6.72 7214 7214 U 0 unclassified 93.28 100185 107 R 1 root 93.09 99983 22 R1 131567 cellular organisms 93.07 99960 3636 D 2 Bacteria 63.49 68183 317 P 1224 Pseudomonadota 52.14 56003 753 C 1236 Gammaproteobacteria 35.69 38326 0 O 135614 Lysobacterales 35.68 38318 1 F 32033 Lysobacteraceae 35.66 38296 1 G 338 Xanthomonas 35.66 38294 38294 S 29447 Xanthomonas albilineans 0.00 1 0 G1 643453 Xanthomonas citri group 0.00 1 0 S 346 Xanthomonas citri 0.00 1 1 S1 487838 Xanthomonas citri pv. punicae 0.01 16 8 G 40323 Stenotrophomonas 0.01 8 0 G1 995085 Stenotrophomonas maltophilia group 0.01 8 8 S 40324 Stenotrophomonas maltophilia 0.00 2 2 G 68 Lysobacter 0.00 1 0 G 83614 Luteimonas 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 2925842 Luteimonas sp. S4-F44 0.00 1 1 G 83618 Pseudoxanthomonas 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.01 8 2 F 1775411 Rhodanobacteraceae 0.00 4 0 G 242605 Luteibacter 0.00 3 3 S 2911539 Luteibacter aegosomatissinici 0.00 1 1 S 564369 Luteibacter anthropi 0.00 1 1 G 231454 Dyella 0.00 1 0 G 2233801 Ahniella 0.00 1 1 S 2021234 Ahniella affigens 12.43 13351 1061 O 91347 Enterobacterales 10.30 11059 1404 F 543 Enterobacteriaceae 4.91 5277 78 G 561 Escherichia 4.74 5093 4706 S 562 Escherichia coli 0.08 81 81 S1 331112 Escherichia coli HS 0.05 56 56 S1 2079157 Escherichia coli O2:H1 0.04 48 0 S1 1072458 Escherichia coli O7:K1 0.04 48 48 S2 1072459 Escherichia coli O7:K1 str. CE10 0.04 42 42 S1 1446600 Escherichia coli O15:H18 0.03 33 33 S1 244320 Escherichia coli O55:H7 0.03 31 31 S1 1322345 Escherichia coli ATCC 25922 0.03 30 30 S1 2874053 Escherichia coli O25:H1 0.03 29 3 S1 83334 Escherichia coli O157:H7 0.02 17 17 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 5 5 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 3 3 S2 1328859 Escherichia coli O157:H7 str. SS17 0.00 1 1 S2 1330457 Escherichia coli O157:H7 str. SS52 0.01 15 15 S1 316435 Escherichia coli Nissle 1917 0.01 9 9 S1 655817 Escherichia coli ABU 83972 0.00 3 3 S1 439855 Escherichia coli SMS-3-5 0.00 3 3 S1 362663 Escherichia coli 536 0.00 2 0 S1 1038927 Escherichia coli O104:H4 0.00 2 2 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 2 2 S1 376725 Escherichia coli O103:H2 0.00 2 0 S1 861906 Escherichia coli O44:H18 0.00 2 2 S2 216592 Escherichia coli 042 0.00 1 1 S1 3038394 Escherichia coli O155:H21 0.07 78 78 S 208962 Escherichia albertii 0.02 26 26 S 1499973 Escherichia marmotae 0.00 2 2 S 564 Escherichia fergusonii 1.09 1172 24 G 590 Salmonella 1.06 1135 68 S 28901 Salmonella enterica 0.99 1067 37 S1 59201 Salmonella enterica subsp. enterica 0.22 235 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.15 165 165 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.05 58 58 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 12 12 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.22 234 234 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.20 217 217 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.13 138 138 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.06 69 6 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.03 36 36 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.03 27 27 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.04 44 34 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.01 7 7 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 3 3 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.02 19 19 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.01 16 16 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.01 16 16 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.01 12 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.01 12 12 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.01 7 7 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.01 6 6 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 5 5 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 4 4 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 2 2 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 2 2 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.01 13 0 S 54736 Salmonella bongori 0.01 12 12 S1 1299282 Salmonella bongori CFSAN000510 0.00 1 1 S1 2577118 Salmonella bongori serovar 48:z81:- 1.08 1155 0 G 547 Enterobacter 1.04 1118 1 G1 354276 Enterobacter cloacae complex 0.83 890 890 S 299767 Enterobacter ludwigii 0.18 197 195 S 158836 Enterobacter hormaechei 0.00 2 2 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.02 17 17 S 208224 Enterobacter kobei 0.01 8 1 S 550 Enterobacter cloacae 0.01 7 7 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 3 3 S 61645 Enterobacter asburiae 0.00 1 1 S 1812935 Enterobacter roggenkampii 0.00 1 1 S 3029761 Enterobacter pasteurii 0.03 37 37 S 881260 Enterobacter bugandensis 0.75 807 0 F1 2890311 Klebsiella/Raoultella group 0.74 792 13 G 570 Klebsiella 0.55 589 411 S 573 Klebsiella pneumoniae 0.15 162 162 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.01 16 16 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.10 104 32 S 1463165 Klebsiella quasipneumoniae 0.07 72 72 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.04 39 39 S 548 Klebsiella aerogenes 0.02 19 14 S 244366 Klebsiella variicola 0.00 5 5 S1 640131 Klebsiella variicola At-22 0.02 18 18 S 1134687 Klebsiella michiganensis 0.01 7 7 S 2153354 Klebsiella huaxiensis 0.00 2 0 G1 2608929 unclassified Klebsiella 0.00 2 2 S 2829835 Klebsiella sp. P1954 0.00 1 1 S 1259973 Klebsiella electrica 0.01 15 0 G 160674 Raoultella 0.01 12 12 S 575 Raoultella planticola 0.00 3 3 S 54291 Raoultella ornithinolytica 0.34 363 271 F1 36866 unclassified Enterobacteriaceae 0.06 63 63 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.02 25 25 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 2 2 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 1 1 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.00 1 1 S 2675786 Enterobacteriaceae endosymbiont of Donacia thalassina 0.29 313 0 G 2815296 Jejubacter 0.29 313 313 S 2579935 Jejubacter calystegiae 0.16 175 0 G 620 Shigella 0.16 173 173 S 623 Shigella flexneri 0.00 2 2 S 621 Shigella boydii 0.12 133 0 G 1330547 Kosakonia 0.12 131 131 S 208223 Kosakonia cowanii 0.00 2 2 S 283686 Kosakonia radicincitans 0.09 102 2 G 544 Citrobacter 0.05 52 1 G1 1344959 Citrobacter freundii complex 0.01 16 16 S 546 Citrobacter freundii 0.01 11 11 S 67828 Citrobacter gillenii 0.01 11 11 S 1639133 Citrobacter portucalensis 0.01 11 0 G2 2816438 unclassified Citrobacter freundii complex 0.01 10 10 S 1686385 Citrobacter sp. BIDMC108 0.00 1 1 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 1 1 S 67827 Citrobacter werkmanii 0.00 1 1 S 1748967 Citrobacter cronae 0.03 30 30 S 2971264 Citrobacter enshiensis 0.01 16 0 S 35703 Citrobacter amalonaticus 0.01 16 16 S1 1261127 Citrobacter amalonaticus Y19 0.00 2 2 S 545 Citrobacter koseri 0.07 73 0 F1 191675 Enterobacteriaceae incertae sedis 0.07 73 2 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.04 41 0 F3 84564 ant endosymbionts 0.03 30 1 G 203804 Candidatus Blochmanniella 0.02 19 6 G1 711328 unclassified Candidatus Blochmanniella 0.01 11 11 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 2 2 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.01 8 8 S 251538 Candidatus Blochmannia ocreatus 0.00 2 0 S 251535 Candidatus Blochmanniella vafra 0.00 2 2 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.01 11 0 G 1699619 Candidatus Westeberhardia 0.01 11 11 S 1594731 Candidatus Westeberhardia cardiocondylae 0.01 14 0 F3 146507 aphid secondary symbionts 0.01 9 9 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 5 0 G 568988 Candidatus Regiella 0.00 5 0 G1 3077955 unclassified Candidatus Regiella 0.00 5 5 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.01 11 0 G 1302410 Candidatus Annandia 0.01 11 11 S 1302411 Candidatus Annandia adelgestsuga 0.00 3 0 G 1906660 Candidatus Mikella 0.00 3 3 S 1778264 Candidatus Mikella endobia 0.00 1 0 G 472825 Candidatus Purcelliella 0.00 1 1 S 472834 Candidatus Purcelliella pentastirinorum 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.03 30 0 G 409304 Candidatus Ishikawella 0.03 30 0 S 168169 Candidatus Ishikawella capsulata 0.03 30 30 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.01 14 0 G 1330545 Lelliottia 0.01 14 14 S 61646 Lelliottia amnigena 0.01 7 0 G 1048757 Candidatus Moranella 0.01 7 7 S 1048758 Candidatus Moranella endobia 0.01 6 6 G 158483 Cedecea 0.01 6 4 G 401618 Candidatus Riesia 0.00 2 2 S 401619 Candidatus Riesia pediculicola 0.00 5 0 G 2303321 Superficieibacter 0.00 5 0 G1 2645744 unclassified Superficieibacter 0.00 5 5 S 3031919 Superficieibacter sp. HKU1 0.00 5 0 G 1177214 Candidatus Profftia 0.00 4 0 G1 2735709 unclassified Candidatus Profftia 0.00 4 4 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.00 3 0 G 2726810 Scandinavium 0.00 3 3 S 1851514 Scandinavium goeteborgense 0.00 2 0 G 83654 Leclercia 0.00 2 0 G1 2627398 unclassified Leclercia 0.00 1 1 S 1920114 Leclercia sp. LSNIH1 0.00 1 1 S 2714951 Leclercia sp. 29361 0.00 2 0 G 1335483 Shimwellia 0.00 2 2 S 563 Shimwellia blattae 0.00 2 0 G 1903434 Atlantibacter 0.00 2 2 S 565 Atlantibacter hermannii 0.00 1 0 G 158851 Trabulsiella 0.00 1 1 S 379893 Trabulsiella odontotermitis 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 1504576 Pseudocitrobacter 0.00 1 1 S 2891570 Pseudocitrobacter corydidari 0.40 429 0 F 2812006 Bruguierivoracaceae 0.40 429 0 G 84565 Sodalis 0.38 403 403 S 2697027 Sodalis ligni 0.02 18 0 S 1486991 Candidatus Sodalis pierantonius 0.02 18 18 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.01 6 0 G1 2636512 unclassified Sodalis 0.01 6 6 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.00 2 2 S 1239307 Sodalis praecaptivus 0.38 409 1 F 1903411 Yersiniaceae 0.24 255 0 G 613 Serratia 0.15 162 162 S 138074 Serratia symbiotica 0.05 50 50 S 614 Serratia liquefaciens 0.02 21 0 S 82996 Serratia plymuthica 0.02 21 21 S1 1006598 Serratia plymuthica RVH1 0.01 15 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.01 15 15 S 2785630 Serratia sp. CMO1 0.01 6 6 S 61652 Serratia rubidaea 0.00 1 1 S 615 Serratia marcescens 0.13 143 0 G 629 Yersinia 0.13 137 0 G1 1649845 Yersinia pseudotuberculosis complex 0.13 137 2 S 632 Yersinia pestis 0.11 118 118 S1 748678 Yersinia pestis str. Pestoides B 0.01 12 12 S1 649716 Yersinia pestis Pestoides G 0.00 4 4 S1 360102 Yersinia pestis Antiqua 0.00 1 1 S1 1035377 Yersinia pestis A1122 0.01 6 6 S 935293 Yersinia entomophaga 0.01 10 10 G 1927833 Candidatus Fukatsuia 0.12 129 4 F 1903414 Morganellaceae 0.04 48 0 G 581 Morganella 0.04 48 48 S 582 Morganella morganii 0.03 29 2 G 637 Arsenophonus 0.01 12 12 S 638 Arsenophonus nasoniae 0.01 10 0 G1 2627083 unclassified Arsenophonus 0.01 6 6 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 4 4 S 3041619 Arsenophonus sp. aPb 0.00 5 5 S 634113 Candidatus Arsenophonus lipoptenae 0.02 18 0 G 626 Xenorhabdus 0.01 10 0 S 40577 Xenorhabdus poinarii 0.01 10 10 S1 1354304 Xenorhabdus poinarii G6 0.01 8 8 S 290110 Xenorhabdus budapestensis 0.01 13 0 G 586 Providencia 0.01 10 10 S 1715285 Candidatus Providencia siddallii 0.00 2 0 G1 2633465 unclassified Providencia 0.00 2 2 S 2939731 Providencia sp. PROV188 0.00 1 0 S 516075 Providencia sneebia 0.00 1 1 S1 1141660 Providencia sneebia DSM 19967 0.01 10 0 G 583 Proteus 0.01 9 9 S 584 Proteus mirabilis 0.00 1 0 S 1574161 Proteus terrae 0.00 1 1 S1 626774 Proteus terrae subsp. cibarius 0.01 7 7 G 29487 Photorhabdus 0.12 128 9 F 1903409 Erwiniaceae 0.05 55 0 G 551 Erwinia 0.04 44 44 S 1922217 Candidatus Erwinia haradaeae 0.01 10 0 G1 2622719 unclassified Erwinia 0.01 10 10 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 55212 Erwinia rhapontici 0.03 34 1 G 53335 Pantoea 0.02 20 20 S 1235990 Candidatus Pantoea carbekii 0.01 6 0 G1 1654067 Pantoea agglomerans group 0.01 6 6 S 549 Pantoea agglomerans 0.00 4 4 S 59814 Pantoea dispersa 0.00 2 2 S 66269 Pantoea stewartii 0.00 1 1 S 1891675 Pantoea alhagi 0.03 28 0 G 32199 Buchnera 0.03 28 23 S 9 Buchnera aphidicola 0.00 3 3 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 1 1 S1 1265370 Buchnera aphidicola (Mindarus keteleerifoliae) 0.00 1 1 S1 2911030 Buchnera aphidicola (Sipha maydis) 0.00 1 0 G 2100764 Mixta 0.00 1 1 S 1615494 Mixta intestinalis 0.00 1 0 G 2997349 Winslowiella 0.00 1 1 S 92490 Winslowiella toletana 0.07 70 1 F 1903410 Pectobacteriaceae 0.05 50 7 G 204037 Dickeya 0.04 39 39 S 1089444 Dickeya solani 0.00 4 4 S 1778540 Dickeya fangzhongdai 0.02 18 0 G 122277 Pectobacterium 0.01 8 8 S 2488639 Pectobacterium versatile 0.01 6 4 S 1905730 Pectobacterium parmentieri 0.00 2 2 S1 561231 Pectobacterium parmentieri WPP163 0.00 2 2 S 180957 Pectobacterium brasiliense 0.00 2 2 S 2485124 Pectobacterium polonicum 0.00 1 0 G 1082702 Lonsdalea 0.00 1 1 S 1082704 Lonsdalea britannica 0.05 51 0 F 1903412 Hafniaceae 0.05 51 50 G 635 Edwardsiella 0.00 1 1 S 67780 Edwardsiella ictaluri 0.01 14 0 F 3120698 Gallaecimonadaceae 0.01 14 0 G 745410 Gallaecimonas 0.01 12 12 S 3029055 Gallaecimonas kandeliae 0.00 2 2 S 2291597 Gallaecimonas mangrovi 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 82984 Pragia 0.00 1 1 S 82985 Pragia fontium 1.04 1112 1 O 72274 Pseudomonadales 1.03 1110 101 F 135621 Pseudomonadaceae 0.93 998 651 G 286 Pseudomonas 0.10 110 12 G1 196821 unclassified Pseudomonas 0.01 14 14 S 2931382 Pseudomonas sp. PIA16 0.01 11 11 S 1649877 Pseudomonas sp. CCOS 191 0.01 6 6 S 2705472 