibacterium paragallinarum 0.04 45 1 O 135622 Alteromonadales 0.03 35 0 F 267888 Pseudoalteromonadaceae 0.03 32 0 G 2834759 Flocculibacter 0.03 32 32 S 2744479 Flocculibacter collagenilyticus 0.00 3 2 G 53246 Pseudoalteromonas 0.00 1 0 G1 194690 unclassified Pseudoalteromonas 0.00 1 1 S 649161 Pseudoalteromonas sp. 3J6 0.01 6 0 F 267890 Shewanellaceae 0.01 6 1 G 22 Shewanella 0.00 3 2 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 2 2 S 62322 Shewanella baltica 0.00 2 2 F 72275 Alteromonadaceae 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 0 S 90736 Moritella marina 0.00 1 1 S1 1202962 Moritella marina ATCC 15381 0.02 23 0 O 2975284 Candidatus Comchoanobacterales 0.02 23 0 F 2975285 Candidatus Comchoanobacteraceae 0.02 23 0 G 2975286 Candidatus Comchoanobacter 0.02 23 23 S 2919598 Candidatus Comchoanobacter bicostacola 0.02 20 0 O 72273 Thiotrichales 0.01 10 0 F 135617 Thiotrichaceae 0.01 10 10 G 1030 Thiothrix 0.00 5 0 F 2056687 Fastidiosibacteraceae 0.00 5 0 G 2056696 Cysteiniphilum 0.00 5 0 G1 2610889 unclassified Cysteiniphilum 0.00 5 5 S 2975055 Cysteiniphilum sp. QT6929 0.00 3 1 F 34064 Francisellaceae 0.00 2 2 G 262 Francisella 0.00 2 0 F 135616 Piscirickettsiaceae 0.00 1 1 G 933 Thiomicrospira 0.00 1 1 G 34067 Cycloclasticus 0.02 19 0 O 135613 Chromatiales 0.01 13 1 F 1046 Chromatiaceae 0.01 9 9 G 1056 Thiocapsa 0.00 1 1 G 1227 Nitrosococcus 0.00 1 0 G 67575 Rheinheimera 0.00 1 0 G1 115860 unclassified Rheinheimera 0.00 1 1 S 3072790 Rheinheimera sp. MMS21-TC3 0.00 1 0 G 2796146 Candidatus Nitrosacidococcus 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 5 0 F 72276 Ectothiorhodospiraceae 0.00 3 0 G 106633 Thioalkalivibrio 0.00 3 3 S 106634 Thioalkalivibrio versutus 0.00 1 0 G 406099 Aquisalimonas 0.00 1 0 G1 2644645 unclassified Aquisalimonas 0.00 1 1 S 2740807 Aquisalimonas sp. 2447 0.00 1 0 G 1335745 Spiribacter 0.00 1 0 S 1335746 Spiribacter salinus 0.00 1 1 S1 1260251 Spiribacter salinus M19-40 0.00 1 0 F 255526 Halothiobacillaceae 0.00 1 1 G 109262 Halothiobacillus 0.01 16 0 O 135624 Aeromonadales 0.01 15 0 F 84642 Aeromonadaceae 0.01 11 0 G 43947 Tolumonas 0.01 11 0 G1 263764 environmental samples 0.01 11 11 S 263765 uncultured Tolumonas sp. 0.00 3 0 G 642 Aeromonas 0.00 2 2 S 654 Aeromonas veronii 0.00 1 0 G1 257493 unclassified Aeromonas 0.00 1 1 S 2920537 Aeromonas sp. 19NY04SH05-1 0.00 1 0 G 225143 Oceanisphaera 0.00 1 1 S 1903694 Oceanisphaera avium 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.01 12 0 O 118969 Legionellales 0.01 12 0 F 118968 Coxiellaceae 0.01 6 0 G 776 Coxiella 0.00 3 3 S 777 Coxiella burnetii 0.00 3 1 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 2 2 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 4 2 G 254245 Aquicella 0.00 2 2 S 254247 Aquicella siphonis 0.00 1 1 G 59195 Rickettsiella 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.01 9 0 O 1706369 Cellvibrionales 0.00 4 3 F 1706372 Halieaceae 0.00 1 0 G 3040948 Candidatus Paraluminiphilus 0.00 1 1 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 2 0 F 1706371 Cellvibrionaceae 0.00 2 2 G 2425 Teredinibacter 0.00 2 0 F 1706375 Spongiibacteraceae 0.00 1 1 G 630749 Spongiibacter 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 1516059 Microbulbifer sp. ALW1 0.01 8 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 5 0 C2 32036 sulfur-oxidizing symbionts 0.00 3 0 G 2686004 Candidatus Vondammii 0.00 3 0 G1 2687300 unclassified Candidatus Vondammii 0.00 3 3 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 2 2 S 2738852 Candidatus Ruthia endofausta 0.00 2 0 G 204619 Candidatus Nardonella 0.00 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 G 1076625 Candidatus Steffania 0.00 1 1 S 1076626 Candidatus Steffania adelgidicola 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 650377 endosymbiont of Euscepes postfasciatus 0.00 1 0 O 3060226 Steroidobacterales 0.00 1 0 F 2689614 Steroidobacteraceae 0.00 1 0 G 469322 Steroidobacter 0.00 1 1 S 465721 Steroidobacter denitrificans 29.41 31672 286 C 28211 Alphaproteobacteria 28.49 30680 68 O 204441 Rhodospirillales 28.23 30403 0 F 2844601 Stellaceae 28.23 30403 0 G 93 Stella 28.23 30403 30403 S 94 Stella humosa 0.17 178 1 F 433 Acetobacteraceae 0.16 168 0 G 512381 Acidisoma 0.16 168 0 G1 2634065 unclassified Acidisoma 0.16 168 168 S 3040935 Acidisoma sp. PAMC 29798 0.01 7 0 G 504465 Rhodovastum 0.01 7 7 S 504468 Rhodovastum atsumiense 0.00 1 0 G 441 Gluconobacter 0.00 1 1 S 257438 Gluconobacter thailandicus 0.00 1 0 G 3027666 Aristophania 0.00 1 1 S 2697033 Aristophania vespae 0.03 31 0 F 41295 Rhodospirillaceae 0.03 31 0 G 111830 Defluviicoccus 0.03 31 31 S 111831 Defluviicoccus vanus 0.51 546 0 O 204458 Caulobacterales 0.51 546 1 F 76892 Caulobacteraceae 0.50 543 0 G 41275 Brevundimonas 0.50 543 0 G1 2622653 unclassified Brevundimonas 0.50 543 543 S 2560058 Brevundimonas sp. Bb-A 0.00 2 0 G 20 Phenylobacterium 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 1 S 2201350 Phenylobacterium parvum 0.05 50 5 O 356 Hyphomicrobiales 0.02 22 3 F 119045 Methylobacteriaceae 0.02 17 16 G 407 Methylobacterium 0.00 1 0 S 31998 Methylobacterium radiotolerans 0.00 1 1 S1 426355 Methylobacterium radiotolerans JCM 2831 0.00 2 2 G 186650 Microvirga 0.01 11 0 F 82115 Rhizobiaceae 0.01 8 4 F1 227290 Rhizobium/Agrobacterium group 0.00 4 2 G 379 Rhizobium 0.00 1 0 S 384 Rhizobium leguminosarum 0.00 1 1 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 0 G1 2613769 unclassified Rhizobium 0.00 1 1 S 2775403 Rhizobium sp. TH2 0.00 3 3 G 34019 Liberibacter 0.00 4 0 F 255475 Aurantimonadaceae 0.00 4 4 G 414371 Aureimonas 0.00 3 0 F 2831106 Devosiaceae 0.00 2 0 G 3064792 Mariluticola 0.00 2 2 S 2909283 Mariluticola halotolerans 0.00 1 1 G 1082930 Pelagibacterium 0.00 1 0 F 41294 Nitrobacteraceae 0.00 1 0 G 374 Bradyrhizobium 0.00 1 1 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 F 2831100 Boseaceae 0.00 1 1 G 85413 Bosea 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 0 G 68287 Mesorhizobium 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2956824 Mesorhizobium sp. C120A 0.00 1 0 F 2685818 Amorphaceae 0.00 1 0 G 1904377 Acuticoccus 0.00 1 0 G1 2631034 unclassified Acuticoccus 0.00 1 1 S 2928472 Acuticoccus sp. I52.16.1 0.03 36 8 O 204455 Rhodobacterales 0.02 26 2 F 31989 Paracoccaceae 0.02 18 7 G 265 Paracoccus 0.01 11 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 9 9 S 2654280 Paracoccus sp. SMMA_5_TC 0.00 2 2 S 3030011 Paracoccus sp. S3-43 0.00 4 0 G 2831955 Pikeienuella 0.00 4 4 S 2748098 Pikeienuella piscinae 0.00 1 0 G 2818469 Fuscovulum 0.00 1 1 S 1075 Fuscovulum blasticum 0.00 1 0 G 2816884 Qingshengfaniella 0.00 1 1 S 2599296 Qingshengfaniella alkalisoli 0.00 2 0 F 2854170 Roseobacteraceae 0.00 1 0 G 2433 Roseobacter 0.00 1 0 S 42443 Roseobacter litoralis 0.00 1 1 S1 391595 Roseobacter litoralis Och 149 0.00 1 1 G 60136 Sulfitobacter 0.03 35 1 O 766 Rickettsiales 0.03 27 0 F 942 Anaplasmataceae 0.02 24 0 G 2883098 Candidatus Mesenet 0.02 24 24 G1 3066220 unclassified Candidatus Mesenet 0.00 2 0 F1 952 Wolbachieae 0.00 2 0 G 953 Wolbachia 0.00 2 1 G1 2640676 unclassified Wolbachia 0.00 1 1 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.00 1 1 G 33993 Neorickettsia 0.00 5 0 F 775 Rickettsiaceae 0.00 5 0 F1 33988 Rickettsieae 0.00 3 0 G 2601645 Candidatus Sneabacter 0.00 3 3 S 2601646 Candidatus Sneabacter namystus 0.00 2 0 G 780 Rickettsia 0.00 2 0 G1 114277 spotted fever group 0.00 2 0 S 781 Rickettsia conorii 0.00 2 2 S1 369822 Rickettsia conorii subsp. raoultii 