3.49 37 37 U 0 unclassified 96.51 1022 0 R 1 root 96.51 1022 0 R1 131567 cellular organisms 96.51 1022 41 D 2 Bacteria 61.57 652 3 P 1224 Pseudomonadota 56.85 602 34 C 1236 Gammaproteobacteria 41.83 443 28 O 91347 Enterobacterales 32.58 345 52 F 543 Enterobacteriaceae 12.65 134 7 G 561 Escherichia 11.61 123 111 S 562 Escherichia coli 0.47 5 5 S1 2079157 Escherichia coli O2:H1 0.19 2 2 S1 244320 Escherichia coli O55:H7 0.19 2 2 S1 2874053 Escherichia coli O25:H1 0.09 1 1 S1 83334 Escherichia coli O157:H7 0.09 1 1 S1 1322345 Escherichia coli ATCC 25922 0.09 1 1 S1 655817 Escherichia coli ABU 83972 0.19 2 2 S 1499973 Escherichia marmotae 0.09 1 1 S 564 Escherichia fergusonii 0.09 1 1 S 208962 Escherichia albertii 5.57 59 0 F1 2890311 Klebsiella/Raoultella group 5.57 59 1 G 570 Klebsiella 5.10 54 50 S 573 Klebsiella pneumoniae 0.38 4 4 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.19 2 2 S 1463165 Klebsiella quasipneumoniae 0.09 1 1 S 244366 Klebsiella variicola 0.09 1 1 S 1134687 Klebsiella michiganensis 3.49 37 2 G 590 Salmonella 3.21 34 7 S 28901 Salmonella enterica 2.55 27 1 S1 59201 Salmonella enterica subsp. enterica 0.57 6 6 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.57 6 6 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.38 4 4 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.28 3 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.19 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.19 2 2 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.19 2 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.19 2 2 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.09 1 1 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.09 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.09 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.09 1 1 S 54736 Salmonella bongori 3.21 34 0 G 547 Enterobacter 3.12 33 0 G1 354276 Enterobacter cloacae complex 1.51 16 16 S 299767 Enterobacter ludwigii 1.42 15 15 S 158836 Enterobacter hormaechei 0.19 2 2 S 208224 Enterobacter kobei 0.09 1 1 S 881260 Enterobacter bugandensis 1.13 12 3 F1 36866 unclassified Enterobacteriaceae 0.57 6 6 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.28 3 3 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.47 5 0 F1 191675 Enterobacteriaceae incertae sedis 0.47 5 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.47 5 0 F3 84564 ant endosymbionts 0.47 5 0 G 203804 Candidatus Blochmanniella 0.47 5 4 G1 711328 unclassified Candidatus Blochmanniella 0.09 1 1 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.28 3 0 G 544 Citrobacter 0.19 2 0 G1 1344959 Citrobacter freundii complex 0.09 1 1 S 546 Citrobacter freundii 0.09 1 1 S 67828 Citrobacter gillenii 0.09 1 1 S 2971264 Citrobacter enshiensis 0.19 2 0 G 620 Shigella 0.19 2 2 S 623 Shigella flexneri 