Pseudomonas sp. MTM4 0.01 6 6 S 2954080 Pseudomonas sp. FP1762 0.01 6 6 S 1930532 Pseudomonas sp. CC6-YY-74 0.00 5 5 S 2954078 Pseudomonas sp. FP1740 0.00 5 5 S 2954092 Pseudomonas sp. FP2335 0.00 4 4 S 2762896 Pseudomonas sp. MPDS 0.00 4 4 S 2662034 Pseudomonas sp. 13159349 0.00 4 4 S 2895471 Pseudomonas sp. B21-010 0.00 3 3 S 2954088 Pseudomonas sp. FP2262 0.00 3 3 S 1702250 Pseudomonas sp. IB20 0.00 3 3 S 2025658 Pseudomonas sp. NS1(2017) 0.00 3 3 S 3020843 Pseudomonas sp. Q1-7 0.00 3 3 S 2954094 Pseudomonas sp. FP453 0.00 3 3 S 2871095 Pseudomonas sp. DR48 0.00 2 2 S 3137451 Pseudomonas sp. G.S.17 0.00 2 2 S 1856685 Pseudomonas sp. TCU-HL1 0.00 2 2 S 1500686 Pseudomonas sp. Os17 0.00 2 2 S 2944392 Pseudomonas sp. BYT-5 0.00 2 2 S 2986927 Pseudomonas sp. BT-42-2 0.00 1 1 S 2898441 Pseudomonas sp. J452 0.00 1 1 S 2954084 Pseudomonas sp. FP198 0.00 1 1 S 2895472 Pseudomonas sp. B21-012 0.00 1 1 S 2954101 Pseudomonas sp. FP830 0.00 1 1 S 2921518 Pseudomonas sp. FSL L8-0168 0.06 66 0 G1 136841 Pseudomonas aeruginosa group 0.06 66 63 S 287 Pseudomonas aeruginosa 0.00 3 3 S1 381754 Pseudomonas aeruginosa PA7 0.05 54 2 G1 136845 Pseudomonas putida group 0.03 34 34 S 303 Pseudomonas putida 0.02 18 18 S 78327 Pseudomonas mosselii 0.03 27 0 G1 136843 Pseudomonas fluorescens group 0.01 11 1 S 47883 Pseudomonas synxantha 0.01 10 10 S1 96901 Pseudomonas synxantha BG33R 0.01 6 6 S 47878 Pseudomonas azotoformans 0.00 5 5 S 183795 Pseudomonas mediterranea 0.00 3 3 S 76758 Pseudomonas orientalis 0.00 1 1 S 76761 Pseudomonas veronii 0.00 1 1 S 294 Pseudomonas fluorescens 0.02 25 25 S 2738125 Pseudomonas hefeiensis 0.01 10 10 S 46677 Pseudomonas agarici 0.01 9 9 S 437900 Pseudomonas marincola 0.01 8 8 S 1302376 Candidatus Pseudomonas adelgestsugas 0.01 7 7 S 364197 Pseudomonas pohangensis 0.01 7 7 S 122355 Pseudomonas psychrophila 0.01 6 6 S 2599595 Pseudomonas eucalypticola 0.00 5 0 G1 136849 Pseudomonas syringae group 0.00 5 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 5 2 S 317 Pseudomonas syringae 0.00 2 2 S1 1357285 Pseudomonas syringae CC457 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 2 2 S 1245526 Pseudomonas guangdongensis 0.00 2 2 S 158627 Pseudomonas graminis 0.00 2 2 S 65741 Pseudomonas knackmussii 0.00 1 1 S 2954098 Pseudomonas wuhanensis 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 380021 Pseudomonas protegens 0.00 1 1 S 2681983 Pseudomonas bijieensis 0.00 1 1 S 2219225 Pseudomonas asiatica 0.00 1 1 S 244566 Pseudomonas lurida 0.00 1 1 S 321846 Pseudomonas simiae 0.00 1 1 S 930166 Pseudomonas brassicacearum 0.01 6 0 G 1654787 Thiopseudomonas 0.01 6 6 S 1697053 Thiopseudomonas alkaliphila 0.00 3 2 G 2758906 Entomomonas 0.00 1 1 S 2785331 Entomomonas asaccharolytica 0.00 2 0 G 2901164 Stutzerimonas 0.00 2 0 G1 136846 Stutzerimonas stutzeri group 0.00 2 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 2 2 S 316 Stutzerimonas stutzeri 0.00 1 0 F 2887365 Marinobacteraceae 0.00 1 0 G 2742 Marinobacter 0.00 1 0 G1 83889 unclassified Marinobacter 0.00 1 1 S 3035454 Marinobacter sp. LA51 0.48 514 0 O 135623 Vibrionales 0.48 514 23 F 641 Vibrionaceae 0.38 413 22 G 662 Vibrio 0.25 271 0 S 52443 Vibrio tapetis 0.25 271 271 S1 1671868 Vibrio tapetis subsp. tapetis 0.06 69 69 S 666 Vibrio cholerae 0.02 25 0 G1 2614977 unclassified Vibrio 0.02 20 20 S 2661921 Vibrio sp. THAF191c 0.00 3 3 S 2819099 Vibrio sp. SCSIO 43155 0.00 1 1 S 2942997 Vibrio sp. J383 0.00 1 1 S 2819103 Vibrio sp. SCSIO 43009 0.01 12 1 G1 717610 Vibrio harveyi group 0.01 6 5 S 670 Vibrio parahaemolyticus 0.00 1 1 S1 1429044 Vibrio parahaemolyticus UCM-V493 0.00 5 5 S 669 Vibrio harveyi 0.00 5 0 G1 87806 environmental samples 0.00 5 5 S 114054 uncultured Vibrio sp. 0.00 3 3 S 674 Vibrio mimicus 0.00 2 2 S 2572923 Vibrio taketomensis 0.00 2 1 S 55601 Vibrio anguillarum 0.00 1 1 S1 42323 Vibrio anguillarum serovar O1 0.00 1 1 S 2662262 Vibrio algicola 0.00 1 0 G1 1891919 Vibrio oreintalis group 0.00 1 1 S 29498 Vibrio tubiashii 0.07 74 2 G 657 Photobacterium 0.06 61 27 S 553611 Photobacterium leiognathi 0.03 34 34 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.01 11 0 S 38293 Photobacterium damselae 0.01 8 8 S1 38294 Photobacterium damselae subsp. piscicida 0.00 3 3 S1 85581 Photobacterium damselae subsp. damselae 0.00 3 0 G 511678 Aliivibrio 0.00 3 0 S 40269 Aliivibrio salmonicida 0.00 3 3 S1 316275 Aliivibrio salmonicida LFI1238 0.00 1 0 G 51366 Salinivibrio 0.00 1 1 S 1908198 Salinivibrio kushneri 0.40 433 0 O 135625 Pasteurellales 0.40 433 23 F 712 Pasteurellaceae 0.30 325 51 G 724 Haemophilus 0.25 264 263 S 729 Haemophilus parainfluenzae 0.00 1 1 S1 888828 Haemophilus parainfluenzae ATCC 33392 0.01 6 6 S 735 Haemophilus parahaemolyticus 0.00 4 4 S 727 Haemophilus influenzae 0.05 51 51 G 416916 Aggregatibacter 0.01 9 0 G 75984 Mannheimia 0.00 4 4 S 85402 Mannheimia granulomatis 0.00 3 3 S 85404 Mannheimia varigena 0.00 2 2 S 75985 Mannheimia haemolytica 0.01 9 0 G 713 Actinobacillus 0.01 7 0 S 718 Actinobacillus equuli 0.01 7 7 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 2 2 S 157339 Actinobacillus arthritidis 0.00 5 0 G 2899790 Mergibacter 0.00 5 5 S 221402 Mergibacter septicus 0.00 4 1 G 745 Pasteurella 0.00 3 2 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.00 2 0 G 155493 Gallibacterium 0.00 2 2 S 750 Gallibacterium anatis 0.00 2 0 G 214906 Histophilus 0.00 2 2 S 731 Histophilus somni 0.00 1 0 G 109471 Bisgaardia 0.00 1 1 S 109472 Bisgaardia hudsonensis 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 0.00 1 0 G 2094023 Glaesserella 0.00 1 1 S 738 Glaesserella parasuis 0.36 384 0 O 135624 Aeromonadales 0.36 384 44 F 84642 Aeromonadaceae 0.20 220 16 G 642 Aeromonas 0.16 175 175 S 654 Aeromonas veronii 0.01 12 12 S 652 Aeromonas schubertii 0.00 5 0 G1 257493 unclassified Aeromonas 0.00 5 5 S 2560029 Aeromonas sp. 2692-1 0.00 4 1 S 651 Aeromonas media 0.00 3 3 S1 1208104 Aeromonas media WS 0.00 4 4 S 196024 Aeromonas dhakensis 0.00 2 2 S 645 Aeromonas salmonicida 0.00 1 1 S 648 Aeromonas caviae 0.00 1 1 S 73010 Aeromonas encheleia 0.10 104 0 G 225143 Oceanisphaera 0.10 104 104 S 1903694 Oceanisphaera avium 0.01 11 0 G 43947 Tolumonas 0.01 8 8 S 43948 Tolumonas auensis 0.00 3 0 G1 263764 environmental samples 0.00 3 3 S 263765 uncultured Tolumonas sp. 0.00 3 0 G 347533 Zobellella 0.00 3 3 S 347534 Zobellella denitrificans 0.00 2 0 G 2802288 Dongshaea 0.00 2 2 S 2047966 Dongshaea marina 0.28 298 0 O 135615 Cardiobacteriales 0.28 298 1 F 868 Cardiobacteriaceae 0.27 291 3 G 2717 Cardiobacterium 0.13 144 144 S 2718 Cardiobacterium hominis 0.13 144 0 G1 2648856 unclassified Cardiobacterium 0.13 144 144 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.01 6 0 G 13275 Suttonella 0.01 6 0 G1 2908647 unclassified Suttonella 0.01 6 6 S 2908648 Suttonella sp. R2A3 0.23 242 0 O 2887326 Moraxellales 0.23 242 3 F 468 Moraxellaceae 0.15 162 53 G 469 Acinetobacter 0.08 88 9 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.05 52 51 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.02 25 25 S 470 Acinetobacter baumannii 0.00 1 1 S 471 Acinetobacter calcoaceticus 0.00 1 1 S 106654 Acinetobacter nosocomialis 0.01 13 13 S 202956 Acinetobacter towneri 0.00 4 2 G1 196816 unclassified Acinetobacter 0.00 2 2 S 2743575 Acinetobacter sp. NEB 394 0.00 3 3 S 40214 Acinetobacter johnsonii 0.00 1 1 S 756892 Acinetobacter indicus 0.06 65 16 G 475 Moraxella 0.04 45 45 S 2904120 Moraxella nasibovis 0.00 2 0 G1 2685852 unclassified Moraxella 0.00 2 2 S 2904123 Moraxella sp. ZY210820 0.00 1 1 S 34062 Moraxella osloensis 0.00 1 1 S 90241 Moraxella lincolnii 0.01 12 1 G 497 Psychrobacter 0.01 11 11 G1 196806 unclassified Psychrobacter 0.22 238 6 O 135622 Alteromonadales 0.11 113 0 F 267888 Pseudoalteromonadaceae 0.10 105 0 G 2834759 Flocculibacter 0.10 105 105 S 2744479 Flocculibacter collagenilyticus 0.01 8 0 G 53246 Pseudoalteromonas 0.01 8 0 G1 194690 unclassified Pseudoalteromonas 0.01 8 8 S 2785910 Pseudoalteromonas sp. A41-2 0.07 70 0 F 72275 Alteromonadaceae 0.06 65 0 F1 2903219 Alteromonas/Salinimonas group 0.06 65 0 G 226 Alteromonas 0.06 64 0 G1 2614992 unclassified Alteromonas 0.06 63 63 S 2267264 Alteromonas sp. RKMC-009 0.00 1 1 S 2961948 Alteromonas sp. LMIT006 0.00 1 1 S 28108 Alteromonas macleodii 0.00 2 1 G 261825 Agarivorans 0.00 1 0 G1 2636026 unclassified Agarivorans 0.00 1 1 S 2937286 Agarivorans sp. TSD2052 0.00 2 2 G 1858563 Alkalimarinus 0.00 1 1 G 1172191 Catenovulum 0.04 46 0 F 267890 Shewanellaceae 0.04 46 17 G 22 Shewanella 0.01 15 15 S 62322 Shewanella baltica 0.01 7 6 G1 196818 unclassified Shewanella 0.00 1 1 S 2601269 Shewanella sp. YLB-09 0.00 3 3 S 712036 Shewanella dokdonensis 0.00 3 3 S 2018305 Shewanella bicestrii 0.00 1 1 S 2520507 Shewanella maritima 0.00 2 0 F 267892 Ferrimonadaceae 0.00 2 0 G 44011 Ferrimonas 0.00 2 2 S 2724191 Ferrimonas lipolytica 0.00 1 0 F 267889 Colwelliaceae 0.00 1 0 G 1518149 Thalassotalea 0.00 1 0 G1 2614972 unclassified Thalassotalea 0.00 1 1 S 2769490 Thalassotalea sp. LPB0316 0.12 131 0 C1 118884 Gammaproteobacteria incertae sedis 0.11 115 0 G 1076625 Candidatus Steffania 0.11 115 115 S 1076626 Candidatus Steffania adelgidicola 0.01 7 0 C2 32036 sulfur-oxidizing symbionts 0.00 4 0 G 2686004 Candidatus Vondammii 0.00 4 0 G1 2687300 unclassified Candidatus Vondammii 0.00 4 4 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 2 2 S 2738852 Candidatus Ruthia endofausta 0.00 1 0 G 2732587 Candidatus Vesicomyosocius 0.00 1 0 G1 2763321 unclassified Candidatus Vesicomyosocius 0.00 1 1 S 2732590 Candidatus Vesicomyosocius sp. SY067_SCS001 0.00 5 0 G 198346 Candidatus Palibaumannia 0.00 5 5 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 3 0 G 2738850 Candidatus Reidiella 0.00 3 3 S 2738883 Candidatus Reidiella endopervernicosa 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.05 58 1 O 135619 Oceanospirillales 0.03 28 1 F 28256 Halomonadaceae 0.02 22 0 G 2745 Halomonas 0.01 11 11 G1 2609666 unclassified Halomonas 0.01 11 11 S 3031727 Halomonas piscis 0.00 4 0 F1 114403 Zymobacter group 0.00 3 0 G 235572 Candidatus Portiera 0.00 3 3 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.00 1 1 G 504090 Kushneria 0.02 21 1 F 135620 Oceanospirillaceae 0.01 7 7 G 515417 Amphritea 0.00 5 0 G 459520 Neptuniibacter 0.00 5 5 S 651666 Neptuniibacter halophilus 0.00 4 0 G 267849 Nitrincola 0.00 4 4 S 2614693 Nitrincola iocasae 0.00 3 1 G 28253 Marinomonas 0.00 2 2 S 2773454 Marinomonas algicola 0.00 1 0 G 187492 Thalassolituus 0.00 1 1 S 187493 Thalassolituus oleivorans 0.00 4 0 F 2823145 Pleioneaceae 0.00 4 0 G 1502941 Pleionea 0.00 4 4 S 3070815 Pleionea litopenaei 0.00 2 0 F 255527 Saccharospirillaceae 0.00 2 0 G 230494 Reinekea 0.00 2 2 S 1336806 Reinekea forsetii 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 0 G 3020833 Isoalcanivorax 0.00 1 0 S 1306787 Isoalcanivorax pacificus 0.00 1 1 S1 391936 Isoalcanivorax pacificus W11-5 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 1 G 305899 Endozoicomonas 0.05 54 0 O 135613 Chromatiales 0.04 46 1 F 1046 Chromatiaceae 0.02 19 0 G 85072 Allochromatium 0.02 19 19 S 553982 Allochromatium tepidum 0.01 16 0 G 156885 Thioflavicoccus 0.01 16 0 S 80679 Thioflavicoccus mobilis 0.01 16 16 S1 765912 Thioflavicoccus mobilis 8321 0.01 8 7 G 1056 Thiocapsa 0.00 1 1 S 521689 Thiocapsa bogorovii 0.00 1 0 G 13724 Thiocystis 0.00 1 0 S 73141 Thiocystis violascens 0.00 1 1 S1 765911 Thiocystis violascens DSM 198 0.00 1 0 G 1980513 Candidatus Nitrosoglobus 0.00 1 1 S 1630141 Candidatus Nitrosoglobus terrae 0.01 7 0 F 72276 Ectothiorhodospiraceae 0.01 6 1 G 1335745 Spiribacter 0.00 3 0 G1 2629425 unclassified Spiribacter 0.00 3 3 S 2666185 Spiribacter sp. 2438 0.00 2 0 S 1335746 Spiribacter salinus 0.00 2 2 S1 1260251 Spiribacter salinus M19-40 0.00 1 1 G 1051 Ectothiorhodospira 0.00 1 0 F 2035710 Thioalkalibacteraceae 0.00 1 0 G 2035712 Guyparkeria 0.00 1 1 S 47960 Guyparkeria halophila 0.03 32 0 O 72273 Thiotrichales 0.01 13 3 F 135616 Piscirickettsiaceae 0.01 6 0 G 933 Thiomicrospira 0.01 6 0 G1 2643099 unclassified Thiomicrospira 0.01 6 6 S 3035472 Thiomicrospira sp. R3 0.00 3 0 G 2781121 Thiosulfatimonas 0.00 3 3 S 2675054 Thiosulfatimonas sediminis 0.00 1 1 G 2039723 Thiomicrorhabdus 0.01 9 0 F 2056687 Fastidiosibacteraceae 0.01 9 0 G 2056696 Cysteiniphilum 0.01 9 0 G1 2610889 unclassified Cysteiniphilum 0.01 9 9 S 2975055 Cysteiniphilum sp. QT6929 0.01 8 0 F 135617 Thiotrichaceae 0.00 5 5 G 1030 Thiothrix 0.00 3 0 G 1021 Beggiatoa 0.00 3 3 S 288004 Beggiatoa leptomitoformis 0.00 2 0 F 34064 Francisellaceae 0.00 2 2 G 262 Francisella 0.02 17 0 O 118969 Legionellales 0.01 10 0 F 444 Legionellaceae 0.01 10 0 G 445 Legionella 0.01 8 0 S 446 Legionella pneumophila 0.01 8 7 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 1 1 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 1 1 S 450 Legionella longbeachae 0.00 1 1 S 45065 Legionella geestiana 0.01 7 2 F 118968 Coxiellaceae 0.00 2 0 G 776 Coxiella 0.00 1 1 S 777 Coxiella burnetii 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 2 0 G 254245 Aquicella 0.00 1 1 S 254246 Aquicella lusitana 0.00 1 1 S 254247 Aquicella siphonis 0.00 1 1 G 59195 Rickettsiella 0.01 14 0 O 1240482 Orbales 0.01 14 0 F 1240483 Orbaceae 0.01 14 0 G 2894762 Zophobihabitans 0.01 14 14 S 1635327 Zophobihabitans entericus 0.01 13 0 O 135618 Methylococcales 0.01 13 3 F 403 Methylococcaceae 0.00 4 0 G 39773 Methylomicrobium 0.00 4 0 S 39775 Methylomicrobium