0.00 2 0 F 1328881 Candidatus Midichloriaceae 0.00 2 1 G 2716172 Candidatus Bandiella 0.00 1 1 S 2570586 Candidatus Bandiella numerosa 0.02 24 10 O 204457 Sphingomonadales 0.01 12 1 F 41297 Sphingomonadaceae 0.01 9 5 G 13687 Sphingomonas 0.00 2 1 G1 196159 unclassified Sphingomonas 0.00 1 1 S 3114300 Sphingomonas sp. M1-B02 0.00 1 1 S 13689 Sphingomonas paucimobilis 0.00 1 1 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 G 165696 Novosphingobium 0.00 1 0 G 1763827 Hankyongella 0.00 1 1 S 1763828 Hankyongella ginsenosidimutans 0.00 1 1 F 335929 Erythrobacteraceae 0.00 1 0 F 2820280 Sphingosinicellaceae 0.00 1 1 G 1508451 Polymorphobacter 0.01 10 0 O 1921002 Holosporales 0.01 9 0 F 44746 Holosporaceae 0.01 9 0 G 2654634 Candidatus Hydrogenosomobacter 0.01 9 9 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 1 0 G 3163645 Candidatus Bodocaedibacter 0.00 1 1 S 2741701 Candidatus Bodocaedibacter vickermanii 0.00 4 0 O 2800059 Maricaulales 0.00 4 0 F 2800061 Maricaulaceae 0.00 4 0 G 74317 Maricaulis 0.00 4 4 S 74318 Maricaulis maris 0.00 1 0 C1 33807 unclassified Alphaproteobacteria 0.00 1 1 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.19 207 5 C 28216 Betaproteobacteria 0.17 187 5 O 80840 Burkholderiales 0.09 100 0 F 119060 Burkholderiaceae 0.06 69 0 G 48736 Ralstonia 0.06 69 0 G1 3116862 Ralstonia solanacearum species complex 0.06 69 69 S 305 Ralstonia solanacearum 0.03 27 0 G 32008 Burkholderia 0.03 27 0 G1 87882 Burkholderia cepacia complex 0.02 22 21 S 152500 Burkholderia dolosa 0.00 1 1 S1 1385930 Burkholderia dolosa PC543 0.00 5 5 S 87883 Burkholderia multivorans 0.00 2 0 G 47670 Lautropia 0.00 2 2 S 47671 Lautropia mirabilis 0.00 1 0 G 106589 Cupriavidus 0.00 1 1 S 164546 Cupriavidus taiwanensis 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 1 S 92647 Paraburkholderia tropica 0.06 67 6 F 75682 Oxalobacteraceae 0.03 29 1 G 401469 Undibacterium 0.03 28 5 G1 2630295 unclassified Undibacterium 0.02 23 23 S 3048609 Undibacterium sp. CCC3.4 0.02 17 3 F1 2895353 Telluria group 0.01 14 4 G 149698 Massilia 0.01 6 6 S 945844 Massilia oculi 0.00 2 2 S 457921 Massilia varians 0.00 2 0 G1 2609279 unclassified Massilia 0.00 1 1 S 2970464 Massilia sp. H6 0.00 1 1 S 3126507 Massilia sp. W12 0.01 13 9 G 29580 Janthinobacterium 0.00 4 0 G1 2610881 unclassified Janthinobacterium 0.00 2 2 S 2497863 Janthinobacterium sp. 17J80-10 0.00 2 2 S 3065910 Janthinobacterium sp. J1-1 0.00 1 0 G 1229970 Glaciimonas 0.00 1 0 G1 2644401 unclassified Glaciimonas 0.00 1 1 S 2807626 Glaciimonas sp. PAMC28666 0.00 1 0 G 1344552 Noviherbaspirillum 0.00 1 0 G1 2617509 unclassified Noviherbaspirillum 0.00 1 1 S 2601898 Noviherbaspirillum sp. UKPF54 0.01 11 1 F 80864 Comamonadaceae 0.00 4 3 G 283 Comamonas 0.00 1 1 S 2743470 Comamonas antarctica 0.00 3 2 G 80865 Delftia 0.00 1 1 S 180282 Delftia tsuruhatensis 0.00 1 0 G 28065 Rhodoferax 0.00 1 0 G1 2627954 unclassified Rhodoferax 0.00 1 1 S 2741720 Rhodoferax sp. BAB1 0.00 1 1 G 34072 Variovorax 0.00 1 0 G 3051137 Paracidovorax 0.00 1 1 S 80867 Paracidovorax avenae 0.00 4 0 F 506 Alcaligenaceae 0.00 1 0 G 507 Alcaligenes 0.00 1 1 S 511 Alcaligenes faecalis 0.00 1 0 G 222 Achromobacter 0.00 1 1 S 1353891 Achromobacter deleyi 0.00 1 1 G 90243 Oligella 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.01 10 0 O 206351 Neisseriales 0.01 8 6 F 481 Neisseriaceae 0.00 1 0 G 71 Simonsiella 0.00 1 1 S 72 Simonsiella muelleri 0.00 1 1 G 482 Neisseria 0.00 1 0 F 2897176 Aquaspirillaceae 0.00 1 0 G 57479 Microvirgula 0.00 1 1 S 57480 Microvirgula aerodenitrificans 0.00 1 1 F 2897177 Chitinibacteraceae 0.00 3 0 O 206389 Rhodocyclales 0.00 3 1 F 2008795 Azonexaceae 0.00 2 0 G 88875 Ferribacterium 0.00 2 2 S 76259 Ferribacterium limneticum 0.00 2 1 O 32003 Nitrosomonadales 0.00 1 1 F 206379 Nitrosomonadaceae 0.00 2 0 C 580370 Zetaproteobacteria 0.00 2 0 O 580371 Mariprofundales 0.00 2 0 F 580372 Mariprofundaceae 0.00 2 2 G 377315 Mariprofundus 0.00 2 0 C 1807140 Acidithiobacillia 0.00 2 0 O 225057 Acidithiobacillales 0.00 2 0 F 225058 Acidithiobacillaceae 0.00 2 2 G 119977 Acidithiobacillus 9.87 10634 3224 D1 1783272 Terrabacteria group 4.01 4321 186 P 1239 Bacillota 3.23 3477 48 C 91061 Bacilli 1.67 1796 25 O 1385 Bacillales 1.24 1332 6 F 186817 Bacillaceae 1.12 1204 0 G 84406 Virgibacillus 1.12 1204 1204 S 447199 Virgibacillus salarius 0.09 97 11 G 1386 Bacillus 0.04 38 1 G1 653685 Bacillus subtilis group 0.03 33 0 G2 1938374 Bacillus amyloliquefaciens group 0.02 25 24 S 492670 Bacillus velezensis 0.00 1 1 S1 1458206 Bacillus velezensis NJN-6 0.01 8 8 S 1390 Bacillus amyloliquefaciens 0.00 4 1 S 1423 Bacillus subtilis 0.00 2 2 S1 135461 Bacillus subtilis subsp. subtilis 0.00 1 1 S1 86029 Bacillus subtilis subsp. natto 0.03 28 0 G1 86661 Bacillus cereus group 0.01 9 9 S 1392 Bacillus anthracis 0.01 8 2 S 1396 Bacillus cereus 0.00 4 4 S1 1454382 Bacillus cereus D17 0.00 1 1 S1 1003239 Bacillus cereus C1L 0.00 1 1 S1 572264 Bacillus cereus 03BB102 0.01 7 7 S 1428 Bacillus thuringiensis 0.00 3 3 S 64104 Bacillus pseudomycoides 0.00 1 1 S 1405 Bacillus mycoides 0.02 18 0 G1 1792192 Bacillus altitudinis complex 0.02 18 18 S 293387 Bacillus altitudinis 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 2874284 Bacillus sp. CRB-7 0.00 1 1 S 561879 Bacillus safensis 0.01 10 0 G 175304 Lentibacillus 0.01 9 9 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 1 S 2911514 Lentibacillus daqui 0.00 2 1 G 2800373 Priestia 0.00 1 1 S 1404 Priestia megaterium 0.00 2 2 G 2837504 Heyndrickxia 0.00 2 1 G 2685905 Salicibibacter 0.00 1 1 S 2099786 Salicibibacter kimchii 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 G1 2639704 unclassified Anoxybacillus 0.00 1 0 G 2944627 Paenalkalicoccus 0.00 1 1 S 2592382 Paenalkalicoccus suaedae 0.00 1 0 G 2675229 Peribacillus 0.00 1 0 S 1478 Peribacillus simplex 0.00 1 1 S1 1349754 Peribacillus simplex NBRC 15720 = DSM 1321 0.00 1 0 G 3033930 Fervidibacillus 0.00 1 1 S 2980026 Fervidibacillus albus 0.00 1 0 G 2675233 Metabacillus 0.00 1 1 G1 2675274 unclassified Metabacillus 0.00 1 0 G 1906945 Parageobacillus 0.00 1 1 S 1426 Parageobacillus thermoglucosidasius 0.00 1 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 1 0 S 86665 Halalkalibacterium halodurans 0.00 1 1 S1 272558 Halalkalibacterium halodurans C-125 0.00 1 0 G 2675230 Cytobacillus 0.00 1 1 S 665099 Cytobacillus oceanisediminis 0.00 1 0 G 2837510 Siminovitchia 0.00 1 1 S 254758 Siminovitchia fortis 0.31 338 2 F 90964 Staphylococcaceae 0.31 331 31 G 1279 Staphylococcus 0.18 190 190 S 1280 Staphylococcus aureus 0.05 51 51 S 1282 Staphylococcus epidermidis 0.02 26 26 S 28035 Staphylococcus lugdunensis 0.02 21 21 S 2044912 Staphylococcus debuckii 0.00 4 4 S 70255 Staphylococcus condimenti 0.00 3 3 S 1283 Staphylococcus haemolyticus 0.00 1 1 S 29388 Staphylococcus capitis 0.00 1 1 S 29378 Staphylococcus arlettae 0.00 1 1 S 214473 Staphylococcus nepalensis 0.00 1 1 S 1290 Staphylococcus hominis 0.00 1 1 S 1286 Staphylococcus simulans 0.00 4 2 G 2803850 Mammaliicoccus 0.00 2 2 S 42858 Mammaliicoccus lentus 0.00 1 0 G 45669 Salinicoccus 0.00 1 0 G1 2628837 unclassified Salinicoccus 0.00 1 1 S 3136731 Salinicoccus sp. Bachu38 0.06 67 0 F 186822 Paenibacillaceae 0.06 62 0 G 44249 Paenibacillus 0.04 46 1 G1 185978 unclassified Paenibacillus 0.02 19 19 S 2921460 Paenibacillus sp. FSL K6-1096 0.01 15 15 S 715179 Paenibacillus sp. sptzw28 0.01 8 8 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 2859228 Paenibacillus sp. R14(2021) 0.00 1 1 S 2895946 