0.19 2 0 G 409304 Candidatus Ishikawella 0.19 2 0 S 168169 Candidatus Ishikawella capsulata 0.19 2 2 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.09 1 0 G 2815296 Jejubacter 0.09 1 1 S 2579935 Jejubacter calystegiae 0.09 1 0 G 2303321 Superficieibacter 0.09 1 0 G1 2645744 unclassified Superficieibacter 0.09 1 1 S 3031919 Superficieibacter sp. HKU1 0.09 1 0 G 1081630 Candidatus Schneideria 0.09 1 1 S 1081631 Candidatus Schneideria nysicola 0.09 1 0 G 1177214 Candidatus Profftia 0.09 1 0 G1 2735709 unclassified Candidatus Profftia 0.09 1 1 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.09 1 0 G 1330547 Kosakonia 0.09 1 1 S 208223 Kosakonia cowanii 2.55 27 0 F 1903409 Erwiniaceae 2.36 25 0 G 551 Erwinia 2.27 24 24 S 1922217 Candidatus Erwinia haradaeae 0.09 1 1 S 552 Erwinia amylovora 0.09 1 0 G 53335 Pantoea 0.09 1 1 S 59814 Pantoea dispersa 0.09 1 0 G 2997349 Winslowiella 0.09 1 1 S 92490 Winslowiella toletana 1.98 21 1 F 1903414 Morganellaceae 0.76 8 3 G 626 Xenorhabdus 0.28 3 0 S 40576 Xenorhabdus bovienii 0.28 3 3 S1 406818 Xenorhabdus bovienii SS-2004 0.09 1 1 S 628 Xenorhabdus nematophila 0.09 1 0 S 40577 Xenorhabdus poinarii 0.09 1 1 S1 1354304 Xenorhabdus poinarii G6 0.38 4 0 G 583 Proteus 0.19 2 2 S 584 Proteus mirabilis 0.19 2 0 S 1574161 Proteus terrae 0.19 2 2 S1 626774 Proteus terrae subsp. cibarius 0.28 3 0 G 637 Arsenophonus 0.09 1 1 S 638 Arsenophonus nasoniae 0.09 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.09 1 1 S 2879119 Arsenophonus apicola 0.28 3 2 G 29487 Photorhabdus 0.09 1 1 S 171438 Photorhabdus akhurstii 0.19 2 0 G 581 Morganella 0.19 2 2 S 582 Morganella morganii 0.57 6 0 F 1903411 Yersiniaceae 0.28 3 0 G 613 Serratia 0.09 1 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.09 1 1 S 2785630 Serratia sp. CMO1 0.09 1 0 S 82996 Serratia plymuthica 0.09 1 1 S1 1006598 Serratia plymuthica RVH1 0.09 1 1 S 614 Serratia liquefaciens 0.28 3 3 G 1927833 Candidatus Fukatsuia 0.57 6 0 F 2812006 Bruguierivoracaceae 0.57 6 0 G 84565 Sodalis 0.47 5 5 S 2697027 Sodalis ligni 0.09 1 0 G1 2636512 unclassified Sodalis 0.09 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.47 5 0 F 1903410 Pectobacteriaceae 0.38 4 0 G 122277 Pectobacterium 0.19 2 2 S 180957 Pectobacterium brasiliense 0.09 1 0 S 1905730 Pectobacterium parmentieri 0.09 1 1 S1 561231 Pectobacterium parmentieri WPP163 0.09 1 1 S 2108399 Pectobacterium punjabense 0.09 1 1 G 204037 Dickeya 0.38 4 0 F 3120698 Gallaecimonadaceae 0.38 4 0 G 745410 Gallaecimonas 0.38 4 4 S 3029055 Gallaecimonas kandeliae 0.09 1 0 F 1903412 Hafniaceae 0.09 1 1 G 635 Edwardsiella 3.68 39 0 O 135625 Pasteurellales 3.68 39 2 F 712 Pasteurellaceae 2.36 25 1 G 724 Haemophilus 2.27 24 24 S 729 Haemophilus parainfluenzae 0.66 7 0 G 713 Actinobacillus 0.66 7 0 S 718 Actinobacillus equuli 0.66 