album 0.00 4 4 S1 686340 Methylomicrobium album BG8 0.00 2 0 G 73778 Methylocaldum 0.00 2 2 S 1432792 Methylocaldum marinum 0.00 2 0 G 1295378 Methylogaea 0.00 2 2 S 1295382 Methylogaea oryzae 0.00 1 1 G 416 Methylomonas 0.00 1 0 G 3135206 Candidatus Methylocalor 0.00 1 1 S 3108543 Candidatus Methylocalor cossyra 0.01 13 0 O 1706369 Cellvibrionales 0.00 5 0 F 1706371 Cellvibrionaceae 0.00 4 0 G 10 Cellvibrio 0.00 4 0 G1 2624793 unclassified Cellvibrio 0.00 4 4 S 1987723 Cellvibrio sp. PSBB006 0.00 1 1 G 2425 Teredinibacter 0.00 4 3 F 1706372 Halieaceae 0.00 1 0 G 3040948 Candidatus Paraluminiphilus 0.00 1 1 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 3 0 F 1706375 Spongiibacteraceae 0.00 3 0 G 1084558 Oceanicoccus 0.00 3 3 S 716816 Oceanicoccus sagamiensis 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 2745199 Microbulbifer sp. YPW1 0.01 7 0 O 3084968 Thiohalomonadales 0.01 7 0 F 3084969 Thiohalomonadaceae 0.01 7 0 G 2034504 Sulfurivermis 0.01 7 7 S 1972068 Sulfurivermis fontis 0.00 4 0 O 2887327 Kangiellales 0.00 4 0 F 1920240 Kangiellaceae 0.00 4 0 G 261963 Kangiella 0.00 4 4 S 1144748 Kangiella sediminilitoris 0.00 4 0 O 2975284 Candidatus Comchoanobacterales 0.00 4 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 4 0 G 2975286 Candidatus Comchoanobacter 0.00 4 4 S 2919598 Candidatus Comchoanobacter bicostacola 0.00 3 0 O 1775403 Nevskiales 0.00 3 1 F 568386 Nevskiaceae 0.00 2 0 G 413435 Solimonas 0.00 2 0 G1 2637139 unclassified Solimonas 0.00 2 2 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 1 F 1692041 Acidiferrobacteraceae 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 650377 endosymbiont of Euscepes postfasciatus 5.87 6299 121 C 28216 Betaproteobacteria 3.16 3394 15 O 80840 Burkholderiales 2.35 2520 11 F 119060 Burkholderiaceae 2.18 2340 0 G 47670 Lautropia 2.18 2340 2340 S 47671 Lautropia mirabilis 0.07 79 2 G 32008 Burkholderia 0.04 44 0 G1 111527 pseudomallei group 0.04 38 5 S 28450 Burkholderia pseudomallei 0.03 33 33 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.01 6 0 S 57975 Burkholderia thailandensis 0.01 6 6 S1 1249664 Burkholderia thailandensis 34 0.03 28 0 G1 87882 Burkholderia cepacia complex 0.02 19 18 S 152500 Burkholderia dolosa 0.00 1 1 S1 1385930 Burkholderia dolosa PC543 0.00 5 5 S 488447 Burkholderia contaminans 0.00 2 2 S 87883 Burkholderia multivorans 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 1 S 95485 Burkholderia stabilis 0.00 5 0 G1 2613784 unclassified Burkholderia 0.00 5 5 S 1494466 Burkholderia sp. FERM BP-3421 0.05 51 2 G 48736 Ralstonia 0.04 48 0 G1 3116862 Ralstonia solanacearum species complex 0.04 48 48 S 305 Ralstonia solanacearum 0.00 1 1 S 105219 Ralstonia mannitolilytica 0.01 14 0 G 2038280 Robbsia 0.01 14 0 G1 2636574 unclassified Robbsia 0.01 14 14 S 3149231 Robbsia sp. KACC 23696 0.01 13 1 G 44013 Polynucleobacter 0.01 12 12 S 576610 Polynucleobacter necessarius 0.00 5 2 G 1822464 Paraburkholderia 0.00 2 2 S 2571748 Paraburkholderia acidisoli 0.00 1 1 S 273251 Paraburkholderia sabiae 0.00 2 1 G 106589 Cupriavidus 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.00 2 2 G 1810868 Mycoavidus 0.00 1 1 G 93217 Pandoraea 0.00 1 0 G 131079 Limnobacter 0.00 1 1 S 131080 Limnobacter thiooxidans 0.00 1 1 G 1827195 Caballeronia 0.61 657 51 F 75682 Oxalobacteraceae 0.38 403 8 G 401469 Undibacterium 0.37 393 92 G1 2630295 unclassified Undibacterium 0.28 301 301 S 3048609 Undibacterium sp. CCC3.4 0.00 2 2 S 401471 Undibacterium parvum 0.14 153 139 G 29580 Janthinobacterium 0.01 12 0 G1 2610881 unclassified Janthinobacterium 0.01 11 11 S 3065910 Janthinobacterium sp. J1-1 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.00 2 2 S 29581 Janthinobacterium lividum 0.03 32 12 F1 2895353 Telluria group 0.02 20 2 G 149698 Massilia 0.01 10 10 S 945844 Massilia oculi 0.01 7 0 G1 2609279 unclassified Massilia 0.00 3 3 S 1707785 Massilia sp. WG5 0.00 3 3 S 3064278 Massilia sp. R2A-15 0.00 1 1 S 2709303 Massilia sp. Se16.2.3 0.00 1 1 S 457921 Massilia varians 0.01 11 0 G 884214 Candidatus Zinderia 0.01 11 0 G1 3077950 unclassified Candidatus Zinderia 0.01 11 11 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 3 0 G 1344552 Noviherbaspirillum 0.00 3 0 G1 2617509 unclassified Noviherbaspirillum 0.00 3 3 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 2 0 G 1229970 Glaciimonas 0.00 2 0 G1 2644401 unclassified Glaciimonas 0.00 2 2 S 2807626 Glaciimonas sp. PAMC28666 0.00 1 0 G 846 Oxalobacter 0.00 1 1 S 933080 Oxalobacter vibrioformis 0.00 1 1 G 963 Herbaspirillum 0.15 160 5 F 80864 Comamonadaceae 0.09 99 99 G 80865 Delftia 0.04 42 19 G 283 Comamonas 0.01 9 0 S 32013 Comamonas terrigena 0.01 9 9 S1 1219032 Comamonas terrigena NBRC 13299 0.01 8 8 S 2743470 Comamonas antarctica 0.01 6 6 S 363952 Comamonas thiooxydans 0.01 8 0 G 3051137 Paracidovorax 0.01 8 8 S 80867 Paracidovorax avenae 0.00 2 1 G 47420 Hydrogenophaga 0.00 1 1 S 2716225 Hydrogenophaga crocea 0.00 2 0 G 665874 Limnohabitans 0.00 2 0 G1 2626134 unclassified Limnohabitans 0.00 2 2 S 1678128 Limnohabitans sp. 63ED37-2 0.00 1 1 G 28065 Rhodoferax 0.00 1 0 G 1649468 Melaminivora 0.00 1 1 S 2109913 Melaminivora suipulveris 0.03 34 2 F 506 Alcaligenaceae 0.01 12 10 G 507 Alcaligenes 0.00 2 2 S 511 Alcaligenes faecalis 0.01 12 11 G 222 Achromobacter 0.00 1 1 S 217204 Achromobacter insolitus 0.00 3 1 G 90243 Oligella 0.00 2 2 S 90244 Oligella ureolytica 0.00 2 0 G 1472344 Basilea 0.00 2 0 S 1472345 Basilea psittacipulmonis 0.00 2 2 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 2 0 G 305976 Pusillimonas 0.00 2 0 G1 2640016 unclassified Pusillimonas 0.00 2 2 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 1 0 G 29574 Taylorella 0.00 1 1 S 29575 Taylorella equigenitalis 0.00 5 0 O1 224471 Burkholderiales genera incertae sedis 0.00 4 3 G 32012 Thiomonas 0.00 1 0 G1 2625466 unclassified Thiomonas 0.00 1 1 S 1050370 Thiomonas sp. X19 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.00 3 0 F 2975441 Sphaerotilaceae 0.00 2 0 G 34102 Sphaerotilus 0.00 2 2 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 G 93681 Roseateles 2.54 2732 15 O 206351 Neisseriales 2.52 2706 1256 F 481 Neisseriaceae 0.95 1024 210 G 482 Neisseria 0.26 283 283 S 495 Neisseria elongata 0.15 156 133 S 487 Neisseria meningitidis 0.02 23 23 S1 942513 Neisseria meningitidis WUE 2594 0.14 152 152 S 28449 Neisseria subflava 0.09 100 100 S 485 Neisseria gonorrhoeae 0.04 47 47 S 607712 Neisseria shayeganii 0.02 22 0 G1 2623750 unclassified Neisseria 0.01 13 13 S 2972775 Neisseria sp. Marseille-Q5346 0.00 3 0 S 641148 Neisseria sp. oral taxon 014 0.00 3 3 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.00 3 3 S 655307 Neisseria sp. KEM232 0.00 3 3 S 2912675 Neisseria sp. Dent CA1/247 0.02 18 18 S 1853278 Neisseria chenwenguii 0.01 13 13 S 486 Neisseria lactamica 0.01 9 9 S 267212 Neisseria bacilliformis 0.01 7 7 S 484 Neisseria flavescens 0.00 2 2 S 194197 Neisseria dentiae 0.00 2 2 S 1470200 Neisseria arctica 0.00 1 1 S 2995413 Neisseria leonii 0.00 1 1 S 493 Neisseria canis 0.00 1 1 S 490 Neisseria sicca 0.34 361 0 G 32257 Kingella 0.33 355 355 S 505 Kingella oralis 0.00 4 4 S 502 Kingella denitrificans 0.00 2 2 S 1522312 Kingella negevensis 0.02 25 0 G 538 Eikenella 0.02 24 24 S 539 Eikenella corrodens 0.00 1 1 S 2528037 Eikenella exigua 0.01 14 14 G 59 Vitreoscilla 0.01 14 0 G 2593687 Aquella 0.01 14 14 S 2067065 Aquella oligotrophica 0.00 3 0 G 71 Simonsiella 0.00 3 3 S 72 Simonsiella muelleri 0.00 3 0 G 334107 Conchiformibius 0.00 3 3 S 153493 Conchiformibius steedae 0.00 2 0 G 1193515 Snodgrassella 0.00 2 2 S 2946699 Snodgrassella communis 0.00 2 0 G 2898489 Paralysiella 0.00 2 2 S 2809020 Paralysiella testudinis 0.00 2 0 G 2944815 Wielerella 0.00 2 2 S 2917790 Wielerella bovis 0.01 7 1 F 2897177 Chitinibacteraceae 0.00 4 4 G 230666 Chitinibacter 0.00 1 0 G 240411 Chitinimonas 0.00 1 1 S 2594795 Chitinimonas arctica 0.00 1 0 G 1055692 Chitinolyticbacter 0.00 1 1 S 682798 Chitinolyticbacter meiyuanensis 0.00 4 0 F 2897176 Aquaspirillaceae 0.00 3 0 G 57479 Microvirgula 0.00 3 3 S 57480 Microvirgula aerodenitrificans 0.00 1 0 G 168470 Laribacter 0.00 1 1 S 168471 Laribacter hongkongensis 0.02 25 5 O 32003 Nitrosomonadales 0.01 8 4 F 206379 Nitrosomonadaceae 0.00 4 1 G 914 Nitrosomonas 0.00 1 1 S 915 Nitrosomonas europaea 0.00 1 0 S 916 Nitrosomonas eutropha 0.00 1 1 S1 335283 Nitrosomonas eutropha C91 0.00 1 0 G1 2609265 unclassified Nitrosomonas 0.00 1 1 S 261292 Nitrosomonas sp. Is79A3 0.00 5 0 F 32011 Methylophilaceae 0.00 4 0 G 359407 Methylotenera 0.00 4 0 S 359408 Methylotenera mobilis 0.00 4 4 S1 583345 Methylotenera mobilis JLW8 0.00 1 1 G 1679002 Candidatus Methylopumilus 0.00 3 0 F 2008790 Thiobacillaceae 0.00 2 0 G 1938335 Sulfuritortus 0.00 2 2 S 1914471 Sulfuritortus calidifontis 0.00 1 0 G 919 Thiobacillus 0.00 1 0 G1 2646513 unclassified Thiobacillus 0.00 1 1 S 3110231 Thiobacillus sp. SCUT-2 0.00 2 0 F 2008793 Sterolibacteriaceae 0.00 2 0 G 3050898 Sulfuricystis 0.00 2 2 S 2211108 Sulfuricystis multivorans 0.00 2 0 F 2772226 Sulfuricellaceae 0.00 2 1 G 1778653 Sulfuriferula 0.00 1 0 G1 2637784 unclassified Sulfuriferula 0.00 1 1 S 1985873 Sulfuriferula sp. AH1 0.01 14 0 O 206389 Rhodocyclales 0.01 11 1 F 2008794 Zoogloeaceae 0.01 10 0 G 2891294 Nitrogeniibacter 0.01 10 10 S 2016596 Nitrogeniibacter mangrovi 0.00 3 1 F 2008795 Azonexaceae 0.00 1 0 G 73029 Dechloromonas 0.00 1 0 G1 2633351 unclassified Dechloromonas 0.00 1 1 S 447588 Dechloromonas sp. A34 0.00 1 0 G 88875 Ferribacterium 0.00 1 1 S 76259 Ferribacterium limneticum 0.01 11 1 C1 119066 Betaproteobacteria incertae sedis 0.01 6 0 G 1301080 Candidatus Nasuia 0.01 6 6 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 2 0 G 33055 Candidatus Kinetoplastibacterium 0.00 1 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.00 1 1 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 0.00 1 1 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 2 1 G 1381133 Candidatus Profftella 0.00 1 1 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.00 2 0 O 1442155 Ferrovales 0.00 2 0 F 1442156 Ferrovaceae 0.00 2 0 G 416212 Ferrovum 0.00 2 2 S 416213 Ferrovum myxofaciens 5.17 5549 67 C 28211 Alphaproteobacteria 3.56 3820 5 O 204441 Rhodospirillales 3.49 3747 0 F 2844601 Stellaceae 3.49 3747 0 G 93 Stella 3.49 3747 3747 S 94 Stella humosa 0.03 30 0 F 2690195 Elioraeaceae 0.03 30 0 G 457933 Elioraea 0.03 30 30 S 2843330 Elioraea tepida 0.03 28 2 F 433 Acetobacteraceae 0.02 20 0 G 512381 Acidisoma 0.02 20 0 G1 2634065 unclassified Acidisoma 0.02 20 20 S 3040935 Acidisoma sp. PAMC 29798 0.00 2 0 G 434 Acetobacter 0.00 2 2 S 438 Acetobacter pasteurianus 0.00 2 0 G 504465 Rhodovastum 0.00 2 2 S 504468 Rhodovastum atsumiense 0.00 1 0 G 153497 Kozakia 0.00 1 1 S 153496 Kozakia baliensis 0.00 1 0 G 1434011 Komagataeibacter 0.00 1 1 S 215221 Komagataeibacter rhaeticus 0.01 8 0 F 41295 Rhodospirillaceae 0.01 7 0 G 111830 Defluviicoccus 0.01 7 7 S 111831 Defluviicoccus vanus 0.00 1 0 G 1263978 Candidatus Endolissoclinum 0.00 1 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 528244 Azospirillum thiophilum 0.00 1 0 F 2844864 Thalassobaculaceae 0.00 1 0 G 526215 Thalassobaculum 0.00 1 0 G1 2632499 unclassified Thalassobaculum 0.00 1 1 S 3100173 Thalassobaculum sp. OXR-137 1.32 1413 8 O 356 Hyphomicrobiales 1.10 1179 705 F 119045 Methylobacteriaceae 0.40 434 306 G 407 Methylobacterium 0.05 52 0 S 31998 Methylobacterium radiotolerans 0.05 52 52 S1 426355 Methylobacterium radiotolerans JCM 2831 0.03 31 31 S 410 Methylobacterium organophilum 0.03 27 12 G1 2615210 unclassified Methylobacterium 0.01 6 6 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 5 5 S 2984843 Methylobacterium sp. FF17 0.00 4 4 S 426117 Methylobacterium sp. 4-46 0.01 10 10 S 570505 Methylobacterium bullatum 0.00 2 2 S 270351 Methylobacterium aquaticum 0.00 2 2 S 1775910 Methylobacterium indicum 0.00 1 0 S 114616 Methylobacterium nodulans 0.00 1 1 S1 460265 Methylobacterium nodulans ORS 2060 0.00 1 1 S 334852 Methylobacterium oryzae 0.00 1 1 S 2051553 Methylobacterium currus 0.00 1 1 S 2202827 Methylobacterium terrae 0.03 36 33 G 186650 Microvirga 0.00 2 2 S 2651334 Microvirga thermotolerans 0.00 1 1 S 864069 Microvirga lotononidis 0.00 4 4 G 2282523 Methylorubrum 0.18 196 0 F 82115 Rhizobiaceae 0.18 194 191 F1 227290 Rhizobium/Agrobacterium group 0.00 3 2 G 379 Rhizobium 0.00 1 0 S 384 Rhizobium leguminosarum 0.00 1 0 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 1 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 1 0 G 34019 Liberibacter 0.00 1 0 S 309868 Candidatus Liberibacter americanus 0.00 1 1 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 106591 Ensifer 0.00 1 1 S 106592 Ensifer adhaerens 0.01 15 0 F 69277 Phyllobacteriaceae 0.01 14 2 G 68287 Mesorhizobium 0.01 10 10 S 2725666 Mesorhizobium terrae 0.00 2 0 G1 325217 unclassified Mesorhizobium 0.00 2 2 S 2493668 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 0.00 1 0 G 2911176 Aquibium 0.00 1 1 S 1670800 Aquibium oceanicum 0.00 3 1 F 41294 Nitrobacteraceae 0.00 2 0 G 374 Bradyrhizobium 0.00 1 1 S 83627 Bradyrhizobium commune 0.00 1 1 S 255045 Bradyrhizobium canariense 0.00 3 0 F 45401 Hyphomicrobiaceae 0.00 3 0 G 1484898 Methyloceanibacter 0.00 3 0 G1 2617503 unclassified Methyloceanibacter 0.00 3 3 S 2170729 Methyloceanibacter sp. wino2 0.00 2 0 F 2831106 Devosiaceae 0.00 2 2 G 46913 Devosia 0.00 2 0 F 255475 Aurantimonadaceae 