Paenibacillus sp. MMS20-IR301 0.01 9 0 S 1406 Paenibacillus polymyxa 0.01 6 6 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 2 2 S1 886882 Paenibacillus polymyxa SC2 0.00 1 1 S1 349520 Paenibacillus polymyxa E681 0.00 2 2 S 539262 Paenibacillus hunanensis 0.00 2 2 S 1619311 Paenibacillus physcomitrellae 0.00 1 1 S 162209 Paenibacillus naphthalenovorans 0.00 1 1 S 79263 Paenibacillus chitinolyticus 0.00 1 1 S 1473112 Paenibacillus guangzhouensis 0.00 3 2 G 329857 Cohnella 0.00 1 1 S 2507935 Cohnella abietis 0.00 1 1 G 55080 Brevibacillus 0.00 1 0 F1 85151 Aneurinibacillus group 0.00 1 1 G 55079 Aneurinibacillus 0.01 13 0 F 186820 Listeriaceae 0.01 10 1 G 1637 Listeria 0.01 7 0 S 1638 Listeria ivanovii 0.01 7 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.01 7 7 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 1 1 S 1639 Listeria monocytogenes 0.00 1 0 G1 2642072 unclassified Listeria 0.00 1 1 S 1844999 Listeria sp. PSOL-1 0.00 3 0 G 2755 Brochothrix 0.00 3 3 S 2756 Brochothrix thermosphacta 0.01 8 0 F 186818 Planococcaceae 0.01 6 0 G 651660 Paenisporosarcina 0.01 6 6 S 2320858 Paenisporosarcina cavernae 0.00 1 1 G 1569 Sporosarcina 0.00 1 0 G 160795 Ureibacillus 0.00 1 1 S 367743 Ureibacillus thermophilus 0.01 6 0 F 186823 Alicyclobacillaceae 0.01 6 0 G 29330 Alicyclobacillus 0.00 5 5 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 S 392011 Alicyclobacillus fastidiosus 0.00 2 1 F 186824 Thermoactinomycetaceae 0.00 1 1 G 1274351 Kroppenstedtia 0.00 2 0 O1 539002 Bacillales incertae sedis 0.00 2 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 2 2 G 33986 Exiguobacterium 0.00 2 0 F 539738 Gemellaceae 0.00 2 2 G 1378 Gemella 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 1.52 1633 12 O 186826 Lactobacillales 0.87 933 0 F 81852 Enterococcaceae 0.86 929 2 G 1350 Enterococcus 0.85 911 910 S 1351 Enterococcus faecalis 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 0.01 13 12 S 1352 Enterococcus faecium 0.00 1 1 S1 1328870 Enterococcus faecium UC7251 0.00 3 2 S 1354 Enterococcus hirae 0.00 1 1 S1 768486 Enterococcus hirae ATCC 9790 0.00 3 0 G 51668 Tetragenococcus 0.00 3 3 S 51669 Tetragenococcus halophilus 0.00 1 0 G 2737 Vagococcus 0.00 1 0 G1 2648499 unclassified Vagococcus 0.00 1 1 S 3109030 Vagococcus sp. B2T-5 0.50 534 0 F 1300 Streptococcaceae 0.50 534 30 G 1301 Streptococcus 0.45 487 486 S 1308 Streptococcus thermophilus 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.00 4 0 S 1313 Streptococcus pneumoniae 0.00 2 2 S1 1159083 Streptococcus pneumoniae PCS8235 0.00 1 1 S1 869311 Streptococcus pneumoniae SPN032672 0.00 1 1 S1 525381 Streptococcus pneumoniae TCH8431/19A 0.00 3 3 S 1811193 Streptococcus pantholopis 0.00 3 2 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2975324 Streptococcus sp. FSL R7-0248 0.00 2 2 S 1314 Streptococcus pyogenes 0.00 1 1 S 1346 Streptococcus iniae 0.00 1 1 S 1111760 Streptococcus troglodytae 0.00 1 0 S 1311 Streptococcus agalactiae 0.00 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 1 1 S 2173853 Streptococcus chenjunshii 0.00 1 1 S 68892 Streptococcus infantis 0.13 142 5 F 33958 Lactobacillaceae 0.04 48 29 G 46255 Weissella 0.01 11 11 S 1249 Weissella paramesenteroides 0.00 3 3 S 155866 Weissella soli 0.00 2 2 S 1583 Weissella confusa 0.00 2 2 S 137591 Weissella cibaria 0.00 1 1 S 1631871 Weissella jogaejeotgali 0.02 23 23 G 2767889 Loigolactobacillus 0.01 15 1 G 2767887 Ligilactobacillus 0.01 13 13 S 89059 Ligilactobacillus acidipiscis 0.00 1 1 S 1606 Ligilactobacillus aviarius 0.01 10 0 G 2767842 Lactiplantibacillus 0.01 9 9 S 1590 Lactiplantibacillus plantarum 0.00 1 1 S 1589 Lactiplantibacillus pentosus 0.01 9 3 G 1578 Lactobacillus 0.01 6 3 S 1584 Lactobacillus delbrueckii 0.00 3 3 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.01 9 0 G 2742598 Limosilactobacillus 0.01 8 8 S 1613 Limosilactobacillus fermentum 0.00 1 1 S 2742601 Limosilactobacillus portuensis 0.00 5 0 G 2759736 Lacticaseibacillus 0.00 4 3 S 1597 Lacticaseibacillus paracasei 0.00 1 1 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.00 1 1 S 3025672 Lacticaseibacillus pabuli 0.00 4 2 G 1253 Pediococcus 0.00 1 1 S 187452 Pediococcus claussenii 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.00 3 2 G 1243 Leuconostoc 0.00 1 1 S 1246 Leuconostoc lactis 0.00 3 0 G 2767886 Levilactobacillus 0.00 3 3 S 1580 Levilactobacillus brevis 0.00 2 2 G 46254 Oenococcus 0.00 1 1 G 3118928 Xylocopilactobacillus 0.00 1 0 G 2930384 Periweissella 0.00 1 1 S 2506420 Periweissella cryptocerci 0.00 1 1 G 2767881 Fructilactobacillus 0.00 1 0 G 2767879 Companilactobacillus 0.00 1 1 S 83526 Companilactobacillus paralimentarius 0.00 1 1 G 2767877 Apilactobacillus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.01 7 2 F 186827 Aerococcaceae 0.00 4 1 G 1375 Aerococcus 0.00 3 3 S 87541 Aerococcus christensenii 0.00 1 0 G 2689587 Suicoccus 0.00 1 1 S 2036206 Suicoccus acidiformans 0.00 5 0 F 186828 Carnobacteriaceae 0.00 3 0 G 117563 Granulicatella 0.00 3 3 S 46124 Granulicatella adiacens 0.00 2 0 G 82800 Desemzia 0.00 2 2 S 82801 Desemzia incerta 0.55 595 5 C 186801 Clostridia 0.27 287 163 O 186802 Eubacteriales 0.07 72 55 F 31984 Heliobacteriaceae 0.02 17 0 G 79598 Heliorestis 0.02 17 17 S 356322 Heliorestis convoluta 0.03 28 0 F 31979 Clostridiaceae 0.03 28 1 G 1485 Clostridium 0.01 11 1 S 1491 Clostridium botulinum 0.01 10 10 S1 1408283 Clostridium botulinum CDC_1436 0.01 9 9 S 1502 Clostridium perfringens 0.00 5 0 G1 2614128 unclassified Clostridium 0.00 5 5 S 3070996 Clostridium sp. MB40-C1 0.00 1 1 S 1501 Clostridium pasteurianum 0.00 1 1 S 1520 Clostridium beijerinckii 0.01 7 0 O1 538999 Eubacteriales incertae sedis 0.00 3 0 G 1686313 Fenollaria 0.00 3 3 S 938288 Fenollaria massiliensis 0.00 2 0 G 1392389 Intestinimonas 0.00 2 2 S 1297617 Intestinimonas butyriciproducens 0.00 1 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 1 1 G 73918 Thermaerobacter 0.00 1 0 G 1918454 Flintibacter 0.00 1 0 G1 2610894 unclassified Flintibacter 0.00 1 1 S 2610895 Flintibacter sp. KGMB00164 0.00 5 0 F 1491775 Proteinivoraceae 0.00 5 5 G 1491776 Proteinivorax 0.00 5 0 F 216572 Oscillospiraceae 0.00 3 0 G 1263 Ruminococcus 0.00 2 2 S 1161942 Ruminococcus champanellensis 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.00 1 0 G 216851 Faecalibacterium 0.00 1 0 G1 2646395 unclassified Faecalibacterium 0.00 1 1 S 2929493 Faecalibacterium sp. I3-3-89 0.00 1 0 G 459786 Oscillibacter 0.00 1 1 S 2763056 Oscillibacter hominis 0.00 4 0 F 3046368 Aristaeellaceae 0.00 4 4 G 3046369 Aristaeella 0.00 2 0 F 3085642 Butyricicoccaceae 0.00 2 0 G 1928820 Intestinibacillus 0.00 2 0 G1 2635293 unclassified Intestinibacillus 0.00 2 2 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 F 186807 Peptococcaceae 0.00 1 0 G 2924872 Acididesulfobacillus 0.00 1 1 S 1561005 Acididesulfobacillus acetoxydans 0.26 275 0 O 53433 Halanaerobiales 0.25 274 0 F 53434 Halobacteroidaceae 0.25 273 0 G 42417 Halobacteroides 0.25 273 0 S 42422 Halobacteroides halobius 0.25 273 273 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 1 0 O1 387655 Halanaerobiales incertae sedis 0.00 1 0 G 1769008 Anoxybacter 0.00 1 1 S 1323375 Anoxybacter fermentans 0.02 17 0 O 3082720 Peptostreptococcales 0.01 9 3 F 186804 Peptostreptococcaceae 0.00 2 0 G 1505657 Intestinibacter 0.00 2 2 S 261299 Intestinibacter bartlettii 0.00 2 0 G 1870884 Clostridioides 0.00 2 2 S 1496 Clostridioides difficile 0.00 1 0 G 1257 Peptostreptococcus 0.00 1 1 S 3003601 Peptostreptococcus equinus 0.00 1 0 G 