8.60 5857 5857 U 0 unclassified 91.40 62241 56 R 1 root 90.65 61728 3 R1 131567 cellular organisms 90.64 61725 788 D 2 Bacteria 46.93 31959 93 P 1224 Pseudomonadota 23.94 16301 56 C 28216 Betaproteobacteria 14.07 9583 36 O 206351 Neisseriales 14.00 9536 6490 F 481 Neisseriaceae 3.69 2513 618 G 482 Neisseria 1.04 707 616 S 487 Neisseria meningitidis 0.13 91 91 S1 942513 Neisseria meningitidis WUE 2594 0.75 508 508 S 485 Neisseria gonorrhoeae 0.35 241 241 S 495 Neisseria elongata 0.17 118 118 S 28449 Neisseria subflava 0.12 85 85 S 1853278 Neisseria chenwenguii 0.11 72 72 S 486 Neisseria lactamica 0.05 32 0 G1 2623750 unclassified Neisseria 0.03 20 20 S 2912675 Neisseria sp. Dent CA1/247 0.01 8 8 S 655307 Neisseria sp. KEM232 0.01 4 0 S 641148 Neisseria sp. oral taxon 014 0.01 4 4 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.04 28 28 S 267212 Neisseria bacilliformis 0.04 27 27 S 607712 Neisseria shayeganii 0.03 18 0 S 496 Neisseria macacae 0.03 18 18 S1 997348 Neisseria macacae ATCC 33926 0.02 13 13 S 484 Neisseria flavescens 0.02 12 12 S 1470200 Neisseria arctica 0.01 9 9 S 490 Neisseria sicca 0.01 5 5 S 2995413 Neisseria leonii 0.01 5 5 S 2666100 Neisseria brasiliensis 0.01 5 5 S 194197 Neisseria dentiae 0.01 4 4 S 488 Neisseria mucosa 0.00 3 3 S 493 Neisseria canis 0.00 2 2 S 1815583 Neisseria musculi 0.00 1 1 S 1853276 Neisseria weixii 0.51 350 0 G 32257 Kingella 0.49 335 335 S 505 Kingella oralis 0.02 14 14 S 1522312 Kingella negevensis 0.00 1 1 S 502 Kingella denitrificans 0.12 84 0 G 538 Eikenella 0.12 82 82 S 539 Eikenella corrodens 0.00 2 2 S 2528037 Eikenella exigua 0.05 37 37 G 59 Vitreoscilla 0.03 23 0 G 2593687 Aquella 0.03 23 23 S 2067065 Aquella oligotrophica 0.02 15 0 G 334107 Conchiformibius 0.02 15 15 S 153493 Conchiformibius steedae 0.02 13 0 G 2898489 Paralysiella 0.02 13 13 S 2809020 Paralysiella testudinis 0.01 5 1 G 1193515 Snodgrassella 0.01 4 4 S 2946699 Snodgrassella communis 0.01 4 0 G 2944815 Wielerella 0.01 4 4 S 2917790 Wielerella bovis 0.00 1 0 G 71 Simonsiella 0.00 1 1 S 72 Simonsiella muelleri 0.00 1 0 G 212742 Morococcus 0.00 1 1 S 1056807 Morococcus cerebrosus 0.01 5 2 F 1499392 Chromobacteriaceae 0.00 2 2 G 407217 Aquitalea 0.00 1 0 G 400060 Paludibacterium 0.00 1 1 S 1225769 Paludibacterium paludis 0.01 4 0 F 2897176 Aquaspirillaceae 0.01 4 0 G 168470 Laribacter 0.01 4 2 S 168471 Laribacter hongkongensis 0.00 2 2 S1 557598 Laribacter hongkongensis HLHK9 0.00 2 1 F 2897177 Chitinibacteraceae 0.00 1 0 G 240411 Chitinimonas 0.00 1 1 S 2594795 Chitinimonas arctica 9.69 6597 37 O 80840 Burkholderiales 9.39 6395 45 F 119060 Burkholderiaceae 9.03 6151 0 G 47670 Lautropia 9.03 6151 6151 S 47671 Lautropia mirabilis 0.19 128 1 G 32008 Burkholderia 0.11 72 0 G1 111527 pseudomallei group 0.11 72 0 S 28450 Burkholderia pseudomallei 0.10 71 71 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 1 1 S1 320371 Burkholderia pseudomallei 1710a 0.06 41 0 G1 87882 Burkholderia cepacia complex 0.04 29 26 S 152500 Burkholderia dolosa 0.00 3 3 S1 1385930 Burkholderia dolosa PC543 0.01 6 6 S 60552 Burkholderia vietnamiensis 0.01 5 5 S 95485 Burkholderia stabilis 0.00 1 1 S 87883 Burkholderia multivorans 0.02 14 0 G1 2613784 unclassified Burkholderia 0.02 13 13 S 1494466 Burkholderia sp. FERM BP-3421 0.00 1 1 S 2906514 Burkholderia sp. S-53 0.06 38 2 G 48736 Ralstonia 0.05 36 0 G1 3116862 Ralstonia solanacearum species complex 0.05 36 36 S 305 Ralstonia solanacearum 0.02 12 3 G 106589 Cupriavidus 0.01 5 5 S 367825 Cupriavidus malaysiensis 0.00 3 3 S 164546 Cupriavidus taiwanensis 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.01 7 7 G 1810868 Mycoavidus 0.01 6 0 G 44013 Polynucleobacter 0.01 5 5 S 576610 Polynucleobacter necessarius 0.00 1 0 G1 2640945 unclassified Polynucleobacter 0.00 1 1 S 1855910 Polynucleobacter sp. MWH-S4W17 0.00 3 3 G 1822464 Paraburkholderia 0.00 2 1 G 93217 Pandoraea 0.00 1 1 S 93218 Pandoraea apista 0.00 2 1 G 2018044 Candidatus Vallotia 0.00 1 1 S 1177211 Candidatus Vallotia cooleyia 0.00 1 0 G 2038280 Robbsia 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.11 74 9 F 75682 Oxalobacteraceae 0.05 35 0 G 401469 Undibacterium 0.05 35 8 G1 2630295 unclassified Undibacterium 0.04 27 27 S 3048609 Undibacterium sp. CCC3.4 0.02 16 14 G 29580 Janthinobacterium 0.00 2 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 3065910 Janthinobacterium sp. J1-1 0.01 6 3 F1 2895353 Telluria group 0.00 2 0 G 149698 Massilia 0.00 1 1 S 945844 Massilia oculi 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 3123041 Massilia sp. METH4 0.00 1 0 G 1522432 Pseudoduganella 0.00 1 0 G1 2637179 unclassified Pseudoduganella 0.00 1 1 S 2995154 Pseudoduganella sp. SL102 0.01 5 0 G 884214 Candidatus Zinderia 0.01 5 0 G1 3077950 unclassified Candidatus Zinderia 0.01 5 5 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 1 1 G 963 Herbaspirillum 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.00 1 0 G 1229970 Glaciimonas 0.00 1 0 G1 2644401 unclassified Glaciimonas 0.00 1 1 S 2807626 Glaciimonas sp. PAMC28666 0.07 49 2 F 80864 Comamonadaceae 0.03 20 0 G 3051137 Paracidovorax 0.03 20 20 S 80867 Paracidovorax avenae 0.01 10 0 G 219181 Ottowia 0.01 10 0 G1 2645081 unclassified Ottowia 0.01 9 9 S 1658672 Ottowia sp. oral taxon 894 0.00 1 1 S 3081231 Ottowia sp. SB7-C50 0.01 7 2 G 283 Comamonas 0.00 3 3 S 2743470 Comamonas antarctica 0.00 1 1 S 285 Comamonas testosteroni 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.01 5 4 G 80865 Delftia 0.00 1 1 S 180282 Delftia tsuruhatensis 0.00 2 2 G 28065 Rhodoferax 0.00 2 0 G 201096 Alicycliphilus 0.00 2 2 S 179636 Alicycliphilus denitrificans 0.00 1 1 G 34072 Variovorax 0.04 27 6 F 506 Alcaligenaceae 0.01 5 0 G 1472344 Basilea 0.01 5 0 S 1472345 Basilea psittacipulmonis 0.01 5 5 S1 1072685 Basilea psittacipulmonis DSM 24701 0.01 4 1 G 222 Achromobacter 0.00 3 3 S 217204 Achromobacter insolitus 0.00 3 0 G 1100891 Paenalcaligenes 0.00 3 3 S 2980099 Paenalcaligenes faecalis 0.00 2 1 G 517 Bordetella 0.00 1 1 S 463040 Bordetella genomosp. 13 0.00 2 0 G 90243 Oligella 0.00 2 2 S 90244 Oligella ureolytica 0.00 2 0 G 305976 Pusillimonas 0.00 2 0 G1 2640016 unclassified Pusillimonas 0.00 2 2 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 1 0 G 507 Alcaligenes 0.00 1 1 S 511 Alcaligenes faecalis 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 1 0 G 1921582 Orrella 0.00 1 1 S 2163011 Orrella marina 0.01 6 0 O1 224471 Burkholderiales genera incertae sedis 0.01 4 1 G 32012 Thiomonas 0.00 3 0 G1 2625466 unclassified Thiomonas 0.00 3 3 S 1050370 Thiomonas sp. X19 0.00 1 0 G 92793 Aquabacterium 0.00 1 1 S 1296669 Aquabacterium olei 0.00 1 0 G 114248 Tepidimonas 0.00 1 1 S 307486 Tepidimonas taiwanensis 0.01 6 0 F 995019 Sutterellaceae 0.01 6 4 G 40544 Sutterella 0.00 2 2 S 2494234 Sutterella megalosphaeroides 0.00 3 1 F 2975441 Sphaerotilaceae 0.00 1 0 G 93681 Roseateles 0.00 1 1 S 76731 Roseateles depolymerans 0.00 1 1 G 196013 Caldimonas 0.06 43 7 O 32003 Nitrosomonadales 0.03 21 11 F 206379 Nitrosomonadaceae 0.01 10 8 G 914 Nitrosomonas 0.00 2 2 S 44577 Nitrosomonas ureae 0.01 8 6 F 90627 Gallionellaceae 0.00 2 0 G 2249462 Ferrigenium 0.00 2 2 S 1682490 Ferrigenium kumadai 0.01 5 0 F 2008790 Thiobacillaceae 0.01 5 0 G 1938335 Sulfuritortus 0.01 5 5 S 1914471 Sulfuritortus calidifontis 0.00 2 0 F 32011 Methylophilaceae 0.00 2 0 G 404 Methylobacillus 0.00 2 0 S 405 Methylobacillus flagellatus 0.00 2 2 S1 265072 Methylobacillus flagellatus KT 0.03 20 1 C1 119066 Betaproteobacteria incertae sedis 0.02 11 0 G 1301080 Candidatus Nasuia 0.02 11 11 S 1160784 Candidatus Nasuia deltocephalinicola 0.01 6 2 G 1381133 Candidatus Profftella 0.01 4 4 S 669502 Candidatus Profftella armatura 0.00 2 1 G 33055 Candidatus Kinetoplastibacterium 0.00 1 1 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 2 0 O 206389 Rhodocyclales 0.00 2 0 F 75787 Rhodocyclaceae 0.00 1 0 G 83766 Propionivibrio 0.00 1 0 G1 334579 environmental samples 0.00 1 1 S 426737 uncultured Propionivibrio sp. 0.00 1 1 G 146937 Azospira 20.59 14022 186 C 1236 Gammaproteobacteria 16.50 11239 0 O 135614 Lysobacterales 16.49 11231 5 F 32033 Lysobacteraceae 16.47 11217 0 G 338 Xanthomonas 16.47 11217 11217 S 29447 Xanthomonas albilineans 0.01 6 3 G 40323 Stenotrophomonas 0.00 2 0 G1 995085 Stenotrophomonas maltophilia group 0.00 2 2 S 40324 Stenotrophomonas maltophilia 0.00 1 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2770322 Stenotrophomonas sp. 169 0.00 2 2 G 83618 Pseudoxanthomonas 0.00 1 0 G 490567 Arenimonas 0.00 1 1 S 370777 Arenimonas daejeonensis 0.01 8 6 F 1775411 Rhodanobacteraceae 0.00 1 0 G 242605 Luteibacter 0.00 1 1 S 564369 Luteibacter anthropi 0.00 1 0 G 2233801 Ahniella 0.00 1 1 S 2021234 Ahniella affigens 1.80 1227 62 O 91347 Enterobacterales 1.07 730 114 F 543 Enterobacteriaceae 0.29 200 2 G 561 Escherichia 0.28 193 178 S 562 Escherichia coli 0.01 5 5 S1 1322345 Escherichia coli ATCC 25922 0.01 4 4 S1 2079157 Escherichia coli O2:H1 0.00 2 2 S1 2874053 Escherichia coli O25:H1 0.00 2 2 S1 3038394 Escherichia coli O155:H21 0.00 1 1 S1 1446600 Escherichia coli O15:H18 0.00 1 1 S1 362663 Escherichia coli 536 0.01 4 4 S 1499973 Escherichia marmotae 0.00 1 1 S 208962 Escherichia albertii 0.18 120 117 F1 36866 unclassified Enterobacteriaceae 0.00 1 1 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 1 1 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 1 1 S 2675772 Enterobacteriaceae endosymbiont of Donacia bicoloricornis 0.15 105 6 G 590 Salmonella 0.15 99 13 S 28901 Salmonella enterica 0.13 86 7 S1 59201 Salmonella enterica subsp. enterica 0.04 24 24 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.02 17 17 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.02 16 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 10 10 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 6 6 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 4 4 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 4 4 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.01 4 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.01 4 4 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 3 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 3 3 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 2 2 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.12 85 0 G 547 Enterobacter 0.11 78 0 G1 354276 Enterobacter cloacae complex 0.07 46 46 S 299767 Enterobacter ludwigii 0.04 25 25 S 158836 Enterobacter hormaechei 0.01 7 7 S 208224 Enterobacter kobei 0.01 7 7 S 881260 Enterobacter bugandensis 0.10 71 0 F1 2890311 Klebsiella/Raoultella group 0.10 71 1 G 570 Klebsiella 0.09 60 47 S 573 Klebsiella pneumoniae 0.02 13 13 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.01 5 5 S 548 Klebsiella aerogenes 0.01 4 1 S 1463165 Klebsiella quasipneumoniae 0.00 3 3 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 1 S 244366 Klebsiella variicola 0.01 7 0 G 544 Citrobacter 0.01 5 0 G1 1344959 Citrobacter freundii complex 0.00 2 2 S 67827 Citrobacter werkmanii 0.00 2 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 