0.00 2 2 G 414371 Aureimonas 0.00 1 0 F 2831100 Boseaceae 0.00 1 1 G 85413 Bosea 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 212791 Enhydrobacter 0.00 1 0 G1 2632691 unclassified Enhydrobacter 0.00 1 1 S 1894999 Enhydrobacter sp. 0.00 1 0 F 118882 Brucellaceae 0.00 1 0 F1 2826938 Brucella/Ochrobactrum group 0.00 1 1 G 234 Brucella 0.09 102 0 O 204458 Caulobacterales 0.09 102 0 F 76892 Caulobacteraceae 0.09 100 12 G 41275 Brevundimonas 0.08 88 0 G1 2622653 unclassified Brevundimonas 0.08 88 88 S 2560058 Brevundimonas sp. Bb-A 0.00 2 0 G 75 Caulobacter 0.00 2 2 S 155892 Caulobacter vibrioides 0.06 67 2 O 204455 Rhodobacterales 0.06 62 9 F 31989 Paracoccaceae 0.05 50 49 G 265 Paracoccus 0.00 1 1 S 147645 Paracoccus yeei 0.00 2 0 G 2946607 Neotabrizicola 0.00 2 2 S 2807096 Neotabrizicola shimadae 0.00 1 0 G 2831925 Pukyongiella 0.00 1 1 S 2605946 Pukyongiella litopenaei 0.00 3 2 F 2854170 Roseobacteraceae 0.00 1 0 G 875170 Celeribacter 0.00 1 0 G1 1188777 environmental samples 0.00 1 1 S 1303376 uncultured Celeribacter sp. 0.04 46 4 O 204457 Sphingomonadales 0.03 28 2 F 41297 Sphingomonadaceae 0.02 26 8 G 13687 Sphingomonas 0.01 14 0 G1 196159 unclassified Sphingomonas 0.01 13 13 S 3114300 Sphingomonas sp. M1-B02 0.00 1 1 S 3078265 Sphingomonas sp. Y38-1Y 0.00 4 4 S 1813468 Sphingomonas naphthae 0.01 14 0 F 335929 Erythrobacteraceae 0.01 10 9 G 2800681 Aurantiacibacter 0.00 1 0 G1 2800693 unclassified Aurantiacibacter 0.00 1 1 S 3003265 Aurantiacibacter sp. MUD11 0.00 2 0 G 2676755 Croceibacterium 0.00 2 0 G1 2676756 unclassified Croceibacterium 0.00 2 2 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 2 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 2 0 G 1111 Porphyrobacter 0.00 2 0 G1 2683265 unclassified Porphyrobacter 0.00 2 2 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.01 13 0 O 766 Rickettsiales 0.01 8 0 F 775 Rickettsiaceae 0.01 8 0 F1 33988 Rickettsieae 0.01 6 0 G 780 Rickettsia 0.01 6 0 G1 114277 spotted fever group 0.01 6 0 S 781 Rickettsia conorii 0.01 6 6 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 5 0 F 942 Anaplasmataceae 0.00 4 4 G 768 Anaplasma 0.00 1 0 G 943 Ehrlichia 0.00 1 0 G1 106178 canis group 0.00 1 1 S 944 Ehrlichia canis 0.01 10 0 O 2800060 Hyphomonadales 0.01 10 0 F 69657 Hyphomonadaceae 0.01 9 9 G 85 Hyphomonas 0.00 1 0 G 2723 Hirschia 0.00 1 0 S 2724 Hirschia baltica 0.00 1 1 S1 582402 Hirschia baltica ATCC 49814 0.01 6 0 O 2066490 Emcibacterales 0.01 6 0 F 2066491 Emcibacteraceae 0.01 6 0 G 2943291 Pseudemcibacter 0.01 6 6 S 2857064 Pseudemcibacter aquimaris 0.00 3 0 O 1921002 Holosporales 0.00 3 0 F 44746 Holosporaceae 0.00 1 0 G 2601574 Candidatus Cytomitobacter 0.00 1 1 S 2601575 Candidatus Cytomitobacter indipagum 0.00 1 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 1 1 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 G 2900571 Candidatus Gromoviella 0.00 1 1 S 2806609 Candidatus Gromoviella agglomerans 0.00 2 0 C1 33807 unclassified Alphaproteobacteria 0.00 2 2 S 3077944 Alphaproteobacteria bacterium endosymbiont of Tiliacea citrago 0.01 13 0 C 1807140 Acidithiobacillia 0.01 13 0 O 225057 Acidithiobacillales 0.01 13 0 F 225058 Acidithiobacillaceae 0.01 13 12 G 119977 Acidithiobacillus 0.00 1 0 G1 2614800 unclassified Acidithiobacillus 0.00 1 1 S 2994951 Acidithiobacillus sp. AMEEHan 0.00 2 0 C 580370 Zetaproteobacteria 0.00 2 0 O 580371 Mariprofundales 0.00 2 0 F 580372 Mariprofundaceae 0.00 2 2 G 377315 Mariprofundus 20.57 22094 471 D1 1783272 Terrabacteria group 14.48 15553 128 P 1239 Bacillota 11.88 12754 114 C 91061 Bacilli 9.27 9957 42 O 186826 Lactobacillales 5.56 5971 5 F 1300 Streptococcaceae 5.51 5923 4261 G 1301 Streptococcus 0.47 503 384 S 1308 Streptococcus thermophilus 0.10 111 111 S1 767463 Streptococcus thermophilus ND03 0.01 8 8 S1 322159 Streptococcus thermophilus LMD-9 0.17 184 184 S 68892 Streptococcus infantis 0.15 160 147 S 1311 Streptococcus agalactiae 0.01 13 13 S1 1203670 Streptococcus agalactiae GD201008-001 0.14 153 147 S 1314 Streptococcus pyogenes 0.01 6 0 S1 301449 Streptococcus pyogenes serotype M5 0.01 6 6 S2 160491 Streptococcus pyogenes str. Manfredo 0.13 144 100 S 1313 Streptococcus pneumoniae 0.03 37 37 S1 1159083 Streptococcus pneumoniae PCS8235 0.01 7 7 S1 869311 Streptococcus pneumoniae SPN032672 0.09 101 101 S 2490633 Streptococcus periodonticum 0.05 55 55 S 1304 Streptococcus salivarius 0.05 53 11 G1 2608887 unclassified Streptococcus 0.02 19 19 S 3098075 Streptococcus sp. S1 0.01 10 10 S 3028082 Streptococcus sp. 29896 0.01 9 9 S 2664091 Streptococcus sp. zg-86 0.00 3 3 S 2975324 Streptococcus sp. FSL R7-0248 0.00 1 1 S 3231906 Streptococcus sp. ZY19097 0.04 45 45 S 1345 Streptococcus ferus 0.03 36 36 S 1341 Streptococcus ratti 0.03 34 34 S 1111760 Streptococcus troglodytae 0.03 28 0 G1 671232 Streptococcus anginosus group 0.02 20 20 S 1328 Streptococcus anginosus 0.01 8 6 S 1338 Streptococcus intermedius 0.00 1 1 S1 862966 Streptococcus intermedius C270 0.00 1 1 S1 862967 Streptococcus intermedius B196 0.02 17 17 S 1326 Streptococcus acidominimus 0.01 15 15 S 1348 Streptococcus parauberis 0.01 14 14 S 1811193 Streptococcus pantholopis 0.01 13 13 S 28037 Streptococcus mitis 0.01 12 12 S 1310 Streptococcus sobrinus 0.01 12 9 S 1307 Streptococcus suis 0.00 3 3 S1 1340847 Streptococcus suis T15 0.01 11 0 G1 119603 Streptococcus dysgalactiae group 0.01 7 7 S 1336 Streptococcus equi 0.00 4 0 S 1334 Streptococcus dysgalactiae 0.00 4 2 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 2 2 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.01 11 11 S 82348 Streptococcus pluranimalium 0.01 10 10 S 2021971 Streptococcus respiraculi 0.01 7 7 S 102886 Streptococcus didelphis 0.01 7 7 S 1305 Streptococcus sanguinis 0.01 6 6 S 1346 Streptococcus iniae 0.00 5 5 S 1335 Streptococcus equinus 0.00 5 5 S 59310 Streptococcus macedonicus 0.00 4 0 S 1303 Streptococcus oralis 0.00 4 4 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 4 4 S 33040 Streptococcus milleri 0.00 3 3 S 2173853 Streptococcus chenjunshii 0.00 2 2 S 1501662 Streptococcus parasuis 0.00 2 2 S 149016 Streptococcus urinalis 0.00 2 2 S 400065 Streptococcus merionis 0.00 1 1 S 2781599 Streptococcus oriscaviae 0.00 1 1 S 2686210 Streptococcus ruminicola 0.00 1 1 S 1302 Streptococcus gordonii 0.00 1 1 S 1309 Streptococcus mutans 0.04 43 5 G 1357 Lactococcus 0.03 35 35 S 1366 Lactococcus raffinolactis 0.00 2 2 S 1359 Lactococcus cremoris 0.00 1 1 S 1358 Lactococcus lactis 3.08 3313 0 F 81852 Enterococcaceae 3.08 3311 17 G 1350 Enterococcus 3.04 3268 3265 S 1351 Enterococcus faecalis 0.00 3 3 S1 1201292 Enterococcus faecalis ATCC 29212 0.02 17 17 S 1352 Enterococcus faecium 0.00 5 5 S 1354 Enterococcus hirae 0.00 2 2 S 1353 Enterococcus gallinarum 0.00 2 2 S 44008 Enterococcus cecorum 0.00 2 0 G 51668 Tetragenococcus 0.00 1 1 S 51669 Tetragenococcus halophilus 0.00 1 1 S 526944 Tetragenococcus osmophilus 0.31 330 0 F 186828 Carnobacteriaceae 0.30 322 0 G 117563 Granulicatella 0.23 248 248 S 46124 Granulicatella adiacens 0.07 74 74 S 137732 Granulicatella elegans 0.00 5 5 G 29393 Dolosigranulum 0.00 3 2 G 2747 Carnobacterium 0.00 1 0 S 2751 Carnobacterium maltaromaticum 0.00 1 1 S1 1234679 Carnobacterium maltaromaticum LMA28 0.26 283 16 F 33958 Lactobacillaceae 0.16 171 30 G 1578 Lactobacillus 0.10 109 105 S 1584 Lactobacillus delbrueckii 0.00 3 2 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 1 1 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 1 0 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 1 S2 888027 Lactobacillus delbrueckii subsp. lactis DSM 20072 0.02 26 2 G1 2620435 unclassified Lactobacillus 0.02 24 24 S 1545702 Lactobacillus sp. wkB8 0.00 2 2 S 1579 Lactobacillus acidophilus 0.00 1 0 S 1587 Lactobacillus helveticus 0.00 1 1 S1 880633 Lactobacillus helveticus R0052 0.00 1 1 S 33959 Lactobacillus johnsonii 0.00 1 1 S 83683 Lactobacillus amylolyticus 0.00 1 1 S 109790 Lactobacillus jensenii 0.03 29 23 G 46255 Weissella 0.00 5 5 S 137591 Weissella cibaria 0.00 1 1 S 1583 Weissella confusa 0.02 20 4 G 2767887 Ligilactobacillus 0.01 6 0 S 1622 Ligilactobacillus murinus 0.01 6 6 S1 1235801 Ligilactobacillus murinus ASF361 0.01 6 6 S 89059 Ligilactobacillus acidipiscis 0.00 3 3 S 1624 Ligilactobacillus salivarius 0.00 1 1 S 1605 Ligilactobacillus animalis 0.01 11 1 G 2759736 Lacticaseibacillus 0.01 8 8 S 1597 Lacticaseibacillus paracasei 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.00 1 1 S 3025672 Lacticaseibacillus pabuli 0.01 11 0 G 2767842 Lactiplantibacillus 0.01 10 10 S 1590 Lactiplantibacillus plantarum 0.00 1 1 S 1589 Lactiplantibacillus pentosus 0.00 4 0 G 2930384 Periweissella 0.00 4 4 S 2506420 Periweissella cryptocerci 0.00 3 0 G 2767886 Levilactobacillus 0.00 3 3 S 1580 Levilactobacillus brevis 0.00 3 3 G 2767893 Lentilactobacillus 0.00 3 1 G 2767877 Apilactobacillus 0.00 1 1 S 148814 Apilactobacillus kunkeei 0.00 1 1 S 2419772 Apilactobacillus bombintestini 0.00 2 2 G 2767889 Loigolactobacillus 0.00 2 2 G 1243 Leuconostoc 0.00 2 0 G 2742598 Limosilactobacillus 0.00 2 2 S 1598 Limosilactobacillus reuteri 0.00 2 2 G 46254 Oenococcus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.00 1 0 G 2767891 Schleiferilactobacillus 0.00 1 1 S 304207 Schleiferilactobacillus harbinensis 0.00 1 0 G 2767885 Latilactobacillus 0.00 1 1 S 1599 Latilactobacillus sakei 0.00 1 1 G 2767888 Liquorilactobacillus 0.02 18 0 F 186827 Aerococcaceae 0.01 7 6 G 1375 Aerococcus 0.00 1 1 S 87541 Aerococcus christensenii 0.00 5 0 G 66831 Facklamia 0.00 5 5 S 178214 Facklamia hominis 0.00 5 0 G 89092 Ignavigranum 0.00 5 5 S 89093 Ignavigranum ruoffiae 0.00 1 0 G 46123 Abiotrophia 0.00 1 1 S 46125 Abiotrophia defectiva 2.50 2683 100 O 1385 Bacillales 1.32 1418 39 F 186817 Bacillaceae 1.09 1167 235 G 1386 Bacillus 0.49 521 31 G1 86661 Bacillus cereus group 0.19 200 177 S 1428 Bacillus thuringiensis 0.01 9 9 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 6 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.01 6 6 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.00 3 3 S1 180850 Bacillus thuringiensis serovar indiana 0.00 2 0 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 2 2 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 2 2 S1 1423143 Bacillus thuringiensis Bt18247 0.00 1 1 S1 529122 Bacillus thuringiensis YBT-1518 0.12 127 53 S 1396 Bacillus cereus 0.03 36 36 S1 1454382 Bacillus cereus D17 0.03 32 32 S1 1003239 Bacillus cereus C1L 0.00 3 3 S1 572264 Bacillus cereus 03BB102 0.00 2 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 2 2 S2 637380 Bacillus cereus biovar anthracis str. CI 0.00 1 1 S1 405532 Bacillus cereus B4264 0.09 97 97 S 1392 Bacillus anthracis 0.02 24 0 G2 2750818 unclassified Bacillus cereus group 0.02 24 24 S 1892404 Bacillus sp. ABP14 0.01 16 16 S 1405 Bacillus mycoides 0.01 11 11 S 2026191 Bacillus luti 0.01 7 7 S 64104 Bacillus pseudomycoides 0.00 5 5 S 2026186 Bacillus paranthracis 0.00 2 2 S 2817477 Bacillus paramobilis 0.00 1 1 S 155322 Bacillus toyonensis 0.33 355 3 G1 653685 Bacillus subtilis group 0.31 330 1 G2 1938374 Bacillus amyloliquefaciens group 0.27 285 283 S 492670 Bacillus velezensis 0.00 2 2 S1 1385727 Bacillus velezensis NAU-B3 0.04 42 42 S 1390 Bacillus amyloliquefaciens 0.00 2 2 S 659243 Bacillus siamensis 0.02 20 11 S 1423 Bacillus subtilis 0.01 6 6 S1 86029 Bacillus subtilis subsp. natto 0.00 3 3 S1 135461 Bacillus subtilis subsp. subtilis 0.00 1 1 S 1402 Bacillus licheniformis 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.04 43 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.01 12 12 S 2874284 Bacillus sp. CRB-7 0.01 10 10 S 352858 Bacillus sp. Y1 0.01 8 8 S 2841656 Bacillus sp. ZHX3 0.00 5 5 S 2925318 Bacillus sp. N5-665 0.00 4 4 S 1806216 Bacillus sp. RZ2MS9 0.00 2 2 S 3229854 Bacillus sp. Bos-x628 0.00 1 1 S 2789208 Bacillus sp. N447-1 0.00 1 1 S 3129297 Bacillus sp. FJAT-52991 0.01 10 0 G1 1792192 Bacillus altitudinis complex 0.01 10 10 S 293387 Bacillus altitudinis 0.00 2 2 S 1408 Bacillus pumilus 0.00 1 1 S 561879 Bacillus safensis 0.08 89 0 G 84406 Virgibacillus 0.08 87 87 S 447199 Virgibacillus salarius 0.00 2 0 G1 2620237 unclassified Virgibacillus 0.00 1 1 S 403957 Virgibacillus sp. SK37 0.00 1 1 S 2419841 Virgibacillus sp. Bac330 0.03 33 0 G 2800373 Priestia 0.03 32 29 S 1404 Priestia megaterium 0.00 3 3 S1 1006007 Priestia megaterium WSH-002 0.00 1 1 S 412384 Priestia aryabhattai 0.02 20 5 G 400634 Lysinibacillus 0.01 7 0 G1 2636778 unclassified Lysinibacillus 0.01 7 7 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 5 5 S 2590012 Lysinibacillus agricola 0.00 2 2 S 2086577 Lysinibacillus timonensis 0.00 1 1 S 28031 Lysinibacillus fusiformis 0.01 12 0 G 2837506 Niallia 0.01 12 0 G1 2837522 unclassified Niallia 0.01 12 12 S 3082444 Niallia sp. XMNu-256 0.01 8 0 G 2675229 Peribacillus 0.00 5 5 S 264697 Peribacillus muralis 0.00 2 2 S 1407 Peribacillus psychrosaccharolyticus 0.00 1 1 S 228899 Peribacillus asahii 0.01 7 0 G 45667 Halobacillus 0.00 4 4 S 2932257 Halobacillus salinarum 0.00 3 3 S 45668 Halobacillus litoralis 0.00 5 0 G 129337 Geobacillus 0.00 3 3 S 1921421 Geobacillus genomosp. 