1501226 Romboutsia 0.00 1 0 G1 2626894 unclassified Romboutsia 0.00 1 1 S 2708053 Romboutsia sp. 13368 0.00 5 0 F 3030910 Anaerovoracaceae 0.00 5 5 G 86331 Mogibacterium 0.00 2 0 F 3118654 Caminicellaceae 0.00 2 0 G 166484 Caminicella 0.00 2 2 S 166485 Caminicella sporogenes 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.01 10 0 O 3085636 Lachnospirales 0.01 10 0 F 186803 Lachnospiraceae 0.00 3 0 G 1213720 Stomatobaculum 0.00 3 0 G1 2643635 unclassified Stomatobaculum 0.00 3 3 S 3059030 Stomatobaculum sp. F0698 0.00 2 0 G 1506553 Lachnoclostridium 0.00 2 0 S 66219 Lachnoclostridium phytofermentans 0.00 2 2 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 1 0 G 3088373 Chakrabartyella 0.00 1 1 S 2918914 Chakrabartyella piscis 0.00 1 0 G 2316020 Mediterraneibacter 0.00 1 0 S 33039 [Ruminococcus] torques 0.00 1 1 S1 657313 [Ruminococcus] torques L2-14 0.00 1 0 G 1506577 Tyzzerella 0.00 1 1 S 36835 [Clostridium] colinum 0.00 1 0 G 207244 Anaerostipes 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.00 1 0 G 2383 Candidatus Epulonipiscium 0.00 1 1 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039170 Desulfitibacteraceae 0.00 1 0 G 3234175 Metallumcola 0.00 1 1 S 3039180 Metallumcola ferriviriculae 0.03 28 0 C 1737404 Tissierellia 0.03 28 0 O 1737405 Tissierellales 0.03 28 0 F 1570339 Peptoniphilaceae 0.02 17 0 G 1161127 Murdochiella 0.02 17 17 S 1852373 Murdochiella vaginalis 0.01 6 1 G 165779 Anaerococcus 0.00 4 0 S 33034 Anaerococcus prevotii 0.00 4 4 S1 525919 Anaerococcus prevotii DSM 20548 0.00 1 0 G1 2614126 unclassified Anaerococcus 0.00 1 1 S 3036300 Anaerococcus sp. Marseille-Q7828 0.00 3 0 G 150022 Finegoldia 0.00 3 3 S 1260 Finegoldia magna 0.00 2 0 G 162289 Peptoniphilus 0.00 1 1 S 54005 Peptoniphilus harei 0.00 1 1 S 3036303 Peptoniphilus genitalis 0.02 24 0 C 909932 Negativicutes 0.01 13 0 O 909929 Selenomonadales 0.01 13 0 F 1843491 Selenomonadaceae 0.01 9 0 G 864 Pectinatus 0.01 9 9 S 865 Pectinatus frisingensis 0.00 4 3 G 970 Selenomonas 0.00 1 0 G1 2637378 unclassified Selenomonas 0.00 1 1 S 1884263 Selenomonas sp. oral taxon 920 0.01 11 0 O 1843489 Veillonellales 0.01 11 0 F 31977 Veillonellaceae 0.01 7 6 G 29465 Veillonella 0.00 1 1 S 423477 Veillonella rogosae 0.00 3 0 G 906 Megasphaera 0.00 2 2 S 2144175 Megasphaera stantonii 0.00 1 1 S 907 Megasphaera elsdenii 0.00 1 1 G 39948 Dialister 0.01 9 0 C 526524 Erysipelotrichia 0.01 9 1 O 526525 Erysipelotrichales 0.01 8 4 F 128827 Erysipelotrichaceae 0.00 2 0 G 1729679 Faecalibaculum 0.00 2 2 S 1702221 Faecalibaculum rodentium 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1648 Erysipelothrix rhusiopathiae 0.00 1 0 G 174708 Allobaculum 0.00 1 1 S 2834459 Allobaculum mucilyticum 0.00 1 0 C 1676648 Limnochordia 0.00 1 0 O 1676649 Limnochordales 0.00 1 0 F 1676650 Limnochordaceae 0.00 1 0 G 1676651 Limnochorda 0.00 1 1 S 1555112 Limnochorda pilosa 0.00 1 0 C 3086086 Dethiobacteria 0.00 1 0 O 3086087 Dethiobacterales 0.00 1 0 F 3086088 Dethiobacteraceae 0.00 1 0 G 338648 Candidatus Contubernalis 0.00 1 1 S 338645 Candidatus Contubernalis alkalaceticus 1.26 1354 0 D2 1798711 Cyanobacteriota/Melainabacteria group 1.26 1354 2 P 1117 Cyanobacteriota 1.26 1352 147 C 3028117 Cyanophyceae 0.85 915 5 C1 1301283 Oscillatoriophycideae 0.78 839 7 O 1150 Oscillatoriales 0.67 718 0 F 2934961 Sirenicapillariaceae 0.67 718 0 G 2596745 Limnospira 0.67 718 3 S 147322 Limnospira indica 0.65 704 704 S1 2760438 Limnospira indica BM01 0.01 11 11 S1 376219 Limnospira indica PCC 8005 0.10 113 0 F 1892252 Microcoleaceae 0.08 90 86 G 54304 Planktothrix 0.00 4 0 S 1160 Planktothrix agardhii 0.00 4 4 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.02 23 0 G 1492710 Oxynema 0.02 23 0 S 2874213 Oxynema aestuarii 0.02 23 23 S1 2064643 Oxynema aestuarii AP17 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1198 Phormidium 0.00 1 0 S 2974039 Phormidium yuhuli 0.00 1 1 S1 2940671 Phormidium yuhuli AB48 0.07 71 1 O 1118 Chroococcales 0.05 55 0 F 1890449 Microcystaceae 0.05 55 0 G 1125 Microcystis 0.05 54 0 G1 2643300 unclassified Microcystis 0.05 54 54 S 1967666 Microcystis sp. MC19 0.00 1 1 S 1126 Microcystis aeruginosa 0.01 11 0 F 1890450 Aphanothecaceae 0.01 10 0 G 1453359 Candidatus Atelocyanobacterium 0.01 10 1 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 9 9 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 1 0 G 28070 Gloeothece 0.00 1 0 S 2546356 Gloeothece citriformis 0.00 1 1 S1 65393 Gloeothece citriformis PCC 7424 0.00 3 3 F 1890464 Chroococcaceae 0.00 1 0 F 2815910 Geminocystaceae 0.00 1 0 G 102234 Cyanobacterium 0.00 1 0 G1 2629879 unclassified Cyanobacterium 0.00 1 1 S 2878255 Cyanobacterium sp. Dongsha4 0.12 133 0 O 1955042 Gloeomargaritales 0.12 133 0 F 1955043 Gloeomargaritaceae 0.12 133 0 G 1188227 Gloeomargarita 0.12 133 0 S 1188228 Gloeomargarita lithophora 0.12 133 133 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.05 59 1 O 1161 Nostocales 0.02 26 5 F 1892259 Aphanizomenonaceae 0.02 20 0 G 752201 Sphaerospermopsis 0.02 20 0 S 984207 Sphaerospermopsis torques-reginae 0.02 20 20 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 1 0 G 748770 Dolichospermum 0.00 1 0 S 136073 Dolichospermum compactum 0.00 1 1 S1 1973481 Dolichospermum compactum NIES-806 0.02 22 12 F 1162 Nostocaceae 0.01 8 0 G 1163 Anabaena 0.01 7 0 S 1165 Anabaena cylindrica 0.01 7 7 S1 272123 Anabaena cylindrica PCC 7122 0.00 1 0 G1 2619674 unclassified Anabaena 0.00 1 1 S 2490939 Anabaena sp. YBS01 0.00 2 1 G 1177 Nostoc 0.00 1 0 G1 2593658 unclassified Nostoc 0.00 1 1 S 2576904 Nostoc sp. TCL26-01 0.01 7 0 F 2661849 Calotrichaceae 0.01 7 0 G 1186 Calothrix 0.01 7 0 G1 2619626 unclassified Calothrix 0.00 5 5 S 1170562 Calothrix sp. PCC 6303 0.00 2 2 S 1337936 Calothrix sp. 336/3 0.00 2 0 F 1185 Rivulariaceae 0.00 2 0 G 373984 Rivularia 0.00 2 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 2 2 S 373994 Rivularia sp. PCC 7116 0.00 1 0 F 119859 Tolypothrichaceae 0.00 1 0 G 111782 Tolypothrix 0.00 1 0 G1 2649714 unclassified Tolypothrix 0.00 1 1 S 1188 Tolypothrix sp. PCC 7601 0.05 53 52 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 1 G 33071 Gloeobacter 0.03 29 3 O 1890424 Synechococcales 0.02 20 0 F 1890426 Synechococcaceae 0.02 20 0 G 1129 Synechococcus 0.02 19 1 G1 2626047 unclassified Synechococcus 0.02 17 17 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 1 S 195250 Synechococcus sp. PCC 7336 0.00 1 0 S 32046 Synechococcus elongatus 0.00 1 1 S1 3115655 Synechococcus elongatus IITB5 0.00 4 0 F 2881426 Prochlorococcaceae 0.00 3 1 G 1218 Prochlorococcus 0.00 2 0 S 1219 Prochlorococcus marinus 0.00 2 2 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.00 1 0 G 167375 Cyanobium 0.00 1 0 S 59930 Cyanobium gracile 0.00 1 1 S1 292564 Cyanobium gracile PCC 6307 0.00 2 0 F 1890428 Merismopediaceae 0.00 2 0 G 1142 Synechocystis 0.00 2 0 G1 2640012 unclassified Synechocystis 0.00 2 2 S 3144951 Synechocystis sp. LKSZ1 0.01 7 0 O 3079749 Leptolyngbyales 0.01 7 0 F 1890438 Leptolyngbyaceae 0.01 7 0 F1 3081713 Leptolyngbya group 0.01 7 0 G 47251 Leptolyngbya 0.01 6 0 G1 2650499 unclassified Leptolyngbya 0.01 6 6 S 2812896 Leptolyngbya sp. 7M 0.00 1 1 S 1184 Leptolyngbya boryana 0.00 3 0 O 2881377 Pseudanabaenales 0.00 3 0 F 1890436 Pseudanabaenaceae 0.00 3 0 G 1152 Pseudanabaena 0.00 3 0 G1 2593292 unclassified Pseudanabaena 0.00 2 2 S 82654 Pseudanabaena sp. PCC 7367 0.00 1 1 S 685565 Pseudanabaena sp. ABRG5-3 0.00 2 0 O 3079744 Acaryochloridales 0.00 2 0 F 1890429 Acaryochloridaceae 0.00 2 0 G 155977 Acaryochloris 0.00 2 0 G1 2631661 unclassified Acaryochloris 0.00 2 2 S 2740837 Acaryochloris sp. 