0.81 725 725 U 0 unclassified 99.19 89063 4 R 1 root 99.19 89058 0 R1 131567 cellular organisms 99.19 89058 25110 D 2 Bacteria 54.11 48587 463 P 1224 Pseudomonadota 49.63 44566 2890 C 1236 Gammaproteobacteria 38.92 34949 2541 O 91347 Enterobacterales 32.51 29189 3297 F 543 Enterobacteriaceae 16.07 14426 299 G 561 Escherichia 15.57 13976 13007 S 562 Escherichia coli 0.27 238 238 S1 316435 Escherichia coli Nissle 1917 0.23 206 24 S1 83334 Escherichia coli O157:H7 0.19 169 169 S2 155864 Escherichia coli O157:H7 str. EDL933 0.01 9 9 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 4 4 S2 1328859 Escherichia coli O157:H7 str. SS17 0.14 127 127 S1 2079157 Escherichia coli O2:H1 0.09 84 84 S1 1322345 Escherichia coli ATCC 25922 0.09 81 81 S1 1446600 Escherichia coli O15:H18 0.07 64 64 S1 2874053 Escherichia coli O25:H1 0.07 62 62 S1 331112 Escherichia coli HS 0.06 55 55 S1 655817 Escherichia coli ABU 83972 0.03 23 23 S1 244320 Escherichia coli O55:H7 0.01 12 12 S1 362663 Escherichia coli 536 0.01 7 0 S1 1038927 Escherichia coli O104:H4 0.01 7 7 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 4 4 S1 376725 Escherichia coli O103:H2 0.00 4 4 S1 439855 Escherichia coli SMS-3-5 0.00 1 1 S1 1392858 Escherichia coli M12 0.00 1 1 S1 595495 Escherichia coli KO11FL 0.08 76 76 S 1499973 Escherichia marmotae 0.07 63 63 S 208962 Escherichia albertii 0.01 12 12 S 564 Escherichia fergusonii 4.97 4463 103 G 590 Salmonella 4.74 4252 993 S 28901 Salmonella enterica 3.63 3259 155 S1 59201 Salmonella enterica subsp. enterica 1.08 968 968 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.77 687 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.70 630 630 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.05 41 41 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.02 16 16 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.40 359 359 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.38 344 16 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.36 322 322 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 6 6 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.25 226 226 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.25 221 221 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.13 118 87 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.02 19 19 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.01 12 12 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.05 49 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.05 49 49 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.04 34 33 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 1 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.04 32 32 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.02 21 21 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.02 18 4 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.02 14 14 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.01 6 6 S2 29474 Salmonella enterica subsp. enterica serovar California 0.01 5 5 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 4 4 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 3 3 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 