2 2 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 1 1 S 546 Citrobacter freundii 0.00 2 2 S 67824 Citrobacter farmeri 0.01 5 3 G 401618 Candidatus Riesia 0.00 2 2 S 401619 Candidatus Riesia pediculicola 0.01 4 0 F1 191675 Enterobacteriaceae incertae sedis 0.01 4 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 3 0 F3 84564 ant endosymbionts 0.00 3 0 G 203804 Candidatus Blochmanniella 0.00 3 2 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 1 S 2681986 Blochmannia endosymbiont of Camponotus nipponensis 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 0 G 568987 Candidatus Hamiltonella 0.00 1 1 S 138072 Candidatus Hamiltonella defensa 0.00 3 0 G 2815296 Jejubacter 0.00 3 3 S 2579935 Jejubacter calystegiae 0.00 3 0 G 1330547 Kosakonia 0.00 3 3 S 208223 Kosakonia cowanii 0.00 3 0 G 1177214 Candidatus Profftia 0.00 3 0 G1 2735709 unclassified Candidatus Profftia 0.00 3 3 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 3 0 G 620 Shigella 0.00 3 3 S 623 Shigella flexneri 0.00 2 0 G 1335483 Shimwellia 0.00 2 2 S 563 Shimwellia blattae 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 2726810 Scandinavium 0.00 1 1 S 1851514 Scandinavium goeteborgense 0.00 1 0 G 413496 Cronobacter 0.00 1 1 S 413503 Cronobacter malonaticus 0.00 1 0 G 409304 Candidatus Ishikawella 0.00 1 0 S 168169 Candidatus Ishikawella capsulata 0.00 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 1 0 G 83654 Leclercia 0.00 1 1 S 83655 Leclercia adecarboxylata 0.48 324 0 F 1903409 Erwiniaceae 0.46 311 0 G 551 Erwinia 0.45 309 309 S 1922217 Candidatus Erwinia haradaeae 0.00 2 0 G1 2622719 unclassified Erwinia 0.00 2 2 S 215689 Erwinia sp. Ejp617 0.01 8 1 G 53335 Pantoea 0.01 4 4 S 1235990 Candidatus Pantoea carbekii 0.00 2 2 S 59814 Pantoea dispersa 0.00 1 0 G1 1654067 Pantoea agglomerans group 0.00 1 1 S 549 Pantoea agglomerans 0.01 5 0 G 32199 Buchnera 0.01 5 5 S 9 Buchnera aphidicola 0.06 43 4 F 1903414 Morganellaceae 0.02 17 0 G 581 Morganella 0.02 17 17 S 582 Morganella morganii 0.01 10 3 G 637 Arsenophonus 0.00 2 2 S 638 Arsenophonus nasoniae 0.00 2 2 S 634113 Candidatus Arsenophonus lipoptenae 0.00 2 2 S 2879119 Arsenophonus apicola 0.00 1 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 3041619 Arsenophonus sp. aPb 0.01 6 1 G 583 Proteus 0.00 3 3 S 584 Proteus mirabilis 0.00 2 0 S 1574161 Proteus terrae 0.00 2 2 S1 626774 Proteus terrae subsp. cibarius 0.00 3 0 G 586 Providencia 0.00 2 2 S 1715285 Candidatus Providencia siddallii 0.00 1 1 S 588 Providencia stuartii 0.00 2 1 G 626 Xenorhabdus 0.00 1 0 S 40576 Xenorhabdus bovienii 0.00 1 1 S1 406818 Xenorhabdus bovienii SS-2004 0.00 1 1 G 29487 Photorhabdus 0.05 35 0 F 2812006 Bruguierivoracaceae 0.05 35 0 G 84565 Sodalis 0.04 30 30 S 2697027 Sodalis ligni 0.01 4 0 S 1486991 Candidatus Sodalis pierantonius 0.01 4 4 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 1 S 1239307 Sodalis praecaptivus 0.04 28 1 F 1903411 Yersiniaceae 0.03 18 0 G 613 Serratia 0.01 10 10 S 138074 Serratia symbiotica 0.01 4 0 S 82996 Serratia plymuthica 0.01 4 4 S1 1006598 Serratia plymuthica RVH1 0.00 2 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 1 1 S 2785630 Serratia sp. CMO1 0.00 1 1 S 2448483 Serratia sp. 3ACOL1 0.00 2 2 S 61652 Serratia rubidaea 0.01 7 7 G 1927833 Candidatus Fukatsuia 0.00 2 0 G 2716544 Chimaeribacter 0.00 2 2 S 2060066 Chimaeribacter arupi 0.01 5 0 F 1903410 Pectobacteriaceae 0.01 4 0 G 122277 Pectobacterium 0.00 2 2 S 1905730 Pectobacterium parmentieri 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 1 S 2488639 Pectobacterium versatile 0.00 1 0 G 204037 Dickeya 0.00 1 1 S 1089444 Dickeya solani 0.71 485 0 O 135622 Alteromonadales 0.68 466 0 F 267888 Pseudoalteromonadaceae 0.67 458 0 G 2834759 Flocculibacter 0.67 458 458 S 2744479 Flocculibacter collagenilyticus 0.01 8 1 G 53246 Pseudoalteromonas 0.01 7 0 G1 194690 unclassified Pseudoalteromonas 0.01 7 7 S 649161 Pseudoalteromonas sp. 3J6 0.02 11 0 F 267890 Shewanellaceae 0.02 11 3 G 22 Shewanella 0.01 5 5 S 62322 Shewanella baltica 0.00 3 3 G1 196818 unclassified Shewanella 0.00 3 0 F 72275 Alteromonadaceae 0.00 2 0 F1 2903219 Alteromonas/Salinimonas group 0.00 2 0 G 226 Alteromonas 0.00 2 1 G1 2614992 unclassified Alteromonas 0.00 1 1 S 2267264 Alteromonas sp. RKMC-009 0.00 1 1 G 1858563 Alkalimarinus 0.00 3 0 F 267892 Ferrimonadaceae 0.00 3 3 G 44011 Ferrimonas 0.00 2 0 F 267893 Idiomarinaceae 0.00 2 0 G 135575 Idiomarina 0.00 2 0 G1 2614829 unclassified Idiomarina 0.00 2 2 S 2055892 Idiomarina sp. X4 0.41 276 0 O 135625 Pasteurellales 0.41 276 10 F 712 Pasteurellaceae 0.33 228 17 G 724 Haemophilus 0.29 196 196 S 729 Haemophilus parainfluenzae 0.02 13 13 S 735 Haemophilus parahaemolyticus 0.00 2 2 S 727 Haemophilus influenzae 0.03 23 19 G 416916 Aggregatibacter 0.00 2 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 1 1 S1 272556 Aggregatibacter actinomycetemcomitans HK1651 0.00 2 0 G1 2639383 unclassified Aggregatibacter 0.00 2 2 S 2866570 Aggregatibacter sp. Marseille-P9115 0.01 4 2 G 713 Actinobacillus 0.00 2 0 S 718 Actinobacillus equuli 0.00 2 2 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 0 G 745 Pasteurella 0.00 2 1 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.00 2 0 G 1249016 Otariodibacter 0.00 2 2 S 1032623 Otariodibacter oris 0.00 2 0 G 2899790 Mergibacter 0.00 2 2 S 221402 Mergibacter septicus 0.00 1 0 G 75984 Mannheimia 0.00 1 1 S 85404 Mannheimia varigena 0.00 1 0 G 155493 Gallibacterium 0.00 1 1 S 505341 Gallibacterium salpingitidis 0.00 1 0 G 1520333 Vespertiliibacter 0.00 1 1 S 1443036 Vespertiliibacter pulmonis 0.00 1 0 G 1960084 Rodentibacter 0.00 1 1 S 2778911 Rodentibacter haemolyticus 0.00 1 0 G 2094023 Glaesserella 0.00 1 1 S 738 Glaesserella parasuis 0.36 247 0 O 135615 Cardiobacteriales 0.36 247 1 F 868 Cardiobacteriaceae 0.35 240 6 G 2717 Cardiobacterium 0.23 160 0 G1 2648856 unclassified Cardiobacterium 0.23 160 160 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.11 74 74 S 2718 Cardiobacterium hominis 0.01 6 0 G 13275 Suttonella 0.01 6 0 G1 2908647 unclassified Suttonella 0.01 6 6 S 2908648 Suttonella sp. R2A3 0.22 153 0 O 135623 Vibrionales 0.22 153 4 F 641 Vibrionaceae 0.20 138 110 G 662 Vibrio 0.01 8 8 S 666 Vibrio cholerae 0.01 6 1 G1 2614977 unclassified Vibrio 0.00 2 2 S 2661921 Vibrio sp. THAF191c 0.00 2 2 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2751179 Vibrio sp. B1REV9 0.01 4 0 G1 717610 Vibrio harveyi group 0.00 3 3 S 669 Vibrio harveyi 0.00 1 1 S 670 Vibrio parahaemolyticus 0.01 4 4 S 2572923 Vibrio taketomensis 0.00 3 0 S 52443 Vibrio tapetis 0.00 3 3 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 0 S 672 Vibrio vulnificus 0.00 1 1 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 1 S 104609 Vibrio penaeicida 0.00 1 1 S 29495 Vibrio navarrensis 0.02 11 5 G 657 Photobacterium 0.01 6 5 S 553611 Photobacterium leiognathi 0.00 1 1 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.11 73 0 O 72274 Pseudomonadales 0.10 71 3 F 135621 Pseudomonadaceae 0.09 60 35 G 286 Pseudomonas 0.01 9 1 G1 196821 unclassified Pseudomonas 0.00 1 1 S 2705472 Pseudomonas sp. MTM4 0.00 1 1 S 3119004 Pseudomonas sp. TE3-3-F2023 0.00 1 1 S 2931382 Pseudomonas sp. PIA16 0.00 1 1 S 3077589 Pseudomonas sp. DTU_2021_1001937_2_SI_NGA_ILE_001 0.00 1 1 S 2954092 Pseudomonas sp. FP2335 0.00 1 1 S 658630 Pseudomonas sp. CMR5c 0.00 1 1 S 2954094 Pseudomonas sp. FP453 0.00 1 1 S 2883205 Pseudomonas sp. L5B5 0.01 7 0 G1 136841 Pseudomonas aeruginosa group 0.01 7 7 S 287 Pseudomonas aeruginosa 0.00 3 0 G1 136845 Pseudomonas putida group 0.00 3 3 S 303 Pseudomonas putida 0.00 1 1 S 485880 Pseudomonas kurunegalensis 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 0 G1 136843 Pseudomonas fluorescens group 0.00 1 0 S 47883 Pseudomonas synxantha 0.00 1 1 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 122355 Pseudomonas psychrophila 0.00 1 1 S 46677 Pseudomonas agarici 0.00 1 1 S 364197 Pseudomonas pohangensis 0.01 4 0 G 2901189 Halopseudomonas 0.01 4 4 S 1931241 Halopseudomonas phragmitis 0.00 2 0 G 2901164 Stutzerimonas 0.00 2 0 G1 136846 Stutzerimonas stutzeri group 0.00 2 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 2 2 S 316 Stutzerimonas stutzeri 0.00 1 0 G 1649479 Permianibacter 0.00 1 1 S 1510150 Permianibacter aggregans 0.00 1 0 G 1654787 Thiopseudomonas 0.00 1 1 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F 3085095 Pseudohongiellaceae 0.00 1 0 G 1524249 Pseudohongiella 0.00 1 1 S 1249552 Pseudohongiella spirulinae 0.00 1 0 F 3085096 Ketobacteraceae 0.00 1 0 G 2025617 Ketobacter 0.00 1 1 S 1917421 Ketobacter alkanivorans 0.05 35 0 O 2887326 Moraxellales 0.05 35 0 F 468 Moraxellaceae 0.04 26 11 G 469 Acinetobacter 0.01 7 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.01 5 5 S 470 Acinetobacter baumannii 0.00 2 1 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.01 4 4 S 202956 Acinetobacter towneri 0.00 1 1 S 28090 Acinetobacter lwoffii 0.00 1 1 S 106648 Acinetobacter bereziniae 0.00 1 1 S 108981 Acinetobacter schindleri 0.00 1 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.01 6 6 G 475 Moraxella 0.00 3 2 G 497 Psychrobacter 0.00 1 0 G1 196806 unclassified Psychrobacter 0.00 1 1 S 1415574 Psychrobacter sp. LV10R520-6 0.03 23 0 O 135624 Aeromonadales 0.03 23 0 F 84642 Aeromonadaceae 0.03 21 2 G 642 Aeromonas 0.02 14 14 S 650 Aeromonas jandaei 0.00 3 3 S 654 Aeromonas veronii 0.00 2 2 S 644 Aeromonas hydrophila 0.00 1 0 G 225143 Oceanisphaera 0.00 1 1 S 1903694 Oceanisphaera avium 0.00 1 0 G 2802288 Dongshaea 0.00 1 1 S 2047966 Dongshaea marina 0.03 20 0 O 72273 Thiotrichales 0.01 9 0 F 135617 Thiotrichaceae 0.01 5 0 G 1021 Beggiatoa 0.01 5 5 S 288004 Beggiatoa leptomitoformis 0.01 4 4 G 1030 Thiothrix 0.01 6 0 F 2056687 Fastidiosibacteraceae 0.01 6 0 G 2056696 Cysteiniphilum 0.01 6 0 G1 2610889 unclassified Cysteiniphilum 0.01 6 6 S 2975055 Cysteiniphilum sp. QT6929 0.01 5 1 F 135616 Piscirickettsiaceae 0.00 3 2 G 2039723 Thiomicrorhabdus 0.00 1 1 S 2580412 Thiomicrorhabdus sediminis 0.00 1 1 G 34067 Cycloclasticus 0.02 15 0 O 135613 Chromatiales 0.02 14 0 F 1046 Chromatiaceae 0.01 5 0 G 2828366 Caldichromatium 0.01 5 5 S 2699430 Caldichromatium japonicum 0.00 3 0 G 67575 Rheinheimera 0.00 3 0 G1 115860 unclassified Rheinheimera 0.00 2 2 S 1763998 Rheinheimera sp. F8 0.00 1 1 S 3072790 Rheinheimera sp. MMS21-TC3 0.00 2 0 G 85073 Thermochromatium 0.00 2 0 S 1050 Thermochromatium tepidum 0.00 2 2 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 1 1 G 1056 Thiocapsa 0.00 1 0 G 13724 Thiocystis 0.00 1 0 S 73141 Thiocystis violascens 0.00 1 1 S1 765911 Thiocystis violascens DSM 198 0.00 1 0 G 85072 Allochromatium 0.00 1 1 S 553982 Allochromatium tepidum 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.00 1 0 F 255526 Halothiobacillaceae 0.00 1 1 G 109262 Halothiobacillus 0.02 12 0 O 135618 Methylococcales 0.02 11 2 F 403 Methylococcaceae 0.01 5 0 G 39773 Methylomicrobium 0.01 5 0 S 39775 Methylomicrobium album 0.01 5 5 S1 686340 Methylomicrobium album BG8 0.00 2 1 G 416 Methylomonas 0.00 1 1 S 3058963 Methylomonas montana 0.00 