1.75 351 351 U 0 unclassified 98.25 19680 1 R 1 root 98.18 19667 0 R1 131567 cellular organisms 98.18 19667 714 D 2 Bacteria 82.69 16564 105 P 1224 Pseudomonadota 48.52 9719 138 C 1236 Gammaproteobacteria 45.51 9116 0 O 135614 Lysobacterales 45.51 9116 2 F 32033 Lysobacteraceae 45.44 9103 0 G 338 Xanthomonas 45.44 9103 9103 S 29447 Xanthomonas albilineans 0.05 10 9 G 40323 Stenotrophomonas 0.00 1 1 S 2045451 Stenotrophomonas indicatrix 0.00 1 0 G 68 Lysobacter 0.00 1 1 S 435897 Lysobacter capsici 1.46 292 8 O 91347 Enterobacterales 1.14 229 44 F 543 Enterobacteriaceae 0.32 65 0 G 561 Escherichia 0.32 65 60 S 562 Escherichia coli 0.01 3 3 S1 1322345 Escherichia coli ATCC 25922 0.00 1 1 S1 1446600 Escherichia coli O15:H18 0.00 1 1 S1 316435 Escherichia coli Nissle 1917 0.28 57 0 F1 2890311 Klebsiella/Raoultella group 0.28 57 1 G 570 Klebsiella 0.24 49 46 S 573 Klebsiella pneumoniae 0.01 3 3 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.02 4 4 S 548 Klebsiella aerogenes 0.01 2 1 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 1 S 1259973 Klebsiella electrica 0.15 30 1 G 547 Enterobacter 0.13 27 0 G1 354276 Enterobacter cloacae complex 0.12 24 24 S 299767 Enterobacter ludwigii 0.01 3 3 S 158836 Enterobacter hormaechei 0.01 2 2 S 881260 Enterobacter bugandensis 0.07 14 0 G 590 Salmonella 0.07 14 2 S 28901 Salmonella enterica 0.06 12 0 S1 59201 Salmonella enterica subsp. enterica 0.02 4 4 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.01 2 2 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.01 2 0 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.01 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 2 2 S2 28144 Salmonella enterica subsp. enterica serovar Derby 0.00 1 1 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.03 7 0 F1 191675 Enterobacteriaceae incertae sedis 0.03 7 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 3 0 G 1302410 Candidatus Annandia 0.01 3 3 S 1302411 Candidatus Annandia adelgestsuga 0.01 2 0 F3 84564 ant endosymbionts 0.00 1 0 G 203804 Candidatus Blochmanniella 0.00 1 1 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 0 G 1699619 Candidatus Westeberhardia 0.00 1 1 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 0 G 1906660 Candidatus Mikella 0.00 1 1 S 1778264 Candidatus Mikella endobia 0.02 4 0 G 544 Citrobacter 0.02 4 0 G1 1344959 Citrobacter freundii complex 0.00 1 1 S 546 Citrobacter freundii 0.00 1 1 S 1639133 Citrobacter portucalensis 0.00 1 1 S 1748967 Citrobacter cronae 0.00 1 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 1 1 S 1686385 Citrobacter sp. BIDMC108 0.02 4 1 F1 36866 unclassified Enterobacteriaceae 0.01 3 3 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 2 0 G 1177214 Candidatus Profftia 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.00 1 1 S 1987921 Candidatus Profftia lariciata 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.00 1 0 G 1330547 Kosakonia 0.00 1 1 S 208223 Kosakonia cowanii 0.13 27 0 F 2812006 Bruguierivoracaceae 0.13 27 0 G 84565 Sodalis 0.13 27 27 S 2697027 Sodalis ligni 0.09 19 0 F 1903409 Erwiniaceae 0.05 10 0 G 551 Erwinia 0.05 10 10 S 1922217 Candidatus Erwinia haradaeae 0.03 7 5 G 53335 Pantoea 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.00 1 1 S 553 Pantoea ananatis 0.01 2 0 G 32199 Buchnera 0.01 2 1 S 9 Buchnera aphidicola 0.00 1 1 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.02 4 3 F 1903410 Pectobacteriaceae 0.00 1 0 G 122277 Pectobacterium 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.02 4 0 F 1903414 Morganellaceae 0.01 2 0 G 637 Arsenophonus 0.01 2 2 S 638 Arsenophonus nasoniae 0.00 1 0 G 581 Morganella 0.00 1 1 S 582 Morganella morganii 0.00 1 0 G 586 Providencia 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.00 1 0 F 1903411 Yersiniaceae 0.00 1 0 G 629 Yersinia 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 649716 Yersinia pestis Pestoides G 0.12 25 0 O 72274 Pseudomonadales 0.12 25 0 F 135621 Pseudomonadaceae 0.10 21 5 G 286 Pseudomonas 0.02 4 0 G1 136841 Pseudomonas aeruginosa group 0.02 4 4 S 287 Pseudomonas aeruginosa 0.01 3 0 G1 136845 Pseudomonas putida group 0.01 3 3 S 78327 Pseudomonas mosselii 0.01 3 0 G1 136843 Pseudomonas fluorescens group 0.01 3 0 S 47883 Pseudomonas synxantha 0.01 3 3 S1 96901 Pseudomonas synxantha BG33R 0.01 2 2 S 2738125 Pseudomonas hefeiensis 0.00 1 0 G1 196821 unclassified Pseudomonas 0.00 1 1 S 3137451 Pseudomonas sp. G.S.17 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.01 2 0 G 2901189 Halopseudomonas 0.01 2 2 S 797277 Halopseudomonas litoralis 0.00 1 0 G 1654787 Thiopseudomonas 0.00 1 1 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 G 2758906 Entomomonas 0.00 1 1 S 2785331 Entomomonas asaccharolytica 0.12 25 0 O 135619 Oceanospirillales 0.06 12 0 F 28256 Halomonadaceae 0.05 10 0 F1 114403 Zymobacter group 0.02 5 0 G 33073 Zymobacter 0.02 5 5 S 33074 Zymobacter palmae 0.02 5 0 G 235572 Candidatus Portiera 0.02 5 5 S 91844 Candidatus Portiera aleyrodidarum 0.01 2 0 G 2745 Halomonas 0.01 2 2 S 3031727 Halomonas piscis 0.06 12 0 F 135620 Oceanospirillaceae 0.05 10 0 G 267849 Nitrincola 0.05 10 10 S 2614693 Nitrincola iocasae 0.00 1 0 G 28253 Marinomonas 0.00 1 1 S 2773454 Marinomonas algicola 0.00 1 0 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 