7 7 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.19 2 0 G 745 Pasteurella 0.19 2 2 S 747 Pasteurella multocida 0.09 1 0 G 75984 Mannheimia 0.09 1 1 S 85404 Mannheimia varigena 0.09 1 0 G 155493 Gallibacterium 0.09 1 1 S 750 Gallibacterium anatis 0.09 1 1 G 292486 Avibacterium 2.46 26 0 O 135614 Lysobacterales 2.46 26 0 F 32033 Lysobacteraceae 2.46 26 0 G 338 Xanthomonas 2.46 26 26 S 29447 Xanthomonas albilineans 1.32 14 0 O 135623 Vibrionales 1.32 14 0 F 641 Vibrionaceae 1.04 11 4 G 662 Vibrio 0.38 4 0 G1 2614977 unclassified Vibrio 0.19 2 2 S 2661921 Vibrio sp. THAF191c 0.09 1 1 S 2661922 Vibrio sp. THAF191d 0.09 1 1 S 2942997 Vibrio sp. J383 0.09 1 1 S 666 Vibrio cholerae 0.09 1 1 S 2572923 Vibrio taketomensis 0.09 1 0 S 52443 Vibrio tapetis 0.09 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.28 3 0 G 657 Photobacterium 0.28 3 2 S 553611 Photobacterium leiognathi 0.09 1 1 S1 48408 Photobacterium leiognathi subsp. mandapamensis 1.04 11 0 O 135622 Alteromonadales 0.66 7 0 F 267888 Pseudoalteromonadaceae 0.47 5 0 G 2834759 Flocculibacter 0.47 5 5 S 2744479 Flocculibacter collagenilyticus 0.09 1 0 G 53246 Pseudoalteromonas 0.09 1 0 G1 194690 unclassified Pseudoalteromonas 0.09 1 1 S 649161 Pseudoalteromonas sp. 3J6 0.09 1 0 G 907197 Psychrosphaera 0.09 1 1 S 1266052 Psychrosphaera aestuarii 0.28 3 0 F 267890 Shewanellaceae 0.28 3 2 G 22 Shewanella 0.09 1 1 S 712036 Shewanella dokdonensis 0.09 1 1 F 267889 Colwelliaceae 0.76 8 0 O 2887326 Moraxellales 0.76 8 0 F 468 Moraxellaceae 0.66 7 1 G 469 Acinetobacter 0.38 4 4 S 202956 Acinetobacter towneri 0.09 1 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.09 1 0 S 48296 Acinetobacter pittii 0.09 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.09 1 1 G1 196816 unclassified Acinetobacter 0.09 1 1 G 475 Moraxella 0.76 8 0 O 72274 Pseudomonadales 0.76 8 0 F 135621 Pseudomonadaceae 0.76 8 2 G 286 Pseudomonas 0.28 3 0 G1 136841 Pseudomonas aeruginosa group 0.28 3 3 S 287 Pseudomonas aeruginosa 0.19 2 1 G1 196821 unclassified Pseudomonas 0.09 1 1 S 2706126 Pseudomonas sp. OIL-1 0.09 1 1 S 2738125 Pseudomonas hefeiensis 0.66 7 0 O 135624 Aeromonadales 0.66 7 1 F 84642 Aeromonadaceae 0.28 3 0 G 642 Aeromonas 0.28 3 3 S 654 Aeromonas veronii 0.28 3 0 G 225143 Oceanisphaera 0.28 3 3 S 1903694 Oceanisphaera avium 0.47 5 0 O 135613 Chromatiales 0.28 3 1 F 1046 Chromatiaceae 0.19 2 0 G 85072 Allochromatium 0.19 2 2 S 553982 Allochromatium tepidum 0.09 1 0 F 72276 Ectothiorhodospiraceae 0.09 1 0 G 1335745 Spiribacter 0.09 1 0 S 1335746 Spiribacter salinus 0.09 1 1 S1 1260251 Spiribacter salinus M19-40 0.09 1 0 F 1676141 Wenzhouxiangellaceae 0.09 1 0 G 1676142 Wenzhouxiangella 0.09 1 1 S 1579979 Wenzhouxiangella marina 0.28 3 1 O 135619 Oceanospirillales 0.19 2 0 F 135620 Oceanospirillaceae 0.09 1 0 G 187492 