2 0 G 1808977 Candidatus Methylospira 0.00 2 2 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 F 1486721 Methylothermaceae 0.00 1 1 G 1486720 Methylomarinovum 0.01 9 0 O 135619 Oceanospirillales 0.01 5 0 F 28256 Halomonadaceae 0.00 2 0 F1 114403 Zymobacter group 0.00 2 0 G 235572 Candidatus Portiera 0.00 2 2 S 91844 Candidatus Portiera aleyrodidarum 0.00 2 1 G 504090 Kushneria 0.00 1 1 S 657387 Kushneria phosphatilytica 0.00 1 0 G 2745 Halomonas 0.00 1 1 S 3031727 Halomonas piscis 0.00 2 1 F 135620 Oceanospirillaceae 0.00 1 0 G 267849 Nitrincola 0.00 1 1 S 2614693 Nitrincola iocasae 0.00 1 1 F 224372 Alcanivoracaceae 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.01 7 0 O 1240482 Orbales 0.01 7 1 F 1240483 Orbaceae 0.01 4 0 G 2894762 Zophobihabitans 0.01 4 4 S 1635327 Zophobihabitans entericus 0.00 2 2 G 1193503 Gilliamella 0.01 6 0 O 1706369 Cellvibrionales 0.01 4 1 F 1706372 Halieaceae 0.00 3 0 G 3040948 Candidatus Paraluminiphilus 0.00 3 3 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 2 0 F 1706371 Cellvibrionaceae 0.00 2 0 G 10 Cellvibrio 0.00 2 0 G1 2624793 unclassified Cellvibrio 0.00 2 2 S 1987723 Cellvibrio sp. PSBB006 0.01 4 0 O 118969 Legionellales 0.01 4 1 F 118968 Coxiellaceae 0.00 1 0 G 776 Coxiella 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.00 1 0 G 254245 Aquicella 0.00 1 1 S 254247 Aquicella siphonis 0.00 3 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 2 0 G 2738850 Candidatus Reidiella 0.00 2 2 S 2738883 Candidatus Reidiella endopervernicosa 0.00 1 0 G 1076625 Candidatus Steffania 0.00 1 1 S 1076626 Candidatus Steffania adelgidicola 0.00 1 0 O 1775403 Nevskiales 0.00 1 1 F 568386 Nevskiaceae 0.00 1 0 O 2975284 Candidatus Comchoanobacterales 0.00 1 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 1 0 G 2975286 Candidatus Comchoanobacter 0.00 1 1 S 2919598 Candidatus Comchoanobacter bicostacola 2.27 1543 15 C 28211 Alphaproteobacteria 1.76 1201 7 O 204441 Rhodospirillales 1.66 1130 0 F 2844601 Stellaceae 1.66 1130 0 G 93 Stella 1.66 1130 1130 S 94 Stella humosa 0.09 61 2 F 433 Acetobacteraceae 0.07 49 0 G 1434011 Komagataeibacter 0.07 49 49 S 215221 Komagataeibacter rhaeticus 0.01 8 0 G 512381 Acidisoma 0.01 8 0 G1 2634065 unclassified Acidisoma 0.01 8 8 S 3040935 Acidisoma sp. PAMC 29798 0.00 1 0 G 35812 Roseococcus 0.00 1 1 S 2771361 Roseococcus microcysteis 0.00 1 0 G 504465 Rhodovastum 0.00 1 1 S 504468 Rhodovastum atsumiense 0.00 3 0 F 41295 Rhodospirillaceae 0.00 3 0 G 111830 Defluviicoccus 0.00 3 3 S 111831 Defluviicoccus vanus 0.39 265 4 O 356 Hyphomicrobiales 0.18 124 0 F 82115 Rhizobiaceae 0.18 124 115 F1 227290 Rhizobium/Agrobacterium group 0.01 8 0 G 379 Rhizobium 0.01 8 0 S 384 Rhizobium leguminosarum 0.01 8 2 S1 386 Rhizobium leguminosarum bv. trifolii 0.01 6 6 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 1 0 G 1612611 Pararhizobium 0.00 1 0 G1 2643050 unclassified Pararhizobium 0.00 1 1 S 3067904 Pararhizobium sp. IMCC3301 0.18 123 59 F 119045 Methylobacteriaceae 0.09 59 42 G 407 Methylobacterium 0.02 11 10 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 2202826 Methylobacterium sp. 17Sr1-1 0.01 5 5 S 410 Methylobacterium organophilum 0.00 1 0 S 31998 Methylobacterium radiotolerans 0.00 1 1 S1 426355 Methylobacterium radiotolerans JCM 2831 0.01 5 3 G 186650 Microvirga 0.00 2 2 S 2651334 Microvirga thermotolerans 0.00 2 0 F 2831100 Boseaceae 0.00 2 1 G 85413 Bosea 0.00 1 0 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.00 1 1 S 1842539 Bosea sp. RAC05 0.00 2 0 F 41294 Nitrobacteraceae 0.00 2 0 G 374 Bradyrhizobium 0.00 1 1 S 1419277 Bradyrhizobium brasilense 0.00 1 1 G1 2631580 unclassified Bradyrhizobium 0.00 2 0 F 45404 Beijerinckiaceae 0.00 2 1 G 120652 Methylocella 0.00 1 1 S 227605 Methylocella tundrae 0.00 2 0 F 772 Bartonellaceae 0.00 2 0 G 773 Bartonella 0.00 2 2 S 2267275 Bartonella krasnovii 0.00 1 0 F 2831106 Devosiaceae 0.00 1 0 G 1082930 Pelagibacterium 0.00 1 1 S 531813 Pelagibacterium halotolerans 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 0 G 2911176 Aquibium 0.00 1 1 S 1670800 Aquibium oceanicum 0.00 1 1 F 2821832 Stappiaceae 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 212791 Enhydrobacter 0.00 1 0 G1 2632691 unclassified Enhydrobacter 0.00 1 1 S 1894999 Enhydrobacter sp. 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 F 2723775 Lichenihabitantaceae 0.00 1 0 G 2723776 Lichenihabitans 0.00 1 0 G1 2880931 unclassified Lichenihabitans 0.00 1 1 S 2880932 Lichenihabitans sp. PAMC28606 0.06 38 0 O 204458 Caulobacterales 0.06 38 0 F 76892 Caulobacteraceae 0.05 37 0 G 41275 Brevundimonas 0.05 37 0 G1 2622653 unclassified Brevundimonas 0.05 37 37 S 2560058 Brevundimonas sp. Bb-A 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 155892 Caulobacter vibrioides 0.01 9 1 O 204457 Sphingomonadales 0.01 7 0 F 41297 Sphingomonadaceae 0.01 6 1 G 13687 Sphingomonas 0.01 5 0 G1 196159 unclassified Sphingomonas 0.00 3 3 S 2596913 Sphingomonas sp. NBWT7 0.00 1 1 S 2942996 Sphingomonas sp. KRR8 0.00 1 1 S 3062169 Sphingomonas sp. C3-2 0.00 1 1 G 165696 Novosphingobium 0.00 1 0 F 335929 Erythrobacteraceae 0.00 1 0 G 1295327 Croceicoccus 0.00 1 1 S 1348774 Croceicoccus naphthovorans 0.01 8 2 O 204455 Rhodobacterales 0.01 5 0 F 31989 Paracoccaceae 0.00 3 0 G 204456 Gemmobacter 0.00 3 3 S 2840474 Gemmobacter fulvus 0.00 2 0 G 265 Paracoccus 0.00 1 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 1 1 S 3030011 Paracoccus sp. S3-43 0.00 1 1 S 1945662 Paracoccus contaminans 0.00 1 1 F 2854170 Roseobacteraceae 0.01 6 0 O 766 Rickettsiales 0.01 5 0 F 942 Anaplasmataceae 0.00 3 0 G 2883098 Candidatus Mesenet 0.00 3 3 G1 3066220 unclassified Candidatus Mesenet 0.00 2 2 G 768 Anaplasma 0.00 1 0 F 775 Rickettsiaceae 0.00 1 0 F1 33988 Rickettsieae 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2601651 Candidatus Nesciobacter 0.00 1 1 S 2601668 Candidatus Nesciobacter abundans 32.39 22057 238 D1 1783272 Terrabacteria group 20.60 14026 66 P 1239 Bacillota 17.56 11958 850 C 91061 Bacilli 13.31 9064 112 O 186826 Lactobacillales 11.30 7696 2 F 1300 Streptococcaceae 11.27 7675 6023 G 1301 Streptococcus 0.40 274 169 S 1308 Streptococcus thermophilus 0.13 88 88 S1 767463 Streptococcus thermophilus ND03 0.02 16 16 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 1435981 Streptococcus thermophilus 1F8CT 0.29 200 141 S 1313 Streptococcus pneumoniae 0.06 40 40 S1 1159083 Streptococcus pneumoniae PCS8235 0.02 16 16 S1 869311 Streptococcus pneumoniae SPN032672 0.00 3 3 S1 516950 Streptococcus pneumoniae CGSP14 0.27 181 162 S 1311 Streptococcus agalactiae 0.03 19 19 S1 1203670 Streptococcus agalactiae GD201008-001 0.25 173 173 S 68892 Streptococcus infantis 0.24 163 158 S 1314 Streptococcus pyogenes 0.01 4 0 S1 301449 Streptococcus pyogenes serotype M5 0.01 4 4 S2 160491 Streptococcus pyogenes str. Manfredo 0.00 1 0 S1 301447 Streptococcus pyogenes serotype M1 0.00 1 1 S2 160490 Streptococcus pyogenes M1 GAS 0.13 91 91 S 2490633 Streptococcus periodonticum 0.10 71 20 G1 2608887 unclassified Streptococcus 0.02 15 15 S 2664091 Streptococcus sp. zg-86 0.02 13 13 S 3028082 Streptococcus sp. 29896 0.01 8 8 S 2975324 Streptococcus sp. FSL R7-0248 0.01 7 7 S 3231906 Streptococcus sp. ZY19097 0.01 6 6 S 3098075 Streptococcus sp. S1 0.00 1 1 S 712624 Streptococcus sp. oral taxon 064 0.00 1 1 S 3038077 Streptococcus sp. D7B5 0.07 51 0 G1 671232 Streptococcus anginosus group 0.05 35 35 S 1328 Streptococcus anginosus 0.02 16 16 S 1338 Streptococcus intermedius 0.07 45 45 S 1345 Streptococcus ferus 0.06 40 40 S 1304 Streptococcus salivarius 0.05 33 33 S 1111760 Streptococcus troglodytae 0.04 29 0 G1 119603 Streptococcus dysgalactiae group 0.02 15 1 S 1334 Streptococcus dysgalactiae 0.02 11 8 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 2 2 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.00 1 1 S2 759913 Streptococcus dysgalactiae subsp. equisimilis AC-2713 0.00 3 3 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.02 14 14 S 1336 Streptococcus equi 0.04 29 29 S 1341 Streptococcus ratti 0.04 28 28 S 1310 Streptococcus sobrinus 0.04 28 28 S 1326 Streptococcus acidominimus 0.04 27 27 S 1348 Streptococcus parauberis 0.04 27 27 S 82348 Streptococcus pluranimalium 0.04 24 21 S 1307 Streptococcus suis 0.00 3 3 S1 1340847 Streptococcus suis T15 0.03 23 23 S 1305 Streptococcus sanguinis 0.03 23 15 S 1303 Streptococcus oralis 0.01 8 8 S1 1458253 Streptococcus oralis subsp. dentisani 0.02 15 15 S 1346 Streptococcus iniae 0.02 13 13 S 1811193 Streptococcus pantholopis 0.02 11 11 S 102886 Streptococcus didelphis 0.02 11 11 S 28037 Streptococcus mitis 0.01 8 8 S 1302 Streptococcus gordonii 0.01 7 7 S 33040 Streptococcus milleri 0.01 7 7 S 2173853 Streptococcus chenjunshii 0.01 6 6 S 2021971 Streptococcus respiraculi 0.01 5 5 S 1335 Streptococcus equinus 0.01 4 4 S 2686210 Streptococcus ruminicola 0.00 3 3 S 59310 Streptococcus macedonicus 0.00 2 2 S 400065 Streptococcus merionis 0.02 17 5 G 1357 Lactococcus 0.01 7 7 S 1366 Lactococcus raffinolactis 0.00 2 0 S 1363 Lactococcus garvieae 0.00 2 2 S1 1890280 Lactococcus garvieae subsp. garvieae 0.00 1 1 S 1358 Lactococcus lactis 0.00 1 1 S 1359 Lactococcus cremoris 0.00 1 1 S 1151742 Lactococcus taiwanensis 0.00 2 0 G 1930830 Floricoccus 0.00 2 2 S 1859475 Floricoccus penangensis 0.87 591 0 F 81852 Enterococcaceae 0.83 566 9 G 1350 Enterococcus 0.39 266 263 S 1351 Enterococcus faecalis 0.00 3 3 S1 1201292 Enterococcus faecalis ATCC 29212 0.37 252 252 S 1352 Enterococcus faecium 0.04 28 26 S 1354 Enterococcus hirae 0.00 2 2 S1 768486 Enterococcus hirae ATCC 9790 0.01 5 5 S 44008 Enterococcus cecorum 0.01 4 2 S 37734 Enterococcus casseliflavus 0.00 2 2 S1 565655 Enterococcus casseliflavus EC20 0.00 2 2 S 1353 Enterococcus gallinarum 0.04 25 1 G 51668 Tetragenococcus 0.04 24 24 S 51669 Tetragenococcus halophilus 0.53 360 48 F 33958 Lactobacillaceae 0.11 72 6 G 1578 Lactobacillus 0.04 29 0 G1 2620435 unclassified Lactobacillus 0.04 25 25 S 1545702 Lactobacillus sp. wkB8 0.00 3 3 S 2695882 Lactobacillus sp. 3B(2020) 0.00 1 1 S 2879107 Lactobacillus sp. IBH004 0.03 23 14 S 1584 Lactobacillus delbrueckii 0.01 5 5 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.01 4 1 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 2 2 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 1 1 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.01 7 4 S 1579 Lactobacillus acidophilus 0.00 3 3 S1 272621 Lactobacillus acidophilus NCFM 0.01 6 6 S 1587 Lactobacillus helveticus 0.00 1 1 S 33959 Lactobacillus johnsonii 0.07 51 0 G 2767842 Lactiplantibacillus 0.06 38 38 S 1589 Lactiplantibacillus pentosus 0.02 13 8 S 1590 Lactiplantibacillus plantarum 0.01 5 5 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.06 40 0 G 2930384 Periweissella 0.06 40 40 S 2506420 Periweissella cryptocerci 0.04 29 0 G 2767886 Levilactobacillus 0.04 26 26 S 1580 Levilactobacillus brevis 0.00 3 3 S 2292255 Levilactobacillus suantsaii 0.04 28 28 G 2767893 Lentilactobacillus 0.02 17 5 G 2767887 Ligilactobacillus 0.01 6 6 S 1624 Ligilactobacillus salivarius 