0 F 255527 Saccharospirillaceae 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.11 23 0 O 135615 Cardiobacteriales 0.11 23 0 F 868 Cardiobacteriaceae 0.11 23 0 G 13275 Suttonella 0.11 23 0 G1 2908647 unclassified Suttonella 0.11 23 23 S 2908648 Suttonella sp. R2A3 0.08 16 0 O 135622 Alteromonadales 0.05 10 0 F 267888 Pseudoalteromonadaceae 0.04 8 0 G 2834759 Flocculibacter 0.04 8 8 S 2744479 Flocculibacter collagenilyticus 0.01 2 0 G 53246 Pseudoalteromonas 0.01 2 0 G1 194690 unclassified Pseudoalteromonas 0.01 2 2 S 649161 Pseudoalteromonas sp. 3J6 0.01 3 0 F 267892 Ferrimonadaceae 0.01 3 0 G 44011 Ferrimonas 0.01 3 0 G1 2620587 unclassified Ferrimonas 0.01 3 3 S 3028878 Ferrimonas sp. YFM 0.00 1 0 F 72275 Alteromonadaceae 0.00 1 1 G 1858563 Alkalimarinus 0.00 1 0 F 267890 Shewanellaceae 0.00 1 0 G 22 Shewanella 0.00 1 0 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 1 0 F 267894 Psychromonadaceae 0.00 1 0 G 67572 Psychromonas 0.00 1 0 S 357794 Psychromonas ingrahamii 0.00 1 1 S1 357804 Psychromonas ingrahamii 37 0.07 15 0 O 2887326 Moraxellales 0.07 15 0 F 468 Moraxellaceae 0.06 13 1 G 469 Acinetobacter 0.03 7 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.03 7 7 S 470 Acinetobacter baumannii 0.01 2 2 S 756892 Acinetobacter indicus 0.00 1 1 S 40214 Acinetobacter johnsonii 0.00 1 1 S 280145 Acinetobacter colistiniresistens 0.00 1 1 S 202956 Acinetobacter towneri 0.01 2 2 G 475 Moraxella 0.06 13 0 O 1240482 Orbales 0.06 13 0 F 1240483 Orbaceae 0.06 13 0 G 2894762 Zophobihabitans 0.06 13 13 S 1635327 Zophobihabitans entericus 0.06 13 0 O 135618 Methylococcales 0.06 13 0 F 403 Methylococcaceae 0.05 11 0 G 39773 Methylomicrobium 0.05 11 0 S 39775 Methylomicrobium album 0.05 11 11 S1 686340 Methylomicrobium album BG8 0.01 2 0 G 762296 Methylovulum 0.01 2 2 S 1704499 Methylovulum psychrotolerans 0.05 11 0 O 135623 Vibrionales 0.05 11 3 F 641 Vibrionaceae 0.03 6 2 G 662 Vibrio 0.01 2 2 S 666 Vibrio cholerae 0.01 2 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.00 1 0 G 657 Photobacterium 0.00 1 1 S 553611 Photobacterium leiognathi 0.00 1 0 G 511678 Aliivibrio 0.00 1 0 S 40269 Aliivibrio salmonicida 0.00 1 1 S1 316275 Aliivibrio salmonicida LFI1238 0.04 9 0 O 135625 Pasteurellales 0.04 9 0 F 712 Pasteurellaceae 0.03 7 0 G 724 Haemophilus 0.02 4 4 S 727 Haemophilus influenzae 0.01 2 2 S 729 Haemophilus parainfluenzae 0.00 1 1 S 735 Haemophilus parahaemolyticus 0.00 1 0 G 2899790 Mergibacter 0.00 1 1 S 221402 Mergibacter septicus 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 0.03 7 0 O 135613 Chromatiales 0.02 5 0 F 1046 Chromatiaceae 0.01 3 3 G 1056 Thiocapsa 0.00 1 0 G 85072 Allochromatium 0.00 1 1 S 553982 Allochromatium tepidum 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.01 2 0 F 72276 Ectothiorhodospiraceae 0.00 1 1 G 106633 Thioalkalivibrio 0.00 1 1 G 1335745 Spiribacter 0.02 5 0 O 72273 Thiotrichales 0.01 2 0 F 135616 Piscirickettsiaceae 0.01 2 2 G 34067 Cycloclasticus 0.01 2 0 F 135617 Thiotrichaceae 0.01 2 2 G 1030 Thiothrix 0.00 1 0 F 2056687 Fastidiosibacteraceae 0.00 1 0 G 2056696 Cysteiniphilum 0.00 1 0 G1 2610889 unclassified Cysteiniphilum 0.00 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.02 4 0 O 135624 Aeromonadales 0.02 4 0 F 84642 Aeromonadaceae 0.01 2 0 G 642 Aeromonas 0.01 2 2 S 648 Aeromonas caviae 0.01 2 0 G 43947 Tolumonas 0.01 2 0 G1 263764 environmental samples 0.01 2 2 S 263765 uncultured Tolumonas sp. 0.01 3 0 C1 118884 Gammaproteobacteria incertae sedis 0.01 3 0 C2 32036 sulfur-oxidizing symbionts 0.01 3 0 G 2686004 Candidatus Vondammii 0.01 3 0 G1 2687300 unclassified Candidatus Vondammii 0.01 3 3 S 2687299 Candidatus Vondammii sp. HM_W22 0.01 2 0 O 1706369 Cellvibrionales 0.00 1 0 F 1706371 Cellvibrionaceae 0.00 1 1 G 2425 Teredinibacter 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 1 F 1692041 Acidiferrobacteraceae 0.00 1 0 O 2975284 Candidatus Comchoanobacterales 0.00 1 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 1 0 G 2975286 Candidatus Comchoanobacter 0.00 1 1 S 2919598 Candidatus Comchoanobacter bicostacola 33.14 6638 46 C 28211 Alphaproteobacteria 31.92 6394 7 O 204441 Rhodospirillales 31.79 6368 0 F 2844601 Stellaceae 31.79 6368 0 G 93 Stella 31.79 6368 6368 S 94 Stella humosa 0.09 18 0 F 433 Acetobacteraceae 0.09 18 0 G 512381 Acidisoma 0.09 18 0 G1 2634065 unclassified Acidisoma 0.09 18 18 S 3040935 Acidisoma sp. PAMC 29798 0.00 1 0 F 41295 Rhodospirillaceae 0.00 1 0 G 111830 Defluviicoccus 0.00 1 1 S 111831 Defluviicoccus vanus 0.36 72 0 O 204458 Caulobacterales 0.36 72 1 F 76892 Caulobacteraceae 0.35 71 0 G 41275 Brevundimonas 0.35 71 0 G1 2622653 unclassified Brevundimonas 0.35 70 70 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 2591463 Brevundimonas sp. M20 0.24 49 7 O 766 Rickettsiales 0.20 40 0 F 942 Anaplasmataceae 0.18 36 0 F1 952 Wolbachieae 0.18 36 2 G 953 Wolbachia 0.15 31 26 G1 2640676 unclassified Wolbachia 0.01 2 2 S 2916816 Wolbachia endosymbiont of Howardula sp. 0.00 1 1 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.00 1 1 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.00 1 1 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.01 2 2 S 1845000 Candidatus Wolbachia massiliensis 0.00 1 1 S 955 Wolbachia pipientis 0.01 3 0 G 2883098 Candidatus Mesenet 