2 2 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 2 2 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 2 2 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 192954 Salmonella enterica subsp. enterica serovar Mbandaka 0.12 108 0 S 54736 Salmonella bongori 0.12 108 108 S1 1299282 Salmonella bongori CFSAN000510 3.91 3511 1 G 547 Enterobacter 3.88 3487 3 G1 354276 Enterobacter cloacae complex 2.72 2438 2438 S 299767 Enterobacter ludwigii 0.92 830 808 S 158836 Enterobacter hormaechei 0.02 22 22 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.09 80 12 S 550 Enterobacter cloacae 0.08 68 68 S1 336306 Enterobacter cloacae subsp. cloacae 0.06 56 56 S 208224 Enterobacter kobei 0.06 50 50 S 61645 Enterobacter asburiae 0.03 27 27 S 1812935 Enterobacter roggenkampii 0.00 2 2 S 3029761 Enterobacter pasteurii 0.00 1 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.02 22 22 S 881260 Enterobacter bugandensis 0.00 1 0 G1 2608935 unclassified Enterobacter 0.00 1 1 S 2870346 Enterobacter sp. C2 1.73 1551 0 F1 2890311 Klebsiella/Raoultella group 1.71 1535 31 G 570 Klebsiella 1.37 1229 1051 S 573 Klebsiella pneumoniae 0.10 89 88 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.10 89 89 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.10 87 15 S 1463165 Klebsiella quasipneumoniae 0.08 72 72 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.06 51 16 S 244366 Klebsiella variicola 0.04 35 35 S1 640131 Klebsiella variicola At-22 0.05 45 45 S 548 Klebsiella aerogenes 0.04 35 35 S 1134687 Klebsiella michiganensis 0.04 35 0 G1 2608929 unclassified Klebsiella 0.02 19 19 S 2851540 Klebsiella sp. PL-2018 0.02 16 16 S 2829835 Klebsiella sp. P1954 0.01 11 11 S 2153354 Klebsiella huaxiensis 0.01 10 10 S 1259973 Klebsiella electrica 0.00 1 1 S 571 Klebsiella oxytoca 0.02 16 0 G 160674 Raoultella 0.02 16 16 S 54291 Raoultella ornithinolytica 0.42 373 4 G 544 Citrobacter 0.33 295 0 G1 1344959 Citrobacter freundii complex 0.16 143 143 S 1639133 Citrobacter portucalensis 0.11 97 97 S 67828 Citrobacter gillenii 0.03 28 28 S 546 Citrobacter freundii 0.03 25 0 G2 2816438 unclassified Citrobacter freundii complex 0.03 25 25 S 1686385 Citrobacter sp. BIDMC108 0.00 2 2 S 67827 Citrobacter werkmanii 0.04 40 0 S 35703 Citrobacter amalonaticus 0.04 40 40 S1 1261127 Citrobacter amalonaticus Y19 0.04 34 34 S 2971264 Citrobacter enshiensis 0.39 347 2 G 620 Shigella 0.37 336 336 S 623 Shigella flexneri 0.01 9 9 S 621 Shigella boydii 0.29 261 41 F1 36866 unclassified Enterobacteriaceae 0.12 110 110 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.11 95 95 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 12 12 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 1 1 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.00 1 1 S 2675782 Enterobacteriaceae endosymbiont of Donacia proxima 0.00 1 1 S 2675786 Enterobacteriaceae endosymbiont of Donacia thalassina 0.29 257 0 F1 191675 Enterobacteriaceae incertae sedis 0.29 257 4 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.20 183 0 F3 84564 ant endosymbionts 0.11 100 0 G 1699619 Candidatus Westeberhardia 0.11 100 100 S 1594731 Candidatus