0.00 2 2 S 1605 Ligilactobacillus animalis 0.00 2 2 S 89059 Ligilactobacillus acidipiscis 0.00 1 1 S 1601 Ligilactobacillus agilis 0.00 1 1 S 1606 Ligilactobacillus aviarius 0.02 17 14 G 46255 Weissella 0.00 2 2 S 137591 Weissella cibaria 0.00 1 1 S 1249 Weissella paramesenteroides 0.02 16 0 G 2759736 Lacticaseibacillus 0.02 12 11 S 1597 Lacticaseibacillus paracasei 0.00 1 1 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.00 3 3 S 3025672 Lacticaseibacillus pabuli 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.02 11 0 G 2742598 Limosilactobacillus 0.01 9 9 S 1598 Limosilactobacillus reuteri 0.00 2 2 S 1613 Limosilactobacillus fermentum 0.02 11 0 G 2767881 Fructilactobacillus 0.02 11 11 S 1625 Fructilactobacillus sanfranciscensis 0.01 4 2 G 2767889 Loigolactobacillus 0.00 2 2 S 1610 Loigolactobacillus coryniformis 0.01 4 0 G 2767874 Acetilactobacillus 0.01 4 4 S 1720083 Acetilactobacillus jinshanensis 0.00 3 0 G 2767878 Bombilactobacillus 0.00 3 3 S 1303590 Bombilactobacillus bombi 0.00 3 0 G 2767885 Latilactobacillus 0.00 3 3 S 1599 Latilactobacillus sakei 0.00 2 2 G 2767877 Apilactobacillus 0.00 1 0 G 2767890 Paucilactobacillus 0.00 1 1 S 1296540 Paucilactobacillus nenjiangensis 0.00 1 0 G 2767882 Furfurilactobacillus 0.00 1 1 S 231049 Furfurilactobacillus rossiae 0.00 1 0 G 2767876 Amylolactobacillus 0.00 1 0 S 1603 Amylolactobacillus amylophilus 0.00 1 1 S1 1423721 Amylolactobacillus amylophilus DSM 20533 = JCM 1125 0.00 1 1 G 1243 Leuconostoc 0.38 259 5 F 186828 Carnobacteriaceae 0.33 222 0 G 117563 Granulicatella 0.26 177 177 S 46124 Granulicatella adiacens 0.07 45 45 S 137732 Granulicatella elegans 0.01 10 10 G 29393 Dolosigranulum 0.01 10 0 G 191769 Marinilactibacillus 0.01 10 0 G1 2632303 unclassified Marinilactibacillus 0.01 10 10 S 1911586 Marinilactibacillus sp. 15R 0.01 6 5 G 2747 Carnobacterium 0.00 1 0 S 2751 Carnobacterium maltaromaticum 0.00 1 1 S1 1234679 Carnobacterium maltaromaticum LMA28 0.00 3 0 G 82800 Desemzia 0.00 3 3 S 82801 Desemzia incerta 0.00 2 1 G 1470540 Jeotgalibaca 0.00 1 1 S 1868793 Jeotgalibaca porci 0.00 1 0 G 82802 Trichococcus 0.00 1 0 G1 189664 environmental samples 0.00 1 1 S 189665 uncultured Trichococcus sp. 0.07 46 3 F 186827 Aerococcaceae 0.03 19 15 G 1375 Aerococcus 0.00 3 3 S 3078812 Aerococcus tenax 0.00 1 1 S 87541 Aerococcus christensenii 0.02 13 0 G 46123 Abiotrophia 0.02 13 0 S 46125 Abiotrophia defectiva 0.02 13 13 S1 592010 Abiotrophia defectiva ATCC 49176 0.01 7 0 G 2862144 Ruoffia 0.01 7 7 S 87458 Ruoffia tabacinasalis 0.00 3 0 G 66831 Facklamia 0.00 3 3 S 178214 Facklamia hominis 0.00 1 1 G 13075 Globicatella 3.00 2044 88 O 1385 Bacillales 1.52 1034 32 F 186817 Bacillaceae 1.28 869 18 G 1386 Bacillus 0.97 660 11 G1 653685 Bacillus subtilis group 0.85 579 4 G2 1938374 Bacillus amyloliquefaciens group 0.77 526 525 S 492670 Bacillus velezensis 0.00 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.07 48 45 S 1390 Bacillus amyloliquefaciens 0.00 3 3 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 1 1 S 659243 Bacillus siamensis 0.06 39 31 S 1423 Bacillus subtilis 0.01 5 5 S1 135461 Bacillus subtilis subsp. subtilis 0.00 3 3 S1 86029 Bacillus subtilis subsp. natto 0.02 17 17 S 1648923 Bacillus paralicheniformis 0.01 7 5 S 1452 Bacillus atrophaeus 0.00 2 2 S1 1529886 Bacillus atrophaeus subsp. globigii 0.01 4 0 G2 653388 Bacillus mojavensis subgroup 0.01 4 4 S 260554 Bacillus halotolerans 0.00 1 1 S 1402 Bacillus licheniformis 0.00 1 1 S 96241 Bacillus spizizenii 0.00 1 1 S 483913 Bacillus inaquosorum 0.20 137 3 G1 86661 Bacillus cereus group 0.07 48 43 S 1428 Bacillus thuringiensis 0.01 4 4 S1 180850 Bacillus thuringiensis serovar indiana 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.05 35 19 S 1396 Bacillus cereus 0.01 9 9 S1 1454382 Bacillus cereus D17 0.01 4 4 S1 1003239 Bacillus cereus C1L 0.00 2 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 2 2 S2 637380 Bacillus cereus biovar anthracis str. CI 0.00 1 1 S1 526991 Bacillus cereus AH676 0.03 19 19 S 1392 Bacillus anthracis 0.02 13 0 G2 2750818 unclassified Bacillus cereus group 0.02 13 13 S 1892404 Bacillus sp. ABP14 0.01 8 8 S 2026191 Bacillus luti 0.01 7 7 S 64104 Bacillus pseudomycoides 0.00 2 2 S 2026186 Bacillus paranthracis 0.00 2 1 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.03 23 0 G1 1792192 Bacillus altitudinis complex 0.03 23 23 S 293387 Bacillus altitudinis 0.03 22 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.02 14 14 S 2874284 Bacillus sp. CRB-7 0.01 5 5 S 467262 Bacillus sp. T3 0.00 1 1 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2709784 Bacillus sp. KH172YL63 0.00 1 1 S 3129297 Bacillus sp. FJAT-52991 0.01 6 6 S 1408 Bacillus pumilus 0.00 2 2 S 561879 Bacillus safensis 0.00 1 1 S 2672567 Bacillus aquiflavi 0.07 48 0 G 84406 Virgibacillus 0.07 48 48 S 447199 Virgibacillus salarius 0.03 18 0 G 2800373 Priestia 0.02 17 16 S 1404 Priestia megaterium 0.00 1 1 S1 1006007 Priestia megaterium WSH-002 0.00 1 1 S 412384 Priestia aryabhattai 0.02 11 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.02 11 0 S 86665 Halalkalibacterium halodurans 0.02 11 11 S1 272558 Halalkalibacterium halodurans C-125 0.01 9 1 G 2837504 Heyndrickxia 0.01 8 8 S 1398 Heyndrickxia coagulans 0.01 9 0 G 2837506 Niallia 0.01 9 0 G1 2837522 unclassified Niallia 0.01 9 9 S 3082444 Niallia sp. XMNu-256 0.01 8 0 G 175304 Lentibacillus 0.01 6 0 G1 2614679 unclassified Lentibacillus 0.01 6 6 S 2518176 Lentibacillus sp. CBA3610 0.00 2 2 S 1472767 Lentibacillus amyloliquefaciens 0.01 5 1 G 129337 Geobacillus 0.00 2 2 S 1921421 Geobacillus genomosp. 3 0.00 1 0 S 33940 Geobacillus thermodenitrificans 0.00 1 1 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 1 1 S 860353 Geobacillus proteiniphilus 0.01 5 0 G 2005375 Alkalicoccus 0.01 5 5 S 1667239 Alkalicoccus halolimnae 0.01 4 0 G 2675230 Cytobacillus 0.01 4 4 S 665099 Cytobacillus oceanisediminis 0.01 4 1 G 400634 Lysinibacillus 0.00 1 1 S 1421 Lysinibacillus sphaericus 0.00 1 1 S 28031 Lysinibacillus fusiformis 0.00 1 0 G1 2636778 unclassified Lysinibacillus 0.00 1 1 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 3 0 G 2685905 Salicibibacter 0.00 3 3 S 2743001 Salicibibacter cibi 0.00 3 0 G 45667 Halobacillus 0.00 2 2 S 45668 Halobacillus litoralis 0.00 1 1 S 2932257 Halobacillus salinarum 0.00 2 0 G 1906945 Parageobacillus 0.00 2 2 S 153151 Parageobacillus toebii 0.00 1 0 G 459532 Terribacillus 0.00 1 1 S 361277 Terribacillus saccharophilus 0.00 1 0 G 2785518 Radiobacillus 0.00 1 1 S 2594883 Radiobacillus deserti 0.00 1 0 G 2675229 Peribacillus 0.00 1 1 S 264697 Peribacillus muralis 0.00 1 1 G 150247 Anoxybacillus 0.83 565 1 F 90964 Staphylococcaceae 0.82 561 25 G 1279 Staphylococcus 0.65 444 440 S 1280 Staphylococcus aureus 0.01 4 4 S1 1229492 Staphylococcus aureus 08BA02176 0.06 39 39 S 70255 Staphylococcus condimenti 0.02 17 17 S 1282 Staphylococcus epidermidis 0.01 10 10 S 1283 Staphylococcus haemolyticus 0.01 9 9 S 28035 Staphylococcus lugdunensis 0.01 7 7 S 1286 Staphylococcus simulans 0.01 4 4 S 29378 Staphylococcus arlettae 0.00 2 0 G1 2815305 Staphylococcus intermedius group 0.00 2 2 S 283734 Staphylococcus pseudintermedius 0.00 2 2 S 2044912 Staphylococcus debuckii 0.00 1 1 S 1290 Staphylococcus hominis 0.00 1 1 S 201828 Staphylococcus casei 0.00 2 0 G 2803850 Mammaliicoccus 0.00 2 2 S 1296 Mammaliicoccus sciuri 0.00 1 0 G 45669 Salinicoccus 0.00 1 0 G1 2628837 unclassified Salinicoccus 0.00 1 1 S 3136731 Salinicoccus sp. Bachu38 0.20 133 0 F 186820 Listeriaceae 0.17 115 11 G 1637 Listeria 0.08 53 0 S 1638 Listeria ivanovii 0.08 53 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.08 53 53 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.04 29 0 G1 2642072 unclassified Listeria 0.04 29 29 S 1844999 Listeria sp. PSOL-1 0.03 22 22 S 1639 Listeria monocytogenes 0.03 18 0 G 2755 Brochothrix 0.03 18 18 S 2756 Brochothrix thermosphacta 0.19 127 0 F 539738 Gemellaceae 0.19 127 76 G 1378 Gemella 0.05 37 37 S 29391 Gemella morbillorum 0.01 7 7 S 84135 Gemella sanguinis 0.01 7 7 G1 2624949 unclassified Gemella 0.07 48 0 F 186822 Paenibacillaceae 0.05 31 0 G 44249 Paenibacillus 0.02 11 7 S 1406 Paenibacillus polymyxa 0.00 2 2 S1 886882 Paenibacillus polymyxa SC2 0.00 2 2 S1 1413214 Paenibacillus polymyxa SQR-21 0.01 7 0 G1 185978 unclassified Paenibacillus 0.00 2 2 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 715179 Paenibacillus sp. sptzw28 0.00 1 1 S 2871175 Paenibacillus sp. DR312 0.00 1 1 S 1906272 Paenibacillus sp. JZ16 0.00 1 1 S 2921460 Paenibacillus sp. FSL K6-1096 0.01 4 4 S 562959 Paenibacillus cellulositrophicus 0.00 3 3 S 1178515 Paenibacillus swuensis 0.00 2 2 S 79263 Paenibacillus chitinolyticus 0.00 2 2 S 2509456 Paenibacillus protaetiae 0.00 1 1 S 130049 Paenibacillus dendritiformis 0.00 1 1 S 1778678 Paenibacillus psychroresistens 0.01 8 0 F1 85151 Aneurinibacillus group 0.01 8 7 G 55079 Aneurinibacillus 0.00 1 1 S 1500254 Aneurinibacillus soli 0.01 8 0 G 329857 Cohnella 0.01 8 8 S 2507935 Cohnella abietis 0.00 1 0 G 456492 Saccharibacillus 0.00 1 1 S 2583377 Saccharibacillus brassicae 0.04 26 2 F 186818 Planococcaceae 0.02 12 0 G 651660 Paenisporosarcina 0.01 10 10 S 2320858 Paenisporosarcina cavernae 0.00 2 2 S 417367 Paenisporosarcina antarctica 0.01 6 0 G 160795 Ureibacillus 0.01 6 6 S 367743 Ureibacillus thermophilus 0.01 4 1 G 1372 Planococcus 0.00 3 0 G1 2662419 unclassified Planococcus (in: firmicutes) 0.00 3 3 S 2058136 Planococcus sp. MB-3u-03 0.00 1 1 G 1569 Sporosarcina 0.00 1 0 G 889388 Chryseomicrobium 0.00 1 0 G1 2625558 unclassified Chryseomicrobium 0.00 1 1 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.02 15 0 F 186823 Alicyclobacillaceae 0.02 15 1 G 29330 Alicyclobacillus 0.02 14 14 S 2931921 Alicyclobacillus mengziensis 0.01 5 1 F 186824 Thermoactinomycetaceae 0.00 2 0 G 292635 Laceyella 0.00 2 2 S 37482 Laceyella sacchari 0.00 2 0 G 1677050 Novibacillus 0.00 2 2 S 1471761 Novibacillus thermophilus 0.00 2 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 1 1 G 33986 Exiguobacterium 2.30 1566 0 C 909932 Negativicutes 1.33 905 0 O 1843489 Veillonellales 1.33 905 1 F 31977 Veillonellaceae 1.31 894 140 G 29465 Veillonella 0.87 591 591 S 29466 Veillonella parvula 0.21 144 144 S 423477 Veillonella rogosae 0.02 14 14 S 39777 Veillonella atypica 0.01 5 5 S 248315 Veillonella rodentium 0.01 7 5 G 906 Megasphaera 0.00 2 2 S 907 Megasphaera elsdenii 0.00 3 3 G 39948 Dialister 0.97 660 0 O 909929 Selenomonadales 0.97 660 0 F 1843491 Selenomonadaceae 0.97 660 199 G 970 Selenomonas 0.38 260 41 G1 2637378 unclassified Selenomonas 0.19 130 130 S 713030 Selenomonas sp. oral taxon 136 0.11 75 75 S 1884263 Selenomonas sp. oral taxon 920 0.02 11 11 S 712528 Selenomonas sp. oral taxon 126 0.00 2 2 S 712538 Selenomonas sp. oral taxon 478 0.00 1 1 S 3095337 Selenomonas sp. TAMA-11512 0.29 195 195 S 69823 Selenomonas sputigena 0.01 5 5 S 2754044 Selenomonas timonae 0.00 1 1 S 135079 Selenomonas dianae 0.00 1 0 O 1843488 Acidaminococcales 0.00 1 1 F 909930 Acidaminococcaceae 0.54 365 9 C 186801 Clostridia 0.24 