'Moss Beach' 0.00 2 0 O 3079757 Gomontiellales 0.00 2 0 F 1890431 Chamaesiphonaceae 0.00 2 0 G 217161 Chamaesiphon 0.00 2 0 S 1173032 Chamaesiphon minutus 0.00 2 2 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 1 0 O 52604 Pleurocapsales 0.00 1 0 F 1890498 Dermocarpellaceae 0.00 1 0 G 102115 Stanieria 0.00 1 0 S 102116 Stanieria cyanosphaera 0.00 1 1 S1 111780 Stanieria cyanosphaera PCC 7437 0.00 1 0 O 3079748 Oculatellales 0.00 1 0 F 2303507 Oculatellaceae 0.00 1 0 G 3065395 Thermocoleostomius 0.00 1 0 S 3065396 Thermocoleostomius sinensis 0.00 1 1 S1 2016057 Thermocoleostomius sinensis A174 0.80 865 10 P 201174 Actinomycetota 0.72 778 36 C 1760 Actinomycetes 0.39 420 16 O 85006 Micrococcales 0.21 224 0 F 2805591 Tropherymataceae 0.21 224 0 G 2038 Tropheryma 0.21 224 224 S 2039 Tropheryma whipplei 0.07 77 0 F 1268 Micrococcaceae 0.04 46 0 G 1742989 Glutamicibacter 0.04 43 0 G1 2627139 unclassified Glutamicibacter 0.04 43 43 S 1155384 Glutamicibacter sp. ZJUTW 0.00 3 3 S 37929 Glutamicibacter nicotianae 0.02 25 3 G 32207 Rothia 0.02 17 16 S 43675 Rothia mucilaginosa 0.00 1 1 S1 680646 Rothia mucilaginosa DY-18 0.00 3 3 S 2047 Rothia dentocariosa 0.00 1 1 S 169480 Rothia amarae 0.00 1 1 S 172042 Rothia aeria 0.00 2 0 G 1742991 Pseudoglutamicibacter 0.00 2 2 S 98671 Pseudoglutamicibacter albus 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2600159 Arthrobacter sp. UKPF54-2 0.00 1 1 G 57493 Kocuria 0.00 1 1 G 1742993 Pseudarthrobacter 0.00 1 0 G 370735 Zhihengliuella 0.00 1 0 G1 2626589 unclassified Zhihengliuella 0.00 1 1 S 2058657 Zhihengliuella sp. ISTPL4 0.05 52 24 F 85023 Microbacteriaceae 0.01 9 4 G 33882 Microbacterium 0.00 1 1 S 3079935 Microbacterium limosum 0.00 1 1 S 2541726 Microbacterium wangchenii 0.00 1 1 S 104336 Microbacterium foliorum 0.00 1 0 G1 2609290 unclassified Microbacterium 0.00 1 1 S 2981139 Microbacterium sp. AB 0.00 1 1 S 162426 Microbacterium hominis 0.01 7 4 G 2034 Curtobacterium 0.00 3 0 G1 257496 unclassified Curtobacterium 0.00 3 3 S 2862880 Curtobacterium sp. TC1 0.00 4 0 F1 1655488 Luna cluster 0.00 4 2 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 0 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 1 1 G 529883 Rhodoluna 0.00 2 1 G 33877 Agromyces 0.00 1 1 S 1858653 Agromyces mangrovi 0.00 2 0 G 427753 Humibacter 0.00 2 2 S 2599293 Humibacter ginsenosidimutans 0.00 1 1 G 33886 Rathayibacter 0.00 1 1 G 55968 Leucobacter 0.00 1 1 G 337004 Microcella 0.00 1 0 G 120212 Subtercola 0.00 1 1 S 2895559 Subtercola endophyticus 0.04 39 0 F 85016 Cellulomonadaceae 0.04 39 0 G 1707 Cellulomonas 0.04 38 0 G1 2620175 unclassified Cellulomonas 0.03 37 37 S 2591145 Cellulomonas sp. Y8 0.00 1 1 S 2704467 Cellulomonas sp. H30R-01 0.00 1 1 S 2566013 Cellulomonas shaoxiangyii 0.01 7 0 F 85019 Brevibacteriaceae 0.01 7 1 G 1696 Brevibacterium 0.01 6 0 G1 2614124 unclassified Brevibacterium 0.00 3 3 S 2575923 Brevibacterium sp. CS2 0.00 3 3 S 2777556 Brevibacterium sp. SMBL_HHYL_HB1 0.00 4 0 F 2805590 Ornithinimicrobiaceae 0.00 4 0 G 125287 Ornithinimicrobium 0.00 4 4 S 2283195 Ornithinimicrobium avium 0.00 1 0 F 85020 Dermabacteraceae 0.00 1 0 G 36739 Dermabacter 0.00 1 1 S 1667168 Dermabacter jinjuensis 0.10 107 0 O 85007 Mycobacteriales 0.07 79 0 F 1653 Corynebacteriaceae 0.07 79 17 G 1716 Corynebacterium 0.04 41 41 S 43765 Corynebacterium amycolatum 0.01 10 10 S 679663 Corynebacterium canis 0.01 6 6 S 38289 Corynebacterium jeikeium 0.00 2 2 S 43768 Corynebacterium matruchotii 0.00 1 1 S 156976 Corynebacterium riegelii 0.00 1 1 S 161895 Corynebacterium phocae 0.00 1 1 S 2080740 Corynebacterium yudongzhengii 0.01 15 0 F 85025 Nocardiaceae 0.01 10 0 G 1817 Nocardia 0.01 7 7 S 37332 Nocardia seriolae 0.00 1 1 S 1824 Nocardia asteroides 0.00 1 1 S 37326 Nocardia brasiliensis 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975998 Nocardia sp. NBC_01730 0.00 5 3 G 1827 Rhodococcus 0.00 1 0 G1 2840174 Rhodococcus erythropolis group 0.00 1 1 S 334542 Rhodococcus qingshengii 0.00 1 1 S 1805840 Rhodococcus sovatensis 0.01 7 1 F 1762 Mycobacteriaceae 0.00 4 4 G 1866885 Mycolicibacterium 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 120793 Mycobacterium avium complex (MAC) 0.00 1 1 S 701042 Mycobacterium marseillense 0.00 1 0 G 670516 Mycobacteroides 0.00 1 1 S 1578165 Mycobacteroides saopaulense 0.00 3 0 F 85026 Gordoniaceae 0.00 3 0 G 2053 Gordonia 0.00 3 3 S 84595 Gordonia polyisoprenivorans 0.00 3 0 F 2805586 Lawsonellaceae 0.00 3 0 G 1847725 Lawsonella 0.00 3 3 S 1528099 Lawsonella clevelandensis 0.10 105 0 O 85009 Propionibacteriales 0.08 88 9 F 31957 Propionibacteriaceae 0.07 77 4 G 1912216 Cutibacterium 0.06 69 69 S 1747 Cutibacterium acnes 0.00 4 4 S 33011 Cutibacterium granulosum 0.00 1 1 G 29404 Microlunatus 0.00 1 1 G 1085622 Propioniciclava 0.01 16 0 F 85015 Nocardioidaceae 0.01 14 0 G 1839 Nocardioides 0.01 11 11 S 3095075 Nocardioides renjunii 0.00 1 1 S 433659 Nocardioides mesophilus 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 2996826 Nocardioides sp. Arc9.136 0.00 1 0 S 450734 Nocardioides dokdonensis 0.00 1 1 S1 1300347 Nocardioides dokdonensis FR1436 0.00 2 0 G 2040 Aeromicrobium 0.00 2 2 S 1736691 Aeromicrobium choanae 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 1 G1 2644121 unclassified Kribbella 0.06 66 0 O 85011 Kitasatosporales 0.06 66 1 F 2062 Streptomycetaceae 0.06 64 6 G 1883 Streptomyces 0.04 48 1 G1 2593676 unclassified Streptomyces 0.02 23 23 S 2903645 Streptomyces sp. NBC_00310 0.00 5 5 S 2750025 Streptomyces sp. CB00271 0.00 5 5 S 2099583 Streptomyces sp. ICC1 0.00 4 4 S 3075198 Streptomyces sp. ITFR-16 0.00 2 2 S 1333528 Streptomyces sp. GMY02 0.00 2 2 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 862751 Streptomyces sp. SirexAA-E 0.00 1 1 S 3038642 Streptomyces sp. 11x1 0.00 1 1 S 2903882 Streptomyces sp. NBC_01478 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 2975842 Streptomyces sp. NBC_00820 0.00 1 1 S 2900152 Streptomyces sp. LX-29 0.00 2 0 S 68192 Streptomyces cyaneogriseus 0.00 2 2 S1 477245 Streptomyces cyaneogriseus subsp. noncyanogenus 0.00 1 0 G1 629295 Streptomyces griseus group 0.00 1 0 G2 1482561 Streptomyces anulatus subgroup 0.00 1 1 S 1892 Streptomyces anulatus 0.00 1 0 G1 2839105 Streptomyces violaceusniger group 0.00 1 1 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 285557 Streptomyces caniferus 0.00 1 1 S 2174846 Streptomyces tirandamycinicus 0.00 1 1 S 1907 Streptomyces glaucescens 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.00 1 1 S 1535768 Streptomyces lunaelactis 0.00 1 0 S 33903 Streptomyces avermitilis 0.00 1 1 S1 227882 Streptomyces avermitilis MA-4680 = NBRC 14893 0.00 1 0 G 2063 Kitasatospora 0.00 1 1 S 3004092 Kitasatospora cathayae 0.01 14 0 O 2037 Actinomycetales 0.01 14 0 F 2049 Actinomycetaceae 0.00 5 3 G 1654 Actinomyces 0.00 1 1 G1 2609248 unclassified Actinomyces 0.00 1 1 S 1655 Actinomyces naeslundii 0.00 5 0 G 1522056 Flaviflexus 0.00 5 5 S 2496867 Flaviflexus ciconiae 0.00 3 2 G 2529408 Schaalia 0.00 1 1 S 1660 Schaalia odontolytica 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.01 8 0 O 85008 Micromonosporales 0.01 8 0 F 28056 Micromonosporaceae 0.00 5 3 G 1873 Micromonospora 0.00 1 1 S 1881 Micromonospora viridifaciens 0.00 1 1 S 299146 Micromonospora narathiwatensis 0.00 2 0 G 35753 Dactylosporangium 0.00 2 0 G1 2621675 unclassified Dactylosporangium 0.00 2 2 S 2975959 Dactylosporangium sp. NBC_01737 