Westeberhardia cardiocondylae 0.09 83 3 G 203804 Candidatus Blochmanniella 0.07 63 30 G1 711328 unclassified Candidatus Blochmanniella 0.04 32 32 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.01 6 6 S 251538 Candidatus Blochmannia ocreatus 0.01 6 6 S 251540 Candidatus Blochmannia vicinus 0.01 5 0 S 251535 Candidatus Blochmanniella vafra 0.01 5 5 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.05 41 0 F3 146507 aphid secondary symbionts 0.02 22 22 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.01 9 0 G 568988 Candidatus Regiella 0.01 9 0 G1 3077955 unclassified Candidatus Regiella 0.01 9 9 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.01 8 8 G 568987 Candidatus Hamiltonella 0.00 2 2 S 134287 secondary endosymbiont of Heteropsylla cubana 0.02 18 0 G 1302410 Candidatus Annandia 0.02 18 18 S 1302411 Candidatus Annandia adelgestsuga 0.01 7 0 G 1906660 Candidatus Mikella 0.01 7 7 S 1778264 Candidatus Mikella endobia 0.00 1 0 G 801 Symbiopectobacterium 0.00 1 1 S 2871826 Symbiopectobacterium purcellii 0.00 1 0 G 472825 Candidatus Purcelliella 0.00 1 1 S 472834 Candidatus Purcelliella pentastirinorum 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.22 199 0 G 1330547 Kosakonia 0.20 183 183 S 208223 Kosakonia cowanii 0.02 15 15 S 283686 Kosakonia radicincitans 0.00 1 1 S 1646340 Kosakonia pseudosacchari 0.20 179 0 G 2815296 Jejubacter 0.20 179 179 S 2579935 Jejubacter calystegiae 0.09 82 0 G 409304 Candidatus Ishikawella 0.09 82 0 S 168169 Candidatus Ishikawella capsulata 0.09 82 82 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.08 72 0 G 1330545 Lelliottia 0.08 72 72 S 61646 Lelliottia amnigena 0.06 53 0 G 1048757 Candidatus Moranella 0.06 53 53 S 1048758 Candidatus Moranella endobia 0.04 40 0 G 1177214 Candidatus Profftia 0.04 37 0 G1 2735709 unclassified Candidatus Profftia 0.04 37 37 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 3 3 S 1987921 Candidatus Profftia lariciata 0.03 31 0 G 2303321 Superficieibacter 0.03 31 0 G1 2645744 unclassified Superficieibacter 0.03 31 31 S 3031919 Superficieibacter sp. HKU1 0.02 20 0 G 2726810 Scandinavium 0.02 20 20 S 1851514 Scandinavium goeteborgense 0.01 9 0 G 1335483 Shimwellia 0.01 9 9 S 563 Shimwellia blattae 0.01 9 0 G 702 Plesiomonas 0.01 9 9 S 703 Plesiomonas shigelloides 0.00 2 0 G 1081630 Candidatus Schneideria 0.00 2 2 S 1081631 Candidatus Schneideria nysicola 0.00 2 0 G 401618 Candidatus Riesia 0.00 2 2 S 401619 Candidatus Riesia pediculicola 0.00 2 2 G 158483 Cedecea 0.00 2 0 G 83654 Leclercia 0.00 2 2 S 83655 Leclercia adecarboxylata 0.00 1 0 G 158851 Trabulsiella 0.00 1 1 S 379893 Trabulsiella odontotermitis 1.40 1255 0 F 2812006 Bruguierivoracaceae 1.40 1255 0 G 84565 Sodalis 1.08 967 967 S 2697027 Sodalis ligni 0.29 261 0 S 1486991 Candidatus Sodalis pierantonius 0.29 261 261 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.02 21 0 G1 2636512 unclassified Sodalis 0.02 21 21 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.01 6 6 S 1239307 Sodalis praecaptivus 0.77 689 3 F 1903411 Yersiniaceae 0.45 401 0 G 613 Serratia 0.27 244 244 S 138074 Serratia symbiotica 0.08 71 71 S 614 Serratia liquefaciens 0.06 