166 0 O 3085636 Lachnospirales 0.18 121 10 F 186803 Lachnospiraceae 0.13 87 77 G 1164882 Lachnoanaerobaculum 0.01 10 10 S 2490855 Lachnoanaerobaculum gingivalis 0.02 17 0 G 1213720 Stomatobaculum 0.02 17 0 G1 2643635 unclassified Stomatobaculum 0.02 17 17 S 3059030 Stomatobaculum sp. F0698 0.00 2 0 G 2383 Candidatus Epulonipiscium 0.00 2 2 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 G 841 Roseburia 0.00 1 1 S 166486 Roseburia intestinalis 0.00 1 0 G 2719231 Lacrimispora 0.00 1 1 S 384636 Lacrimispora xylanisolvens 0.00 1 0 G 2944193 Simiaoa 0.00 1 1 S 2763672 Simiaoa sunii 0.00 1 0 G 1506553 Lachnoclostridium 0.00 1 0 S 66219 Lachnoclostridium phytofermentans 0.00 1 1 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 1 0 G 33042 Coprococcus 0.00 1 1 S 116085 Coprococcus catus 0.07 45 0 F 2603322 Vallitaleaceae 0.07 45 0 G 2603323 Petrocella 0.07 45 45 S 2173034 Petrocella atlantisensis 0.13 87 0 O 53433 Halanaerobiales 0.12 85 0 F 53434 Halobacteroidaceae 0.12 84 0 G 42417 Halobacteroides 0.12 84 0 S 42422 Halobacteroides halobius 0.12 84 84 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 1 1 F 972 Halanaerobiaceae 0.00 1 0 O1 387655 Halanaerobiales incertae sedis 0.00 1 0 G 1769008 Anoxybacter 0.00 1 1 S 1323375 Anoxybacter fermentans 0.12 85 4 O 186802 Eubacteriales 0.03 23 2 F 31979 Clostridiaceae 0.03 21 7 G 1485 Clostridium 0.01 4 4 S 1502 Clostridium perfringens 0.00 3 2 S 1491 Clostridium botulinum 0.00 1 1 S1 1408283 Clostridium botulinum CDC_1436 0.00 3 0 G1 2614128 unclassified Clostridium 0.00 3 3 S 2483110 Clostridium sp. JN-1 0.00 2 0 S 1493 Clostridium cellulovorans 0.00 2 2 S1 573061 Clostridium cellulovorans 743B 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 0 S 1561 Clostridium baratii 0.00 1 1 S1 1415775 Clostridium baratii str. Sullivan 0.02 17 2 F 216572 Oscillospiraceae 0.01 5 0 G 1263 Ruminococcus 0.00 2 2 S 2564099 Ruminococcus bovis 0.00 2 2 G1 2608920 unclassified Ruminococcus 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.01 4 2 G 216851 Faecalibacterium 0.00 2 2 S 853 Faecalibacterium prausnitzii 0.00 2 0 G 35829 Acetivibrio 0.00 1 1 S 1515 Acetivibrio thermocellus 0.00 1 1 S 1677857 Acetivibrio saccincola 0.00 2 0 G 459786 Oscillibacter 0.00 2 2 S 2763056 Oscillibacter hominis 0.00 1 0 G 1905344 Ruthenibacterium 0.00 1 1 S 1550024 Ruthenibacterium lactatiformans 0.00 1 0 G 1637257 Mageeibacillus 0.00 1 0 S 884684 Mageeibacillus indolicus 0.00 1 1 S1 699246 Mageeibacillus indolicus UPII9-5 0.02 15 0 O1 538999 Eubacteriales incertae sedis 0.01 10 0 G 1392389 Intestinimonas 0.01 10 10 S 1297617 Intestinimonas butyriciproducens 0.00 3 1 G 1686313 Fenollaria 0.00 2 2 S 938288 Fenollaria massiliensis 0.00 1 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 1 1 G 73918 Thermaerobacter 0.00 1 0 F 543347 Clostridiales Family XVI. Incertae Sedis 0.00 1 0 G 178898 Carboxydocella 0.00 1 1 S 178899 Carboxydocella thermautotrophica 0.02 14 12 F 31984 Heliobacteriaceae 0.00 2 0 G 79598 Heliorestis 0.00 2 2 S 356322 Heliorestis convoluta 0.00 3 0 F 186807 Peptococcaceae 0.00 2 2 G 2916693 Desulforamulus 0.00 1 0 G 2282741 Desulfofundulus 0.00 1 0 S 58135 Desulfofundulus kuznetsovii 0.00 1 1 S1 760568 Desulfofundulus kuznetsovii DSM 6115 0.00 2 0 F 3047432 Maliibacteriaceae 0.00 2 0 G 3047433 Maliibacterium 0.00 2 2 S 2086585 Maliibacterium massiliense 0.00 2 0 F 2867375 Desulfallaceae 0.00 2 0 G 2867376 Desulfoscipio 0.00 2 0 S 102134 Desulfoscipio gibsoniae 0.00 2 2 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 1 0 F 1491775 Proteinivoraceae 0.00 1 0 G 2838170 Alkalicella 0.00 1 1 S 2731377 Alkalicella caledoniensis 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 1 G 3046369 Aristaeella 0.00 1 0 F 2937910 Desulfotomaculaceae 0.00 1 0 G 1562 Desulfotomaculum 0.00 1 0 S 1565 Desulfotomaculum nigrificans 0.00 1 1 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 1 0 F 186806 Eubacteriaceae 0.00 1 0 G 274470 Alkalibacter 0.00 1 1 S 2815577 Alkalibacter rhizosphaerae 0.00 1 0 F 68298 Syntrophomonadaceae 0.00 1 0 G 129001 Syntrophothermus 0.00 1 0 S 86170 Syntrophothermus lipocalidus 0.00 1 1 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.02 14 0 O 3082720 Peptostreptococcales 0.02 11 1 F 186804 Peptostreptococcaceae 0.01 5 0 G 1257 Peptostreptococcus 0.01 5 5 S 3003601 Peptostreptococcus equinus 0.00 2 0 G 1501226 Romboutsia 0.00 2 0 G1 2626894 unclassified Romboutsia 0.00 2 2 S 2708053 Romboutsia sp. 13368 0.00 2 0 G 1505657 Intestinibacter 0.00 2 2 S 261299 Intestinibacter bartlettii 0.00 1 0 G 1870884 Clostridioides 0.00 1 1 S 1496 Clostridioides difficile 0.00 3 0 F 3030910 Anaerovoracaceae 0.00 3 2 G 1926556 Emergencia 0.00 1 0 G1 2642996 unclassified Emergencia 0.00 1 1 S 3114296 Emergencia sp. JLR.KK010 0.00 3 0 O 68295 Thermoanaerobacterales 0.00 3 0 F 186814 Thermoanaerobacteraceae 0.00 1 1 G 28895 Thermoanaerobacterium 0.00 1 0 G 249529 Caldanaerobacter 0.00 1 0 S 911092 Caldanaerobacter subterraneus 0.00 1 0 S1 119072 Caldanaerobacter subterraneus subsp. tengcongensis 0.00 1 1 S2 273068 Caldanaerobacter subterraneus subsp. tengcongensis MB4 0.00 1 0 G 3051499 Aceticella 0.00 1 1 S 2755338 Aceticella autotrophica 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039168 Moorellaceae 0.00 1 0 G 202949 Thermanaeromonas 0.00 1 0 S 161154 Thermanaeromonas toyohensis 0.00 1 1 S1 698762 Thermanaeromonas toyohensis ToBE 0.08 57 0 C 1737404 Tissierellia 0.08 54 2 O 1737405 Tissierellales 0.08 52 0 F 1570339 Peptoniphilaceae 0.05 31 2 G 165779 Anaerococcus 0.04 25 25 S 1755241 Anaerococcus nagyae 0.00 2 2 S 1870984 Anaerococcus mediterraneensis 0.00 1 0 S 33034 Anaerococcus prevotii 0.00 1 1 S1 525919 Anaerococcus prevotii DSM 20548 0.00 1 0 G1 2614126 unclassified Anaerococcus 0.00 1 1 S 3036300 Anaerococcus sp. Marseille-Q7828 0.02 16 0 G 162289 Peptoniphilus 0.01 9 9 S 54005 Peptoniphilus harei 0.01 7 7 S 3036303 Peptoniphilus genitalis 0.00 3 0 G 150022 Finegoldia 0.00 3 3 S 1260 Finegoldia magna 0.00 2 0 G 543311 Parvimonas 0.00 2 2 S 33033 Parvimonas micra 0.00 3 0 C1 1737407 Tissierellia incertae sedis 0.00 3 0 G 1582879 Ezakiella 0.00 3 3 S 46507 Ezakiella coagulans 0.02 13 0 C 526524 Erysipelotrichia 0.02 13 0 O 526525 Erysipelotrichales 0.02 11 0 F 128827 Erysipelotrichaceae 0.01 7 0 G 123375 Solobacterium 0.01 7 7 S 102148 Solobacterium moorei 0.00 3 0 G 1647 Erysipelothrix 0.00 2 2 S 1648 Erysipelothrix rhusiopathiae 0.00 1 0 G1 2624170 unclassified Erysipelothrix 0.00 1 1 S 2714928 Erysipelothrix sp. HDW6A 0.00 1 1 G 174708 Allobaculum 0.00 2 0 F 2810280 Coprobacillaceae 0.00 2 2 G 3025755 Thomasclavelia 0.00 1 0 C 3086086 Dethiobacteria 0.00 1 0 O 3086087 Dethiobacterales 0.00 1 0 F 3086088 Dethiobacteraceae 0.00 1 0 G 338648 Candidatus Contubernalis 0.00 1 1 S 338645 Candidatus Contubernalis alkalaceticus 10.82 7366 2 P 201174 Actinomycetota 10.79 7348 47 C 1760 Actinomycetes 7.29 4964 24 O 85006 Micrococcales 7.19 4896 15 F 1268 Micrococcaceae 7.10 4833 580 G 32207 Rothia 5.00 3407 3407 S 2047 Rothia dentocariosa 1.11 756 756 S 172042 Rothia aeria 0.11 73 71 S 43675 Rothia mucilaginosa 0.00 2 2 S1 680646 Rothia mucilaginosa DY-18 0.02 15 15 S 169480 Rothia amarae 0.00 2 0 G1 2689056 unclassified Rothia (in: high G+C Gram-positive bacteria) 0.00 2 2 S 2810516 Rothia sp. ZJ932 0.03 19 0 G 1742993 Pseudarthrobacter 0.03 19 0 G1 2647000 unclassified Pseudarthrobacter 0.03 19 19 S 2973976 Pseudarthrobacter sp. NS4 0.01 9 9 G 1160973 Auritidibacter 0.01 7 7 G 1269 Micrococcus 0.01 6 0 G 1742989 Glutamicibacter 0.01 5 5 S 37929 Glutamicibacter nicotianae 0.00 1 0 G1 2627139 unclassified Glutamicibacter 0.00 1 1 S 3046593 Glutamicibacter sp. B1 0.00 3 2 G 57493 Kocuria 0.00 1 1 S 71999 Kocuria palustris 0.00 2 2 G 57494 Nesterenkonia 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2991715 Arthrobacter sp. ATA002 0.00 1 0 G 1742992 Paenarthrobacter 0.00 1 0 G1 2634190 unclassified Paenarthrobacter 0.00 1 1 S 3049085 Paenarthrobacter sp. R1 0.03 21 8 F 85023 Microbacteriaceae 0.01 5 0 F1 1655488 Luna cluster 0.01 5 2 F2 1655489 Luna-1 subcluster 0.00 2 0 G 529881 Aquiluna 0.00 1 1 S 2499157 Aquiluna borgnonia 0.00 1 0 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 1 0 G 529883 Rhodoluna 0.00 1 1 S 535712 Candidatus Rhodoluna planktonica 0.00 3 0 G 1573 Clavibacter 0.00 3 3 S 31963 Clavibacter nebraskensis 0.00 2 0 G 447237 Frondihabitans 0.00 2 0 G1 2626248 unclassified Frondihabitans 0.00 2 2 S 1446794 Frondihabitans sp. 762G35 0.00 1 1 G 55968 Leucobacter 0.00 1 0 G 1434022 Naasia 0.00 1 1 S 1162966 Naasia aerilata 0.00 1 0 G 33877 Agromyces 0.00 1 1 S 2585717 Agromyces laixinhei 0.01 6 0 F 2805591 Tropherymataceae 0.01 6 0 G 2038 Tropheryma 0.01 6 6 S 2039 Tropheryma whipplei 0.01 6 0 F 1331736 Ruaniaceae 0.01 6 6 G 626119 Ruania 0.00 3 0 F 2805590 Ornithinimicrobiaceae 0.00 2 2 G 125287 Ornithinimicrobium 0.00 1 0 G 265976 Serinicoccus 0.00 1 0 S 247333 Serinicoccus marinus 0.00 1 1 S1 1123251 Serinicoccus marinus DSM 15273 0.00 3 0 F 85019 Brevibacteriaceae 0.00 3 0 G 1696 Brevibacterium 0.00 3 0 G1 2614124 unclassified Brevibacterium 0.00 3 3 S 2999062 Brevibacterium sp. BRM-1 0.00 3 1 F 85021 Intrasporangiaceae 0.00 2 0 G 267408 Arsenicicoccus 0.00 2 0 G1 2663846 unclassified Arsenicicoccus 0.00 2 2 S 1658671 Arsenicicoccus sp. oral taxon 190 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 0 G 1926259 Pseudactinotalea 0.00 1 0 G1 2649176 unclassified Pseudactinotalea 0.00 1 1 S 2654547 Pseudactinotalea sp. HY158 0.00 1 0 F 1042322 Demequinaceae 0.00 1 0 G 577469 Demequina 0.00 1 0 G1 2620311 unclassified Demequina 0.00 1 1 S 2881056 Demequina sp. TMPB413 1.26 856 11 O 85009 Propionibacteriales 1.23 838 43 F 31957 Propionibacteriaceae 1.11 755 12 G 1912216 Cutibacterium 1.01 687 682 S 1747 Cutibacterium acnes 0.01 5 2 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 3 3 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.07 49 49 S 33011 Cutibacterium granulosum 0.01 5 5 S 33010 Cutibacterium avidum 0.00 2 2 S 2559073 Cutibacterium modestum 0.03 19 1 G 2801844 Arachnia 0.03 18 18 S 1750 Arachnia propionica 0.01 7 0 G 29404 Microlunatus 0.01 4 0 G1 2619695 unclassified Microlunatus 0.01 4 4 S 2672569 Microlunatus sp. Gsoil 973 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.00 1 1 S 630515 Microlunatus soli 0.00 1 1 S 2596828 Microlunatus elymi 0.01 5 1 G 1912215 Acidipropionibacterium 0.01 4 4 S 1749 Acidipropionibacterium jensenii 0.01 4 1 G 72763 Tessaracoccus 0.00 2 2 S 1285901 Tessaracoccus defluvii 0.00 1 1 S 2161816 Tessaracoccus timonensis 0.00 2 0 G 1743 Propionibacterium 0.00 2 2 S 556499 Propionibacterium acidifaciens 0.00 1 0 G 369926 Brooklawnia 0.00 1 1 S 3041175 Brooklawnia propionicigenes 0.00 1 0 G 1278221 Auraticoccus 0.00 1 1 S 675864 Auraticoccus monumenti 0.00 1 0 G 1911549 Raineyella 0.00 1 1 G1 2662260 unclassified Raineyella 0.01 6 1 F 85015 Nocardioidaceae 0.01 5 0 G 1839 Nocardioides 0.00 1 1 S 160826 Nocardioides aquaticus 0.00 1 1 S 3095075 Nocardioides renjunii 0.00 1 1 S 433659 Nocardioides mesophilus 0.00 1 1 S 2872154 