Thalassolituus 0.09 1 1 S 187493 Thalassolituus oleivorans 0.09 1 0 G 459520 Neptuniibacter 0.09 1 1 S 651666 Neptuniibacter halophilus 0.09 1 0 O 72273 Thiotrichales 0.09 1 0 F 2056687 Fastidiosibacteraceae 0.09 1 0 G 2056696 Cysteiniphilum 0.09 1 0 G1 2610889 unclassified Cysteiniphilum 0.09 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.09 1 0 O 1706369 Cellvibrionales 0.09 1 1 F 1706372 Halieaceae 0.09 1 0 O 135618 Methylococcales 0.09 1 0 F 403 Methylococcaceae 0.09 1 0 G 416 Methylomonas 0.09 1 1 S 3058963 Methylomonas montana 0.09 1 0 O 135615 Cardiobacteriales 0.09 1 0 F 868 Cardiobacteriaceae 0.09 1 0 G 2717 Cardiobacterium 0.09 1 0 G1 2648856 unclassified Cardiobacterium 0.09 1 1 S 2866573 Cardiobacterium sp. Marseille-Q4385 2.74 29 1 C 28216 Betaproteobacteria 1.79 19 2 O 80840 Burkholderiales 0.57 6 0 F 119060 Burkholderiaceae 0.19 2 0 G 32008 Burkholderia 0.19 2 0 G1 87882 Burkholderia cepacia complex 0.09 1 1 S 87883 Burkholderia multivorans 0.09 1 1 S 95485 Burkholderia stabilis 0.19 2 0 G 47670 Lautropia 0.19 2 2 S 47671 Lautropia mirabilis 0.19 2 0 G 106589 Cupriavidus 0.19 2 2 S 248026 Cupriavidus pinatubonensis 0.47 5 1 F 75682 Oxalobacteraceae 0.28 3 3 F1 2895353 Telluria group 0.09 1 1 G 29580 Janthinobacterium 0.38 4 0 F 80864 Comamonadaceae 0.28 3 3 G 34072 Variovorax 0.09 1 1 G 80865 Delftia 0.19 2 0 O1 224471 Burkholderiales genera incertae sedis 0.19 2 0 G 92793 Aquabacterium 0.19 2 2 S 1296669 Aquabacterium olei 0.66 7 0 O 206351 Neisseriales 0.66 7 3 F 481 Neisseriaceae 0.38 4 0 G 482 Neisseria 0.28 3 3 S 487 Neisseria meningitidis 0.09 1 1 S 2666100 Neisseria brasiliensis 0.09 1 0 O 32003 Nitrosomonadales 0.09 1 1 F 206379 Nitrosomonadaceae 0.09 1 0 O 206389 Rhodocyclales 0.09 1 0 F 75787 Rhodocyclaceae 0.09 1 0 G 1769726 Niveibacterium 0.09 1 1 S 2811415 Niveibacterium microcysteis 1.70 18 0 C 28211 Alphaproteobacteria 0.57 6 0 O 204441 Rhodospirillales 0.57 6 0 F 2844601 Stellaceae 0.57 6 0 G 93 Stella 0.57 6 6 S 94 Stella humosa 0.57 6 1 O 356 Hyphomicrobiales 0.47 5 1 F 119045 Methylobacteriaceae 0.38 4 4 G 407 Methylobacterium 0.19 2 0 O 204457 Sphingomonadales 0.19 2 0 F 41297 Sphingomonadaceae 0.19 2 1 G 13687 Sphingomonas 0.09 1 1 S 2872652 Sphingomonas nostoxanthinifaciens 0.19 2 0 O 204458 Caulobacterales 0.19 2 0 F 76892 Caulobacteraceae 0.19 2 0 G 41275 Brevundimonas 0.19 2 0 G1 2622653 unclassified Brevundimonas 0.19 2 2 S 2560058 Brevundimonas sp. Bb-A 0.09 1 0 O 2800060 Hyphomonadales 0.09 1 0 F 69657 Hyphomonadaceae 0.09 1 1 G 85 Hyphomonas 0.09 1 0 O 204455 Rhodobacterales 0.09 1 0 F 31989 Paracoccaceae 0.09 1 0 G 2946607 Neotabrizicola 0.09 1 1 S 2807096 Neotabrizicola shimadae 29.65 314 3 D1 1783272 Terrabacteria group 24.36 258 4 P 1239 Bacillota 22.66 240 14 C 91061 Bacilli 15.68 166 12 O 186826 Lactobacillales 