0.01 3 2 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.00 1 1 G 33993 Neorickettsia 0.01 2 0 F 775 Rickettsiaceae 0.01 2 0 F1 33988 Rickettsieae 0.00 1 0 G 780 Rickettsia 0.00 1 0 G1 114277 spotted fever group 0.00 1 0 S 781 Rickettsia conorii 0.00 1 1 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.21 43 1 O 356 Hyphomicrobiales 0.11 22 0 F 118882 Brucellaceae 0.11 22 19 F1 2826938 Brucella/Ochrobactrum group 0.01 3 2 G 234 Brucella 0.00 1 0 S 29459 Brucella melitensis 0.00 1 0 S1 645169 Brucella melitensis bv. 2 0.00 1 1 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.04 8 5 F 119045 Methylobacteriaceae 0.01 3 2 G 407 Methylobacterium 0.00 1 0 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 2984843 Methylobacterium sp. FF17 0.02 5 0 F 82115 Rhizobiaceae 0.02 4 3 F1 227290 Rhizobium/Agrobacterium group 0.00 1 1 G 379 Rhizobium 0.00 1 0 F1 227292 Sinorhizobium/Ensifer group 0.00 1 0 G 28105 Sinorhizobium 0.00 1 0 S 382 Sinorhizobium meliloti 0.00 1 1 S1 1041157 Sinorhizobium meliloti WSM1022 0.01 2 0 F 41294 Nitrobacteraceae 0.01 2 0 G 374 Bradyrhizobium 0.00 1 1 S 1355477 Bradyrhizobium diazoefficiens 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 1325111 Bradyrhizobium sp. CCBAU 53338 0.01 2 0 F 69277 Phyllobacteriaceae 0.01 2 0 G 68287 Mesorhizobium 0.00 1 1 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2725666 Mesorhizobium terrae 0.00 1 0 F 2813035 Parvibaculaceae 0.00 1 0 G 256616 Parvibaculum 0.00 1 0 S 256618 Parvibaculum lavamentivorans 0.00 1 1 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 F 45404 Beijerinckiaceae 0.00 1 0 G 1156568 Methylovirgula 0.00 1 0 G1 2640612 unclassified Methylovirgula 0.00 1 1 S 2293567 Methylovirgula sp. 4M-Z18 0.00 1 0 F 2843308 Pleomorphomonadaceae 0.00 1 0 G 1572860 Hartmannibacter 0.00 1 1 S 1482074 Hartmannibacter diazotrophicus 0.10 21 1 O 204457 Sphingomonadales 0.09 18 1 F 41297 Sphingomonadaceae 0.05 11 2 G 165696 Novosphingobium 0.03 6 6 S 13688 Novosphingobium capsulatum 0.01 3 3 S 2728851 Novosphingobium olei 0.03 6 4 G 13687 Sphingomonas 0.00 1 1 S 1813879 Sphingomonas panacisoli 0.00 1 1 S 2681549 Sphingomonas profundi 0.01 2 0 F 335929 Erythrobacteraceae 0.00 1 1 G 1855416 Qipengyuania 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.04 9 4 O 204455 Rhodobacterales 0.02 4 1 F 31989 Paracoccaceae 0.01 2 2 G 265 Paracoccus 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 1 0 F 2854170 Roseobacteraceae 0.00 1 0 G 53945 Octadecabacter 0.00 1 0 G1 196158 unclassified Octadecabacter 0.00 1 1 S 2602067 Octadecabacter sp. SW4 0.01 2 0 O 2800060 Hyphomonadales 0.01 2 0 F 69657 Hyphomonadaceae 0.01 2 2 G 85 Hyphomonas 0.00 1 0 O 2800059 Maricaulales 0.00 1 1 F 2800061 Maricaulaceae 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 1 1 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.50 100 1 C 28216 Betaproteobacteria 0.46 92 3 O 80840 Burkholderiales 0.19 39 0 F 119060 Burkholderiaceae 0.11 23 12 G 32008 Burkholderia 0.05 11 0 G1 87882 Burkholderia cepacia complex 0.03 6 6 S 152500 Burkholderia dolosa 0.01 2 2 S 87883 Burkholderia multivorans 0.01 2 2 S 95485 Burkholderia stabilis 0.00 1 1 S 292 Burkholderia cepacia 0.07 14 0 G 48736 Ralstonia 0.07 14 0 G1 3116862 Ralstonia solanacearum species complex 0.07 14 14 S 305 Ralstonia solanacearum 0.01 2 1 G 1822464 Paraburkholderia 0.00 1 1 S 2571748 Paraburkholderia acidisoli 0.15 31 1 F 80864 Comamonadaceae 0.13 27 27 G 80865 Delftia 0.01 3 3 G 283 Comamonas 0.04 9 0 F 995019 Sutterellaceae 0.04 8 0 G 1918598 Turicimonas 0.04 8 8 S 1796652 Turicimonas muris 0.00 1 0 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.02 4 1 F 75682 Oxalobacteraceae 0.00 1 1 G 29580 Janthinobacterium 0.00 1 0 G 401469 Undibacterium 0.00 1 0 G1 2630295 unclassified Undibacterium 0.00 1 1 S 3048609 Undibacterium sp. CCC3.4 0.00 1 1 F1 2895353 Telluria group 0.01 2 0 F 506 Alcaligenaceae 0.01 2 0 G 290425 Advenella 0.01 2 2 S 1481665 Advenella alkanexedens 0.01 2 0 O1 224471 Burkholderiales genera incertae sedis 0.01 2 1 G 32012 Thiomonas 0.00 1 1 S 926 Thiomonas intermedia 0.01 2 0 F 2975441 Sphaerotilaceae 0.00 1 0 G 28067 Rubrivivax 0.00 1 0 S 28068 Rubrivivax gelatinosus 0.00 1 1 S1 983917 Rubrivivax gelatinosus IL144 0.00 1 1 G 93681 Roseateles 0.02 5 0 O 206351 Neisseriales 0.02 5 2 F 481 Neisseriaceae 0.01 3 1 G 482 Neisseria 0.00 1 0 G1 2623750 unclassified Neisseria 0.00 1 1 S 655307 Neisseria sp. KEM232 0.00 1 1 S 28449 Neisseria subflava 0.00 1 0 C1 119066 Betaproteobacteria incertae sedis 0.00 1 0 G 1301080 Candidatus Nasuia 0.00 1 1 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 O 206389 Rhodocyclales 0.00 1 0 F 2008795 Azonexaceae 0.00 1 0 G 88875 Ferribacterium 0.00 1 1 S 76259 Ferribacterium limneticum 0.01 2 0 C 1807140 Acidithiobacillia 0.01 2 0 O 225057 Acidithiobacillales 0.01 2 0 F 225058 Acidithiobacillaceae 0.01 2 2 G 119977 Acidithiobacillus 9.74 1951 542 D1 1783272 Terrabacteria group 4.10 821 25 P 1239 Bacillota 2.75 551 3 C 91061 Bacilli 1.41 283 1 O 1385 Bacillales 1.07 214 1 F 186817 Bacillaceae 0.91 183 0 G 84406 Virgibacillus 0.91 183 183 S 447199 Virgibacillus salarius 0.06 12 0 G 1386 Bacillus 0.02 5 0 G1 653685 Bacillus subtilis group 0.02 4 0 G2 1938374 Bacillus amyloliquefaciens group 0.01 2 2 S 1390 