Nocardioides coralli 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 2976000 Nocardioides sp. NBC_00368 0.00 1 0 F 2805400 Actinopolymorphaceae 0.00 1 0 G 117156 Actinopolymorpha 0.00 1 1 S 117157 Actinopolymorpha singaporensis 1.21 822 0 O 2037 Actinomycetales 1.21 822 22 F 2049 Actinomycetaceae 0.94 639 340 G 1654 Actinomyces 0.18 124 124 S 1288391 Actinomyces timonensis 0.11 76 48 G1 2609248 unclassified Actinomyces 0.01 10 10 S 1851395 Actinomyces sp. Chiba101 0.01 9 9 S 712116 Actinomyces sp. oral taxon 169 0.01 9 9 S 712122 Actinomyces sp. oral taxon 414 0.05 33 33 S 1655 Actinomyces naeslundii 0.03 23 23 S 461393 Actinomyces massiliensis 0.03 20 20 S 1960083 Actinomyces gaoshouyii 0.01 9 9 S 675090 Actinomyces weissii 0.01 8 7 S 544580 Actinomyces oris 0.00 1 1 S1 871541 Actinomyces oris K20 0.00 2 2 S 2763540 Actinomyces trachealis 0.00 2 2 S 2560010 Actinomyces procaprae 0.00 1 1 S 52771 Actinomyces howellii 0.00 1 1 S 2737173 Actinomyces marmotae 0.15 103 9 G 2529408 Schaalia 0.13 91 91 S 1660 Schaalia odontolytica 0.00 2 2 S 131110 Schaalia radingae 0.00 1 0 G1 2691889 unclassified Schaalia 0.00 1 1 S 2709403 Schaalia sp. ZJ405 0.07 48 0 G 2912996 Changpingibacter 0.07 48 48 S 2758440 Changpingibacter yushuensis 0.01 4 0 G 184869 Varibaculum 0.01 4 4 S 2811781 Varibaculum prostatecancerukia 0.00 3 0 G 2740557 Pauljensenia 0.00 3 3 S 178339 Pauljensenia hongkongensis 0.00 1 1 G 1522056 Flaviflexus 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.00 1 0 G 2767318 Boudabousia 0.00 1 1 S 1912795 Boudabousia tangfeifanii 0.75 512 2 O 85007 Mycobacteriales 0.71 482 0 F 1653 Corynebacteriaceae 0.71 482 46 G 1716 Corynebacterium 0.33 226 226 S 61592 Corynebacterium durum 0.26 177 177 S 43768 Corynebacterium matruchotii 0.01 9 9 S 679663 Corynebacterium canis 0.01 8 8 S 38284 Corynebacterium accolens 0.00 3 3 S 43765 Corynebacterium amycolatum 0.00 2 0 S 441501 Corynebacterium massiliense 0.00 2 2 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 2 0 S 1718 Corynebacterium glutamicum 0.00 2 2 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 2 2 S 35757 Corynebacterium cystitidis 0.00 1 1 S 161895 Corynebacterium phocae 0.00 1 0 G1 2624378 unclassified Corynebacterium 0.00 1 1 S 2599641 Corynebacterium sp. sy039 0.00 1 1 S 43771 Corynebacterium urealyticum 0.00 1 0 S 38288 Corynebacterium genitalium 0.00 1 1 S1 585529 Corynebacterium genitalium ATCC 33030 0.00 1 0 S 203263 Corynebacterium aquilae 0.00 1 1 S1 1431546 Corynebacterium aquilae DSM 44791 0.00 1 1 S 53374 Corynebacterium coyleae 0.00 1 1 S 322009 Corynebacterium cyclohexanicum 0.02 14 3 F 1762 Mycobacteriaceae 0.01 9 6 G 1763 Mycobacterium 0.00 2 0 G1 77643 Mycobacterium tuberculosis complex 0.00 2 2 S 1773 Mycobacterium tuberculosis 0.00 1 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2675523 Mycobacterium sp. DL440 0.00 1 0 G 1866885 Mycolicibacterium 0.00 1 0 G1 2636767 unclassified Mycolicibacterium 0.00 1 1 S 3042320 Mycolicibacterium sp. ND9-15 0.00 1 0 G 2126281 Mycolicibacillus 0.00 1 1 S 1069220 Mycolicibacillus koreensis 0.01 6 0 F 85025 Nocardiaceae 0.00 2 1 G 1817 Nocardia 0.00 1 1 S 37332 Nocardia seriolae 0.00 2 0 G 1827 Rhodococcus 0.00 2 2 S 37919 Rhodococcus opacus 0.00 2 0 G 2979332 Prescottella 0.00 2 2 S 43767 Prescottella equi 0.01 4 0 F 2805586 Lawsonellaceae 0.01 4 0 G 1847725 Lawsonella 0.01 4 4 S 1528099 Lawsonella clevelandensis 0.00 3 0 F 85026 Gordoniaceae 0.00 3 0 G 2053 Gordonia 0.00 2 2 S 84595 Gordonia polyisoprenivorans 0.00 1 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2742602 Gordonia sp. X0973 0.00 1 0 F 85029 Dietziaceae 0.00 1 1 G 37914 Dietzia 0.17 115 0 O 85011 Kitasatosporales 0.17 115 1 F 2062 Streptomycetaceae 0.17 114 1 G 1883 Streptomyces 0.12 81 0 G1 1477431 Streptomyces albidoflavus group 0.12 81 81 S 1886 Streptomyces albidoflavus 0.03 21 1 G1 2593676 unclassified Streptomyces 0.01 4 4 S 2903645 Streptomyces sp. NBC_00310 0.00 2 2 S 2933779 Streptomyces sp. WAC00303 0.00 2 2 S 3075825 Streptomyces sp. AM8-1-1 0.00 2 2 S 2099584 Streptomyces sp. ICC4 0.00 2 2 S 3030210 Streptomyces sp. WZ-12 0.00 1 1 S 2903640 Streptomyces sp. NBC_00239 0.00 1 1 S 2903818 Streptomyces sp. NBC_01304 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2903786 Streptomyces sp. NBC_01232 0.00 1 1 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 2594460 Streptomyces sp. S1A1-8 0.00 1 1 S 1262452 Streptomyces sp. 769 0.01 4 4 S 2508722 Streptomyces roseicoloratus 0.00 2 0 S 285530 Streptomyces sviceus 0.00 2 2 S1 463191 Streptomyces sviceus ATCC 29083 0.00 1 1 S 33900 Streptomyces murinus 0.00 1 1 S 1827580 Streptomyces nigra 0.00 1 1 S 42234 Streptomyces acidiscabies 0.00 1 1 S 35621 Streptomyces mobaraensis 0.00 1 1 S 1890 Streptomyces antibioticus 0.01 10 0 O 85004 Bifidobacteriales 0.01 10 1 F 31953 Bifidobacteriaceae 0.01 9 6 G 1678 Bifidobacterium 0.00 2 0 S 216816 Bifidobacterium longum 0.00 2 2 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 1 S 28026 Bifidobacterium pseudocatenulatum 0.01 9 0 O 85010 Pseudonocardiales 0.01 9 0 F 2070 Pseudonocardiaceae 0.01 4 1 G 1813 Amycolatopsis 0.00 3 0 G1 2618356 unclassified Amycolatopsis 0.00 2 2 S 2745196 Amycolatopsis sp. CA-230715 0.00 1 1 S 2742131 Amycolatopsis sp. Hca4 0.00 1 0 G 1847 Pseudonocardia 0.00 1 1 S 2074 Pseudonocardia autotrophica 0.00 1 0 G 2071 Saccharothrix 0.00 1 0 G1 2593673 unclassified Saccharothrix 0.00 1 1 S 2781735 Saccharothrix sp. 6-C 0.00 1 1 G 40566 Actinosynnema 0.00 1 0 G 43356 Kutzneria 0.00 1 1 S 1483604 Kutzneria chonburiensis 0.00 1 0 G 165301 Lentzea 0.00 1 0 G1 2643253 unclassified Lentzea 0.00 1 1 S 2951806 Lentzea sp. HUAS12 0.01 5 0 O 85012 Streptosporangiales 0.01 5 0 F 2012 Thermomonosporaceae 0.01 5 0 G 1988 Actinomadura 0.01 5 5 S 1993 Actinomadura madurae 0.00 3 0 O 85014 Glycomycetales 0.00 3 0 F 85034 Glycomycetaceae 0.00 2 0 G 2838311 Natronoglycomyces 0.00 2 2 S 2811108 Natronoglycomyces albus 0.00 1 0 G 283810 Stackebrandtia 0.00 1 0 S 283811 Stackebrandtia nassauensis 0.00 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.00 3 0 O 85008 Micromonosporales 0.00 3 3 F 28056 Micromonosporaceae 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 0 F 2162846 Candidatus Nanopelagicaceae 0.00 2 0 G 2039639 Candidatus Nanopelagicus 0.00 2 2 S 1884915 Candidatus Nanopelagicus hibericus 0.01 8 0 C 84998 Coriobacteriia 0.01 5 0 O 84999 Coriobacteriales 0.01 5 0 F 1643824 Atopobiaceae 0.00 3 0 G 2082587 Parolsenella 0.00 3 3 S 1871022 Parolsenella massiliensis 0.00 2 2 G 2767353 Lancefieldella 0.00 3 0 O 1643822 Eggerthellales 0.00 3 0 F 1643826 Eggerthellaceae 0.00 1 1 G 447020 Adlercreutzia 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.00 1 0 G 2005386 Arabiibacter 0.00 1 1 S 1870985 Arabiibacter massiliensis 0.01 5 0 C 84992 Acidimicrobiia 0.01 5 0 O 84993 Acidimicrobiales 0.00 3 0 F 633392 Iamiaceae 0.00 3 0 G 467975 Iamia 0.00 3 3 S 467976 Iamia majanohamensis 0.00 2 0 F 84994 Acidimicrobiaceae 0.00 2 0 G 53634 Acidimicrobium 0.00 2 0 S 53635 Acidimicrobium ferrooxidans 0.00 2 2 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.00 3 0 C 1497346 Thermoleophilia 0.00 2 0 O 588674 Thermoleophilales 0.00 2 0 F 320796 Thermoleophilaceae 0.00 2 0 G 192992 Thermoleophilum 0.00 2 2 S 29539 Thermoleophilum album 0.00 1 1 O 588673 Solirubrobacterales 0.38 262 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.38 262 9 P 1117 Cyanobacteriota 0.37 253 55 C 3028117 Cyanophyceae 0.20 137 3 C1 1301283 Oscillatoriophycideae 0.16 107 0 O 1150 Oscillatoriales 0.15 99 0 F 2934961 Sirenicapillariaceae 0.15 99 0 G 2596745 Limnospira 0.15 99 0 S 147322 Limnospira indica 0.14 98 98 S1 2760438 Limnospira indica BM01 0.00 1 1 S1 376219 Limnospira indica PCC 8005 0.01 5 0 F 1892252 Microcoleaceae 0.01 5 5 G 54304 Planktothrix 0.00 3 0 F 1892254 Oscillatoriaceae 0.00 3 0 G 1198 Phormidium 0.00 3 0 S 2974039 Phormidium yuhuli 0.00 3 3 S1 2940671 Phormidium yuhuli AB48 0.04 27 0 O 1118 Chroococcales 0.02 17 0 F 1890449 Microcystaceae 0.02 17 1 G 1125 Microcystis 0.02 16 0 G1 2643300 unclassified Microcystis 0.02 16 16 S 1967666 Microcystis sp. MC19 0.01 9 0 F 1890450 Aphanothecaceae 0.01 9 0 G 1453359 Candidatus Atelocyanobacterium 0.01 9 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 9 9 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 1 1 F 1890464 Chroococcaceae 0.03 23 0 O 1955042 Gloeomargaritales 0.03 23 0 F 1955043 Gloeomargaritaceae 0.03 23 0 G 1188227 Gloeomargarita 0.03 23 0 S 1188228 Gloeomargarita lithophora 0.03 23 23 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.02 13 5 O 1161 Nostocales 0.01 5 0 F 1892259 Aphanizomenonaceae 0.01 4 0 G 752201 Sphaerospermopsis 0.01 4 0 S 984207 Sphaerospermopsis torques-reginae 0.01 4 4 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 1 0 G 748770 Dolichospermum 0.00 1 0 S 136073 Dolichospermum compactum 0.00 1 1 S1 1973481 Dolichospermum compactum NIES-806 0.00 3 1 F 1162 Nostocaceae 0.00 1 0 G 1163 Anabaena 0.00 1 0 S 1165 Anabaena cylindrica 0.00 1 1 S1 272123 Anabaena cylindrica PCC 7122 0.00 1 1 G 1177 Nostoc 0.02 12 1 O 1890424 Synechococcales 0.02 11 0 F 1890426 Synechococcaceae 0.02 11 0 G 1129 Synechococcus 0.01 10 0 G1 2626047 unclassified Synechococcus 0.01 6 6 S 195250 Synechococcus sp. PCC 7336 0.01 4 4 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 0 S 32046 Synechococcus elongatus 0.00 1 1 S1 3115655 Synechococcus elongatus IITB5 0.01 4 0 O 3079757 Gomontiellales 0.01 4 0 F 1890431 Chamaesiphonaceae 0.01 4 0 G 217161 Chamaesiphon 0.01 4 0 S 1173032 Chamaesiphon minutus 0.01 4 4 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 3 2 O 307595 Gloeobacterales 0.00 1 0 F 3079741 Anthocerotibacteraceae 0.00 1 0 G 2857076 Anthocerotibacter 0.00 1 0 S 2857077 Anthocerotibacter panamensis 0.00 1 1 S1 2778476 Anthocerotibacter panamensis C109 0.00 3 0 O 2881377 Pseudanabaenales 0.00 3 0 F 1890436 Pseudanabaenaceae 0.00 3 0 G 1152 Pseudanabaena 0.00 3 0 G1 2593292 unclassified Pseudanabaena 0.00 3 3 S 82654 Pseudanabaena sp. PCC 7367 0.00 2 0 O 52604 Pleurocapsales 0.00 2 0 F 1890498 Dermocarpellaceae 0.00 2 0 G 102115 Stanieria 0.00 2 0 S 102116 Stanieria cyanosphaera 0.00 2 2 S1 111780 Stanieria cyanosphaera PCC 7437 0.00 1 0 O 3039985 Nodosilineales 0.00 1 0 F 3039986 Nodosilineaceae 0.00 1 0 G 1120752 Nodosilinea 0.00 1 0 G1 2628167 unclassified Nodosilinea 0.00 1 1 S 3037479 Nodosilinea sp. E11 0.19 127 71 P 544448 Mycoplasmatota 0.05 34 0 C 31969 Mollicutes 0.03 21 0 O 2085 Mycoplasmatales 0.03 18 0 F 2092 Mycoplasmataceae 0.03 18 1 G 2093 Mycoplasma 0.01 9 0 G1 656088 Mycoplasma mycoides group 0.01 5 5 S 1179777 Mycoplasma feriruminatoris 0.01 4 0 S 2095 Mycoplasma capricolum 0.01 4 4 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.01 8 0 G1 2683645 unclassified Mycoplasma 0.01 4 4 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 3 3 S 2967302 Mycoplasma sp. 1018B 0.00 1 1 S 2801918 Mycoplasma sp. E35C 0.00 2 0 O1 1665628 unclassified Mycoplasmatales 0.00 2 2 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 1 