8.69 92 1 F 1300 Streptococcaceae 8.59 91 36 G 1301 Streptococcus 1.61 17 12 S 1308 Streptococcus thermophilus 0.28 3 3 S1 767463 Streptococcus thermophilus ND03 0.19 2 2 S1 322159 Streptococcus thermophilus LMD-9 1.04 11 11 S 1314 Streptococcus pyogenes 0.66 7 0 G1 671232 Streptococcus anginosus group 0.57 6 6 S 1328 Streptococcus anginosus 0.09 1 1 S 1338 Streptococcus intermedius 0.38 4 4 S 1313 Streptococcus pneumoniae 0.28 3 3 S 1310 Streptococcus sobrinus 0.19 2 2 S 68892 Streptococcus infantis 0.19 2 2 S 1311 Streptococcus agalactiae 0.19 2 1 G1 2608887 unclassified Streptococcus 0.09 1 1 S 3231906 Streptococcus sp. ZY19097 0.09 1 1 S 2490633 Streptococcus periodonticum 0.09 1 1 S 33040 Streptococcus milleri 0.09 1 1 S 1346 Streptococcus iniae 0.09 1 1 S 1111760 Streptococcus troglodytae 0.09 1 1 S 2021971 Streptococcus respiraculi 0.09 1 0 G1 119603 Streptococcus dysgalactiae group 0.09 1 0 S 1334 Streptococcus dysgalactiae 0.09 1 1 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.09 1 1 S 1305 Streptococcus sanguinis 3.12 33 0 F 81852 Enterococcaceae 3.12 33 0 G 1350 Enterococcus 2.64 28 28 S 1351 Enterococcus faecalis 0.28 3 3 S 1352 Enterococcus faecium 0.09 1 0 S 1354 Enterococcus hirae 0.09 1 1 S1 768486 Enterococcus hirae ATCC 9790 0.09 1 1 S 44008 Enterococcus cecorum 1.13 12 2 F 33958 Lactobacillaceae 0.28 3 1 G 1578 Lactobacillus 0.19 2 0 S 1584 Lactobacillus delbrueckii 0.09 1 0 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.09 1 1 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.09 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.28 3 0 G 2742598 Limosilactobacillus 0.28 3 3 S 1598 Limosilactobacillus reuteri 0.28 3 0 G 2767887 Ligilactobacillus 0.28 3 3 S 1605 Ligilactobacillus animalis 0.09 1 0 G 2767878 Bombilactobacillus 0.09 1 1 S 1303590 Bombilactobacillus bombi 1.04 11 2 F 186827 Aerococcaceae 0.47 5 0 G 2862144 Ruoffia 0.47 5 5 S 87458 Ruoffia tabacinasalis 0.28 3 2 G 1375 Aerococcus 0.09 1 1 S 87541 Aerococcus christensenii 0.09 1 0 G 46123 Abiotrophia 0.09 1 1 S 46125 Abiotrophia defectiva 0.57 6 0 F 186828 Carnobacteriaceae 0.47 5 0 G 117563 Granulicatella 0.47 5 5 S 46124 Granulicatella adiacens 0.09 1 1 G 29393 Dolosigranulum 5.67 60 5 O 1385 Bacillales 3.02 32 1 F 186817 Bacillaceae 1.70 18 0 G 1386 Bacillus 1.32 14 0 G1 653685 Bacillus subtilis group 0.66 7 0 G2 1938374 Bacillus amyloliquefaciens group 0.57 6 6 S 492670 Bacillus velezensis 0.09 1 1 S 1390 Bacillus amyloliquefaciens 0.47 5 4 S 1423 Bacillus subtilis 0.09 1 1 S1 86029 Bacillus subtilis subsp. natto 0.19 2 1 S 1452 Bacillus atrophaeus 0.09 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.19 2 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.19 2 2 S 2841656 Bacillus sp. ZHX3 0.09 1 0 G1 86661 Bacillus cereus group 0.09 1 1 S 1428 