Bacillus amyloliquefaciens 0.01 2 2 S 492670 Bacillus velezensis 0.00 1 1 S 1423 Bacillus subtilis 0.02 4 0 G1 86661 Bacillus cereus group 0.01 2 2 S 1392 Bacillus anthracis 0.00 1 1 S 1396 Bacillus cereus 0.00 1 1 S 1405 Bacillus mycoides 0.01 3 0 G1 1792192 Bacillus altitudinis complex 0.01 3 3 S 293387 Bacillus altitudinis 0.03 6 0 G 2893056 Halalkalibacter 0.03 6 6 S 199441 Halalkalibacter krulwichiae 0.02 5 0 G 175304 Lentibacillus 0.02 5 5 S 1472767 Lentibacillus amyloliquefaciens 0.01 2 2 G 2893057 Shouchella 0.00 1 1 G 1055323 Aeribacillus 0.00 1 0 G 2675232 Neobacillus 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070683 Neobacillus sp. OS1-33 0.00 1 1 G 2837504 Heyndrickxia 0.00 1 0 G 2837508 Rossellomorea 0.00 1 1 S 218284 Rossellomorea vietnamensis 0.00 1 0 G 2800373 Priestia 0.00 1 1 S 1404 Priestia megaterium 0.27 54 0 F 90964 Staphylococcaceae 0.27 54 4 G 1279 Staphylococcus 0.09 19 19 S 1282 Staphylococcus epidermidis 0.08 17 17 S 1280 Staphylococcus aureus 0.03 6 6 S 28035 Staphylococcus lugdunensis 0.01 3 3 S 2044912 Staphylococcus debuckii 0.01 3 3 S 29378 Staphylococcus arlettae 0.01 2 2 S 29382 Staphylococcus cohnii 0.05 10 0 F 186822 Paenibacillaceae 0.05 10 1 G 44249 Paenibacillus 0.03 7 2 G1 185978 unclassified Paenibacillus 0.01 3 3 S 2741301 Paenibacillus sp. URB8-2 0.00 1 1 S 715179 Paenibacillus sp. sptzw28 0.00 1 1 S 2921460 Paenibacillus sp. FSL K6-1096 0.00 1 0 S 1406 Paenibacillus polymyxa 0.00 1 1 S1 1413214 Paenibacillus polymyxa SQR-21 0.00 1 1 S 1451 Paenibacillus amylolyticus 0.01 2 1 F 186824 Thermoactinomycetaceae 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 F 539003 Bacillales Family X. Incertae Sedis 0.00 1 0 G 1609627 Hydrogenibacillus 0.00 1 0 G1 2773237 unclassified Hydrogenibacillus 0.00 1 1 S 2866627 Hydrogenibacillus sp. N12 1.32 265 3 O 186826 Lactobacillales 0.97 195 0 F 81852 Enterococcaceae 0.96 193 0 G 1350 Enterococcus 0.94 189 189 S 1351 Enterococcus faecalis 0.01 2 2 S 1352 Enterococcus faecium 0.01 2 0 S 1354 Enterococcus hirae 0.01 2 2 S1 768486 Enterococcus hirae ATCC 9790 0.01 2 0 G 51668 Tetragenococcus 0.00 1 1 S 51669 Tetragenococcus halophilus 0.00 1 1 S 526944 Tetragenococcus osmophilus 0.24 49 0 F 1300 Streptococcaceae 0.24 49 3 G 1301 Streptococcus 0.21 43 43 S 1308 Streptococcus thermophilus 0.00 1 1 S 82348 Streptococcus pluranimalium 0.00 1 1 S 68892 Streptococcus infantis 0.00 1 0 S 1313 Streptococcus pneumoniae 0.00 1 1 S1 869311 Streptococcus pneumoniae SPN032672 0.08 17 1 F 33958 Lactobacillaceae 0.02 5 0 G 2767842 Lactiplantibacillus 0.02 5 5 S 1590 Lactiplantibacillus plantarum 0.01 3 1 G 1578 Lactobacillus 0.01 2 2 S 147802 Lactobacillus iners 0.01 2 0 G 46255 Weissella 0.01 2 2 S 1249 Weissella paramesenteroides 0.01 2 2 G 2767889 Loigolactobacillus 0.00 1 1 G 46254 Oenococcus 0.00 1 1 G 2767887 Ligilactobacillus 0.00 1 0 G 2930384 Periweissella 0.00 1 1 S 2506420 Periweissella cryptocerci 0.00 1 1 G 1243 Leuconostoc 0.00 1 0 F 186827 Aerococcaceae 0.00 1 0 G 1375 Aerococcus 0.00 1 1 S 1376 Aerococcus urinae 0.97 194 6 C 186801 Clostridia 0.40 81 4 O 186802 Eubacteriales 0.22 45 0 F 216572 Oscillospiraceae 0.13 27 18 G 216851 Faecalibacterium 0.04 9 9 S 853 Faecalibacterium prausnitzii 0.04 9 5 G 292632 Subdoligranulum 0.02 4 4 S 214851 Subdoligranulum variabile 0.03 6 5 G 2892396 Vescimonas 0.00 1 1 S 2714353 Vescimonas fastidiosa 0.00 1 0 G 3048127 Thermocaproicibacter 0.00 1 1 S 2966552 Thermocaproicibacter melissae 0.00 1 1 G 2834348 Caproicibacterium 0.00 1 0 G 1263 Ruminococcus 0.00 1 1 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.09 18 17 F 31984 Heliobacteriaceae 0.00 1 0 G 79598 Heliorestis 0.00 1 1 S 356322 Heliorestis convoluta 0.04 8 0 F 31979 Clostridiaceae 0.04 8 0 G 1485 Clostridium 0.02 5 0 S 1491 Clostridium botulinum 0.02 5 5 S1 1408283 Clostridium botulinum CDC_1436 0.01 3 3 S 1502 Clostridium perfringens 0.01 2 0 F 1491775 Proteinivoraceae 0.01 2 0 G 2838170 Alkalicella 0.01 2 2 S 2731377 Alkalicella caledoniensis 0.01 2 0 O1 538999 Eubacteriales incertae sedis 0.00 1 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 1 1 G 73918 Thermaerobacter 0.00 1 0 G 1686313 Fenollaria 0.00 1 1 S 938288 Fenollaria massiliensis 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 1 G 3046369 Aristaeella 0.00 1 0 F 3085642 Butyricicoccaceae 0.00 1 0 G 1928820 Intestinibacillus 0.00 1 0 G1 2635293 unclassified Intestinibacillus 0.00 1 1 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.26 53 0 O 53433 Halanaerobiales 0.26 53 0 F 53434 Halobacteroidaceae 0.26 53 0 G 42417 Halobacteroides 0.26 53 0 S 42422 Halobacteroides halobius 0.26 53 53 S1 748449 Halobacteroides halobius DSM 5150 0.26 52 0 O 3085636 Lachnospirales 0.26 52 3 F 186803 Lachnospiraceae 0.07 15 0 G 28050 Lachnospira 0.07 15 15 S 39485 Lachnospira eligens 0.04 8 2 G 572511 Blautia 0.02 4 0 S 40520 Blautia obeum 0.01 2 2 S1 411459 Blautia obeum ATCC 29174 0.01 2 2 S1 657314 Blautia obeum A2-162 0.01 2 0 G1 2648079 unclassified Blautia 0.01 2 2 S 2479767 Blautia sp. SC05B48 0.02 4 0 G 1766253 Agathobacter 0.02 4 4 S 39491 Agathobacter rectalis 0.02 4 0 G 1164882 Lachnoanaerobaculum 0.01 3 3 S 617123 Lachnoanaerobaculum umeaense 0.00 1 1 S 2490855 Lachnoanaerobaculum gingivalis 0.01 3 3 G 841 Roseburia 0.01 3 0 G 