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 1 0 G 295595 Candidatus Hepatoplasma 0.00 1 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 1 1 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.01 8 0 O 186328 Entomoplasmatales 0.01 8 0 F 2131 Spiroplasmataceae 0.01 8 4 G 2132 Spiroplasma 0.00 3 1 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3066291 Spiroplasma endosymbiont of Atherix ibis 0.00 1 1 S 3066287 Spiroplasma endosymbiont of Polydrusus cervinus 0.00 1 0 S 216935 Spiroplasma culicicola 0.00 1 1 S1 1276246 Spiroplasma culicicola AES-1 0.01 5 0 O 186329 Acholeplasmatales 0.01 5 1 F 2146 Acholeplasmataceae 0.00 2 0 G 33926 Candidatus Phytoplasma 0.00 2 0 G1 85630 16SrX (Apple proliferation group) 0.00 2 2 S 37692 Candidatus Phytoplasma mali 0.00 1 0 G 2147 Acholeplasma 0.00 1 1 S 2148 Acholeplasma laidlawii 0.00 1 0 G 2903107 Paracholeplasma 0.00 1 1 S 61635 Paracholeplasma brassicae 0.03 18 0 O 2790996 Mycoplasmoidales 0.02 13 2 F 2790998 Mycoplasmoidaceae 0.01 7 7 G 2995234 Mycoplasmoides 0.01 4 0 G 2791001 Malacoplasma 0.01 4 0 S 28227 Malacoplasma penetrans 0.01 4 4 S1 272633 Malacoplasma penetrans HF-2 0.01 5 0 F 2895623 Metamycoplasmataceae 0.01 5 2 G 2767358 Mycoplasmopsis 0.00 2 2 S 114880 Mycoplasmopsis columbinasalis 0.00 1 1 S 53558 Mycoplasmopsis edwardii 0.01 4 0 C 1912503 Candidatus Izimaplasma 0.01 4 0 O 2975519 Candidatus Izemoplasmatales 0.01 4 0 F 2975520 Candidatus Izemoplasmataceae 0.01 4 0 G 2975521 Candidatus Xianfuyuplasma 0.01 4 4 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.03 21 0 P 200795 Chloroflexota 0.01 7 0 C 32061 Chloroflexia 0.01 7 1 O 32064 Chloroflexales 0.01 6 0 O1 1508594 Chloroflexineae 0.01 6 0 F 1106 Chloroflexaceae 0.01 6 5 G 1107 Chloroflexus 0.00 1 0 S 152260 Chloroflexus aggregans 0.00 1 1 S1 326427 Chloroflexus aggregans DSM 9485 0.01 6 0 C 388447 Ktedonobacteria 0.01 6 0 O 388448 Ktedonobacterales 0.01 6 0 F 2692416 Ktedonosporobacteraceae 0.01 6 0 G 2692417 Ktedonosporobacter 0.01 6 6 S 2509675 Ktedonosporobacter rubrisoli 0.01 4 0 C 292625 Anaerolineae 0.01 4 0 O 292629 Anaerolineales 0.01 4 0 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 2 0 G 1649478 Pelolinea 0.00 2 2 S 913107 Pelolinea submarina 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 2 G 2682228 Tepidiforma 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 670486 Dehalogenimonas 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.01 9 0 P 1297 Deinococcota 0.01 9 0 C 188787 Deinococci 0.01 8 0 O 118964 Deinococcales 0.01 8 0 F 183710 Deinococcaceae 0.01 8 6 G 1298 Deinococcus 0.00 1 0 S 68909 Deinococcus geothermalis 0.00 1 1 S1 319795 Deinococcus geothermalis DSM 11300 0.00 1 1 S 317577 Deinococcus ficus 0.00 1 0 O 68933 Thermales 0.00 1 0 F 188786 Thermaceae 0.00 1 1 G 270 Thermus 0.01 7 0 P 67819 Armatimonadota 0.01 5 0 C 1077257 Chthonomonadia 0.01 5 0 O 1077263 Chthonomonadales 0.01 5 0 F 1077264 Chthonomonadaceae 0.01 5 0 G 1077265 Chthonomonas 0.01 5 0 S 454171 Chthonomonas calidirosea 0.01 5 5 S1 1303518 Chthonomonas calidirosea T49 0.00 2 0 C 1663419 Fimbriimonadia 0.00 2 0 O 1663425 Fimbriimonadales 0.00 2 0 F 1663426 Fimbriimonadaceae 0.00 2 0 G 1005038 Fimbriimonas 0.00 2 0 S 1005039 Fimbriimonas ginsengisoli 0.00 2 2 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 5.94 4047 0 P 32066 Fusobacteriota 5.94 4047 0 C 203490 Fusobacteriia 5.94 4047 3 O 203491 Fusobacteriales 5.09 3463 6 F 1129771 Leptotrichiaceae 5.08 3456 406 G 32067 Leptotrichia 1.95 1325 1325 S 157687 Leptotrichia wadei 1.44 981 981 S 554406 Leptotrichia hongkongensis 0.66 450 25 G1 2633022 unclassified Leptotrichia 0.42 284 284 S 712357 Leptotrichia sp. oral taxon 212 0.16 106 106 S 712362 Leptotrichia sp. oral taxon 221 0.02 15 15 S 712361 Leptotrichia sp. oral taxon 218 0.02 12 12 S 3058373 Leptotrichia sp. HMT-225 0.01 5 5 S 1785996 Leptotrichia sp. oral taxon 847 0.00 3 3 S 712368 Leptotrichia sp. oral taxon 498 0.37 255 255 S 157688 Leptotrichia hofstadii 0.03 19 19 S 157691 Leptotrichia shahii 0.02 12 12 S 109328 Leptotrichia trevisanii 0.01 8 0 S 40542 Leptotrichia buccalis 0.01 8 8 S1 523794 Leptotrichia buccalis C-1013-b 0.00 1 0 G 34104 Streptobacillus 0.00 1 1 S 34105 Streptobacillus moniliformis 0.85 581 0 F 203492 Fusobacteriaceae 0.85 581 522 G 848 Fusobacterium 0.02 14 14 S 76857 Fusobacterium polymorphum 0.02 13 13 S 851 Fusobacterium nucleatum 0.01 10 10 S 76859 Fusobacterium animalis 0.01 8 3 S 155615 Fusobacterium vincentii 0.01 5 5 S1 1307427 Fusobacterium vincentii ChDC F8 0.01 5 0 S 1583098 Fusobacterium hwasookii 0.01 5 5 S1 1307443 Fusobacterium hwasookii ChDC F206 0.01 5 5 S 2764326 Fusobacterium hominis 0.00 2 2 S 859 Fusobacterium necrophorum 0.00 1 0 S 850 Fusobacterium mortiferum 0.00 1 1 S1 469616 Fusobacterium mortiferum ATCC 9817 0.00 1 1 S 2663009 Fusobacterium pseudoperiodonticum 3.63 2470 0 D1 1783270 FCB group 3.62 2468 0 D2 68336 Bacteroidota/Chlorobiota group 3.62 2463 2 P 976 Bacteroidota 2.43 1654 0 C 117743 Flavobacteriia 2.43 1654 4 O 200644 Flavobacteriales 2.16 1474 10 F 49546 Flavobacteriaceae 2.13 1448 85 G 1016 Capnocytophaga 1.18 805 805 S 1017 Capnocytophaga gingivalis 0.54 369 369 S 1019 Capnocytophaga sputigena 0.13 91 91 S 327575 Capnocytophaga leadbetteri 0.12 80 8 G1 2640652 unclassified Capnocytophaga 0.10 70 70 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 1 1 S 1316596 Capnocytophaga sp. oral taxon 878 0.00 1 1 S 2748316 Capnocytophaga sp. oral taxon 902 0.02 12 12 S 2708117 Capnocytophaga endodontalis 0.01 6 6 S 45243 Capnocytophaga haemolytica 0.01 8 5 G 237 Flavobacterium 0.00 1 1 S 1871076 Flavobacterium azooxidireducens 0.00 1 1 S 2748320 Flavobacterium inviolabile 0.00 1 1 S 2704140 Flavobacterium bizetiae 0.01 4 0 G 2715289 Amniculibacterium 0.01 4 0 G1 2767187 unclassified Amniculibacterium 0.01 4 4 S 2767188 Amniculibacterium sp. G2-70 0.00 1 0 G 286104 Winogradskyella 0.00 1 0 G1 2615021 unclassified Winogradskyella 0.00 1 1 S 754409 Winogradskyella sp. PG-2 0.00 1 0 G 290174 Aquimarina 0.00 1 0 G1 2627091 unclassified Aquimarina 0.00 1 1 S 1714849 Aquimarina sp. AD10 0.00 1 0 G 1287916 Euzebyella 0.00 1 1 S 1761453 Euzebyella marina 0.00 1 0 G 83612 Psychroflexus 0.00 1 0 G1 196864 unclassified Psychroflexus 0.00 1 1 S 2777186 Psychroflexus sp. ALD_RP9 0.25 171 77 F 2762318 Weeksellaceae 0.07 47 0 F1 2782232 Chryseobacterium group 0.06 39 1 G 59732 Chryseobacterium 0.05 31 0 G1 2593645 unclassified Chryseobacterium 0.05 31 31 S 2713414 Chryseobacterium sp. POL2 0.01 6 6 S 1813611 Chryseobacterium cucumeris 0.00 1 1 S 651561 Chryseobacterium arthrosphaerae 0.01 8 0 G 2782231 Kaistella 0.01 8 8 S 2820270 Candidatus Kaistella beijingensis 0.03 23 0 G 59735 Bergeyella 0.03 20 20 S 1585976 Bergeyella cardium 0.00 3 3 S 1735111 Bergeyella porcorum 0.01 10 1 G 308865 Elizabethkingia 0.01 8 0 G1 2685307 unclassified Elizabethkingia 0.01 8 8 S 2583851 Elizabethkingia sp. JS20170427COW 0.00 1 1 S 238 Elizabethkingia meningoseptica 0.01 8 0 G 34084 Riemerella 0.01 8 8 S 34085 Riemerella anatipestifer 0.00 3 2 G 59734 Empedobacter 0.00 1 1 S 343874 Empedobacter falsenii 0.00 3 0 G 1778601 Apibacter 0.00 3 3 G1 2630820 unclassified Apibacter 0.01 5 0 O1 313602 Flavobacteriales incertae sedis 0.01 5 0 G 336809 Candidatus Karelsulcia 0.01 5 5 S 336810 Candidatus Karelsulcia muelleri 1.16 793 0 C 200643 Bacteroidia 1.15 785 7 O 171549 Bacteroidales 0.83 565 23 F 171552 Prevotellaceae 0.58 396 29 G 838 Prevotella 0.35 237 0 G1 2638335 unclassified Prevotella 0.33 227 227 S 712471 Prevotella sp. oral taxon 475 0.01 8 8 S 2937774 Prevotella sp. E15-22 0.00 2 0 S 652716 Prevotella sp. oral taxon 299 0.00 2 2 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.12 84 84 S 2801997 Prevotella herbatica 0.02 14 14 S 28128 Prevotella corporis 0.01 9 9 S 28132 Prevotella melaninogenica 0.01 9 9 S 28133 Prevotella nigrescens 0.01 5 0 S 52227 Prevotella dentalis 0.01 5 5 S1 908937 Prevotella dentalis DSM 3688 0.01 4 4 S 28131 Prevotella intermedia 0.00 2 2 S 470565 Prevotella histicola 0.00 2 0 S 589436 Prevotella fusca 0.00 2 2 S1 1236517 Prevotella fusca JCM 17724 0.00 1 1 S 28129 Prevotella denticola 0.13 90 0 G 2884814 Pseudoprevotella 0.13 90 90 S 2133944 Pseudoprevotella muciniphila 0.05 36 2 G 2974251 Segatella 0.03 19 19 S 28135 Segatella oris 0.02 13 13 S 165179 Segatella copri 0.00 2 2 S 2518605 Segatella hominis 0.03 18 0 G 2974257 Hoylesella 0.01 10 10 S 28127 Hoylesella buccalis 0.01 8 8 S 76123 Hoylesella enoeca 0.00 1 0 G 558436 Xylanibacter 0.00 1 1 S 839 Xylanibacter ruminicola 0.00 1 1 G 577309 Paraprevotella 0.17 119 0 F 171551 Porphyromonadaceae 0.17 119 0 G 836 Porphyromonas 0.17 119 0 G1 2645799 unclassified Porphyromonas 0.17 119 119 S 712435 Porphyromonas sp. oral taxon 275 0.10 71 0 F 2005525 Tannerellaceae 0.10 71 0 G 195950 Tannerella 0.10 71 71 S 712710 Tannerella serpentiformis 0.02 14 0 F 815 Bacteroidaceae 0.02 13 0 G 816 Bacteroides 0.01 7 7 S 291645 Bacteroides nordii 0.01 5 5 S 818 Bacteroides thetaiotaomicron 0.00 1 1 S 817 Bacteroides fragilis 0.00 1 0 G 909656 Phocaeicola 0.00 1 1 S 357276 Phocaeicola dorei 0.01 5 0 F 171550 Rikenellaceae 0.00 3 0 G 1647173 Acetobacteroides 0.00 3 0 G1 1760810 environmental samples 0.00 3 3 S 1760811 uncultured Acetobacteroides sp. 0.00 2 2 G 239759 Alistipes 0.00 3 1 F 2005519 Barnesiellaceae 0.00 1 1 G 397864 Barnesiella 0.00 1 0 G 1348911 Coprobacter 0.00 1 1 S 1099853 Coprobacter fastidiosus 0.00 1 1 F 2005473 Muribaculaceae 0.01 8 0 O 1970189 Marinilabiliales 0.01 6 0 F 1471398 Prolixibacteraceae 0.01 4 0 G 1254401 Sunxiuqinia 0.01 4 0 G1 1573824 environmental samples 0.01 4 4 S 1573825 uncultured Sunxiuqinia sp. 0.00 1 0 G 1471399 Draconibacterium 0.00 1 0 G1 1573822 environmental samples 0.00 1 1 S 1573823 uncultured Draconibacterium sp. 0.00 1 0 G 1573808 Mangrovibacterium 0.00 1 1 S 1639118 Mangrovibacterium marinum 0.00 2 0 F 558415 Marinilabiliaceae 0.00 2 0 G 1628153 Carboxylicivirga 0.00 2 0 G1 1628155 environmental samples 0.00 2 2 S 1628156 uncultured Carboxylicivirga sp. 0.02 12 0 C 768503 Cytophagia 0.02 12 1 O 768507 Cytophagales 0.01 5 0 F 89373 Cytophagaceae 0.01 5 0 G 107 Spirosoma 0.01 4 4 S 2666025 Spirosoma endbachense 0.00 1 1 S 2735870 Spirosoma taeanense 0.00 3 0 F 1853232 Hymenobacteraceae 0.00 2 2 G 89966 Hymenobacter 0.00 1 1 G 323449 Pontibacter 0.00 2 0 F 200667 Flammeovirgaceae 0.00 1 0 G 59739 Flammeovirga 0.00 1 1 S 373891 Flammeovirga kamogawensis 0.00 1 0 G 3051458 Chondrinema 0.00 1 1 S 2994555 Chondrinema litorale 0.00 1 0 F 1853234 Persicobacteraceae 0.00 1 0 G 1434007 Fulvitalea 0.00 1 1 S 1182444 Fulvitalea axinellae 0.00 2 0 C 117747 Sphingobacteriia 0.00 2 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 1 S 662858 Sphingobacterium bambusae 0.00 1 0 F 3088888 Aurantibacillaceae 0.00 1 0 G 3088889 Aurantibacillus 0.00 1 1 S 3036359 Aurantibacillus circumpalustris 0.00 3 0 P 1090 Chlorobiota 0.00 3 0 C 191410 Chlorobiia 0.00 3 1 O 191411 Chlorobiales 0.00 2 0 F 2968741 Chloroherpetonaceae 0.00 2 0 G 100715 Chloroherpeton 0.00 2 0 S 100716 Chloroherpeton thalassium 0.00 2 2 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 0 P 1134404 Ignavibacteriota 0.00 1 0 C 795747 Ignavibacteria 0.00 1 0 O 795748 Ignavibacteriales 0.00 1 0 F 795749 Ignavibacteriaceae 0.00 1 0 G 795750 Ignavibacterium 0.00 1 0 G1 2639715 unclassified Ignavibacterium 0.00 1 1 S 2651167 Ignavibacterium sp. 