0.00 1 0 G 1865 Actinoplanes 0.00 1 1 S 3040509 Actinoplanes oblitus 0.01 6 0 O 85004 Bifidobacteriales 0.01 6 0 F 31953 Bifidobacteriaceae 0.01 6 4 G 1678 Bifidobacterium 0.00 2 0 S 216816 Bifidobacterium longum 0.00 1 1 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 5 0 O 85013 Frankiales 0.00 5 0 F 74712 Frankiaceae 0.00 5 0 G 1854 Frankia 0.00 5 5 S 106370 Frankia casuarinae 0.00 4 0 O 85010 Pseudonocardiales 0.00 4 1 F 2070 Pseudonocardiaceae 0.00 2 0 G 1813 Amycolatopsis 0.00 2 0 G1 2618356 unclassified Amycolatopsis 0.00 1 1 S 1896961 Amycolatopsis sp. AA4 0.00 1 1 S 2745196 Amycolatopsis sp. CA-230715 0.00 1 1 G 65496 Actinoalloteichus 0.00 4 0 O 622450 Actinopolysporales 0.00 4 0 F 622451 Actinopolysporaceae 0.00 4 0 G 1849 Actinopolyspora 0.00 4 4 S 414996 Actinopolyspora erythraea 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 1 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 83676 Nocardiopsaceae 0.00 1 0 G 83677 Thermobifida 0.00 1 1 S 483545 Thermobifida halotolerans 0.06 60 0 C 84998 Coriobacteriia 0.05 54 0 O 1643822 Eggerthellales 0.05 54 1 F 1643826 Eggerthellaceae 0.05 49 0 G 1926677 Raoultibacter 0.05 49 49 S 1907662 Raoultibacter timonensis 0.00 2 0 G 79603 Denitrobacterium 0.00 2 2 S 79604 Denitrobacterium detoxificans 0.00 1 1 G 447020 Adlercreutzia 0.00 1 0 G 2005386 Arabiibacter 0.00 1 1 S 1870985 Arabiibacter massiliensis 0.01 6 0 O 84999 Coriobacteriales 0.01 6 0 F 1643824 Atopobiaceae 0.00 3 0 G 1380 Atopobium 0.00 3 0 G1 2643817 unclassified Atopobium 0.00 3 3 S 712157 Atopobium sp. oral taxon 416 0.00 3 1 G 133925 Olsenella 0.00 2 0 S 133926 Olsenella uli 0.00 2 2 S1 633147 Olsenella uli DSM 7084 0.01 13 0 C 84995 Rubrobacteria 0.01 13 0 O 84996 Rubrobacterales 0.01 13 0 F 84997 Rubrobacteraceae 0.01 13 11 G 42255 Rubrobacter 0.00 2 0 S 49319 Rubrobacter xylanophilus 0.00 2 2 S1 266117 Rubrobacter xylanophilus DSM 9941 0.00 4 0 C 1497346 Thermoleophilia 0.00 3 3 O 588673 Solirubrobacterales 0.00 1 0 O 588674 Thermoleophilales 0.00 1 0 F 320796 Thermoleophilaceae 0.00 1 0 G 192992 Thermoleophilum 0.00 1 1 S 29539 Thermoleophilum album 0.38 409 106 P 544448 Mycoplasmatota 0.18 193 0 O 2790996 Mycoplasmoidales 0.16 168 0 F 2895623 Metamycoplasmataceae 0.11 121 9 G 2767358 Mycoplasmopsis 0.10 104 104 S 55603 Mycoplasmopsis caviae 0.00 3 3 S 2113 Mycoplasmopsis californica 0.00 2 2 S 28903 Mycoplasmopsis bovis 0.00 1 1 S 2107 Mycoplasmopsis pulmonis 0.00 1 1 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 33923 Mycoplasmopsis felis 0.04 47 0 G 2895509 Metamycoplasma 0.04 45 45 S 45363 Metamycoplasma alkalescens 0.00 2 2 S 92400 [Mycoplasma] anseris 0.02 25 4 F 2790998 Mycoplasmoidaceae 0.02 20 0 G 2791001 Malacoplasma 0.01 11 11 S 2116 Malacoplasma iowae 0.01 9 0 S 28227 Malacoplasma penetrans 0.01 9 9 S1 272633 Malacoplasma penetrans HF-2 0.00 1 1 G 2995234 Mycoplasmoides 0.10 106 41 C 31969 Mollicutes 0.05 51 0 O 2085 Mycoplasmatales 0.05 51 0 F 2092 Mycoplasmataceae 0.05 51 7 G 2093 Mycoplasma 0.03 31 0 G1 2683645 unclassified Mycoplasma 0.01 15 15 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.01 10 10 S 2967302 Mycoplasma sp. 1018B 0.01 6 6 S 2801918 Mycoplasma sp. E35C 0.01 12 0 G1 656088 Mycoplasma mycoides group 0.01 10 10 S 1179777 Mycoplasma feriruminatoris 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 0 S 141391 Candidatus Mycoplasma haematolamae 0.00 1 1 S1 1212765 Candidatus Mycoplasma haematolamae str. Purdue 0.01 8 0 O 186329 Acholeplasmatales 0.01 8 0 F 2146 Acholeplasmataceae 0.01 7 0 G 2147 Acholeplasma 0.01 7 7 S 2148 Acholeplasma laidlawii 0.00 1 0 G 2903107 Paracholeplasma 0.00 1 1 S 61635 Paracholeplasma brassicae 0.01 6 0 O 186328 Entomoplasmatales 0.01 6 0 F 2131 Spiroplasmataceae 0.01 6 1 G 2132 Spiroplasma 0.00 4 1 G1 2637901 unclassified Spiroplasma 0.00 3 3 S 3066286 Spiroplasma endosymbiont of Crioceris asparagi 0.00 1 1 S 216932 Spiroplasma chinense 0.00 4 0 C 1912503 Candidatus Izimaplasma 0.00 4 0 O 2975519 Candidatus Izemoplasmatales 0.00 4 0 F 2975520 Candidatus Izemoplasmataceae 0.00 4 0 G 2975521 Candidatus Xianfuyuplasma 0.00 4 4 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.21 231 0 P 200795 Chloroflexota 0.19 207 0 C 388447 Ktedonobacteria 0.19 207 0 O 388448 Ktedonobacterales 0.19 207 0 F 2692416 Ktedonosporobacteraceae 0.19 207 0 G 2692417 Ktedonosporobacter 0.19 207 207 S 2509675 Ktedonosporobacter rubrisoli 0.01 10 0 C 1382928 Ardenticatenia 0.01 10 0 O 3085098 Candidatus Promineifilales 0.01 10 0 F 3085097 Candidatus Promineifilaceae 0.01 10 0 G 1988031 Candidatus Promineifilum 0.01 10 10 S 1806508 Candidatus Promineifilum breve 0.01 6 0 C 32061 Chloroflexia 0.01 6 3 O 32064 Chloroflexales 0.00 3 0 O1 1508594 Chloroflexineae 0.00 3 0 F 1106 Chloroflexaceae 0.00 3 2 G 1107 Chloroflexus 0.00 1 0 S 1108 Chloroflexus aurantiacus 0.00 1 1 S1 324602 Chloroflexus aurantiacus J-10-fl 0.00 3 0 C 292625 Anaerolineae 0.00 3 0 O 292629 Anaerolineales 0.00 3 0 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 1 0 G 1649478 Pelolinea 0.00 1 1 S 913107 Pelolinea submarina 0.00 2 0 C 301297 Dehalococcoidia 0.00 2 0 O 1202465 Dehalococcoidales 0.00 2 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 61434 Dehalococcoides 0.00 1 1 G 670486 Dehalogenimonas 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 2 G 2682228 Tepidiforma 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.19 209 0 P 67819 Armatimonadota 0.19 204 0 C 1077257 Chthonomonadia 0.19 204 0 O 1077263 Chthonomonadales 0.19 204 0 F 1077264 Chthonomonadaceae 0.19 204 0 G 1077265 Chthonomonas 0.19 204 0 S 454171 Chthonomonas calidirosea 0.19 204 204 S1 1303518 Chthonomonas calidirosea T49 0.00 5 0 C 1663419 Fimbriimonadia 0.00 5 0 O 1663425 Fimbriimonadales 0.00 5 0 F 1663426 Fimbriimonadaceae 0.00 5 0 G 1005038 Fimbriimonas 0.00 5 0 S 1005039 Fimbriimonas ginsengisoli 0.00 5 5 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.02 20 0 P 1297 Deinococcota 0.02 20 10 C 188787 Deinococci 0.01 10 0 O 118964 Deinococcales 0.01 10 0 F 183710 Deinococcaceae 0.01 10 2 G 1298 Deinococcus 0.00 3 0 S 432329 Deinococcus peraridilitoris 0.00 3 3 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 3 3 S 200252 Deinococcus aetherius 0.00 2 2 S 32062 Deinococcus radiophilus 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 1.08 1159 8 P 200940 Thermodesulfobacteriota 1.04 1119 0 C 3031651 Desulfuromonadia 1.04 1116 2 O 69541 Desulfuromonadales 1.02 1097 0 F 213421 Desulfuromonadaceae 1.02 1097 1088 G 890 Desulfuromonas 0.01 9 9 S 1603606 Desulfuromonas soudanensis 0.01 16 0 F 3031659 Geopsychrobacteraceae 0.01 16 0 G 37817 Desulfuromusa 0.01 16 0 G1 97902 environmental samples 0.01 16 16 S 219183 uncultured Desulfuromusa sp. 0.00 1 0 F 3031665 Geoalkalibacteraceae 0.00 1 0 G 392332 Geoalkalibacter 0.00 1 1 S 483547 Geoalkalibacter subterraneus 0.00 3 0 O 3031668 Geobacterales 0.00 3 1 F 213422 Geobacteraceae 0.00 2 0 G 28231 Geobacter 0.00 2 0 G1 2627627 unclassified Geobacter 0.00 2 2 S 2597769 Geobacter sp. FeAm09 0.02 23 0 C 67799 Thermodesulfobacteria 0.02 23 23 O 188710 Thermodesulfobacteriales 0.00 5 0 C 3031449 Desulfovibrionia 0.00 5 0 O 213115 Desulfovibrionales 0.00 5 0 F 194924 Desulfovibrionaceae 0.00 3 0 G 2910978 Megalodesulfovibrio 0.00 3 0 S 879 Megalodesulfovibrio gigas 0.00 3 3 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.00 1 0 G 2794998 Maridesulfovibrio 0.00 1 0 S 191026 Maridesulfovibrio hydrothermalis 0.00 1 1 S1 1121451 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 