Bacillus thuringiensis 0.09 1 0 G1 1792192 Bacillus altitudinis complex 0.09 1 1 S 293387 Bacillus altitudinis 0.28 3 1 G 2837504 Heyndrickxia 0.19 2 2 S 1398 Heyndrickxia coagulans 0.28 3 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.28 3 0 S 86665 Halalkalibacterium halodurans 0.28 3 3 S1 272558 Halalkalibacterium halodurans C-125 0.19 2 0 G 84406 Virgibacillus 0.19 2 2 S 447199 Virgibacillus salarius 0.19 2 0 G 2800373 Priestia 0.19 2 2 S 1404 Priestia megaterium 0.09 1 1 G 2675231 Mesobacillus 0.09 1 1 G 2685905 Salicibibacter 0.09 1 0 G 400634 Lysinibacillus 0.09 1 0 S 1421 Lysinibacillus sphaericus 0.09 1 1 S1 444177 Lysinibacillus sphaericus C3-41 1.04 11 0 F 90964 Staphylococcaceae 0.94 10 0 G 1279 Staphylococcus 0.76 8 8 S 1280 Staphylococcus aureus 0.09 1 1 S 1282 Staphylococcus epidermidis 0.09 1 0 G1 2815305 Staphylococcus intermedius group 0.09 1 1 S 283734 Staphylococcus pseudintermedius 0.09 1 0 G 2803850 Mammaliicoccus 0.09 1 1 S 1296 Mammaliicoccus sciuri 0.38 4 0 F 186823 Alicyclobacillaceae 0.28 3 0 G 29330 Alicyclobacillus 0.28 3 3 S 2931921 Alicyclobacillus mengziensis 0.09 1 0 G 1129704 Kyrpidia 0.09 1 1 S 2055160 Kyrpidia spormannii 0.28 3 0 F 186820 Listeriaceae 0.28 3 0 G 1637 Listeria 0.19 2 0 S 1638 Listeria ivanovii 0.19 2 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.19 2 2 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.09 1 0 G1 2642072 unclassified Listeria 0.09 1 1 S 1844999 Listeria sp. PSOL-1 0.28 3 0 F 539738 Gemellaceae 0.28 3 3 G 1378 Gemella 0.09 1 0 F 186821 Sporolactobacillaceae 0.09 1 1 G 2077 Sporolactobacillus 0.09 1 0 F 186822 Paenibacillaceae 0.09 1 1 G 44249 Paenibacillus 0.66 7 0 C 186801 Clostridia 0.28 3 0 O 186802 Eubacteriales 0.09 1 0 F 3047432 Maliibacteriaceae 0.09 1 0 G 3047433 Maliibacterium 0.09 1 1 S 2086585 Maliibacterium massiliense 0.09 1 0 F 216572 Oscillospiraceae 0.09 1 0 G 1263 Ruminococcus 0.09 1 1 G1 2608920 unclassified Ruminococcus 0.09 1 0 F 31979 Clostridiaceae 0.09 1 1 G 1485 Clostridium 0.19 2 0 O 53433 Halanaerobiales 0.19 2 0 F 53434 Halobacteroidaceae 0.19 2 0 G 42417 Halobacteroides 0.19 2 0 S 42422 Halobacteroides halobius 0.19 2 2 S1 748449 Halobacteroides halobius DSM 5150 0.09 1 0 O 3082720 Peptostreptococcales 0.09 1 1 F 186804 Peptostreptococcaceae 0.09 1 0 O 3085636 Lachnospirales 0.09 1 0 F 186803 Lachnospiraceae 0.09 1 1 G 1164882 Lachnoanaerobaculum 0.66 7 0 C 909932 Negativicutes 0.57 6 0 O 1843489 Veillonellales 0.57 6 0 F 31977 Veillonellaceae 0.47 5 2 G 29465 Veillonella 0.28 3 3 S 29466 Veillonella parvula 0.09 1 0 G 39948 Dialister 0.09 1 1 S 487173 Dialister succinatiphilus 0.09 1 0 O 909929 Selenomonadales 0.09 1 0 F 1843490 Sporomusaceae 0.09 1 0 G 81463 Anaeromusa 0.09 1 0 G1 673272 environmental samples 0.09 1 1 S 673273 uncultured Anaeromusa sp. 