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 1 O 1853224 Rhodothermales 0.00 1 0 P 65842 Fibrobacterota 0.00 1 0 C 204430 Fibrobacteria 0.00 1 0 O 218872 Fibrobacterales 0.00 1 0 F 204431 Fibrobacteraceae 0.00 1 0 G 832 Fibrobacter 0.00 1 0 S 833 Fibrobacter succinogenes 0.00 1 0 S1 834 Fibrobacter succinogenes subsp. succinogenes 0.00 1 1 S2 59374 Fibrobacter succinogenes subsp. succinogenes S85 0.00 1 0 P 142182 Gemmatimonadota 0.00 1 0 C 219685 Gemmatimonadia 0.00 1 0 O 219686 Gemmatimonadales 0.00 1 0 F 219687 Gemmatimonadaceae 0.00 1 0 G 173479 Gemmatimonas 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.23 155 0 P 29547 Campylobacterota 0.23 155 0 C 3031852 Epsilonproteobacteria 0.23 154 0 O 213849 Campylobacterales 0.21 144 0 F 72294 Campylobacteraceae 0.21 144 102 G 194 Campylobacter 0.02 15 15 S 199 Campylobacter concisus 0.01 9 9 S 1780362 Campylobacter geochelonis 0.01 7 0 G1 2593542 unclassified Campylobacter 0.01 6 6 S 1660080 Campylobacter sp. RM16192 0.00 1 1 S 2840180 Campylobacter sp. 19-13652 0.00 3 3 S 824 Campylobacter gracilis 0.00 3 3 S 204 Campylobacter showae 0.00 2 0 S 522485 Campylobacter avium 0.00 2 2 S1 522484 Campylobacter avium LMG 24591 0.00 2 2 S 197 Campylobacter jejuni 0.00 1 0 S 198 Campylobacter hyointestinalis 0.00 1 0 S1 91353 Campylobacter hyointestinalis subsp. lawsonii 0.00 1 1 S2 1031752 Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 0.01 6 0 F 2932623 Sulfurospirillaceae 0.01 6 0 G 57665 Sulfurospirillum 0.01 6 0 S 66821 Sulfurospirillum multivorans 0.01 6 6 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.00 3 1 F 72293 Helicobacteraceae 0.00 2 1 G 209 Helicobacter 0.00 1 1 S 210 Helicobacter pylori 0.00 1 0 F 2771471 Sulfurimonadaceae 0.00 1 1 G 202746 Sulfurimonas 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 224467 Nautiliaceae 0.00 1 0 G 191301 Caminibacter 0.00 1 1 S 1424653 Caminibacter pacificus 0.19 130 0 D1 1783257 PVC group 0.12 84 0 P 203682 Planctomycetota 0.12 81 3 C 203683 Planctomycetia 0.11 74 0 O 112 Planctomycetales 0.11 74 0 F 126 Planctomycetaceae 0.11 72 1 G 1649453 Gimesia 0.10 71 71 S 2527964 Gimesia aquarii 0.00 1 0 G 118 Planctomyces 0.00 1 0 G1 2648843 unclassified Planctomyces 0.00 1 1 S 1632864 Planctomyces sp. SH-PL14 0.00 1 0 G 2795780 Symmachiella 0.00 1 1 S 2527995 Symmachiella dynata 0.01 4 1 O 2691354 Pirellulales 0.00 1 0 F 2691357 Pirellulaceae 0.00 1 1 G 2795973 Stieleria 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.00 1 1 F 2691359 Lacipirellulaceae 0.00 2 0 C 666505 Phycisphaerae 0.00 2 0 O 1771349 Tepidisphaerales 0.00 2 0 F 1771355 Tepidisphaeraceae 0.00 2 0 G 2807511 Humisphaera 0.00 2 2 S 2807512 Humisphaera borealis 0.00 1 0 C 2897345 Candidatus Uabimicrobiia 0.00 1 0 O 2897347 Candidatus Uabimicrobiales 0.00 1 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 1 0 G 2897349 Candidatus Uabimicrobium 0.00 1 1 S 2596890 Candidatus Uabimicrobium amorphum 0.06 41 0 P 74201 Verrucomicrobiota 0.03 20 0 C 203494 Verrucomicrobiia 0.03 20 0 O 48461 Verrucomicrobiales 0.03 20 0 F 203557 Verrucomicrobiaceae 0.03 18 0 G 2735 Verrucomicrobium 0.03 18 0 G1 2625155 unclassified Verrucomicrobium 0.03 18 18 S 1882831 Verrucomicrobium sp. GAS474 0.00 2 0 G 2911469 Sulfuriroseicoccus 0.00 2 2 S 2707525 Sulfuriroseicoccus oceanibius 0.01 10 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 10 0 G 1541670 Methylacidimicrobium 0.01 10 10 G1 2730358 unclassified Methylacidimicrobium 0.01 7 0 C 414999 Opitutia 0.01 4 0 O 415000 Opitutales 0.01 4 3 F 134623 Opitutaceae 0.00 1 0 G 178440 Opitutus 0.00 1 0 G1 2649488 unclassified Opitutus 0.00 1 1 S 1882749 Opitutus sp. GAS368 0.00 3 0 O 415001 Puniceicoccales 0.00 3 0 O1 3056381 Puniceicoccales incertae sedis 0.00 3 0 G 3049269 Candidatus Pelagisphaera 0.00 3 3 S 2684113 Candidatus Pelagisphaera phototrophica 0.01 4 0 C 1955630 Methylacidiphilae 0.01 4 0 O 717963 Methylacidiphilales 0.01 4 0 F 717964 Methylacidiphilaceae 0.01 4 4 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.01 5 0 P 204428 Chlamydiota 0.01 5 2 C 204429 Chlamydiia 0.00 2 0 O 1963360 Parachlamydiales 0.00 2 0 F 92713 Parachlamydiaceae 0.00 2 0 G 83551 Parachlamydia 0.00 2 0 S 83552 Parachlamydia acanthamoebae 0.00 2 2 S1 765952 Parachlamydia acanthamoebae UV-7 0.00 1 0 O 51291 Chlamydiales 0.00 1 1 F 809 Chlamydiaceae 0.08 53 2 P 200940 Thermodesulfobacteriota 0.06 43 0 C 3031651 Desulfuromonadia 0.06 43 1 O 69541 Desulfuromonadales 0.06 40 0 F 213421 Desulfuromonadaceae 0.06 40 40 G 890 Desulfuromonas 0.00 2 0 F 3031659 Geopsychrobacteraceae 0.00 2 0 G 37817 Desulfuromusa 0.00 2 0 G1 97902 environmental samples 0.00 2 2 S 219183 uncultured Desulfuromusa sp. 0.00 2 0 C 67799 Thermodesulfobacteria 0.00 2 2 O 188710 Thermodesulfobacteriales 0.00 2 0 C 3031646 Desulfarculia 0.00 2 0 O 453227 Desulfarculales 0.00 2 0 F 453228 Desulfarculaceae 0.00 2 0 G 453229 Desulfarculus 0.00 2 0 S 453230 Desulfarculus baarsii 0.00 2 2 S1 644282 Desulfarculus baarsii DSM 2075 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213465 Syntrophobacteraceae 0.00 1 0 G 29526 Syntrophobacter 0.00 1 0 S 119484 Syntrophobacter fumaroxidans 0.00 1 1 S1 335543 Syntrophobacter fumaroxidans MPOB 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 1 G 2289 Desulfobacter 0.00 1 0 C 3031449 Desulfovibrionia 0.00 1 0 O 213115 Desulfovibrionales 0.00 1 0 F 194924 Desulfovibrionaceae 0.00 1 0 G 3126915 Taurinivorans 0.00 1 1 S 2787751 Taurinivorans muris 0.00 1 0 C 3031450 Candidatus Desulfofervidia 0.00 1 0 O 3031460 Candidatus Desulfofervidales 0.00 1 0 F 1902584 Candidatus Desulfofervidaceae 0.00 1 0 G 1902583 Candidatus Desulfofervidus 0.00 1 1 S 1621989 Candidatus Desulfofervidus auxilii 0.04 28 0 D1 2323 Bacteria incertae sedis 0.04 28 0 D2 1783234 Bacteria candidate phyla 0.04 25 6 P 95818 Candidatus Saccharibacteria 0.02 17 0 C 2093818 Candidatus Saccharimonadia 0.02 14 0 O 2093819 Candidatus Nanosynbacterales 0.02 14 0 F 2093822 Candidatus Nanosynbacteraceae 0.02 14 9 G 2093823 Candidatus Nanosynbacter 0.01 5 5 S 2093824 Candidatus Nanosynbacter lyticus 0.00 3 0 O 2093825 Candidatus Saccharimonadales 0.00 3 0 F 2171986 Candidatus Saccharimonadaceae 0.00 3 0 G 1331051 Candidatus Saccharimonas 0.00 3 3 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 2 0 G 2831665 Candidatus Mycosynbacter 0.00 2 2 S 2665156 Candidatus Mycosynbacter amalyticus 0.00 3 0 D3 95901 Candidatus Dependentiae 0.00 3 0 C 2497643 Candidatus Babeliae 0.00 3 0 O 2497644 Candidatus Babeliales 0.00 3 0 F 2953756 Candidatus Chromulinivoraceae 0.00 3 0 G 2953757 Candidatus Chromulinivorax 0.00 3 3 S 2066483 Candidatus Chromulinivorax destructor 0.02 14 0 P 203691 Spirochaetota 0.02 14 0 C 203692 Spirochaetia 0.01 8 0 O 1643688 Leptospirales 0.01 8 0 F 170 Leptospiraceae 0.01 8 2 G 171 Leptospira 0.01 6 6 S 28183 Leptospira santarosai 0.01 6 0 O 136 Spirochaetales 0.01 4 0 F 1643685 Borreliaceae 0.00 3 0 G 64895 Borreliella 0.00 2 2 S 29519 Borreliella garinii 0.00 1 1 S 100177 Borreliella lusitaniae 0.00 1 0 G 138 Borrelia 0.00 1 0 G1 2649934 unclassified Borrelia 0.00 1 1 S 3058374 Borrelia sp. P9F1 0.00 2 0 F 2845253 Treponemataceae 0.00 2 0 G 157 Treponema 0.00 1 1 S 163 Treponema bryantii 0.00 1 1 S 409322 Treponema pedis 0.01 5 0 P 57723 Acidobacteriota 0.01 4 0 C 204432 Terriglobia 0.01 4 0 O 204433 Terriglobales 0.01 4 0 F 3121618 Candidatus Korobacteraceae 0.01 4 0 G 658061 Candidatus Korobacter 0.01 4 0 S 658062 Candidatus Korobacter versatilis 0.01 4 4 S1 204669 Candidatus Koribacter versatilis Ellin345 0.00 1 0 C 533205 Holophagae 0.00 1 0 O 574975 Holophagales 0.00 1 0 F 574976 Holophagaceae 0.00 1 1 G 44675 Geothrix 0.01 4 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 4 0 P 1293497 Nitrospinota 0.01 4 0 C 1293498 Nitrospinia 0.01 4 0 O 1293499 Nitrospinales 0.01 4 0 F 407032 Nitrospinaceae 0.01 4 0 G 35800 Nitrospina 0.01 4 4 S 1323948 Nitrospina watsonii 0.01 4 0 P 2818505 Myxococcota 0.01 4 0 P1 3031711 Polyangia 0.01 4 0 O 3031712 Polyangiales 0.00 3 0 F 1524216 Labilitrichaceae 0.00 3 0 G 1524217 Labilithrix 0.00 3 3 S 1391654 Labilithrix luteola 0.00 1 0 F 49 Polyangiaceae 0.00 1 0 G 39643 Sorangium 0.00 1 1 S 56 Sorangium cellulosum 0.00 3 0 P 3018035 Bdellovibrionota 0.00 2 0 C 3031418 Bdellovibrionia 0.00 2 0 O 213481 Bdellovibrionales 0.00 2 0 F 213483 Pseudobdellovibrionaceae 0.00 2 0 G 958 Bdellovibrio 0.00 1 1 S 959 Bdellovibrio bacteriovorus 0.00 1 1 G1 2633795 unclassified Bdellovibrio 0.00 1 0 C 1553900 Oligoflexia 0.00 1 0 O 2024973 Silvanigrellales 0.00 1 0 F 2024974 Silvanigrellaceae 0.00 1 0 G 2838409 Pigmentibacter 0.00 1 0 G1 2838410 unclassified Pigmentibacter 0.00 1 1 S 2976982 Pigmentibacter sp. JX0631 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 0 O 191393 Deferribacterales 0.00 2 0 F 2945020 Mucispirillaceae 0.00 2 0 G 248038 Mucispirillum 0.00 2 0 S 248039 Mucispirillum schaedleri 0.00 2 2 S1 1379858 Mucispirillum schaedleri ASF457 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 P 508458 Synergistota 0.00 1 0 C 649775 Synergistia 0.00 1 0 O 649776 Synergistales 0.00 1 0 F 3029088 Dethiosulfovibrionaceae 0.00 1 1 G 638847 Pyramidobacter 0.00 1 0 P 200918 Thermotogota 0.00 1 0 C 188708 Thermotogae 0.00 1 0 O 1643946 Kosmotogales 0.00 1 0 F 1643948 Kosmotogaceae 0.00 1 0 G 651456 Kosmotoga 0.00 1 1 S 1330330 Kosmotoga pacifica 0.00 1 0 P 200783 Aquificota 0.00 1 0 C 187857 Aquificia 0.00 1 0 O 32069 Aquificales 0.00 1 0 F 224027 Hydrogenothermaceae 0.00 1 1 G 212790 Sulfurihydrogenibium 0.00 1 0 D1 68525 delta/epsilon subdivisions 0.00 1 0 C 28221 Deltaproteobacteria 0.00 1 0 O 1779134 Bradymonadales 0.00 1 0 F 2946505 Microvenatoraceae 0.00 1 0 G 2946507 Microvenator 0.00 1 1 S 2600177 Microvenator marinus 0.00 1 0 P 40117 Nitrospirota 0.00 1 0 C 2811502 Thermodesulfovibrionia 0.00 1 0 O 2811503 Thermodesulfovibrionales 0.00 1 0 F 2811505 Dissulfurispiraceae 0.00 1 0 G 2811506 Dissulfurispira 0.00 1 1 S 2715679 Dissulfurispira thermophila 0.67 457 0 D 10239 Viruses 0.58 397 0 D1 2731341 Duplodnaviria 0.58 397 0 K 2731360 Heunggongvirae 0.58 397 0 P 2731618 Uroviricota 0.58 397 0 C 2731619 Caudoviricetes 0.58 395 0 F 2946167 Peduoviridae 0.58 395 0 G 2948703 Evevirus 0.58 395 0 S 2955874 Evevirus ev239 0.58 395 395 S1 2695847 Escherichia phage ESSI2_ev239 0.00 1 1 G 1982251 Pahexavirus 0.00 1 0 F 2946170 Straboviridae 0.00 1 0 F1 1198136 Tevenvirinae 0.00 1 0 G 10663 Tequatrovirus 0.00 1 0 S 2844199 Tequatrovirus gee4507 0.00 1 1 S1 2502306 Escherichia phage vB_EcoM_G4507 0.09 60 0 C 2840056 Naldaviricetes 0.09 60 0 O 2840070 Lefavirales 0.09 60 0 F 10442 Baculoviridae 0.09 60 0 G 558017 Betabaculovirus 0.09 60 0 S 3051997 Betabaculovirus chofumiferanae 0.09 60 60 S1 56947 Choristoneura fumiferana granulovirus