0.00 4 0 C 3024418 Desulfobacteria 0.00 4 0 O 213118 Desulfobacterales 0.00 4 0 F 213119 Desulfobacteraceae 0.00 3 3 G 2289 Desulfobacter 0.00 1 0 G 28222 Desulfobacula 0.00 1 0 S 28223 Desulfobacula toluolica 0.00 1 1 S1 651182 Desulfobacula toluolica Tol2 0.26 279 0 D1 1783270 FCB group 0.26 278 0 D2 68336 Bacteroidota/Chlorobiota group 0.24 260 3 P 976 Bacteroidota 0.11 122 0 C 117743 Flavobacteriia 0.11 122 2 O 200644 Flavobacteriales 0.09 94 0 O1 313602 Flavobacteriales incertae sedis 0.09 94 0 G 336809 Candidatus Karelsulcia 0.09 94 94 S 336810 Candidatus Karelsulcia muelleri 0.02 21 0 F 49546 Flavobacteriaceae 0.01 12 0 G 1016 Capnocytophaga 0.01 7 7 S 28188 Capnocytophaga canimorsus 0.00 4 4 S 1017 Capnocytophaga gingivalis 0.00 1 1 S 1019 Capnocytophaga sputigena 0.00 5 1 G 237 Flavobacterium 0.00 4 4 S 2704140 Flavobacterium bizetiae 0.00 1 0 G 286104 Winogradskyella 0.00 1 1 S 2686077 Winogradskyella forsetii 0.00 1 0 G 252356 Maribacter 0.00 1 1 S 1836467 Maribacter hydrothermalis 0.00 1 0 F1 2907139 Altibacter/Constantimarinum group 0.00 1 0 G 2907134 Constantimarinum 0.00 1 1 S 2562285 Constantimarinum furrinae 0.00 1 0 G 83612 Psychroflexus 0.00 1 0 G1 196864 unclassified Psychroflexus 0.00 1 1 S 2777186 Psychroflexus sp. ALD_RP9 0.00 3 0 F 1755828 Ichthyobacteriaceae 0.00 3 0 G 1755829 Ichthyobacterium 0.00 3 3 S 242600 Ichthyobacterium seriolicida 0.00 2 0 F 2762318 Weeksellaceae 0.00 2 0 F1 2782232 Chryseobacterium group 0.00 2 0 G 59732 Chryseobacterium 0.00 2 0 G1 2593645 unclassified Chryseobacterium 0.00 2 2 S 3093923 Chryseobacterium sp. JJR-5R 0.09 101 0 C 200643 Bacteroidia 0.09 101 3 O 171549 Bacteroidales 0.06 60 0 F 815 Bacteroidaceae 0.06 60 0 G 816 Bacteroides 0.04 40 0 G1 2646097 unclassified Bacteroides 0.04 40 40 S 2847299 Bacteroides sp. DH3716P 0.02 19 19 S 817 Bacteroides fragilis 0.00 1 1 S 291645 Bacteroides nordii 0.03 29 1 F 171552 Prevotellaceae 0.02 23 13 G 2974251 Segatella 0.01 7 5 S 165179 Segatella copri 0.00 2 2 S1 537011 Segatella copri DSM 18205 0.00 3 3 S 2518605 Segatella hominis 0.00 3 0 G 838 Prevotella 0.00 1 1 S 28132 Prevotella melaninogenica 0.00 1 0 G1 2638335 unclassified Prevotella 0.00 1 0 S 652716 Prevotella sp. oral taxon 299 0.00 1 1 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 1 1 S 2801997 Prevotella herbatica 0.00 1 1 G 577309 Paraprevotella 0.00 1 0 G 2884814 Pseudoprevotella 0.00 1 1 S 2133944 Pseudoprevotella muciniphila 0.00 5 0 F 171551 Porphyromonadaceae 0.00 5 0 G 836 Porphyromonas 0.00 3 0 G1 2645799 unclassified Porphyromonas 0.00 3 3 S 712435 Porphyromonas sp. oral taxon 275 0.00 2 2 S 322095 Porphyromonas somerae 0.00 2 0 F 2005473 Muribaculaceae 0.00 2 0 G 2518495 Duncaniella 0.00 2 2 G1 2649562 unclassified Duncaniella 0.00 1 0 F 171550 Rikenellaceae 0.00 1 0 G 239759 Alistipes 0.00 1 1 S 626932 Alistipes indistinctus 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.03 32 0 C 768503 Cytophagia 0.03 32 0 O 768507 Cytophagales 0.01 13 0 F 1501348 Amoebophilaceae 0.01 13 0 G 273135 Candidatus Cardinium 0.01 13 13 S 247481 Candidatus Cardinium hertigii 0.01 11 0 F 89373 Cytophagaceae 0.01 11 0 G 107 Spirosoma 0.01 9 9 S 2666025 Spirosoma endbachense 0.00 1 1 S 1211326 Spirosoma aerolatum 0.00 1 1 S 2735870 Spirosoma taeanense 0.00 5 0 F 1853232 Hymenobacteraceae 0.00 4 1 G 89966 Hymenobacter 0.00 2 2 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 1850093 Hymenobacter nivis 0.00 1 0 G 323449 Pontibacter 0.00 1 1 S 2694929 Pontibacter russatus 0.00 2 0 F 200667 Flammeovirgaceae 0.00 2 0 G 3051458 Chondrinema 0.00 2 2 S 2994555 Chondrinema litorale 0.00 1 0 F 1853234 Persicobacteraceae 0.00 1 0 G 1434007 Fulvitalea 0.00 1 1 S 1182444 Fulvitalea axinellae 0.00 2 0 C 117747 Sphingobacteriia 0.00 2 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 84567 Pedobacter 0.00 1 0 G1 2628915 unclassified Pedobacter 0.00 1 1 S 2856523 Pedobacter sp. D749 0.00 1 0 F 3088888 Aurantibacillaceae 0.00 1 0 G 3088889 Aurantibacillus 0.00 1 1 S 3036359 Aurantibacillus circumpalustris 0.01 16 0 P 1090 Chlorobiota 0.01 16 0 C 191410 Chlorobiia 0.01 16 0 O 191411 Chlorobiales 0.01 15 0 F 2968741 Chloroherpetonaceae 0.01 15 0 G 100715 Chloroherpeton 0.01 15 0 S 100716 Chloroherpeton thalassium 0.01 15 15 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 1 F 191412 Chlorobiaceae 0.00 2 0 P 1853220 Rhodothermota 0.00 2 0 C 1853222 Rhodothermia 0.00 2 0 O 1853224 Rhodothermales 0.00 2 0 F 563843 Rhodothermaceae 0.00 2 0 G 29548 Rhodothermus 0.00 2 2 S 29549 Rhodothermus marinus 0.00 1 0 P 142182 Gemmatimonadota 0.00 1 0 C 219685 Gemmatimonadia 0.00 1 0 O 219686 Gemmatimonadales 0.00 1 0 F 219687 Gemmatimonadaceae 0.00 1 0 G 1706036 Gemmatirosa 0.00 1 1 S 861299 Gemmatirosa kalamazoonensis 0.18 197 0 D1 1783257 PVC group 0.07 74 0 P 74201 Verrucomicrobiota 0.05 50 0 P1 326457 Verrucomicrobiota incertae sedis 0.05 50 0 G 1541670 Methylacidimicrobium 0.05 50 50 G1 2730358 unclassified Methylacidimicrobium 0.01 15 0 C 203494 Verrucomicrobiia 0.01 13 0 O 48461 Verrucomicrobiales 0.01 13 0 F 203557 Verrucomicrobiaceae 0.01 7 0 G 2735 Verrucomicrobium 0.01 7 0 G1 2625155 unclassified Verrucomicrobium 0.01 7 7 S 1882831 Verrucomicrobium sp. GAS474 0.01 6 0 G 2911469 Sulfuriroseicoccus 0.01 6 6 S 2707525 Sulfuriroseicoccus oceanibius 0.00 2 0 O 134621 Limisphaerales 0.00 2 0 F 3050006 Fontisphaeraceae 0.00 2 0 G 3050007 Fontisphaera 0.00 2 2 S 2974023 Fontisphaera persica 0.01 8 1 C 414999 Opitutia 0.01 6 0 O 415001 Puniceicoccales 0.00 5 0 O1 3056381 Puniceicoccales incertae sedis 0.00 5 0 G 3049269 Candidatus Pelagisphaera 0.00 5 5 S 2684113 Candidatus Pelagisphaera phototrophica 0.00 1 0 F 3056371 Coraliomargaritaceae 0.00 1 0 G 442430 Coraliomargarita 0.00 1 0 S 395922 Coraliomargarita akajimensis 0.00 1 1 S1 583355 Coraliomargarita akajimensis DSM 45221 0.00 1 0 O 415000 Opitutales 0.00 1 1 F 134623 Opitutaceae 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.06 68 1 P 203682 Planctomycetota 0.04 45 28 C 203683 Planctomycetia 0.01 8 0 O 2691354 Pirellulales 0.00 4 0 F 2691357 Pirellulaceae 0.00 3 0 G 2714594 Bremerella 0.00 3 0 G1 2795601 unclassified Bremerella 0.00 3 3 S 3026424 Bremerella sp. P1 0.00 1 0 G 123 Pirellula 0.00 1 0 G1 2639138 unclassified Pirellula 0.00 1 1 S 1632865 Pirellula sp. SH-Sr6A 0.00 4 1 F 2691359 Lacipirellulaceae 0.00 2 0 G 2795783 Pirellulimonas 0.00 2 2 S 2528009 Pirellulimonas nuda 0.00 1 0 G 2795781 Aeoliella 0.00 1 1 S 2527972 Aeoliella mucimassa 0.00 4 0 O 2691356 Isosphaerales 0.00 4 2 F 1763524 Isosphaeraceae 0.00 2 0 G 1763521 Paludisphaera 0.00 2 2 S 1387353 Paludisphaera borealis 0.00 3 0 O 2691355 Gemmatales 0.00 3 1 F 1914233 Gemmataceae 0.00 1 0 G 2731450 Limnoglobus 0.00 1 1 S 2598579 Limnoglobus roseus 0.00 1 0 G 2807415 Urbifossiella 0.00 1 1 S 2528023 Urbifossiella limnaea 0.00 2 0 O 112 Planctomycetales 0.00 2 0 F 126 Planctomycetaceae 0.00 2 0 G 118 Planctomyces 0.00 2 0 G1 2648843 unclassified Planctomyces 0.00 1 1 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 S 1636152 Planctomyces sp. SH-PL62 0.02 20 0 C 2897345 Candidatus Uabimicrobiia 0.02 20 0 O 2897347 Candidatus Uabimicrobiales 0.02 20 0 F 2897348 Candidatus Uabimicrobiaceae 0.02 20 0 G 2897349 Candidatus Uabimicrobium 0.02 20 20 S 2596890 Candidatus Uabimicrobium amorphum 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 1771349 Tepidisphaerales 0.00 1 0 F 1771355 Tepidisphaeraceae 0.00 1 0 G 2807511 Humisphaera 0.00 1 1 S 2807512 Humisphaera borealis 0.00 1 0 C 2517206 Candidatus