4.06 43 0 P 201174 Actinomycetota 3.78 40 0 C 1760 Actinomycetes 1.13 12 0 O 85007 Mycobacteriales 0.94 10 0 F 1653 Corynebacteriaceae 0.94 10 4 G 1716 Corynebacterium 0.19 2 2 S 679663 Corynebacterium canis 0.09 1 1 S 38289 Corynebacterium jeikeium 0.09 1 1 S 43771 Corynebacterium urealyticum 0.09 1 1 S 1758466 Corynebacterium faecale 0.09 1 1 S 35757 Corynebacterium cystitidis 0.09 1 0 F 85025 Nocardiaceae 0.09 1 1 G 1817 Nocardia 0.09 1 0 F 2805586 Lawsonellaceae 0.09 1 0 G 1847725 Lawsonella 0.09 1 1 S 1528099 Lawsonella clevelandensis 0.94 10 1 O 85006 Micrococcales 0.66 7 0 F 1268 Micrococcaceae 0.66 7 3 G 32207 Rothia 0.19 2 2 S 2047 Rothia dentocariosa 0.19 2 2 S 172042 Rothia aeria 0.19 2 0 F 85023 Microbacteriaceae 0.09 1 0 G 33882 Microbacterium 0.09 1 1 S 936337 Microbacterium amylolyticum 0.09 1 0 F1 1655488 Luna cluster 0.09 1 1 F2 1655489 Luna-1 subcluster 0.94 10 2 O 85009 Propionibacteriales 0.76 8 2 F 31957 Propionibacteriaceae 0.47 5 0 G 1912216 Cutibacterium 0.19 2 2 S 1747 Cutibacterium acnes 0.19 2 2 S 2559073 Cutibacterium modestum 0.09 1 1 S 33011 Cutibacterium granulosum 0.09 1 0 G 29404 Microlunatus 0.09 1 1 S 630515 Microlunatus soli 0.28 3 0 O 2037 Actinomycetales 0.28 3 2 F 2049 Actinomycetaceae 0.09 1 0 G 1654 Actinomyces 0.09 1 0 G1 2609248 unclassified Actinomyces 0.09 1 1 S 712122 Actinomyces sp. oral taxon 414 0.19 2 0 O 85004 Bifidobacteriales 0.19 2 0 F 31953 Bifidobacteriaceae 0.19 2 0 G 1678 Bifidobacterium 0.19 2 0 S 216816 Bifidobacterium longum 0.19 2 2 S1 1682 Bifidobacterium longum subsp. infantis 0.19 2 0 O 85011 Kitasatosporales 0.19 2 0 F 2062 Streptomycetaceae 0.19 2 0 G 1883 Streptomyces 0.19 2 0 G1 2593676 unclassified Streptomyces 0.09 1 1 S 2933779 Streptomyces sp. WAC00303 0.09 1 1 S 2975870 Streptomyces sp. NBC_01498 0.09 1 0 O 1643682 Geodermatophilales 0.09 1 0 F 85030 Geodermatophilaceae 0.09 1 0 G 1860 Geodermatophilus 0.09 1 0 S 1861 Geodermatophilus obscurus 0.09 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.19 2 0 C 84992 Acidimicrobiia 0.19 2 0 O 84993 Acidimicrobiales 0.19 2 0 F 633392 Iamiaceae 0.09 1 0 G 467975 Iamia 0.09 1 1 S 467976 Iamia majanohamensis 0.09 1 0 G 3075137 Dermatobacter 0.09 1 1 S 2884263 Dermatobacter hominis 0.09 1 0 C 908620 Nitriliruptoria 0.09 1 0 O 1755823 Egicoccales 0.09 1 0 F 1755824 Egicoccaceae 0.09 1 0 G 1755825 Egicoccus 0.09 1 1 S 1670830 Egicoccus halophilus 0.57 6 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.57 6 0 P 1117 Cyanobacteriota 0.57 6 2 C 3028117 Cyanophyceae 0.09 1 0 O 307595 Gloeobacterales 0.09 1 0 F 3079741 Anthocerotibacteraceae 0.09 1 0 G 2857076 Anthocerotibacter 0.09 1 0 S 2857077 Anthocerotibacter panamensis 0.09 1 1 S1 2778476 Anthocerotibacter panamensis C109 0.09 1 0 C1 1301283 Oscillatoriophycideae 0.09 1 0 O 1118 Chroococcales 