3 0.00 2 0 S 33940 Geobacillus thermodenitrificans 0.00 2 2 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 5 0 G 2675232 Neobacillus 0.00 3 3 S 1193713 Neobacillus mesonae 0.00 1 1 S 220684 Neobacillus drentensis 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070676 Neobacillus sp. PS2-9 0.00 5 0 G 2837504 Heyndrickxia 0.00 5 5 S 1398 Heyndrickxia coagulans 0.00 4 0 G 2785518 Radiobacillus 0.00 4 4 S 2594883 Radiobacillus deserti 0.00 4 0 G 175304 Lentibacillus 0.00 2 2 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.00 1 1 S 2911514 Lentibacillus daqui 0.00 4 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 4 0 S 86665 Halalkalibacterium halodurans 0.00 4 4 S1 272558 Halalkalibacterium halodurans C-125 0.00 3 1 G 2675233 Metabacillus 0.00 2 0 G1 2675274 unclassified Metabacillus 0.00 2 2 S 2897333 Metabacillus sp. B2-18 0.00 2 0 G 2005375 Alkalicoccus 0.00 2 2 S 1667239 Alkalicoccus halolimnae 0.00 2 1 G 2685905 Salicibibacter 0.00 1 1 S 2743001 Salicibibacter cibi 0.00 2 0 G 1433999 Domibacillus 0.00 2 0 G1 2632383 unclassified Domibacillus 0.00 2 2 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 1 0 G 1400133 Allobacillus 0.00 1 1 S 570278 Allobacillus halotolerans 0.00 1 0 G 2837485 Evansella 0.00 1 0 S 1413 Evansella cellulosilytica 0.00 1 1 S1 649639 Evansella cellulosilytica DSM 2522 0.00 1 0 G 1906945 Parageobacillus 0.00 1 1 S 1426 Parageobacillus thermoglucosidasius 0.00 1 0 G 2675230 Cytobacillus 0.00 1 1 S 1399 Cytobacillus firmus 0.00 1 0 G 2675231 Mesobacillus 0.00 1 1 S 285983 Mesobacillus subterraneus 0.00 1 0 G 2804231 Lederbergia 0.00 1 1 S 1467 Lederbergia lenta 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 G1 2639704 unclassified Anoxybacillus 0.67 716 1 F 90964 Staphylococcaceae 0.66 714 56 G 1279 Staphylococcus 0.44 469 450 S 1280 Staphylococcus aureus 0.02 18 18 S1 1229492 Staphylococcus aureus 08BA02176 0.00 1 1 S1 548473 Staphylococcus aureus subsp. aureus TCH60 0.05 54 53 S 1282 Staphylococcus epidermidis 0.00 1 1 S1 176280 Staphylococcus epidermidis ATCC 12228 0.04 42 42 S 28035 Staphylococcus lugdunensis 0.02 26 26 S 70255 Staphylococcus condimenti 0.02 24 23 S 29388 Staphylococcus capitis 0.00 1 1 S1 74703 Staphylococcus capitis subsp. urealyticus 0.01 16 16 S 1283 Staphylococcus haemolyticus 0.00 5 5 S 1286 Staphylococcus simulans 0.00 5 5 S 2044912 Staphylococcus debuckii 0.00 5 5 S 29378 Staphylococcus arlettae 0.00 3 3 S 1290 Staphylococcus hominis 0.00 2 0 G1 2815305 Staphylococcus intermedius group 0.00 2 2 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 29385 Staphylococcus saprophyticus 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.00 1 1 S 985002 Staphylococcus argenteus 0.00 1 1 S 45972 Staphylococcus pasteuri 0.00 1 1 S 201828 Staphylococcus casei 0.00 1 1 S 170573 Staphylococcus pettenkoferi 0.00 1 1 S 29382 Staphylococcus cohnii 0.00 1 0 G 2803850 Mammaliicoccus 0.00 1 1 S 1296 Mammaliicoccus sciuri 0.28 304 0 F 539738 Gemellaceae 0.28 304 207 G 1378 Gemella 0.08 83 83 S 29391 Gemella morbillorum 0.01 14 14 G1 2624949 unclassified Gemella 0.06 61 0 F 186822 Paenibacillaceae 0.05 53 6 G 44249 Paenibacillus 0.02 20 0 G1 185978 unclassified Paenibacillus 0.01 10 10 S 715179 Paenibacillus sp. sptzw28 0.01 6 6 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 3 3 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 2211212 Paenibacillus sp. DCT19 0.01 15 15 S 79263 Paenibacillus chitinolyticus 0.01 6 5 S 1406 Paenibacillus polymyxa 0.00 1 1 S1 886882 Paenibacillus polymyxa SC2 0.00 2 2 S 130049 Paenibacillus dendritiformis 0.00 1 1 S 44250 Paenibacillus alvei 0.00 1 1 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 2509456 Paenibacillus protaetiae 0.00 1 1 S 1464 Paenibacillus larvae 0.01 7 0 F1 85151 Aneurinibacillus group 0.01 7 6 G 55079 Aneurinibacillus 0.00 1 1 S 1500254 Aneurinibacillus soli 0.00 1 0 G 55080 Brevibacillus 0.00 1 1 S 45462 Brevibacillus borstelensis 0.04 40 20 F 186818 Planococcaceae 0.01 7 7 G 1372 Planococcus 0.01 6 0 G 651660 Paenisporosarcina 0.01 6 6 S 2320858 Paenisporosarcina cavernae 0.00 4 0 G 160795 Ureibacillus 0.00 3 3 S 367743 Ureibacillus thermophilus 0.00 1 1 S 51173 Ureibacillus thermosphaericus 0.00 1 1 G 1569 Sporosarcina 0.00 1 0 G 1649 Kurthia 0.00 1 1 S 1650 Kurthia zopfii 0.00 1 0 G 889388 Chryseomicrobium 0.00 1 0 G1 2625558 unclassified Chryseomicrobium 0.00 1 1 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.02 19 0 F 186820 Listeriaceae 0.02 18 2 G 1637 Listeria 0.01 8 0 G1 2642072 unclassified Listeria 0.01 8 8 S 1844999 Listeria sp. PSOL-1 0.00 5 0 S 1638 Listeria ivanovii 0.00 5 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.00 5 5 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 2 2 S 1639 Listeria monocytogenes 0.00 1 1 S 1006155 Listeria weihenstephanensis 0.00 1 0 G 2755 Brochothrix 0.00 1 1 S 2756 Brochothrix thermosphacta 0.01 13 6 F 186824 Thermoactinomycetaceae 0.00 4 0 G 1677050 Novibacillus 0.00 4 4 S 1471761 Novibacillus thermophilus 0.00 1 0 G 2023 Thermoactinomyces 0.00 1 1 S 2026 Thermoactinomyces vulgaris 0.00 1 0 G 292635 Laceyella 0.00 1 1 S 37482 Laceyella sacchari 0.00 1 0 G 1348505 Polycladomyces 0.00 1 1 S 1125966 Polycladomyces abyssicola 0.01 8 1 F 186823 Alicyclobacillaceae 0.01 6 1 G 29330 Alicyclobacillus 0.00 5 5 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 G 1129704 Kyrpidia 0.00 3 0 F 186821 Sporolactobacillaceae 0.00 2 0 G 2077 Sporolactobacillus 0.00 2 2 S 269673 Sporolactobacillus terrae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 1 1 G 33986 Exiguobacterium 1.75 1876 0 C 909932 Negativicutes 1.07 1147 0 O 1843489 Veillonellales 1.07 1147 2 F 31977 Veillonellaceae 1.02 1096 363 G 29465 Veillonella 0.45 485 485 S 29466 Veillonella parvula 0.19 202 202 S 423477 Veillonella rogosae 0.04 40 40 S 39777 Veillonella atypica 0.01 6 6 S 248315 Veillonella rodentium 0.03 34 27 G 906 Megasphaera 0.00 4 4 S 2144175 Megasphaera stantonii 0.00 2 1 S 907 Megasphaera elsdenii 0.00 1 1 S1 1064535 Megasphaera elsdenii DSM 20460 0.00 1 1 S 1675036 Megasphaera hexanoica 0.01 15 1 G 39948 Dialister 0.01 13 13 S 487173 Dialister succinatiphilus 0.00 1 1 S 39950 Dialister pneumosintes 0.68 727 1 O 909929 Selenomonadales 0.67 724 1 F 1843491 Selenomonadaceae 0.67 721 336 G 970 Selenomonas 0.26 284 42 G1 2637378 unclassified Selenomonas 0.15 159 159 S 713030 Selenomonas sp. oral taxon 136 0.07 73 73 S 1884263 Selenomonas sp. oral taxon 920 0.01 7 7 S 712538 Selenomonas sp. oral taxon 478 0.00 2 2 S 712528 Selenomonas sp. oral taxon 126 0.00 1 1 S 3095337 Selenomonas sp. TAMA-11512 0.09 99 99 S 69823 Selenomonas sputigena 0.00 2 2 S 135079 Selenomonas dianae 0.00 2 2 G 158846 Megamonas 0.00 2 1 F 1843490 Sporomusaceae 0.00 1 0 G 81463 Anaeromusa 0.00 1 0 G1 673272 environmental samples 0.00 1 1 S 673273 uncultured Anaeromusa sp. 0.00 2 0 O 1843488 Acidaminococcales 0.00 2 0 F 909930 Acidaminococcaceae 0.00 2 1 G 904 Acidaminococcus 0.00 1 0 S 905 Acidaminococcus fermentans 0.00 1 1 S1 591001 Acidaminococcus fermentans DSM 20731 0.55 595 13 C 186801 Clostridia 0.20 217 0 O 53433 Halanaerobiales 0.20 217 0 F 53434 Halobacteroidaceae 0.20 216 0 G 42417 Halobacteroides 0.20 216 0 S 42422 Halobacteroides halobius 0.20 216 216 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.19 199 0 O 3085636 Lachnospirales 0.16 171 7 F 186803 Lachnospiraceae 0.07 70 30 G 1164882 Lachnoanaerobaculum 0.04 38 38 S 2490855 Lachnoanaerobaculum gingivalis 0.00 2 2 S 617123 Lachnoanaerobaculum umeaense 0.02 22 0 G 1213720 Stomatobaculum 0.02 22 0 G1 2643635 unclassified Stomatobaculum 0.02 22 22 S 3059030 Stomatobaculum sp. F0698 0.02 20 0 G 1506553 Lachnoclostridium 0.02 18 0 S 66219 Lachnoclostridium phytofermentans 0.02 18 18 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 1 1 S 1512 [Clostridium] symbiosum 0.00 1 1 S 29347 [Clostridium] scindens 0.01 13 1 G 33042 Coprococcus 0.01 12 0 G1 2684943 unclassified Coprococcus 0.01 12 12 S 751585 Coprococcus sp. ART55/1 0.01 12 1 G 207244 Anaerostipes 0.01 9 9 S 649756 Anaerostipes hadrus 0.00 2 2 S 1229621 Anaerostipes rhamnosivorans 0.01 11 0 G 830 Butyrivibrio 0.01 11 0 S 43305 Butyrivibrio proteoclasticus 0.01 11 11 S1 515622 Butyrivibrio proteoclasticus B316 0.01 9 0 G 2569097 Anaerobutyricum 0.01 9 9 S 39488 Anaerobutyricum hallii 0.00 5 0 G 2383 Candidatus Epulonipiscium 0.00 5 5 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 G 572511 Blautia 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 0 G 841 Roseburia 0.00 1 1 S 301301 Roseburia hominis 0.03 28 0 F 2603322 Vallitaleaceae 0.03 28 0 G 2603323 Petrocella 0.03 28 28 S 2173034 Petrocella atlantisensis 0.14 152 21 O 186802 Eubacteriales 0.05 49 2 F 216572 Oscillospiraceae 0.03 28 0 G 216851 Faecalibacterium 0.03 28 28 S 853 Faecalibacterium prausnitzii 0.01 10 0 G 2842531 Solibaculum 0.01 10 10 S 2780922 Solibaculum mannosilyticum 0.01 9 0 G 1263 Ruminococcus 0.00 4 4 S 2564099 Ruminococcus bovis 0.00 3 3 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.00 2 2 G1 2608920 unclassified Ruminococcus 0.04 45 44 F 31984 Heliobacteriaceae 0.00 1 0 G 79598 Heliorestis 0.00 1 1 S 356322 Heliorestis convoluta 0.01 14 1 F 31979 Clostridiaceae 0.01 13 2 G 1485 Clostridium 0.00 5 5 S 1502 Clostridium perfringens 0.00 2 0 S 1491 Clostridium botulinum 0.00 2 2 S1 1408283 Clostridium botulinum CDC_1436 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 2930219 Clostridium sp. BJN0001 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 1 S 84023 Clostridium autoethanogenum 0.00 1 1 S 36839 Clostridium felsineum 0.01 6 0 F 186807 Peptococcaceae 0.00 5 0 G 2924872 Acididesulfobacillus 0.00 5 5 S 1561005 Acididesulfobacillus acetoxydans 0.00 1 0 G 2282742 Desulfofarcimen 0.00 1 0 S 58138 Desulfofarcimen acetoxidans 0.00 1 1 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.00 5 0 F 186806 Eubacteriaceae 0.00 3 0 G 1730 Eubacterium 0.00 3 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 3 3 S 2841528 Eubacterium sp. MSJ-33 0.00 2 2 G 33951 Acetobacterium 0.00 5 0 O1 538999 Eubacteriales incertae sedis 0.00 3 1 G 1686313 Fenollaria 0.00 2 2 S 938288 Fenollaria massiliensis 0.00 1 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 1 1 G 73918 Thermaerobacter 0.00 1 0 G 1392389 Intestinimonas 0.00 1 1 S 1297617 Intestinimonas butyriciproducens 0.00 3 0 F 1491775 Proteinivoraceae 0.00 3 0 G 2838170 Alkalicella 0.00 3 3 S 2731377 Alkalicella caledoniensis 0.00 1 0 F 2867375 Desulfallaceae 0.00 1 1 G 2867376 Desulfoscipio 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 1 G 56112 Dehalobacter 0.00 1 0 F 2937910 Desulfotomaculaceae 0.00 1 0 G 1562 Desulfotomaculum 0.00 1 0 S 1565 Desulfotomaculum nigrificans 0.00 1 1 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 1 G 3046369 Aristaeella 0.01 9 0 O 3082720 Peptostreptococcales 0.01 8 2 F 186804 Peptostreptococcaceae 0.00 3 0 G 1505657 Intestinibacter 0.00 3 3 S 261299 Intestinibacter bartlettii 0.00 2 0 G 1849822 Paraclostridium 0.00 2 2 S 1505 Paraclostridium sordellii 0.00 1 0 G 1257 Peptostreptococcus 0.00 1 1 S 3003601 Peptostreptococcus equinus 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.00 4 0 O 68295 Thermoanaerobacterales 0.00 4 0 F 186814 Thermoanaerobacteraceae 0.00 4 0 G 3051499 Aceticella 0.00 4 4 S 2755338 Aceticella autotrophica 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 3039168 Moorellaceae 0.00 1 0 G 202949 Thermanaeromonas 0.00 1 0 S 161154 Thermanaeromonas toyohensis 0.00 1 1 S1 698762 Thermanaeromonas toyohensis ToBE 0.18 194 0 C 1737404 Tissierellia 0.17 182 1 O 1737405 Tissierellales 0.17 179 0 F 1570339 Peptoniphilaceae 0.14 155 4 G 165779 Anaerococcus 0.07 78 0 S 33034 Anaerococcus prevotii 0.07 78 78 S1 525919 Anaerococcus prevotii DSM 20548 0.03 31 0 G1 2614126 unclassified Anaerococcus 0.03 31 31 S 3036300 Anaerococcus sp. Marseille-Q7828 0.03 29 29 S 1870984 Anaerococcus mediterraneensis 0.01 13 13 S 1755241 Anaerococcus nagyae 0.01 12 0 G 162289 Peptoniphilus 0.01 11 11 S 54005 Peptoniphilus harei 0.00 1 1 S 3036303 Peptoniphilus genitalis 0.01 10 0 G 150022 Finegoldia 0.01 10 10 S 1260 Finegoldia magna 0.00 2 0 G 1161127 Murdochiella 0.00 2 2 S 1852373 Murdochiella vaginalis 0.00 1 0 F 2992717 Acidilutibacteraceae 0.00 1 0 G 2992720 Acidilutibacter 0.00 1 1 S 2507161 Acidilutibacter cellobiosedens 0.00 1 0 F 2992719 Tepidimicrobiaceae 0.00 1 0 G 1354809 Keratinibaculum 0.00 1 1 S 1278232 Keratinibaculum paraultunense 0.01 12 0 C1 1737407 Tissierellia incertae sedis 0.01 12 0 G 1582879 Ezakiella 0.01 12 12 S 46507 Ezakiella coagulans 0.01 6 0 C 526524 Erysipelotrichia 0.01 6 0 O 526525 Erysipelotrichales 0.00 4 1 F 128827 Erysipelotrichaceae 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1648 Erysipelothrix rhusiopathiae 0.00 1 0 G 1729679 Faecalibaculum 0.00 1 1 S 1702221 Faecalibaculum rodentium 0.00 1 0 G 1918536 Longicatena 0.00 1 1 S 1796635 Longicatena caecimuris 0.00 1 0 F 2810280 Coprobacillaceae 0.00 1 1 G 3025755 Thomasclavelia 0.00 1 0 F 2810281 Turicibacteraceae 0.00 1 1 G 191303 Turicibacter 4.72 5073 3 P 201174 Actinomycetota 4.67 5020 37 C 1760 Actinomycetes 1.59 1711 10 O 85009 Propionibacteriales 1.57 1688 56 F 31957 Propionibacteriaceae 1.42 1521 26 G 1912216 Cutibacterium 1.35 1455 1453 S 1747 Cutibacterium acnes 0.00 2 0 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 2 2 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.03 36 36 S 33011 Cutibacterium granulosum 0.00 2 2 S 33010 Cutibacterium avidum 0.00 2 2 S 2559073 Cutibacterium modestum 0.08 88 3 G 2801844 Arachnia 0.07 72 72 S 1547448 Arachnia rubra 0.01 13 13 S 1750 Arachnia propionica 0.01 12 2 G 29404 Microlunatus 0.01 7 0 G1 2619695 unclassified Microlunatus 0.01 7 7 S 2672569 