52 52 S 61652 Serratia rubidaea 0.03 23 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.03 23 23 S 2785630 Serratia sp. CMO1 0.01 11 0 S 82996 Serratia plymuthica 0.01 11 11 S1 1006598 Serratia plymuthica RVH1 0.28 252 0 G 629 Yersinia 0.25 220 0 G1 1649845 Yersinia pseudotuberculosis complex 0.25 220 11 S 632 Yersinia pestis 0.20 176 176 S1 748678 Yersinia pestis str. Pestoides B 0.02 18 18 S1 360102 Yersinia pestis Antiqua 0.01 9 9 S1 649716 Yersinia pestis Pestoides G 0.01 6 6 S1 1345701 Yersinia pestis 790 0.03 31 31 S 935293 Yersinia entomophaga 0.00 1 0 S 630 Yersinia enterocolitica 0.00 1 0 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 1 1 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.03 29 29 G 1927833 Candidatus Fukatsuia 0.00 2 0 G 34037 Rahnella 0.00 2 2 S 2816248 Rahnella bonaserana 0.00 1 0 G 929812 Gibbsiella 0.00 1 1 S 929813 Gibbsiella quercinecans 0.00 1 0 G 1745211 Chania 0.00 1 0 S 1639108 Chania multitudinisentens 0.00 1 1 S1 1441930 Chania multitudinisentens RB-25 0.59 534 28 F 1903409 Erwiniaceae 0.44 392 0 G 551 Erwinia 0.36 325 325 S 1922217 Candidatus Erwinia haradaeae 0.07 65 0 G1 2622719 unclassified Erwinia 0.07 65 65 S 215689 Erwinia sp. Ejp617 0.00 2 2 S 65700 Erwinia tracheiphila 0.08 69 2 G 53335 Pantoea 0.04 33 33 S 1235990 Candidatus Pantoea carbekii 0.03 24 24 S 59814 Pantoea dispersa 0.00 4 4 S 66269 Pantoea stewartii 0.00 3 3 S 470931 Pantoea anthophila 0.00 1 1 G1 2630326 unclassified Pantoea 0.00 1 1 S 2364647 Pantoea piersonii 0.00 1 1 S 553 Pantoea ananatis 0.04 34 0 G 32199 Buchnera 0.04 34 16 S 9 Buchnera aphidicola 0.01 6 6 S1 1241860 Buchnera aphidicola (Hyperomyzus lactucae) 0.01 6 6 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 3 3 S1 1241868 Buchnera aphidicola (Mollitrichosiphum nigrofasciatum) 0.00 3 3 S1 1965431 Buchnera aphidicola (Ceratoglyphina bambusae) 0.01 8 0 G 2997349 Winslowiella 0.01 8 8 S 92490 Winslowiella toletana 0.00 2 0 G 51228 Wigglesworthia 0.00 2 0 S 51229 Wigglesworthia glossinidia 0.00 2 0 S1 36868 Wigglesworthia glossinidia endosymbiont of Glossina morsitans 0.00 2 2 S2 1142511 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 0.00 1 0 G 3026546 Duffyella 0.00 1 1 S 1619313 Duffyella gerundensis 0.43 385 17 F 1903414 Morganellaceae 0.14 125 0 G 581 Morganella 0.14 125 102 S 582 Morganella morganii 0.03 23 23 S1 180434 Morganella morganii subsp. morganii 0.11 101 22 G 637 Arsenophonus 0.05 43 43 S 638 Arsenophonus nasoniae 0.03 28 0 G1 2627083 unclassified Arsenophonus 0.02 20 20 S 3041619 Arsenophonus sp. aPb 0.01 7 7 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 1 1 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.01 8 8 S 634113 Candidatus Arsenophonus lipoptenae 0.07 67 0 G 583 Proteus 0.07 67 67 S 584 Proteus mirabilis 0.03 31 1 G 626 Xenorhabdus 0.02 19 0 S 40577 Xenorhabdus poinarii 0.02 19 19 S1 1354304 Xenorhabdus poinarii G6 0.01 8 8 S 290110 Xenorhabdus budapestensis 0.00 3 3 S 351671 Xenorhabdus doucetiae 0.03 27 23 G 29487 Photorhabdus 0.00 3 0 S 2218628 Photorhabdus laumondii 0.00 3 3 S1 141679 Photorhabdus laumondii subsp. laumondii 0.00 1 1 S 171438 Photorhabdus akhurstii 