0.09 1 0 F 1890449 Microcystaceae 0.09 1 0 G 1125 Microcystis 0.09 1 0 G1 2643300 unclassified Microcystis 0.09 1 1 S 1967666 Microcystis sp. MC19 0.09 1 0 O 1890424 Synechococcales 0.09 1 0 F 1890426 Synechococcaceae 0.09 1 0 G 1129 Synechococcus 0.09 1 1 S 32046 Synechococcus elongatus 0.09 1 0 O 1890505 Chroococcidiopsidales 0.09 1 0 F 1890528 Chroococcidiopsidaceae 0.09 1 1 G 54298 Chroococcidiopsis 0.28 3 2 P 544448 Mycoplasmatota 0.09 1 0 C 31969 Mollicutes 0.09 1 0 O 2085 Mycoplasmatales 0.09 1 0 F 2092 Mycoplasmataceae 0.09 1 0 G 2093 Mycoplasma 0.09 1 0 G1 656088 Mycoplasma mycoides group 0.09 1 1 S 1179777 Mycoplasma feriruminatoris 0.09 1 0 P 67819 Armatimonadota 0.09 1 0 C 1077257 Chthonomonadia 0.09 1 0 O 1077263 Chthonomonadales 0.09 1 0 F 1077264 Chthonomonadaceae 0.09 1 0 G 1077265 Chthonomonas 0.09 1 0 S 454171 Chthonomonas calidirosea 0.09 1 1 S1 1303518 Chthonomonas calidirosea T49 0.47 5 0 P 200940 Thermodesulfobacteriota 0.28 3 0 C 3031651 Desulfuromonadia 0.28 3 0 O 69541 Desulfuromonadales 0.28 3 0 F 213421 Desulfuromonadaceae 0.28 3 3 G 890 Desulfuromonas 0.09 1 0 C 67799 Thermodesulfobacteria 0.09 1 0 O 188710 Thermodesulfobacteriales 0.09 1 0 F 188711 Thermodesulfobacteriaceae 0.09 1 0 G 2033601 Thermosulfuriphilus 0.09 1 1 S 1936021 Thermosulfuriphilus ammonigenes 0.09 1 0 C 3031449 Desulfovibrionia 0.09 1 0 O 213115 Desulfovibrionales 0.09 1 0 F 194924 Desulfovibrionaceae 0.09 1 0 G 2910978 Megalodesulfovibrio 0.09 1 0 S 879 Megalodesulfovibrio gigas 0.09 1 1 S1 1121448 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 0.47 5 0 D1 1783270 FCB group 0.47 5 0 D2 68336 Bacteroidota/Chlorobiota group 0.47 5 0 P 976 Bacteroidota 0.47 5 0 C 768503 Cytophagia 0.47 5 0 O 768507 Cytophagales 0.47 5 0 F 89373 Cytophagaceae 0.47 5 0 G 107 Spirosoma 0.47 5 5 S 2666025 Spirosoma endbachense 0.19 2 0 P 32066 Fusobacteriota 0.19 2 0 C 203490 Fusobacteriia 0.19 2 0 O 203491 Fusobacteriales 0.09 1 0 F 203492 Fusobacteriaceae 0.09 1 0 G 848 Fusobacterium 0.09 1 1 S 76859 Fusobacterium animalis 0.09 1 0 F 1129771 Leptotrichiaceae 0.09 1 0 G 32067 Leptotrichia 0.09 1 1 S 157687 Leptotrichia wadei 0.09 1 0 P 29547 Campylobacterota 0.09 1 0 C 3031852 Epsilonproteobacteria 0.09 1 0 O 213849 Campylobacterales 0.09 1 0 F 72293 Helicobacteraceae 0.09 1 0 G 209 Helicobacter 0.09 1 1 S 213 Helicobacter cinaedi 0.09 1 0 P 2818505 Myxococcota 0.09 1 0 P1 3031711 Polyangia 0.09 1 0 O 3031712 Polyangiales 0.09 1 0 F 1524216 Labilitrichaceae 0.09 1 0 G 1524217 Labilithrix 0.09 1 1 S 1391654 Labilithrix luteola 0.09 1 0 P 74152 Elusimicrobiota 0.09 1 0 C 641853 Elusimicrobia 0.09 1 0 O 641854 Elusimicrobiales 0.09 1 0 F 641876 Elusimicrobiaceae 0.09 1 0 G 423604 Elusimicrobium 0.09 1 0 S 423605 Elusimicrobium minutum 0.09 1 1 S1 445932 Elusimicrobium minutum Pei191