Microlunatus sp. Gsoil 973 0.00 2 2 S 630515 Microlunatus soli 0.00 1 0 S 29405 Microlunatus phosphovorus 0.00 1 1 S1 1032480 Microlunatus phosphovorus NM-1 0.01 6 0 G 1912215 Acidipropionibacterium 0.01 6 6 S 1749 Acidipropionibacterium jensenii 0.00 3 0 G 72763 Tessaracoccus 0.00 3 3 S 1285901 Tessaracoccus defluvii 0.00 1 0 G 369926 Brooklawnia 0.00 1 1 S 3041175 Brooklawnia propionicigenes 0.00 1 0 G 1085622 Propioniciclava 0.00 1 1 S 2775081 Propioniciclava soli 0.01 12 0 F 85015 Nocardioidaceae 0.01 11 0 G 1839 Nocardioides 0.01 7 7 S 2518370 Nocardioides euryhalodurans 0.00 4 0 G1 2615069 unclassified Nocardioides 0.00 3 3 S 2976000 Nocardioides sp. NBC_00368 0.00 1 1 S 2763008 Nocardioides sp. zg-1228 0.00 1 0 G 3024237 Solicola 0.00 1 1 S 2908642 Solicola gregarius 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 3002436 Kribbella sp. CA-293567 1.47 1578 15 O 85006 Micrococcales 1.39 1498 3 F 1268 Micrococcaceae 1.35 1454 137 G 32207 Rothia 0.83 895 895 S 2047 Rothia dentocariosa 0.23 249 249 S 172042 Rothia aeria 0.15 161 158 S 43675 Rothia mucilaginosa 0.00 3 3 S1 680646 Rothia mucilaginosa DY-18 0.01 12 12 S 169480 Rothia amarae 0.02 25 18 G 57493 Kocuria 0.00 5 5 S 71999 Kocuria palustris 0.00 1 1 S 72000 Kocuria rhizophila 0.00 1 0 G1 2649579 unclassified Kocuria 0.00 1 1 S 2711328 Kocuria sp. TGY1127_2 0.01 6 0 G 1742989 Glutamicibacter 0.00 5 5 S 37929 Glutamicibacter nicotianae 0.00 1 1 S 1933880 Glutamicibacter halophytocola 0.00 5 5 G 1269 Micrococcus 0.00 2 0 G 1742993 Pseudarthrobacter 0.00 2 0 G1 2647000 unclassified Pseudarthrobacter 0.00 2 2 S 2973976 Pseudarthrobacter sp. NS4 0.00 2 2 G 1160973 Auritidibacter 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2017685 Arthrobacter sp. PM3 0.03 32 12 F 85023 Microbacteriaceae 0.00 4 0 G 1195526 Gryllotalpicola 0.00 4 4 S 2419771 Gryllotalpicola protaetiae 0.00 4 0 G 33882 Microbacterium 0.00 3 3 S 2509458 Microbacterium protaetiae 0.00 1 1 S 273677 Microbacterium oleivorans 0.00 3 2 G 33877 Agromyces 0.00 1 1 S 2592652 Agromyces intestinalis 0.00 3 3 G 55968 Leucobacter 0.00 2 0 F1 1655488 Luna cluster 0.00 2 1 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 1 S 2499157 Aquiluna borgnonia 0.00 2 0 G 255204 Pseudoclavibacter 0.00 2 0 G1 2615177 unclassified Pseudoclavibacter 0.00 2 2 S 2866588 Pseudoclavibacter sp. Marseille-Q3772 0.00 1 1 G 33886 Rathayibacter 0.00 1 0 G 1573 Clavibacter 0.00 1 1 S 31963 Clavibacter nebraskensis 0.02 17 0 F 2805591 Tropherymataceae 0.02 17 0 G 2038 Tropheryma 0.02 17 17 S 2039 Tropheryma whipplei 0.01 9 0 F 85019 Brevibacteriaceae 0.01 9 1 G 1696 Brevibacterium 0.01 8 0 G1 2614124 unclassified Brevibacterium 0.00 5 5 S 2999062 Brevibacterium sp. BRM-1 0.00 3 3 S 2575923 Brevibacterium sp. CS2 0.00 2 0 F 85020 Dermabacteraceae 0.00 2 2 G 43668 Brachybacterium 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 0 G 1707 Cellulomonas 0.00 1 0 G1 2620175 unclassified Cellulomonas 0.00 1 1 S 2591145 Cellulomonas sp. Y8 0.00 1 0 F 2805590 Ornithinimicrobiaceae 0.00 1 0 G 265976 Serinicoccus 0.00 1 0 S 247333 Serinicoccus marinus 0.00 1 1 S1 1123251 Serinicoccus marinus DSM 15273 0.00 1 0 F 145357 Dermacoccaceae 0.00 1 0 G 908935 Yimella 0.00 1 0 G1 2649892 unclassified Yimella 0.00 1 1 S 2770551 Yimella sp. cx-51 0.00 1 0 F 85022 Jonesiaceae 0.00 1 0 G 43673 Jonesia 0.00 1 1 S 43674 Jonesia denitrificans 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1184606 Austwickia 0.00 1 1 S 100225 Austwickia chelonae 0.73 785 0 O 2037 Actinomycetales 0.73 785 13 F 2049 Actinomycetaceae 0.62 668 401 G 1654 Actinomyces 0.10 105 105 S 1288391 Actinomyces timonensis 0.07 73 35 G1 2609248 unclassified Actinomyces 0.03 28 28 S 1851395 Actinomyces sp. Chiba101 0.00 5 5 S 712122 Actinomyces sp. oral taxon 414 0.00 4 0 S 706438 Actinomyces sp. oral taxon 171 0.00 4 4 S1 706439 Actinomyces sp. oral taxon 171 str. F0337 0.00 1 1 S 2789425 Actinomyces sp. HMT 175 0.04 46 46 S 1655 Actinomyces naeslundii 0.01 14 14 S 1960083 Actinomyces gaoshouyii 0.01 12 12 S 461393 Actinomyces massiliensis 0.01 6 6 S 675090 Actinomyces weissii 0.00 4 4 S 2763540 Actinomyces trachealis 0.00 4 4 S 52771 Actinomyces howellii 0.00 1 1 S 544580 Actinomyces oris 0.00 1 1 S 2057800 Actinomyces qiguomingii 0.00 1 1 S 2560010 Actinomyces procaprae 0.06 66 24 G 2529408 Schaalia 0.03 34 34 S 1660 Schaalia odontolytica 0.00 5 5 S 52773 Schaalia meyeri 0.00 2 0 G1 2691889 unclassified Schaalia 0.00 1 1 S 2758572 Schaalia sp. JY-X169 0.00 1 1 S 3059028 Schaalia sp. HMT-172 0.00 1 1 S 131110 Schaalia radingae 0.03 30 0 G 2912996 Changpingibacter 0.03 30 30 S 2758440 Changpingibacter yushuensis 0.00 3 0 G 2740557 Pauljensenia 0.00 3 3 S 178339 Pauljensenia hongkongensis 0.00 2 0 G 184869 Varibaculum 0.00 2 2 S 2811781 Varibaculum prostatecancerukia 0.00 1 1 G 2050 Mobiluncus 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.00 1 0 G 2815785 Scrofimicrobium 0.00 1 0 G1 2815815 unclassified Scrofimicrobium 0.00 1 1 S 3079930 Scrofimicrobium sp. R131 0.72 777 2 O 85007 Mycobacteriales 0.69 736 0 F 1653 Corynebacteriaceae 0.69 736 109 G 1716 Corynebacterium 0.30 327 327 S 61592 Corynebacterium durum 0.17 186 186 S 43768 Corynebacterium matruchotii 0.03 36 36 S 38289 Corynebacterium jeikeium 0.02 19 19 S 38284 Corynebacterium accolens 0.01 14 14 S 679663 Corynebacterium canis 0.01 7 7 S 38304 Corynebacterium tuberculostearicum 0.00 5 0 S 441501 Corynebacterium massiliense 0.00 5 5 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 4 4 S 43765 Corynebacterium amycolatum 0.00 4 4 S 1758466 Corynebacterium faecale 0.00 4 0 S 38288 Corynebacterium genitalium 0.00 4 4 S1 585529 Corynebacterium genitalium ATCC 33030 0.00 3 3 S 2055947 Corynebacterium heidelbergense 0.00 3 3 S 35755 Corynebacterium kutscheri 0.00 3 3 S 2080740 Corynebacterium yudongzhengii 0.00 2 2 S 1414719 Corynebacterium jeddahense 0.00 2 2 S 43771 Corynebacterium urealyticum 0.00 2 2 S 53374 Corynebacterium coyleae 0.00 1 1 S 2709392 Corynebacterium qintianiae 0.00 1 1 S 108486 Corynebacterium falsenii 0.00 1 1 S 187491 Corynebacterium glaucum 0.00 1 1 S 161895 Corynebacterium phocae 0.00 1 0 G1 2624378 unclassified Corynebacterium 0.00 1 1 S 1487956 Corynebacterium sp. ATCC 6931 0.00 1 1 S 1719 Corynebacterium pseudotuberculosis 0.01 15 0 F 2805586 Lawsonellaceae 0.01 15 0 G 1847725 Lawsonella 0.01 15 15 S 1528099 Lawsonella clevelandensis 0.01 10 0 F 1762 Mycobacteriaceae 0.01 6 5 G 1763 Mycobacterium 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 4 1 G 1866885 Mycolicibacterium 0.00 2 2 S 1772 Mycolicibacterium smegmatis 0.00 1 1 S 53462 Mycolicibacterium mageritense 0.01 10 0 F 85025 Nocardiaceae 0.01 6 2 G 1817 Nocardia 0.00 3 3 S 37332 Nocardia seriolae 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975997 Nocardia sp. NBC_01503 0.00 4 3 G 1827 Rhodococcus 0.00 1 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2567884 Rhodococcus sp. SGAir0479 0.00 3 0 F 85029 Dietziaceae 0.00 3 1 G 37914 Dietzia 0.00 2 2 S 139021 Dietzia psychralcaliphila 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 84595 Gordonia polyisoprenivorans 0.09 98 0 O 85011 Kitasatosporales 0.09 98 2 F 2062 Streptomycetaceae 0.09 96 8 G 1883 Streptomyces 0.04 44 0 G1 1477431 Streptomyces albidoflavus group 0.04 44 44 S 1886 Streptomyces albidoflavus 0.03 27 3 G1 2593676 unclassified Streptomyces 0.01 6 6 S 2903645 Streptomyces sp. NBC_00310 0.00 4 4 S 2099584 Streptomyces sp. ICC4 0.00 3 3 S 2750025 Streptomyces sp. CB00271 0.00 3 3 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 2175864 Streptomyces sp. NHF165 0.00 1 1 S 3075825 Streptomyces sp. AM8-1-1 0.00 1 1 S 2907545 Streptomyces sp. GQFP 0.00 1 1 S 2903643 Streptomyces sp. NBC_00259 0.00 1 1 S 2981135 Streptomyces sp. HUAS 14-6 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2136173 Streptomyces sp. So13.3 0.00 1 1 S 2203205 Streptomyces sp. WAC 01529 0.00 4 4 S 2867410 Streptomyces profundus 0.00 4 4 S 35621 Streptomyces mobaraensis 0.00 4 4 S 2508722 Streptomyces roseicoloratus 0.00 1 1 S 1690221 Streptomyces spongiicola 0.00 1 1 S 33900 Streptomyces murinus 0.00 1 1 S 33899 Streptomyces galilaeus 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 67350 Streptomyces pseudovenezuelae 0.00 1 1 S 1901 Streptomyces clavuligerus 0.01 11 0 O 85004 Bifidobacteriales 0.01 11 0 F 31953 Bifidobacteriaceae 0.01 11 0 G 1678 Bifidobacterium 0.01 10 0 S 216816 Bifidobacterium longum 0.01 9 9 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 1 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 1 1 S 1680 Bifidobacterium adolescentis 0.01 10 0 O 85010 Pseudonocardiales 0.01 10 0 F 2070 Pseudonocardiaceae 0.00 3 0 G 1813 Amycolatopsis 0.00 3 0 G1 2618356 unclassified Amycolatopsis 0.00 3 3 S 2745196 Amycolatopsis sp. CA-230715 0.00 2 0 G 1835 Saccharopolyspora 0.00 2 2 S 455344 Saccharopolyspora gloriosae 0.00 2 0 G 1847 Pseudonocardia 0.00 2 2 S 2736640 Pseudonocardia broussonetiae 0.00 2 0 G 1851 Saccharomonospora 0.00 1 0 S 1852 Saccharomonospora viridis 0.00 1 1 S1 471857 Saccharomonospora viridis DSM 43017 0.00 1 0 S 40990 Saccharomonospora glauca 0.00 1 1 S1 928724 Saccharomonospora glauca K62 0.00 1 0 G 1137960 Allokutzneria 0.00 1 1 S 211114 Allokutzneria albata 0.00 3 0 O 85008 Micromonosporales 0.00 3 0 F 28056 Micromonosporaceae 0.00 2 0 G 1873 Micromonospora 0.00 1 1 S 356851 Micromonospora chokoriensis 0.00 1 0 G1 2617518 unclassified Micromonospora 0.00 1 1 S 3016103 Micromonospora sp. WMMD1076 0.00 1 0 G 1865 Actinoplanes 0.00 1 0 G1 2626549 unclassified Actinoplanes 0.00 1 1 S 649831 Actinoplanes sp. N902-109 0.00 2 0 O 85012 Streptosporangiales 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 83681 Nonomuraea 0.00 1 1 S 2219224 Nonomuraea phyllanthi 0.00 1 1 F 83676 Nocardiopsaceae 0.00 2 0 O 85013 Frankiales 0.00 2 0 F 74712 Frankiaceae 0.00 1 0 G 1854 Frankia 0.00 1 1 S 106370 Frankia casuarinae 0.00 1 0 G 2994362 Parafrankia 0.00 1 0 G1 2994368 unclassified Parafrankia 0.00 1 1 S 298653 Parafrankia sp. EAN1pec 0.00 2 0 O 622450 Actinopolysporales 0.00 2 0 F 622451 Actinopolysporaceae 0.00 2 0 G 1849 Actinopolyspora 0.00 2 2 S 414996 Actinopolyspora erythraea 0.00 2 0 O 622452 Kineosporiales 0.00 2 0 F 83778 Kineosporiaceae 0.00 2 2 G 33981 Kineococcus 0.00 2 0 O 2039638 Candidatus Nanopelagicales 0.00 2 1 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.04 43 0 C 84998 Coriobacteriia 0.02 24 0 O 84999 Coriobacteriales 0.01 13 2 F 1643824 Atopobiaceae 0.01 9 0 G 133925 Olsenella 0.01 8 0 G1 2638792 unclassified Olsenella 0.01 8 8 S 712411 Olsenella sp. oral taxon 807 0.00 1 0 S 133926 Olsenella uli 0.00 1 1 S1 633147 Olsenella uli DSM 7084 0.00 1 0 G 1380 Atopobium 0.00 1 0 G1 2643817 unclassified Atopobium 0.00 1 1 S 712157 Atopobium sp. oral taxon 416 0.00 1 1 G 2082587 Parolsenella 0.01 11 0 F 84107 Coriobacteriaceae 0.01 9 0 G 102106 Collinsella 0.01 9 9 S 74426 Collinsella aerofaciens 0.00 2 0 G 1472762 Enorma 0.00 2 2 S 1871019 Enorma phocaeensis 0.02 19 0 O 1643822 Eggerthellales 0.02 19 3 F 1643826 Eggerthellaceae 0.01 12 0 G 1926677 Raoultibacter 0.01 12 12 S 1907662 Raoultibacter timonensis 0.00 2 2 G 447020 Adlercreutzia 0.00 1 0 G 84162 Cryptobacterium 0.00 1 0 S 84163 Cryptobacterium curtum 0.00 1 1 S1 469378 Cryptobacterium curtum DSM 15641 0.00 1 0 G 2005386 Arabiibacter 0.00 1 1 S 1870985 Arabiibacter massiliensis 0.00 3 0 C 84992 Acidimicrobiia 0.00 3 0 O 84993 Acidimicrobiales 0.00 3 0 F 2448023 Ilumatobacteraceae 0.00 3 0 G 682522 Ilumatobacter 0.00 3 0 S 467094 Ilumatobacter coccineus 0.00 3 3 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 2 0 C 908620 Nitriliruptoria 0.00 1 0 O 908621 Euzebyales 0.00 1 0 F 908622 Euzebyaceae 0.00 1 0 G 908623 Euzebya 0.00 1 1 S 1608957 Euzebya pacifica 0.00 1 0 O 1747768 Egibacterales 0.00 1 0 F 1747769 Egibacteraceae 0.00 1 0 G 1747770 Egibacter 0.00 1 1 S 1670831 Egibacter rhizosphaerae 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 1 G 42255 Rubrobacter 0.00 1 0 C 1497346 Thermoleophilia 0.00 1 1 O 588673 Solirubrobacterales 0.69 736 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.69 736 31 P 1117 Cyanobacteriota 0.66 705 141 C 3028117 Cyanophyceae 0.32 345 0 C1 1301283 Oscillatoriophycideae 0.25 267 1 O 1150 Oscillatoriales 0.23 251 0 F 2934961 Sirenicapillariaceae 0.23 251 0 G 2596745 Limnospira 0.23 251 0 S 147322 Limnospira indica 0.23 244 244 S1 2760438 Limnospira indica BM01 0.01 7 7 S1 376219 Limnospira indica PCC 8005 0.01 7 0 F 1892252 Microcoleaceae 0.01 7 6 G 54304 Planktothrix 0.00 1 0 S 1160 Planktothrix agardhii 0.00 1 1 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.01 7 0 F 1892254 Oscillatoriaceae 0.01 6 0 G 1198 Phormidium 0.01 6 0 S 2974039 Phormidium yuhuli 0.01 6 6 S1 2940671 Phormidium yuhuli AB48 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.00 1 0 O1 1892256 Oscillatoriales incertae sedis 0.00 1 0 G 2023214 Koinonema 0.00 1 0 G1 2781947 unclassified Koinonema 0.00 1 1 S 222819 [Phormidium] sp. ETS-05 0.07 78 0 O 1118 Chroococcales 0.05 51 0 F 1890449 Microcystaceae 0.05 51 0 G 1125 Microcystis 0.05 51 0 G1 2643300 unclassified Microcystis 0.05 51 51 S 1967666 Microcystis sp. MC19 0.02 26 0 F 1890450 Aphanothecaceae 0.02 26 0 G 1453359 Candidatus Atelocyanobacterium 0.02 26 1 S 713887 Candidatus Atelocyanobacterium thalassa 0.02 25 25 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 1 1 F 2815910 Geminocystaceae 0.09 93 0 O 1955042 Gloeomargaritales 