Brocadiia 0.00 1 0 O 1127829 Candidatus Brocadiales 0.00 1 0 F 1127830 Candidatus Brocadiaceae 0.00 1 0 G 380738 Candidatus Kuenenia 0.00 1 1 S 174633 Candidatus Kuenenia stuttgartiensis 0.05 54 0 P 204428 Chlamydiota 0.05 54 52 C 204429 Chlamydiia 0.00 2 0 O 1963360 Parachlamydiales 0.00 2 0 F 92713 Parachlamydiaceae 0.00 2 0 G 282132 Candidatus Protochlamydia 0.00 2 2 S 389348 Candidatus Protochlamydia naegleriophila 0.00 1 0 P 134625 Kiritimatiellota 0.00 1 0 C 2907184 Tichowtungiia 0.00 1 0 O 2907185 Tichowtungiales 0.00 1 0 F 2907186 Tichowtungiaceae 0.00 1 0 G 2907187 Tichowtungia 0.00 1 1 S 2697043 Tichowtungia aerotolerans 0.06 68 0 P 29547 Campylobacterota 0.06 68 0 C 3031852 Epsilonproteobacteria 0.06 68 0 O 213849 Campylobacterales 0.06 64 0 F 2932623 Sulfurospirillaceae 0.06 64 0 G 57665 Sulfurospirillum 0.06 64 0 S 66821 Sulfurospirillum multivorans 0.06 64 64 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 3 2 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 45498 Helicobacter cholecystus 0.00 1 0 F 2771471 Sulfurimonadaceae 0.00 1 0 G 202746 Sulfurimonas 0.00 1 1 G1 2623549 unclassified Sulfurimonas 0.04 39 0 D1 2323 Bacteria incertae sedis 0.04 39 0 D2 1783234 Bacteria candidate phyla 0.03 36 0 D3 95901 Candidatus Dependentiae 0.03 36 0 C 2497643 Candidatus Babeliae 0.03 36 0 O 2497644 Candidatus Babeliales 0.03 36 0 F 2953756 Candidatus Chromulinivoraceae 0.03 36 0 G 2953757 Candidatus Chromulinivorax 0.03 36 36 S 2066483 Candidatus Chromulinivorax destructor 0.00 3 0 P 95818 Candidatus Saccharibacteria 0.00 3 0 C 2093818 Candidatus Saccharimonadia 0.00 2 0 O 2093819 Candidatus Nanosynbacterales 0.00 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 2 2 G 2093823 Candidatus Nanosynbacter 0.00 1 0 O 2093825 Candidatus Saccharimonadales 0.00 1 0 F 2171986 Candidatus Saccharimonadaceae 0.00 1 0 G 1331051 Candidatus Saccharimonas 0.00 1 1 S 1332188 Candidatus Saccharimonas aalborgensis 0.02 24 0 P 32066 Fusobacteriota 0.02 24 0 C 203490 Fusobacteriia 0.02 24 1 O 203491 Fusobacteriales 0.01 12 0 F 203492 Fusobacteriaceae 0.01 12 8 G 848 Fusobacterium 0.00 2 2 S 76857 Fusobacterium polymorphum 0.00 1 0 S 849 Fusobacterium gonidiaformans 0.00 1 1 S1 469615 Fusobacterium gonidiaformans ATCC 25563 0.00 1 1 S 76859 Fusobacterium animalis 0.01 10 0 F 1129771 Leptotrichiaceae 0.01 10 2 G 32067 Leptotrichia 0.00 4 4 S 157691 Leptotrichia shahii 0.00 2 1 G1 2633022 unclassified Leptotrichia 0.00 1 1 S 712362 Leptotrichia sp. oral taxon 221 0.00 1 1 S 157687 Leptotrichia wadei 0.00 1 1 S 554406 Leptotrichia hongkongensis 0.00 1 0 F 3072461 Haliovirgaceae 0.00 1 0 G 3072462 Haliovirga 0.00 1 1 S 2996794 Haliovirga abyssi 0.02 19 0 P 2818505 Myxococcota 0.02 18 0 P1 3031711 Polyangia 0.02 18 0 O 3031712 Polyangiales 0.02 18 0 F 49 Polyangiaceae 0.02 18 0 G 39643 Sorangium 0.02 18 18 S 56 Sorangium cellulosum 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 224458 Pyxidicoccus 0.00 1 1 S 2813578 Pyxidicoccus parkwaysis 0.01 13 0 P 203691 Spirochaetota 0.01 13 0 C 203692 Spirochaetia 0.01 10 0 O 136 Spirochaetales 0.01 6 0 F 2845253 Treponemataceae 0.01 6 1 G 157 Treponema 0.00 3 3 S 409322 Treponema pedis 0.00 2 0 S 88058 Treponema primitia 0.00 2 2 S1 545694 Treponema primitia ZAS-2 0.00 2 0 F 137 Spirochaetaceae 0.00 1 0 G 1616789 Salinispira 0.00 1 1 S 1307761 Salinispira pacifica 0.00 1 0 G 2834378 Entomospira 0.00 1 1 S 2719988 Entomospira entomophila 0.00 1 1 F 1643685 Borreliaceae 0.00 1 0 F 2791015 Sphaerochaetaceae 0.00 1 0 G 3062336 Parasphaerochaeta 0.00 1 0 S 273376 Parasphaerochaeta coccoides 0.00 1 1 S1 760011 Parasphaerochaeta coccoides DSM 17374 0.00 3 0 O 1643688 Leptospirales 0.00 3 0 F 170 Leptospiraceae 0.00 3 0 G 171 Leptospira 0.00 2 2 S 28182 Leptospira noguchii 0.00 1 0 S 172 Leptospira biflexa 0.00 1 1 S1 145259 Leptospira biflexa serovar Patoc 0.01 10 0 P 3018035 Bdellovibrionota 0.01 10 0 C 3031419 Bacteriovoracia 0.01 10 0 O 2024979 Bacteriovoracales 0.00 5 0 F 263369 Bacteriovoracaceae 0.00 4 0 G 146784 Bacteriovorax 0.00 4 4 S 960 Bacteriovorax stolpii 0.00 1 0 G 263370 Peredibacter 0.00 1 1 S 28202 Peredibacter starrii 0.00 5 0 F 1652132 Halobacteriovoraceae 0.00 5 0 G 1652133 Halobacteriovorax 0.00 5 0 G1 2639665 unclassified Halobacteriovorax 0.00 5 5 S 2109558 Halobacteriovorax sp. BALOs_7 0.01 8 0 P 200783 Aquificota 0.01 8 0 C 187857 Aquificia 0.01 8 0 O 32069 Aquificales 0.01 8 0 F 224027 Hydrogenothermaceae 0.01 8 8 G 212790 Sulfurihydrogenibium 0.01 8 0 P 57723 Acidobacteriota 0.00 3 0 C 533205 Holophagae 0.00 2 0 O 533206 Acanthopleuribacterales 0.00 2 0 F 533207 Acanthopleuribacteraceae 0.00 2 0 G 2915177 Sulfidibacter 0.00 2 2 S 2818388 Sulfidibacter corallicola 0.00 1 0 O 2562243 Thermotomaculales 0.00 1 0 F 2562244 Thermotomaculaceae 0.00 1 0 G 1172428 Thermotomaculum 0.00 1 1 S 981385 Thermotomaculum hydrothermale 0.00 3 0 C 1813735 Vicinamibacteria 0.00 3 0 O 2910145 Vicinamibacterales 0.00 3 0 F 2211325 Vicinamibacteraceae 0.00 3 2 G 2004797 Luteitalea 0.00 1 1 S 1855912 Luteitalea pratensis 0.00 2 0 C 204432 Terriglobia 0.00 2 0 O 332160 Bryobacterales 0.00 2 0 F 1962910 Bryobacteraceae 0.00 2 2 G 1649475 Paludibaculum 0.01 6 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 6 0 P 1293497 Nitrospinota 0.01 6 0 C 1293498 Nitrospinia 0.01 6 0 O 1293499 Nitrospinales 0.01 6 0 F 407032 Nitrospinaceae 0.01 6 0 G 35800 Nitrospina 0.01 6 6 S 1323948 Nitrospina watsonii 0.00 3 0 P 200930 Deferribacterota 0.00 3 0 C 68337 Deferribacteres 0.00 3 0 O 191393 Deferribacterales 0.00 2 2 F 2945019 Geovibrionaceae 0.00 1 0 F 2945020 Mucispirillaceae 0.00 1 0 G 248038 Mucispirillum 0.00 1 0 S 248039 Mucispirillum schaedleri 0.00 1 1 S1 1379858 Mucispirillum schaedleri ASF457 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 D1 68525 delta/epsilon subdivisions 0.00 1 0 C 28221 Deltaproteobacteria 0.00 1 0 O 1779134 Bradymonadales 0.00 1 0 F 1779135 Bradymonadaceae 0.00 1 0 G 2766927 Persicimonas 0.00 1 1 S 2292766 Persicimonas caeni 0.00 1 0 P 40117 Nitrospirota 0.00 1 0 C 2811502 Thermodesulfovibrionia 0.00 1 0 O 2811503 Thermodesulfovibrionales 0.00 1 0 F 2811505 Dissulfurispiraceae 0.00 1 0 G 2811506 Dissulfurispira 0.00 1 1 S 2715679 Dissulfurispira thermophila 0.01 8 0 D 2157 Archaea 0.01 8 0 P 28890 Euryarchaeota 0.01 6 0 C 2545688 Candidatus Methanoliparia 0.01 6 0 O 2545689 Candidatus Methanoliparales 0.01 6 0 F 2545690 Candidatus Methanoliparaceae 0.01 6 0 G 2545692 Candidatus Methanoliparum 0.01 6 0 G1 2874847 unclassified Candidatus Methanoliparum 0.01 6 6 S 2874846 Candidatus Methanoliparum sp. LAM-1 0.00 2 0 P1 2290931 Stenosarchaea group 0.00 2 0 C 183963 Halobacteria 0.00 2 0 O 2235 Halobacteriales 0.00 2 0 F 1644061 Natrialbaceae 0.00 1 0 G 3065678 Natronobeatus 0.00 1 1 S 2963433 Natronobeatus ordinarius 0.00 1 0 G 353799 Halostagnicola 0.00 1 0 S 353800 Halostagnicola larsenii 0.00 1 1 S1 797299 Halostagnicola larsenii XH-48 0.03 27 0 D 10239 Viruses 0.02 25 0 D1 2731341 Duplodnaviria 0.02 25 0 K 2731360 Heunggongvirae 0.02 25 0 P 2731618 Uroviricota 0.02 25 0 C 2731619 Caudoviricetes 0.02 25 0 F 2946170 Straboviridae 0.02 25 0 F1 1198136 Tevenvirinae 0.02 25 0 G 10663 Tequatrovirus 0.02 25 0 S 2844199 Tequatrovirus gee4507 0.02 25 25 S1 2502306 Escherichia phage vB_EcoM_G4507 0.00 2 0 C 2840056 Naldaviricetes 0.00 2 0 O 2840070 Lefavirales 0.00 2 0 F 10442 Baculoviridae 0.00 2 0 G 558016 Alphabaculovirus 0.00 2 0 S 3047737 Alphabaculovirus capomonae 0.00 2 2 S1 1850906 Catopsilia pomona nucleopolyhedrovirus