2944193 Simiaoa 0.01 3 3 S 2763672 Simiaoa sunii 0.01 3 0 G 1649459 Hungatella 0.01 3 3 S 154046 Hungatella hathewayi 0.01 2 0 G 830 Butyrivibrio 0.00 1 0 S 43305 Butyrivibrio proteoclasticus 0.00 1 1 S1 515622 Butyrivibrio proteoclasticus B316 0.00 1 1 S 45851 Butyrivibrio crossotus 0.01 2 0 G 2163168 Kineothrix 0.01 2 0 G1 2625420 unclassified Kineothrix 0.01 2 2 S 3070215 Kineothrix sp. MB12-C1 0.01 2 0 G 248744 Marvinbryantia 0.01 2 0 S 168384 Marvinbryantia formatexigens 0.01 2 2 S1 478749 Marvinbryantia formatexigens DSM 14469 0.00 1 0 G 3088373 Chakrabartyella 0.00 1 1 S 2918914 Chakrabartyella piscis 0.00 1 0 G 207244 Anaerostipes 0.00 1 1 S 649756 Anaerostipes hadrus 0.00 1 0 G 46205 Pseudobutyrivibrio 0.00 1 1 S 185007 Pseudobutyrivibrio xylanivorans 0.01 2 0 O 3082720 Peptostreptococcales 0.01 2 0 F 3030910 Anaerovoracaceae 0.01 2 2 G 86331 Mogibacterium 0.10 21 0 C 909932 Negativicutes 0.09 18 0 O 1843489 Veillonellales 0.09 18 0 F 31977 Veillonellaceae 0.08 17 2 G 39948 Dialister 0.07 15 15 S 487173 Dialister succinatiphilus 0.00 1 1 G 29465 Veillonella 0.01 3 0 O 909929 Selenomonadales 0.01 3 0 F 1843491 Selenomonadaceae 0.01 3 0 G 864 Pectinatus 0.01 3 3 S 865 Pectinatus frisingensis 0.07 15 0 C 526524 Erysipelotrichia 0.07 15 0 O 526525 Erysipelotrichales 0.06 13 0 F 2810280 Coprobacillaceae 0.06 13 1 G 135858 Catenibacterium 0.05 10 0 G1 2643636 unclassified Catenibacterium 0.05 10 10 S 2478954 Catenibacterium sp. co_0103 0.01 2 2 S 100886 Catenibacterium mitsuokai 0.01 2 2 F 128827 Erysipelotrichaceae 0.07 15 0 C 1737404 Tissierellia 0.07 15 0 O 1737405 Tissierellales 0.07 15 0 F 1570339 Peptoniphilaceae 0.04 8 0 G 150022 Finegoldia 0.04 8 8 S 1260 Finegoldia magna 0.02 5 0 G 165779 Anaerococcus 0.02 5 0 S 33034 Anaerococcus prevotii 0.02 5 5 S1 525919 Anaerococcus prevotii DSM 20548 0.01 2 1 G 162289 Peptoniphilus 0.00 1 1 S 3036303 Peptoniphilus genitalis 1.30 260 0 D2 1798711 Cyanobacteriota/Melainabacteria group 1.30 260 0 P 1117 Cyanobacteriota 1.30 260 40 C 3028117 Cyanophyceae 0.80 160 0 C1 1301283 Oscillatoriophycideae 0.71 142 2 O 1150 Oscillatoriales 0.66 133 0 F 2934961 Sirenicapillariaceae 0.66 133 0 G 2596745 Limnospira 0.66 133 1 S 147322 Limnospira indica 0.64 128 128 S1 2760438 Limnospira indica BM01 0.02 4 4 S1 376219 Limnospira indica PCC 8005 0.02 5 0 F 1892252 Microcoleaceae 0.02 5 5 G 54304 Planktothrix 0.01 2 0 F 1892254 Oscillatoriaceae 0.01 2 0 G 1198 Phormidium 0.01 2 0 S 2974039 Phormidium yuhuli 0.01 2 2 S1 2940671 Phormidium yuhuli AB48 0.09 18 0 O 1118 Chroococcales 0.07 14 0 F 1890449 Microcystaceae 0.07 14 0 G 1125 Microcystis 0.07 14 0 G1 2643300 unclassified Microcystis 0.07 14 14 S 1967666 Microcystis sp. MC19 0.02 4 0 F 1890450 Aphanothecaceae 0.01 3 0 G 1453359 Candidatus Atelocyanobacterium 0.01 3 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.01 3 3 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.00 1 0 G 28070 Gloeothece 0.00 1 0 S 2546356 Gloeothece citriformis 0.00 1 1 S1 65393 Gloeothece citriformis PCC 7424 0.11 22 0 O 1955042 Gloeomargaritales 0.11 22 0 F 1955043 Gloeomargaritaceae 0.11 22 0 G 1188227 Gloeomargarita 0.11 22 0 S 1188228 Gloeomargarita lithophora 0.11 22 22 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.10 21 5 O 1161 Nostocales 0.04 9 2 F 1892259 Aphanizomenonaceae 0.02 5 0 G 752201 Sphaerospermopsis 0.02 5 0 S 984207 Sphaerospermopsis torques-reginae 0.02 5 5 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 1 1 G 77021 Cylindrospermopsis 0.00 1 0 G 748770 Dolichospermum 0.00 1 0 S 136073 Dolichospermum compactum 0.00 1 1 S1 1973481 Dolichospermum compactum NIES-806 0.03 6 1 F 1162 Nostocaceae 0.02 4 0 G 1163 Anabaena 0.02 4 0 S 1165 Anabaena cylindrica 0.02 4 4 S1 272123 Anabaena cylindrica PCC 7122 0.00 1 0 G 264688 Trichormus 0.00 1 0 S 1164 Trichormus azollae 0.00 1 1 S1 551115 'Nostoc azollae' 0708 0.00 1 0 F 1185 Rivulariaceae 0.00 1 0 G 373984 Rivularia 0.00 1 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 1 1 S 373994 Rivularia sp. PCC 7116 0.03 6 5 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 1 G 33071 Gloeobacter 0.02 4 1 O 1890424 Synechococcales 0.01 2 0 F 1890426 Synechococcaceae 0.01 2 0 G 1129 Synechococcus 0.01 2 0 G1 2626047 unclassified Synechococcus 0.01 2 2 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 0 F 2881426 Prochlorococcaceae 0.00 1 0 G 167375 Cyanobium 0.00 1 0 G1 2627006 unclassified Cyanobium 0.00 1 1 S 1851505 Cyanobium sp. NIES-981 0.01 2 0 O 3079749 Leptolyngbyales 0.01 2 0 F 1890438 Leptolyngbyaceae 0.00 1 0 G 2917830 Leptothermofonsia 0.00 1 0 S 2917832 Leptothermofonsia sichuanensis 0.00 1 1 S1 2016068 Leptothermofonsia sichuanensis E412 0.00 1 0 F1 3081713 Leptolyngbya group 0.00 1 0 G 47251 Leptolyngbya 0.00 1 0 G1 2650499 unclassified Leptolyngbya 0.00 1 1 S 2812896 Leptolyngbya sp. 7M 0.01 2 0 O 3079757 Gomontiellales 0.01 2 0 F 1890431 Chamaesiphonaceae 0.01 2 0 G 217161 Chamaesiphon 0.01 2 0 S 1173032 Chamaesiphon minutus 0.01 2 2 S1 1173020 Chamaesiphon minutus PCC 6605 0.00 1 0 O 52604 Pleurocapsales 0.00 1 0 F 1890500 Hyellaceae 0.00 1 0 G 44474 Pleurocapsa 0.00 1 0 G1 2645907 unclassified Pleurocapsa 0.00 1 1 S 3040204 Pleurocapsa sp. FMAR1 0.00 1 0 O 2881377 Pseudanabaenales 0.00 1 0 F 1890436 Pseudanabaenaceae 0.00 1 0 G 1152 Pseudanabaena 0.00 1 0 G1 2593292 unclassified Pseudanabaena 0.00 1 1 S 82654 Pseudanabaena sp. PCC 7367 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 0 G1 2631661 unclassified Acaryochloris 0.00 1 1 S 2740837 Acaryochloris sp. 