0.09 93 0 F 1955043 Gloeomargaritaceae 0.09 93 0 G 1188227 Gloeomargarita 0.09 93 0 S 1188228 Gloeomargarita lithophora 0.09 93 93 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.05 49 6 O 1161 Nostocales 0.03 28 6 F 1892259 Aphanizomenonaceae 0.01 16 0 G 752201 Sphaerospermopsis 0.01 16 0 S 984207 Sphaerospermopsis torques-reginae 0.01 16 16 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 5 0 G 748770 Dolichospermum 0.00 5 0 S 136073 Dolichospermum compactum 0.00 5 5 S1 1973481 Dolichospermum compactum NIES-806 0.00 1 0 G 110103 Anabaenopsis 0.00 1 0 S 156213 Anabaenopsis elenkinii 0.00 1 1 S1 2779889 Anabaenopsis elenkinii CCIBt3563 0.01 8 5 F 1162 Nostocaceae 0.00 3 1 G 1177 Nostoc 0.00 2 0 S 264686 Nostoc edaphicum 0.00 2 2 S1 1472755 Nostoc edaphicum CCNP1411 0.00 4 0 F 1185 Rivulariaceae 0.00 4 0 G 373984 Rivularia 0.00 4 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 4 4 S 373994 Rivularia sp. PCC 7116 0.00 2 0 F 2661849 Calotrichaceae 0.00 2 0 G 1186 Calothrix 0.00 2 0 G1 2619626 unclassified Calothrix 0.00 2 2 S 2005462 Calothrix sp. NIES-3974 0.00 1 0 F 119859 Tolypothrichaceae 0.00 1 0 G 111782 Tolypothrix 0.00 1 0 G1 2649714 unclassified Tolypothrix 0.00 1 1 S 1188 Tolypothrix sp. PCC 7601 0.03 35 0 O 1890424 Synechococcales 0.03 34 0 F 1890426 Synechococcaceae 0.03 34 0 G 1129 Synechococcus 0.03 30 3 G1 2626047 unclassified Synechococcus 0.02 20 20 S 195250 Synechococcus sp. PCC 7336 0.01 7 7 S 321327 Synechococcus sp. JA-3-3Ab 0.00 4 1 S 32046 Synechococcus elongatus 0.00 3 3 S1 3115655 Synechococcus elongatus IITB5 0.00 1 0 F 2881426 Prochlorococcaceae 0.00 1 0 G 1218 Prochlorococcus 0.00 1 0 S 1219 Prochlorococcus marinus 0.00 1 1 S1 3014999 Prochlorococcus marinus str. MIT 1013 0.01 16 0 O 3079757 Gomontiellales 0.01 16 0 F 1890431 Chamaesiphonaceae 0.01 16 0 G 217161 Chamaesiphon 0.01 16 0 S 1173032 Chamaesiphon minutus 0.01 16 16 S1 1173020 Chamaesiphon minutus PCC 6605 0.01 8 0 O 2881377 Pseudanabaenales 0.01 8 0 F 1890436 Pseudanabaenaceae 0.01 8 0 G 1152 Pseudanabaena 0.01 8 0 G1 2593292 unclassified Pseudanabaena 0.01 7 7 S 82654 Pseudanabaena sp. PCC 7367 0.00 1 1 S 2963092 Pseudanabaena sp. Chao 1811 0.01 6 5 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 0 G 33071 Gloeobacter 0.00 1 0 S 1416614 Gloeobacter kilaueensis 0.00 1 1 S1 1183438 Gloeobacter kilaueensis JS1 0.01 6 0 O 1890505 Chroococcidiopsidales 0.01 6 0 F 1890528 Chroococcidiopsidaceae 0.01 6 6 G 54298 Chroococcidiopsis 0.00 5 0 O 3079749 Leptolyngbyales 0.00 5 0 F 1890438 Leptolyngbyaceae 0.00 5 0 F1 3081713 Leptolyngbya group 0.00 5 0 G 47251 Leptolyngbya 0.00 5 0 G1 2650499 unclassified Leptolyngbya 0.00 5 5 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 52604 Pleurocapsales 0.00 1 0 F 1890498 Dermocarpellaceae 0.00 1 0 G 102115 Stanieria 0.00 1 0 S 102116 Stanieria cyanosphaera 0.00 1 1 S1 111780 Stanieria cyanosphaera PCC 7437 0.17 180 115 P 544448 Mycoplasmatota 0.03 32 0 O 2790996 Mycoplasmoidales 0.02 19 0 F 2895623 Metamycoplasmataceae 0.02 19 6 G 2767358 Mycoplasmopsis 0.01 9 9 S 114880 Mycoplasmopsis columbinasalis 0.00 3 3 S 33923 Mycoplasmopsis felis 0.00 1 1 S 55603 Mycoplasmopsis caviae 0.01 13 1 F 2790998 Mycoplasmoidaceae 0.01 6 6 G 2995234 Mycoplasmoides 0.00 5 0 G 2791001 Malacoplasma 0.00 4 0 S 28227 Malacoplasma penetrans 0.00 4 4 S1 272633 Malacoplasma penetrans HF-2 0.00 1 1 S 2116 Malacoplasma iowae 0.00 1 1 G 2129 Ureaplasma 0.03 27 0 C 31969 Mollicutes 0.02 21 0 O 2085 Mycoplasmatales 0.02 19 0 F 2092 Mycoplasmataceae 0.02 19 0 G 2093 Mycoplasma 0.01 11 0 G1 656088 Mycoplasma mycoides group 0.01 9 9 S 1179777 Mycoplasma feriruminatoris 0.00 2 0 S 2095 Mycoplasma capricolum 0.00 2 2 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.01 8 0 G1 2683645 unclassified Mycoplasma 0.00 5 5 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 2 2 S 2967302 Mycoplasma sp. 1018B 0.00 1 1 S 2801918 Mycoplasma sp. E35C 0.00 1 0 O1 1665628 unclassified Mycoplasmatales 0.00 1 1 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 1 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 1 0 G 295595 Candidatus Hepatoplasma 0.00 1 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 1 1 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.00 3 0 O 186328 Entomoplasmatales 0.00 3 0 F 2131 Spiroplasmataceae 0.00 3 1 G 2132 Spiroplasma 0.00 2 1 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3066286 Spiroplasma endosymbiont of Crioceris asparagi 0.00 3 0 O 186329 Acholeplasmatales 0.00 3 0 F 2146 Acholeplasmataceae 0.00 2 1 G 33926 Candidatus Phytoplasma 0.00 1 0 G1 85630 16SrX (Apple proliferation group) 0.00 1 1 S 37692 Candidatus Phytoplasma mali 0.00 1 0 G 2147 Acholeplasma 0.00 1 1 S 2148 Acholeplasma laidlawii 0.01 6 0 C 1912503 Candidatus Izimaplasma 0.01 6 0 O 2975519 Candidatus Izemoplasmatales 0.00 4 0 F 2975520 Candidatus Izemoplasmataceae 0.00 4 0 G 2975521 Candidatus Xianfuyuplasma 0.00 4 4 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.00 2 0 F 3078170 Hujiaoplasmataceae 0.00 2 0 G 3078171 Hujiaoplasma 0.00 2 2 S 2725268 Hujiaoplasma nucleasis 0.05 49 0 P 200795 Chloroflexota 0.03 30 0 C 388447 Ktedonobacteria 0.03 30 0 O 388448 Ktedonobacterales 0.03 30 0 F 2692416 Ktedonosporobacteraceae 0.03 30 0 G 2692417 Ktedonosporobacter 0.03 30 30 S 2509675 Ktedonosporobacter rubrisoli 0.01 7 0 C 32061 Chloroflexia 0.01 7 0 O 32064 Chloroflexales 0.01 6 0 O1 1508594 Chloroflexineae 0.01 6 0 F 1106 Chloroflexaceae 0.01 6 0 G 1107 Chloroflexus 0.01 6 0 S 152260 Chloroflexus aggregans 0.01 6 6 S1 326427 Chloroflexus aggregans DSM 9485 0.00 1 0 O1 1508595 Roseiflexineae 0.00 1 0 F 1508635 Roseiflexaceae 0.00 1 1 G 120961 Roseiflexus 0.00 4 0 C 301297 Dehalococcoidia 0.00 4 0 O 1202465 Dehalococcoidales 0.00 4 0 F 1202464 Dehalococcoidaceae 0.00 3 2 G 670486 Dehalogenimonas 0.00 1 1 S 1536648 Dehalogenimonas etheniformans 0.00 1 1 G 61434 Dehalococcoides 0.00 3 0 C 1382928 Ardenticatenia 0.00 3 0 O 3085098 Candidatus Promineifilales 0.00 3 0 F 3085097 Candidatus Promineifilaceae 0.00 3 0 G 1988031 Candidatus Promineifilum 0.00 3 3 S 1806508 Candidatus Promineifilum breve 0.00 2 0 C 292625 Anaerolineae 0.00 2 0 O 292629 Anaerolineales 0.00 2 0 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.02 26 0 P 67819 Armatimonadota 0.02 20 0 C 1077257 Chthonomonadia 0.02 20 0 O 1077263 Chthonomonadales 0.02 20 0 F 1077264 Chthonomonadaceae 0.02 20 0 G 1077265 Chthonomonas 0.02 20 0 S 454171 Chthonomonas calidirosea 0.02 20 20 S1 1303518 Chthonomonas calidirosea T49 0.01 6 0 C 1663419 Fimbriimonadia 0.01 6 0 O 1663425 Fimbriimonadales 0.01 6 0 F 1663426 Fimbriimonadaceae 0.01 6 0 G 1005038 Fimbriimonas 0.01 6 0 S 1005039 Fimbriimonas ginsengisoli 0.01 6 6 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.00 5 0 P 1297 Deinococcota 0.00 5 1 C 188787 Deinococci 0.00 4 0 O 118964 Deinococcales 0.00 4 0 F 183710 Deinococcaceae 0.00 4 2 G 1298 Deinococcus 0.00 2 0 S 432329 Deinococcus peraridilitoris 0.00 2 2 S1 937777 Deinococcus peraridilitoris DSM 19664 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 2.72 2924 0 D1 1783270 FCB group 2.71 2914 0 D2 68336 Bacteroidota/Chlorobiota group 2.71 2906 8 P 976 Bacteroidota 1.23 1317 0 C 117743 Flavobacteriia 1.23 1317 0 O 200644 Flavobacteriales 1.07 1152 20 F 49546 Flavobacteriaceae 1.05 1124 74 G 1016 Capnocytophaga 0.42 454 454 S 1019 Capnocytophaga sputigena 0.37 398 398 S 1017 Capnocytophaga gingivalis 0.10 107 9 G1 2640652 unclassified Capnocytophaga 0.09 95 95 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 3 3 S 2748316 Capnocytophaga sp. oral taxon 902 0.07 78 78 S 327575 Capnocytophaga leadbetteri 0.01 7 7 S 2708117 Capnocytophaga endodontalis 0.01 6 6 S 45243 Capnocytophaga haemolytica 0.00 4 1 G 237 Flavobacterium 0.00 2 2 S 2704140 Flavobacterium bizetiae 0.00 1 1 S 2906078 Flavobacterium oreochromis 0.00 2 0 G 286104 Winogradskyella 0.00 2 2 S 2686077 Winogradskyella forsetii 0.00 1 0 G 379068 Galbibacter 0.00 1 0 G1 2632773 unclassified Galbibacter 0.00 1 1 S 1170699 Galbibacter sp. BG1 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.14 145 56 F 2762318 Weeksellaceae 0.04 46 0 F1 2782232 Chryseobacterium group 0.04 43 10 G 59732 Chryseobacterium 0.02 24 0 G1 2593645 unclassified Chryseobacterium 0.02 23 23 S 2713414 Chryseobacterium sp. POL2 0.00 1 1 S 3138177 Chryseobacterium sp. POE27 0.01 9 9 S 1813611 Chryseobacterium cucumeris 0.00 3 1 G 2782231 Kaistella 0.00 2 2 S 2820270 Candidatus Kaistella beijingensis 0.02 17 0 G 59735 Bergeyella 0.02 17 17 S 1585976 Bergeyella cardium 0.01 11 0 G 59734 Empedobacter 0.01 11 11 S 343874 Empedobacter falsenii 0.00 5 0 G 308865 Elizabethkingia 0.00 4 0 G1 2685307 unclassified Elizabethkingia 0.00 4 4 S 2583851 Elizabethkingia sp. JS20170427COW 0.00 1 1 S 238 Elizabethkingia meningoseptica 0.00 3 2 G 501783 Cloacibacterium 0.00 1 1 S 2004710 Cloacibacterium caeni 0.00 3 0 G 1778601 Apibacter 0.00 3 3 G1 2630820 unclassified Apibacter 0.00 3 0 G 2766734 Faecalibacter 0.00 3 0 G1 2766735 unclassified Faecalibacter 0.00 3 3 S 3103144 Faecalibacter sp. LW9 0.00 1 0 G 34084 Riemerella 0.00 1 1 S 34085 Riemerella anatipestifer 0.02 20 0 O1 313602 Flavobacteriales incertae sedis 0.02 20 0 G 336809 Candidatus Karelsulcia 0.02 20 20 S 336810 Candidatus Karelsulcia muelleri 0.75 809 0 C 200643 Bacteroidia 0.75 809 4 O 171549 Bacteroidales 0.61 656 26 F 171552 Prevotellaceae 0.37 393 35 G 838 Prevotella 0.20 212 0 G1 2638335 unclassified Prevotella 0.17 184 184 S 712471 Prevotella sp. oral taxon 475 0.02 25 25 S 2937774 Prevotella sp. E15-22 0.00 2 0 S 652716 Prevotella sp. oral taxon 299 0.00 2 2 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 1 1 S 2691580 Prevotella sp. Rep29 0.06 60 60 S 28132 Prevotella melaninogenica 0.03 31 31 S 2801997 Prevotella herbatica 0.01 13 0 S 589436 Prevotella fusca 0.01 13 13 S1 1236517 Prevotella fusca JCM 17724 0.01 10 10 S 28128 Prevotella corporis 0.01 10 10 S 28129 Prevotella denticola 0.01 8 8 S 28133 Prevotella nigrescens 0.01 7 7 S 28131 Prevotella intermedia 0.01 6 0 S 589437 Prevotella scopos 0.01 6 6 S1 1236518 Prevotella scopos JCM 17725 0.00 1 1 S 470565 Prevotella histicola 0.11 120 0 G 2884814 Pseudoprevotella 0.11 120 120 S 2133944 Pseudoprevotella muciniphila 0.09 99 12 G 2974251 Segatella 0.04 46 46 S 28135 Segatella oris 0.02 20 18 S 165179 Segatella copri 0.00 2 2 S1 537011 Segatella copri DSM 18205 0.02 20 20 S 2518605 Segatella hominis 0.00 1 1 S 77095 Segatella bryantii 0.01 16 0 G 2974257 Hoylesella 0.01 14 14 S 76123 Hoylesella enoeca 0.00 2 2 S 28127 Hoylesella buccalis 0.00 2 2 G 577309 Paraprevotella 0.11 117 0 F 171551 Porphyromonadaceae 0.11 117 0 G 836 Porphyromonas 0.10 112 0 G1 2645799 unclassified Porphyromonas 0.10 112 112 S 712435 Porphyromonas sp. oral taxon 275 0.00 5 5 S 322095 Porphyromonas somerae 0.01 14 0 F 2005525 Tannerellaceae 0.01 13 0 G 195950 Tannerella 0.01 13 13 S 712710 Tannerella serpentiformis 0.00 1 1 G 375288 Parabacteroides 0.01 12 0 F 815 Bacteroidaceae 0.01 12 1 G 816 Bacteroides 0.01 6 6 S 817 Bacteroides fragilis 0.00 2 2 S 818 Bacteroides thetaiotaomicron 0.00 2 2 S 329854 Bacteroides intestinalis 0.00 1 1 S 477666 Bacteroides graminisolvens 0.00 2 0 F 171550 Rikenellaceae 0.00 2 0 G 1647173 Acetobacteroides 0.00 2 0 G1 1760810 environmental samples 0.00 2 2 S 1760811 uncultured Acetobacteroides sp. 0.00 2 0 F 2005520 Dysgonomonadaceae 0.00 2 0 G 156973 Dysgonomonas 0.00 2 2 G1 2630389 unclassified Dysgonomonas 0.00 1 0 F 2005473 Muribaculaceae 0.00 1 1 G 1918540 Muribaculum 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.71 765 0 C 768503 Cytophagia 0.71 765 0 O 768507 Cytophagales 0.69 739 0 F 89373 Cytophagaceae 0.69 739 0 G 107 Spirosoma 0.69 736 736 S 2666025 Spirosoma endbachense 0.00 2 0 G1 2621999 unclassified Spirosoma 0.00 2 2 S 2745947 Spirosoma sp. KUDC1026 0.00 1 1 S 2735870 Spirosoma taeanense 0.02 22 0 F 1853232 Hymenobacteraceae 0.02 21 14 G 89966 Hymenobacter 0.01 6 0 G1 2615202 unclassified Hymenobacter 0.00 5 5 S 3093922 Hymenobacter sp. GOD-10R 0.00 1 1 S 2932250 Hymenobacter sp. 5317J-9 0.00 1 1 S 1705399 Hymenobacter monticola 0.00 1 0 G 323449 Pontibacter 0.00 1 0 G1 2648980 unclassified Pontibacter 0.00 1 1 S 3074898 Pontibacter sp. G13 0.00 3 0 F 1853234 Persicobacteraceae 0.00 2 0 G 1434007 Fulvitalea 0.00 2 2 S 1182444 Fulvitalea axinellae 0.00 1 0 G 59740 Persicobacter 0.00 1 1 S 387638 Persicobacter psychrovividus 0.00 1 0 F 3141702 Leadbetterellaceae 0.00 1 1 G 312278 Emticicia 0.00 4 0 C 117747 Sphingobacteriia 0.00 4 0 O 200666 Sphingobacteriales 0.00 4 0 F 84566 Sphingobacteriaceae 0.00 4 3 G 423349 Mucilaginibacter 0.00 1 1 S 2682091 Mucilaginibacter ginkgonis 0.00 3 0 C 1937959 Saprospiria 0.00 3 0 O 1936988 Saprospirales 0.00 3 0 F 1937961 Haliscomenobacteraceae 0.00 3 0 G 2349 Haliscomenobacter 0.00 3 0 S 2350 Haliscomenobacter hydrossis 0.00 3 3 S1 760192 Haliscomenobacter hydrossis DSM 1100 0.00 4 0 P 1090 Chlorobiota 0.00 4 0 C 191410 Chlorobiia 0.00 4 1 O 191411 Chlorobiales 0.00 2 0 F 2968741 Chloroherpetonaceae 0.00 2 0 G 100715 Chloroherpeton 0.00 2 0 S 100716 Chloroherpeton thalassium 0.00 2 2 S1 517418 Chloroherpeton thalassium ATCC 35110 0.00 1 1 F 191412 Chlorobiaceae 0.00 4 0 P 1853220 Rhodothermota 0.00 4 0 C 1853222 Rhodothermia 0.00 4 3 O 1853224 Rhodothermales 0.00 1 0 F 563843 Rhodothermaceae 0.00 1 0 G 2893090 Rhodocaloribacter 0.00 1 1 S 2558931 Rhodocaloribacter