'Moss Beach' 1.01 203 0 P 201174 Actinomycetota 0.96 192 7 C 1760 Actinomycetes 0.41 83 4 O 85006 Micrococcales 0.17 35 0 F 2805591 Tropherymataceae 0.17 35 0 G 2038 Tropheryma 0.17 35 35 S 2039 Tropheryma whipplei 0.10 20 8 F 85023 Microbacteriaceae 0.01 3 3 G 33877 Agromyces 0.01 3 2 G 55968 Leucobacter 0.00 1 1 S 2873270 Leucobacter tenebrionis 0.01 2 0 G 33882 Microbacterium 0.01 2 0 G1 2609290 unclassified Microbacterium 0.01 2 2 S 2981139 Microbacterium sp. AB 0.01 2 2 G 33886 Rathayibacter 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2862880 Curtobacterium sp. TC1 0.00 1 0 G 1434032 Pontimonas 0.00 1 1 S 1159327 Pontimonas salivibrio 0.07 14 2 F 85020 Dermabacteraceae 0.05 10 4 G 43668 Brachybacterium 0.02 5 4 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 1903186 Brachybacterium sp. P6-10-X1 0.00 1 1 S 2017485 Brachybacterium avium 0.01 2 2 G 36739 Dermabacter 0.03 7 0 F 1268 Micrococcaceae 0.02 4 0 G 1742989 Glutamicibacter 0.01 3 0 G1 2627139 unclassified Glutamicibacter 0.01 3 3 S 1155384 Glutamicibacter sp. ZJUTW 0.00 1 1 S 37929 Glutamicibacter nicotianae 0.01 2 1 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2828862 Arthrobacter sp. Helios 0.00 1 0 G 32207 Rothia 0.00 1 1 S 43675 Rothia mucilaginosa 0.01 2 0 F 85016 Cellulomonadaceae 0.01 2 0 G 1707 Cellulomonas 0.00 1 1 S 2608402 Cellulomonas palmilytica 0.00 1 0 G1 2620175 unclassified Cellulomonas 0.00 1 1 S 2704467 Cellulomonas sp. H30R-01 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 0 S 186189 Xylanimonas cellulosilytica 0.00 1 1 S1 446471 Xylanimonas cellulosilytica DSM 15894 0.17 35 0 O 85007 Mycobacteriales 0.15 31 0 F 1653 Corynebacteriaceae 0.15 31 11 G 1716 Corynebacterium 0.05 10 10 S 43765 Corynebacterium amycolatum 0.02 5 5 S 679663 Corynebacterium canis 0.00 1 1 S 61592 Corynebacterium durum 0.00 1 1 S 53374 Corynebacterium coyleae 0.00 1 1 S 1414719 Corynebacterium jeddahense 0.00 1 1 S 38284 Corynebacterium accolens 0.00 1 1 S 35757 Corynebacterium cystitidis 0.01 3 0 F 1762 Mycobacteriaceae 0.01 2 2 G 1866885 Mycolicibacterium 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2675523 Mycobacterium sp. DL440 0.00 1 0 F 2805586 Lawsonellaceae 0.00 1 0 G 1847725 Lawsonella 0.00 1 1 S 1528099 Lawsonella clevelandensis 0.15 31 0 O 85009 Propionibacteriales 0.15 30 3 F 31957 Propionibacteriaceae 0.13 26 1 G 1912216 Cutibacterium 0.12 25 25 S 1747 Cutibacterium acnes 0.00 1 0 G 1743 Propionibacterium 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 1 G 1839 Nocardioides 0.10 21 0 O 85011 Kitasatosporales 0.10 21 1 F 2062 Streptomycetaceae 0.10 20 7 G 1883 Streptomyces 0.04 9 0 G1 2593676 unclassified Streptomyces 0.01 3 3 S 2750025 Streptomyces sp. CB00271 0.01 3 3 S 2903645 Streptomyces sp. NBC_00310 0.01 2 2 S 3075198 Streptomyces sp. ITFR-16 0.00 1 1 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 887462 Streptomyces brevispora 0.00 1 1 S 35621 Streptomyces mobaraensis 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.00 1 1 S 55404 Streptomyces netropsis 0.03 6 0 O 85012 Streptosporangiales 0.02 5 0 F 2012 Thermomonosporaceae 0.02 5 0 G 2019 Thermomonospora 0.02 5 5 S 1411117 Thermomonospora amylolytica 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 2000 Streptosporangium 0.00 1 0 S 2001 Streptosporangium roseum 0.00 1 1 S1 479432 Streptosporangium roseum DSM 43021 0.02 4 0 O 85004 Bifidobacteriales 0.02 4 0 F 31953 Bifidobacteriaceae 0.02 4 4 G 1678 Bifidobacterium 0.01 3 0 O 85008 Micromonosporales 0.01 3 0 F 28056 Micromonosporaceae 0.01 3 1 G 1873 Micromonospora 0.01 2 1 G1 2617518 unclassified Micromonospora 0.00 1 1 S 2201999 Micromonospora sp. B006 0.00 1 0 O 2037 Actinomycetales 0.00 1 0 F 2049 Actinomycetaceae 0.00 1 0 G 2692118 Winkia 0.00 1 1 S 33007 Winkia neuii 0.00 1 0 O 2039638 Candidatus Nanopelagicales 0.00 1 0 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.03 7 0 C 84998 Coriobacteriia 0.03 7 0 O 1643822 Eggerthellales 0.03 7 0 F 1643826 Eggerthellaceae 0.03 6 0 G 1926677 Raoultibacter 0.03 6 6 S 1907662 Raoultibacter timonensis 0.00 1 1 G 447020 Adlercreutzia 0.01 3 0 C 84995 Rubrobacteria 0.01 3 0 O 84996 Rubrobacterales 0.01 3 0 F 84997 Rubrobacteraceae 0.01 3 1 G 42255 Rubrobacter 0.00 1 1 S 2051957 Rubrobacter indicoceani 0.00 1 1 S 2653851 Rubrobacter tropicus 0.00 1 0 C 84992 Acidimicrobiia 0.00 1 0 O 84993 Acidimicrobiales 0.00 1 0 F 84994 Acidimicrobiaceae 0.00 1 0 G 53634 Acidimicrobium 0.00 1 0 S 53635 Acidimicrobium ferrooxidans 0.00 1 1 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.28 57 26 P 544448 Mycoplasmatota 0.10 20 6 C 31969 Mollicutes 0.06 12 0 O 2085 Mycoplasmatales 0.06 12 0 F 2092 Mycoplasmataceae 0.06 12 2 G 2093 Mycoplasma 0.03 7 0 G1 2683645 unclassified Mycoplasma 0.02 4 4 S 2801918 Mycoplasma sp. E35C 0.01 2 2 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 1 1 S 2967302 Mycoplasma sp. 1018B 0.01 3 0 G1 656088 Mycoplasma mycoides group 0.01 3 3 S 1179777 Mycoplasma feriruminatoris 0.01 2 0 O 186329 Acholeplasmatales 0.01 2 0 F 2146 Acholeplasmataceae 