litoris 0.01 8 0 P 142182 Gemmatimonadota 0.01 8 0 C 219685 Gemmatimonadia 0.01 8 0 O 219686 Gemmatimonadales 0.01 8 1 F 219687 Gemmatimonadaceae 0.00 5 0 G 173479 Gemmatimonas 0.00 5 5 S 1379270 Gemmatimonas phototrophica 0.00 2 0 G 1706036 Gemmatirosa 0.00 2 2 S 861299 Gemmatirosa kalamazoonensis 0.00 1 0 P 65842 Fibrobacterota 0.00 1 0 C 204430 Fibrobacteria 0.00 1 0 O 218872 Fibrobacterales 0.00 1 0 F 204431 Fibrobacteraceae 0.00 1 0 G 832 Fibrobacter 0.00 1 0 S 833 Fibrobacter succinogenes 0.00 1 0 S1 834 Fibrobacter succinogenes subsp. succinogenes 0.00 1 1 S2 59374 Fibrobacter succinogenes subsp. succinogenes S85 0.00 1 0 P 456828 Candidatus Cloacimonadota 0.00 1 0 C 3039863 Candidatus Cloacimonadia 0.00 1 0 O 3039864 Candidatus Cloacimonadales 0.00 1 0 F 3039865 Candidatus Cloacimonadaceae 0.00 1 0 G 456826 Candidatus Cloacimonas 0.00 1 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.00 1 1 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 2.33 2500 0 P 32066 Fusobacteriota 2.33 2500 0 C 203490 Fusobacteriia 2.33 2500 1 O 203491 Fusobacteriales 1.89 2029 2 F 1129771 Leptotrichiaceae 1.89 2026 212 G 32067 Leptotrichia 0.81 866 866 S 157687 Leptotrichia wadei 0.44 472 472 S 554406 Leptotrichia hongkongensis 0.25 264 11 G1 2633022 unclassified Leptotrichia 0.11 116 116 S 712357 Leptotrichia sp. oral taxon 212 0.08 89 89 S 712362 Leptotrichia sp. oral taxon 221 0.03 30 30 S 712361 Leptotrichia sp. oral taxon 218 0.01 7 7 S 1785996 Leptotrichia sp. oral taxon 847 0.01 6 6 S 712368 Leptotrichia sp. oral taxon 498 0.00 5 5 S 3058373 Leptotrichia sp. HMT-225 0.16 173 173 S 157688 Leptotrichia hofstadii 0.02 18 18 S 109328 Leptotrichia trevisanii 0.02 18 18 S 157691 Leptotrichia shahii 0.00 3 0 S 40542 Leptotrichia buccalis 0.00 3 3 S1 523794 Leptotrichia buccalis C-1013-b 0.00 1 0 G 34104 Streptobacillus 0.00 1 1 S 34105 Streptobacillus moniliformis 0.44 468 2 F 203492 Fusobacteriaceae 0.43 466 406 G 848 Fusobacterium 0.01 12 12 S 76857 Fusobacterium polymorphum 0.01 10 0 S 1583098 Fusobacterium hwasookii 0.01 10 10 S1 1307443 Fusobacterium hwasookii ChDC F206 0.01 8 8 S 851 Fusobacterium nucleatum 0.01 8 8 S 2764326 Fusobacterium hominis 0.01 7 3 S 859 Fusobacterium necrophorum 0.00 4 4 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.01 7 4 S 155615 Fusobacterium vincentii 0.00 3 3 S1 1307427 Fusobacterium vincentii ChDC F8 0.00 5 5 S 76859 Fusobacterium animalis 0.00 2 0 G1 2648384 unclassified Fusobacterium 0.00 2 2 S 671211 Fusobacterium sp. oral taxon 203 0.00 1 1 S 2663009 Fusobacterium pseudoperiodonticum 0.00 2 0 F 3072461 Haliovirgaceae 0.00 2 0 G 3072462 Haliovirga 0.00 2 2 S 2996794 Haliovirga abyssi 0.17 181 0 D1 1783257 PVC group 0.11 116 1 P 203682 Planctomycetota 0.11 114 11 C 203683 Planctomycetia 0.08 88 0 O 112 Planctomycetales 0.08 88 7 F 126 Planctomycetaceae 0.07 72 3 G 1649453 Gimesia 0.06 69 69 S 2527964 Gimesia aquarii 0.01 8 0 G 2795778 Caulifigura 0.01 8 8 S 2527983 Caulifigura coniformis 0.00 1 0 G 118 Planctomyces 0.00 1 0 G1 2648843 unclassified Planctomyces 0.00 1 1 S 1632864 Planctomyces sp. SH-PL14 0.01 7 0 O 2691354 Pirellulales 0.00 4 0 F 2691357 Pirellulaceae 0.00 3 0 G 2795779 Rosistilla 0.00 3 3 S 2527990 Rosistilla oblonga 0.00 1 0 G 2795775 Lignipirellula 0.00 1 1 S 2528010 Lignipirellula cremea 0.00 3 3 F 2691359 Lacipirellulaceae 0.00 5 0 O 2691355 Gemmatales 0.00 5 3 F 1914233 Gemmataceae 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.00 1 0 G 2731450 Limnoglobus 0.00 1 1 S 2598579 Limnoglobus roseus 0.00 3 0 O 2691356 Isosphaerales 0.00 3 2 F 1763524 Isosphaeraceae 0.00 1 0 G 1763521 Paludisphaera 0.00 1 1 S 1387353 Paludisphaera borealis 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 1771349 Tepidisphaerales 0.00 1 0 F 1771355 Tepidisphaeraceae 0.00 1 0 G 2807511 Humisphaera 0.00 1 1 S 2807512 Humisphaera borealis 0.05 59 0 P 74201 Verrucomicrobiota 0.04 44 0 C 203494 Verrucomicrobiia 0.04 44 0 O 48461 Verrucomicrobiales 0.04 44 0 F 203557 Verrucomicrobiaceae 0.04 42 0 G 2735 Verrucomicrobium 0.04 42 0 G1 2625155 unclassified Verrucomicrobium 0.04 42 42 S 1882831 Verrucomicrobium sp. GAS474 0.00 2 0 G 2911469 Sulfuriroseicoccus 0.00 2 2 S 2707525 Sulfuriroseicoccus oceanibius 0.01 8 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 8 0 G 1541670 Methylacidimicrobium 0.01 8 8 G1 2730358 unclassified Methylacidimicrobium 0.00 4 0 C 1955630 Methylacidiphilae 0.00 4 0 O 717963 Methylacidiphilales 0.00 4 0 F 717964 Methylacidiphilaceae 0.00 4 4 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.00 3 0 C 414999 Opitutia 0.00 3 0 O 415000 Opitutales 0.00 3 1 F 134623 Opitutaceae 0.00 2 0 G 178440 Opitutus 0.00 1 0 S 107709 Opitutus terrae 0.00 1 1 S1 452637 Opitutus terrae PB90-1 0.00 1 0 G1 2649488 unclassified Opitutus 0.00 1 1 S 1882749 Opitutus sp. GAS368 0.00 4 0 P 204428 Chlamydiota 0.00 4 4 C 204429 Chlamydiia 0.00 1 0 P 134625 Kiritimatiellota 0.00 1 0 C 2907184 Tichowtungiia 0.00 1 0 O 2907185 Tichowtungiales 0.00 1 0 F 2907186 Tichowtungiaceae 0.00 1 0 G 2907187 Tichowtungia 0.00 1 1 S 2697043 Tichowtungia aerotolerans 0.00 1 0 P 256845 Lentisphaerota 0.00 1 0 C 1313211 Lentisphaeria 0.00 1 0 O 278081 Lentisphaerales 0.00 1 0 F 566277 Lentisphaeraceae 0.00 1 0 G 256846 Lentisphaera 0.00 1 1 S 1658616 Lentisphaera profundi 0.13 140 0 P 29547 Campylobacterota 0.13 140 0 C 3031852 Epsilonproteobacteria 0.13 140 1 O 213849 Campylobacterales 0.11 123 0 F 72294 Campylobacteraceae 0.11 123 72 G 194 Campylobacter 0.01 15 15 S 824 Campylobacter gracilis 0.01 10 10 S 199 Campylobacter concisus 0.01 8 1 G1 2593542 unclassified Campylobacter 0.00 4 4 S 2840180 Campylobacter sp. 19-13652 0.00 3 3 S 1660080 Campylobacter sp. RM16192 0.01 8 8 S 76517 Campylobacter hominis 0.00 5 5 S 1780362 Campylobacter geochelonis 0.00 2 2 S 200 Campylobacter curvus 0.00 1 1 S 197 Campylobacter jejuni 0.00 1 1 S 2042961 Campylobacter blaseri 0.00 1 1 S 827 Campylobacter ureolyticus 0.01 8 0 F 2932623 Sulfurospirillaceae 0.01 8 0 G 57665 Sulfurospirillum 0.01 8 0 S 66821 Sulfurospirillum multivorans 0.01 8 8 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.01 6 0 F 72293 Helicobacteraceae 0.01 6 1 G 209 Helicobacter 0.00 3 3 S 213 Helicobacter cinaedi 0.00 1 1 S 29419 Helicobacter canis 0.00 1 1 S 210 Helicobacter pylori 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 202746 Sulfurimonas 0.00 2 2 S 2672570 Sulfurimonas aquatica 0.11 121 3 P 200940 Thermodesulfobacteriota 0.05 56 0 C 3031651 Desulfuromonadia 0.05 54 0 O 69541 Desulfuromonadales 0.05 53 0 F 213421 Desulfuromonadaceae 0.05 53 53 G 890 Desulfuromonas 0.00 1 0 F 3031659 Geopsychrobacteraceae 0.00 1 0 G 37817 Desulfuromusa 0.00 1 0 G1 97902 environmental samples 0.00 1 1 S 219183 uncultured Desulfuromusa sp. 0.00 2 0 O 3031668 Geobacterales 0.00 2 2 F 213422 Geobacteraceae 0.04 47 0 C 3031646 Desulfarculia 0.04 47 0 O 453227 Desulfarculales 0.04 47 0 F 453228 Desulfarculaceae 0.04 47 0 G 453229 Desulfarculus 0.04 47 0 S 453230 Desulfarculus baarsii 0.04 47 47 S1 644282 Desulfarculus baarsii DSM 2075 0.00 5 0 C 3031449 Desulfovibrionia 0.00 5 0 O 213115 Desulfovibrionales 0.00 4 0 F 194924 Desulfovibrionaceae 0.00 1 1 G 2035811 Pseudodesulfovibrio 0.00 1 0 G 2910978 Megalodesulfovibrio 0.00 1 0 S 879 Megalodesulfovibrio gigas 0.00 1 1 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.00 1 0 G 2910984 Solidesulfovibrio 0.00 1 1 S 296842 Solidesulfovibrio carbinolicus 0.00 1 0 G 3126915 Taurinivorans 0.00 1 1 S 2787751 Taurinivorans muris 0.00 1 0 F 213117 Desulfohalobiaceae 0.00 1 0 G 45662 Desulfohalobium 0.00 1 0 S 45663 Desulfohalobium retbaense 0.00 1 1 S1 485915 Desulfohalobium retbaense DSM 5692 0.00 5 0 C 3031451 Desulfobulbia 0.00 5 0 O 3024411 Desulfobulbales 0.00 5 0 F 213121 Desulfobulbaceae 0.00 5 0 G 893 Desulfobulbus 0.00 5 5 S 1986146 Desulfobulbus oralis 0.00 4 0 C 67799 Thermodesulfobacteria 0.00 4 4 O 188710 Thermodesulfobacteriales 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 0 G 28222 Desulfobacula 0.00 1 0 S 28223 Desulfobacula toluolica 0.00 1 1 S1 651182 Desulfobacula toluolica Tol2 0.07 73 0 P 508458 Synergistota 0.07 73 0 C 649775 Synergistia 0.07 73 0 O 649776 Synergistales 0.07 73 0 F 649777 Synergistaceae 0.07 73 0 G 81411 Aminomonas 0.07 73 0 S 81412 Aminomonas paucivorans 0.07 73 73 S1 584708 Aminomonas paucivorans DSM 12260 0.05 53 0 D1 2323 Bacteria incertae sedis 0.05 53 0 D2 1783234 Bacteria candidate phyla 0.04 45 18 P 95818 Candidatus Saccharibacteria 0.02 25 0 C 2093818 Candidatus Saccharimonadia 0.01 13 0 O 2093825 Candidatus Saccharimonadales 0.01 13 0 F 2171986 Candidatus Saccharimonadaceae 0.01 13 0 G 1331051 Candidatus Saccharimonas 0.01 13 13 S 1332188 Candidatus Saccharimonas aalborgensis 0.01 12 0 O 2093819 Candidatus Nanosynbacterales 0.01 12 0 F 2093822 Candidatus Nanosynbacteraceae 0.01 12 6 G 2093823 Candidatus Nanosynbacter 0.01 6 6 S 2093824 Candidatus Nanosynbacter lyticus 0.00 2 0 G 2831665 Candidatus Mycosynbacter 0.00 2 2 S 2665156 Candidatus Mycosynbacter amalyticus 0.01 7 0 D3 95901 Candidatus Dependentiae 0.01 7 0 C 2497643 Candidatus Babeliae 0.01 7 0 O 2497644 Candidatus Babeliales 0.01 7 0 F 2953756 Candidatus Chromulinivoraceae 0.01 7 0 G 2953757 Candidatus Chromulinivorax 0.01 7 7 S 2066483 Candidatus Chromulinivorax destructor 0.00 1 0 D3 1783273 Patescibacteria group 0.00 1 0 D4 1794810 Microgenomates group 0.00 1 0 D5 2715732 Microgenomates group incertae sedis 0.00 1 0 F 2715733 Candidatus Chazhemtobacteraceae 0.00 1 0 G 2715734 Candidatus Chazhemtobacterium 0.00 1 1 S 2715735 Candidatus Chazhemtobacterium aquaticus 0.02 23 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.02 23 0 P 1293497 Nitrospinota 0.02 23 0 C 1293498 Nitrospinia 0.02 23 0 O 1293499 Nitrospinales 0.02 23 0 F 407032 Nitrospinaceae 0.02 23 0 G 35800 Nitrospina 0.02 23 23 S 1323948 Nitrospina watsonii 0.01 12 0 P 2818505 Myxococcota 0.01 12 0 P1 3031711 Polyangia 0.01 11 1 O 3031712 Polyangiales 0.01 7 0 F 1524216 Labilitrichaceae 0.01 7 0 G 1524217 Labilithrix 0.01 7 7 S 1391654 Labilithrix luteola 0.00 3 0 F 49 Polyangiaceae 0.00 3 0 G 39643 Sorangium 0.00 3 3 S 56 Sorangium cellulosum 0.00 1 0 O 3031713 Nannocystales 0.00 1 0 F 224463 Nannocystaceae 0.00 1 0 G 53 Nannocystis 0.00 1 1 S 2995304 Nannocystis poenicansa 0.01 7 0 P 57723 Acidobacteriota 0.01 6 0 C 533205 Holophagae 0.01 6 0 O 574975 Holophagales 0.01 6 0 F 574976 Holophagaceae 0.00 3 0 G 3074468 Mesoterricola 0.00 3 3 S 2927980 Mesoterricola sediminis 0.00 2 2 G 44675 Geothrix 0.00 1 0 G 35838 Holophaga 0.00 1 0 G1 89282 environmental samples 0.00 1 1 S 188475 uncultured Holophaga sp. 0.00 1 0 C 204432 Terriglobia 0.00 1 0 O 204433 Terriglobales 0.00 1 1 F 204434 Acidobacteriaceae 0.00 4 0 P 203691 Spirochaetota 0.00 4 0 C 203692 Spirochaetia 0.00 4 0 O 136 Spirochaetales 0.00 3 0 F 2845253 Treponemataceae 0.00 3 1 G 157 Treponema 0.00 1 1 S 162 Treponema phagedenis 0.00 1 1 S 165 Treponema saccharophilum 0.00 1 0 F 1643685 Borreliaceae 0.00 1 0 G 64895 Borreliella 0.00 1 1 S 29519 Borreliella garinii 0.00 3 0 P 2138240 Coprothermobacterota 0.00 3 0 C 2138243 Coprothermobacteria 0.00 3 0 O 2138246 Coprothermobacterales 0.00 3 0 F 2138247 Coprothermobacteraceae 0.00 3 0 G 68335 Coprothermobacter 0.00 3 0 S 35786 Coprothermobacter proteolyticus 0.00 3 3 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 2 0 P 200783 Aquificota 0.00 2 0 C 187857 Aquificia 0.00 2 0 O 32069 Aquificales 0.00 1 1 F 64898 Aquificaceae 0.00 1 0 F 224027 Hydrogenothermaceae 0.00 1 1 G 212790 Sulfurihydrogenibium 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 1 O 191393 Deferribacterales 0.00 1 0 F 2945021 Calditerrivibrionaceae 0.00 1 0 G 545865 Calditerrivibrio 0.00 1 0 S 477976 Calditerrivibrio nitroreducens 0.00 1 1 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 1 0 P 3018035 Bdellovibrionota 0.00 1 0 C 3031419 Bacteriovoracia 0.00 1 0 O 2024979 Bacteriovoracales 0.00 1 0 F 1652132 Halobacteriovoraceae 0.00 1 0 G 1652133 Halobacteriovorax 0.00 1 0 G1 2639665 unclassified Halobacteriovorax 0.00 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 0.00 1 0 P 40117 Nitrospirota 0.00 1 0 C 203693 Nitrospiria 0.00 1 0 O 189778 Nitrospirales 0.00 1 0 F 189779 Nitrospiraceae 0.00 1 0 G 1234 Nitrospira 0.00 1 1 S 2973512 Nitrospira tepida 0.00 1 0 D 2157 Archaea 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 224756 Methanomicrobia 0.00 1 0 O 570264 Methanocellales 0.00 1 0 F 570265 Methanocellaceae 0.00 1 0 G 570266 Methanocella 0.00 1 0 S 570267 Methanocella paludicola 0.00 1 1 S1 304371 Methanocella paludicola SANAE 0.09 95 0 D 10239 Viruses 0.08 81 0 D1 2731341 Duplodnaviria 0.08 81 0 K 2731360 Heunggongvirae 0.08 81 0 P 2731618 Uroviricota 0.08 81 0 C 2731619 Caudoviricetes 0.05 55 0 F 2946167 Peduoviridae 0.05 55 0 G 2948703 Evevirus 0.05 55 0 S 2955874 Evevirus ev239 0.05 55 55 S1 2695847 Escherichia phage ESSI2_ev239 0.02 20 0 G 186789 Punavirus 0.02 20 0 S 10678 Punavirus P1 0.02 20 20 S1 2886926 Escherichia phage P1 0.01 6 0 F 2946170 Straboviridae 0.01 6 0 F1 1198136 Tevenvirinae 0.01 6 0 G 10663 Tequatrovirus 0.01 6 0 S 2844199 Tequatrovirus gee4507 0.01 6 6 S1 2502306 Escherichia phage vB_EcoM_G4507 0.01 14 0 C 2840056 Naldaviricetes 0.01 14 0 O 2840070 Lefavirales 0.01 14 0 F 10442 Baculoviridae 0.01 14 0 G 558017 Betabaculovirus 0.01 14 0 S 3051997 Betabaculovirus chofumiferanae 0.01 14 14 S1 56947 Choristoneura fumiferana granulovirus