0.01 2 0 G 2147 Acholeplasma 0.01 2 2 S 2148 Acholeplasma laidlawii 0.03 7 0 O 2790996 Mycoplasmoidales 0.02 5 0 F 2895623 Metamycoplasmataceae 0.02 5 1 G 2767358 Mycoplasmopsis 0.01 3 3 S 55603 Mycoplasmopsis caviae 0.00 1 1 S 2109 Mycoplasmopsis synoviae 0.01 2 0 F 2790998 Mycoplasmoidaceae 0.00 1 0 G 2791001 Malacoplasma 0.00 1 0 S 28227 Malacoplasma penetrans 0.00 1 1 S1 272633 Malacoplasma penetrans HF-2 0.00 1 1 G 2995234 Mycoplasmoides 0.02 4 0 C 1912503 Candidatus Izimaplasma 0.02 4 0 O 2975519 Candidatus Izemoplasmatales 0.02 4 0 F 2975520 Candidatus Izemoplasmataceae 0.02 4 0 G 2975521 Candidatus Xianfuyuplasma 0.02 4 4 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.20 40 0 P 200795 Chloroflexota 0.17 34 0 C 388447 Ktedonobacteria 0.17 34 0 O 388448 Ktedonobacterales 0.17 34 0 F 2692416 Ktedonosporobacteraceae 0.17 34 0 G 2692417 Ktedonosporobacter 0.17 34 34 S 2509675 Ktedonosporobacter rubrisoli 0.01 3 0 C 301297 Dehalococcoidia 0.01 3 0 O 1202465 Dehalococcoidales 0.01 3 0 F 1202464 Dehalococcoidaceae 0.01 3 2 G 670486 Dehalogenimonas 0.00 1 1 G1 2638108 unclassified Dehalogenimonas 0.01 2 0 C 32061 Chloroflexia 0.01 2 0 O 32064 Chloroflexales 0.00 1 0 O1 1508594 Chloroflexineae 0.00 1 0 F 1106 Chloroflexaceae 0.00 1 1 G 1107 Chloroflexus 0.00 1 0 O1 1508595 Roseiflexineae 0.00 1 0 F 1508635 Roseiflexaceae 0.00 1 0 G 120961 Roseiflexus 0.00 1 0 G1 2609473 unclassified Roseiflexus 0.00 1 1 S 357808 Roseiflexus sp. RS-1 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.11 23 0 P 67819 Armatimonadota 0.09 18 0 C 1077257 Chthonomonadia 0.09 18 0 O 1077263 Chthonomonadales 0.09 18 0 F 1077264 Chthonomonadaceae 0.09 18 0 G 1077265 Chthonomonas 0.09 18 0 S 454171 Chthonomonas calidirosea 0.09 18 18 S1 1303518 Chthonomonas calidirosea T49 0.02 5 0 C 1663419 Fimbriimonadia 0.02 5 0 O 1663425 Fimbriimonadales 0.02 5 0 F 1663426 Fimbriimonadaceae 0.02 5 0 G 1005038 Fimbriimonas 0.02 5 0 S 1005039 Fimbriimonas ginsengisoli 0.02 5 5 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.02 4 0 P 1297 Deinococcota 0.02 4 0 C 188787 Deinococci 0.01 3 0 O 118964 Deinococcales 0.01 3 0 F 183710 Deinococcaceae 0.01 3 0 G 1298 Deinococcus 0.01 2 2 S 1768108 Deinococcus actinosclerus 0.00 1 1 S 1299 Deinococcus radiodurans 0.00 1 0 O 68933 Thermales 0.00 1 0 F 188786 Thermaceae 0.00 1 0 G 2935559 Allomeiothermus 0.00 1 0 S 52022 Allomeiothermus silvanus 0.00 1 1 S1 526227 Allomeiothermus silvanus DSM 9946 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 0.97 195 8 P 200940 Thermodesulfobacteriota 0.81 162 0 C 3031651 Desulfuromonadia 0.81 162 1 O 69541 Desulfuromonadales 0.80 161 0 F 213421 Desulfuromonadaceae 0.80 161 156 G 890 Desulfuromonas 0.02 5 5 S 1603606 Desulfuromonas soudanensis 0.06 12 0 C 67799 Thermodesulfobacteria 0.06 12 12 O 188710 Thermodesulfobacteriales 0.04 9 0 C 3031449 Desulfovibrionia 0.04 9 0 O 213115 Desulfovibrionales 0.04 9 5 F 194924 Desulfovibrionaceae 0.02 4 0 G 2910978 Megalodesulfovibrio 0.02 4 0 S 879 Megalodesulfovibrio gigas 0.02 4 4 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.02 4 0 C 3024418 Desulfobacteria 0.02 4 0 O 213118 Desulfobacterales 0.02 4 0 F 213119 Desulfobacteraceae 0.02 4 3 G 2289 Desulfobacter 0.00 1 0 G1 240138 environmental samples 0.00 1 1 S 240139 uncultured Desulfobacter sp. 0.76 152 0 D1 1783270 FCB group 0.76 152 0 D2 68336 Bacteroidota/Chlorobiota group 0.75 150 1 P 976 Bacteroidota 0.56 113 0 C 200643 Bacteroidia 0.56 113 0 O 171549 Bacteroidales 0.28 57 3 F 171552 Prevotellaceae 0.16 33 10 G 2974251 Segatella 0.11 22 17 S 165179 Segatella copri 0.02 5 5 S1 537011 Segatella copri DSM 18205 0.00 1 1 S 2518605 Segatella hominis 0.09 19 1 G 838 Prevotella 0.07 15 15 S 28125 Prevotella bivia 0.00 1 1 S 28131 Prevotella intermedia 0.00 1 1 S 28132 Prevotella melaninogenica 0.00 1 0 G1 2638335 unclassified Prevotella 0.00 1 1 S 2691580 Prevotella sp. Rep29 0.01 2 0 G 577309 Paraprevotella 0.01 2 2 S 454154 Paraprevotella clara 0.17 34 0 F 815 Bacteroidaceae 0.12 25 2 G 909656 Phocaeicola 0.07 15 15 S 821 Phocaeicola vulgatus 0.03 6 6 S 357276 Phocaeicola dorei 0.01 2 2 S 387090 Phocaeicola coprophilus 0.04 9 4 G 816 Bacteroides 0.01 2 0 G1 2646097 unclassified Bacteroides 0.01 2 2 S 2847299 Bacteroides sp. DH3716P 0.00 1 1 S 820 Bacteroides uniformis 0.00 1 1 S 477666 Bacteroides graminisolvens 0.00 1 1 S 817 Bacteroides fragilis 0.06 12 0 F 2005525 Tannerellaceae 0.06 12 5 G 375288 Parabacteroides 0.03 6 6 S 46503 Parabacteroides merdae 0.00 1 1 S 823 Parabacteroides distasonis 0.03 6 0 F 1853231 Odoribacteraceae 0.02 4 3 G 574697 Butyricimonas 0.00 1 1 S 1472416 Butyricimonas faecihominis 0.01 2 0 G 283168 Odoribacter 0.01 2 2 S 28118 Odoribacter splanchnicus 0.01 3 0 F 171551 Porphyromonadaceae 0.01 3 0 G 836 Porphyromonas 0.01 2 2 S 322095 Porphyromonas somerae 0.00 1 1 S 837 Porphyromonas gingivalis 0.00 1 0 F 171550 Rikenellaceae 0.00 1 0 G 239759 Alistipes 0.00 1 1 S 1288121 Alistipes senegalensis 0.13 26 0 C 117743 Flavobacteriia 0.13 26 2 O 200644 Flavobacteriales 0.09 19 0 O1 313602 Flavobacteriales incertae sedis 0.09 19 0 G 336809 Candidatus Karelsulcia 0.09 19 19 S 336810 Candidatus Karelsulcia muelleri 0.02 4 0 F 49546 Flavobacteriaceae 0.01 3 0 G 237 Flavobacterium 0.01 2 2 S 996 Flavobacterium columnare 0.00 1 1 S 2704140 Flavobacterium bizetiae 0.00 1 0 G 1016 Capnocytophaga 0.00 1 1 S 28188 Capnocytophaga canimorsus 0.00 1 0 F 1755828 Ichthyobacteriaceae 0.00 1 0 G 1755829 Ichthyobacterium 0.00 1 1 S 242600 Ichthyobacterium seriolicida 0.04 9 0 C 768503 Cytophagia 0.04 9 0 O 768507 Cytophagales 0.03 6 0 F 89373 Cytophagaceae 0.03 6 0 G 107 Spirosoma 0.02 4 4 S 2666025 Spirosoma endbachense 0.01 2 2 S 2735870 Spirosoma taeanense 0.01 2 0 F 1853234 Persicobacteraceae 0.01 2 0 G 1434007 Fulvitalea 0.01 2 2 S 1182444 Fulvitalea axinellae 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 323449 Pontibacter 0.00 1 0 G1 2648980 unclassified Pontibacter 0.00 1 1 S 2571030 Pontibacter sp. SGAir0037 0.00 1 0 C 117747 Sphingobacteriia 0.00 1 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 0 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 2907623 Sphingobacterium sp. SRCM116780 0.01 2 0 P 1090 Chlorobiota 0.01 2 0 C 191410 Chlorobiia 0.01 2 0 O 191411 Chlorobiales 0.01 2 0 F 2968741 Chloroherpetonaceae 0.01 2 0 G 100715 Chloroherpeton 0.01 2 0 S 100716 Chloroherpeton thalassium 0.01 2 2 S1 517418 Chloroherpeton thalassium ATCC 35110 0.27 54 0 D1 1783257 PVC group 0.20 40 0 P 203682 Planctomycetota 0.16 33 24 C 203683 Planctomycetia 0.02 4 0 O 112 Planctomycetales 0.02 4 2 F 126 Planctomycetaceae 0.00 1 1 G 1649453 Gimesia 0.00 1 0 G 2714737 Alienimonas 0.00 1 1 S 2527989 Alienimonas californiensis 0.01 3 0 O 2691356 Isosphaerales 0.01 3 3 F 1763524 Isosphaeraceae 0.01 2 0 O 2691354 Pirellulales 0.01 2 0 F 2691358 Thermoguttaceae 0.01 2 0 G 1676125 Thermogutta 0.01 2 2 S 1331910 Thermogutta terrifontis 0.02 5 0 C 2897345 Candidatus Uabimicrobiia 0.02 5 0 O 2897347 Candidatus Uabimicrobiales 0.02 5 0 F 2897348 Candidatus Uabimicrobiaceae 0.02 5 0 G 2897349 Candidatus Uabimicrobium 0.02 5 5 S 2596890 Candidatus Uabimicrobium amorphum 0.01 2 0 C 666505 Phycisphaerae 0.01 2 0 O 2483366 Sedimentisphaerales 0.01 2 0 F 2690158 Anaerohalosphaeraceae 0.01 2 0 G 2690159 Anaerohalosphaera 0.01 2 2 S 1936003 Anaerohalosphaera lusitana 0.05 10 0 P 74201 Verrucomicrobiota 0.03 7 0 P1 326457 Verrucomicrobiota incertae sedis 0.03 7 0 G 1541670 Methylacidimicrobium 0.03 7 7 G1 2730358 unclassified Methylacidimicrobium 0.00 1 0 C 203494 Verrucomicrobiia 0.00 1 0 O 48461 Verrucomicrobiales 0.00 1 0 F 203557 Verrucomicrobiaceae 0.00 1 0 G 2735 Verrucomicrobium 0.00 1 0 G1 2625155 unclassified Verrucomicrobium 0.00 1 1 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 C 414999 Opitutia 0.00 1 1 O 415001 Puniceicoccales 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.02 4 0 P 204428 Chlamydiota 0.02 4 4 C 204429 Chlamydiia 0.08 16 0 P 29547 Campylobacterota 0.08 16 0 C 3031852 Epsilonproteobacteria 0.08 16 0 O 213849 Campylobacterales 0.08 16 0 F 2932623 Sulfurospirillaceae 0.08 16 0 G 57665 Sulfurospirillum 0.08 16 0 S 66821 Sulfurospirillum multivorans 0.08 16 16 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.03 7 0 D1 2323 Bacteria incertae sedis 0.03 7 0 D2 1783234 Bacteria candidate phyla 0.03 6 0 D3 95901 Candidatus Dependentiae 0.03 6 0 C 2497643 Candidatus Babeliae 0.03 6 0 O 2497644 Candidatus Babeliales 0.03 6 0 F 2953756 Candidatus Chromulinivoraceae 0.03 6 0 G 2953757 Candidatus Chromulinivorax 0.03 6 6 S 2066483 Candidatus Chromulinivorax destructor 0.00 1 1 P 95818 Candidatus Saccharibacteria 0.01 3 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.01 3 0 P 1293497 Nitrospinota 0.01 3 0 C 1293498 Nitrospinia 0.01 3 0 O 1293499 Nitrospinales 0.01 3 0 F 407032 Nitrospinaceae 0.01 3 0 G 35800 Nitrospina 0.01 3 3 S 1323948 Nitrospina watsonii 0.01 3 0 P 203691 Spirochaetota 0.01 3 0 C 203692 Spirochaetia 0.01 3 0 O 136 Spirochaetales 0.01 3 0 F 1643685 Borreliaceae 0.01 3 0 G 64895 Borreliella 0.01 3 3 S 29519 Borreliella garinii 0.01 2 0 P 2818505 Myxococcota 0.01 2 0 P1 3031711 Polyangia 0.01 2 0 O 3031712 Polyangiales 0.01 2 0 F 49 Polyangiaceae 0.01 2 0 G 39643 Sorangium 0.01 2 2 S 56 Sorangium cellulosum 0.01 2 0 P 3018035 Bdellovibrionota 0.01 2 0 C 3031419 Bacteriovoracia 0.01 2 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 1 0 F 1652132 Halobacteriovoraceae 0.00 1 0 G 1652133 Halobacteriovorax 0.00 1 0 G1 2639665 unclassified Halobacteriovorax 0.00 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 0.01 2 0 P 32066 Fusobacteriota 0.01 2 0 C 203490 Fusobacteriia 0.01 2 0 O 203491 Fusobacteriales 0.00 1 0 F 203492 Fusobacteriaceae 0.00 1 1 G 848 Fusobacterium 0.00 1 0 F 3072461 Haliovirgaceae 0.00 1 0 G 3072462 Haliovirga 0.00 1 1 S 2996794 Haliovirga abyssi 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 P 200783 Aquificota 0.00 1 0 C 187857 Aquificia 0.00 1 0 O 32069 Aquificales 0.00 1 0 F 224027 Hydrogenothermaceae 0.00 1 1 G 212790 Sulfurihydrogenibium 0.06 12 0 D 10239 Viruses 0.06 12 0 D1 2731341 Duplodnaviria 0.06 12 0 K 2731360 Heunggongvirae 0.06 12 0 P 2731618 Uroviricota 0.06 12 0 C 2731619 Caudoviricetes 0.04 9 0 F 2946167 Peduoviridae 0.04 9 0 G 2948703 Evevirus 0.04 9 0 S 2955874 Evevirus ev239 0.04 9 9 S1 2695847 Escherichia phage ESSI2_ev239 0.01 3 0 F 2946170 Straboviridae 0.01 3 0 F1 1198136 Tevenvirinae 0.01 3 0 G 10663 Tequatrovirus 0.01 3 0 S 2844199 Tequatrovirus gee4507 0.01 3 3 S1 2502306 Escherichia phage vB_EcoM_G4507