0.02 17 0 G 586 Providencia 0.01 11 0 S 516075 Providencia sneebia 0.01 11 11 S1 1141660 Providencia sneebia DSM 19967 0.01 6 6 S 1715285 Candidatus Providencia siddallii 0.28 249 0 F 1903410 Pectobacteriaceae 0.14 125 0 G 122277 Pectobacterium 0.07 64 46 S 1905730 Pectobacterium parmentieri 0.02 18 18 S1 561231 Pectobacterium parmentieri WPP163 0.05 43 43 S 2488639 Pectobacterium versatile 0.01 6 0 G1 2627739 unclassified Pectobacterium 0.01 6 6 S 2738983 Pectobacterium sp. PL64 0.01 6 6 S 2485124 Pectobacterium polonicum 0.01 5 5 S 180957 Pectobacterium brasiliense 0.00 1 1 S 78398 Pectobacterium odoriferum 0.14 123 38 G 204037 Dickeya 0.06 55 55 S 1089444 Dickeya solani 0.02 22 22 S 1778540 Dickeya fangzhongdai 0.01 5 1 S 204038 Dickeya dadantii 0.00 4 4 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 3 3 S 204042 Dickeya zeae 0.00 1 0 G 71655 Brenneria 0.00 1 1 S 2722756 Brenneria izadpanahii 0.10 86 0 F 1903412 Hafniaceae 0.10 86 83 G 635 Edwardsiella 0.00 3 3 S 636 Edwardsiella tarda 0.02 20 0 F 3120698 Gallaecimonadaceae 0.02 20 0 G 745410 Gallaecimonas 0.02 20 20 S 3029055 Gallaecimonas kandeliae 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 2172100 Limnobaculum 0.00 1 1 S 2498113 Limnobaculum zhutongyuii 1.87 1675 0 O 135625 Pasteurellales 1.87 1675 11 F 712 Pasteurellaceae 1.81 1622 0 G 713 Actinobacillus 1.76 1583 0 S 718 Actinobacillus equuli 1.76 1583 1583 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.04 39 39 S 157339 Actinobacillus arthritidis 0.02 17 0 G 745 Pasteurella 0.02 16 16 S 747 Pasteurella multocida 0.00 1 1 S 2827233 Pasteurella atlantica 0.01 13 0 G 2899790 Mergibacter 0.01 13 13 S 221402 Mergibacter septicus 0.01 6 0 G 75984 Mannheimia 0.00 3 3 S 75985 Mannheimia haemolytica 0.00 2 2 S 85402 Mannheimia granulomatis 0.00 1 1 S 85404 Mannheimia varigena 0.00 4 0 G 155493 Gallibacterium 0.00 4 4 S 750 Gallibacterium anatis 0.00 2 0 G 724 Haemophilus 0.00 2 2 S 729 Haemophilus parainfluenzae 1.34 1201 0 O 135623 Vibrionales 1.34 1201 137 F 641 Vibrionaceae 1.01 906 16 G 662 Vibrio 0.66 592 0 S 52443 Vibrio tapetis 0.66 592 592 S1 1671868 Vibrio tapetis subsp. tapetis 0.14 123 123 S 666 Vibrio cholerae 0.07 60 4 G1 2614977 unclassified Vibrio 0.05 44 44 S 2661921 Vibrio sp. THAF191c 0.01 7 7 S 2661922 Vibrio sp. THAF191d 0.00 2 2 S 2819099 Vibrio sp. SCSIO 43155 0.00 2 2 S 2589990 Vibrio sp. Scap24 0.00 1 1 S 2819103 Vibrio sp. SCSIO 43009 0.05 43 0 G1 717610 Vibrio harveyi group 0.04 38 38 S 670 Vibrio parahaemolyticus 0.00 4 4 S 669 Vibrio harveyi 0.00 1 0 G2 2315253 Vibrio diabolicus subgroup 0.00 1 1 S 50719 Vibrio diabolicus 0.04 37 37 S 2572923 Vibrio taketomensis 0.01 11 2 S 672 Vibrio vulnificus 0.01 9 9 S1 914127 Vibrio vulnificus MO6-24/O 0.01 11 0 G1 87806 environmental samples 0.01 11 11 S 114054 uncultured Vibrio sp. 0.00 4 4 S 104609 Vibrio penaeicida 0.00 4 4 S 29495 Vibrio navarrensis 0.00 3 3 S 674 Vibrio mimicus 0.00 1 0 G1 1891919 Vibrio oreintalis group 0.00 1 1 S 29498 Vibrio tubiashii 0.00 1 0 S 55601 Vibrio anguillarum 0.00 1 1 S1 42323 Vibrio anguillarum serovar O1 0.17 152 0 G 657 Photobacterium 0.12 106 22 S 553611 Photobacterium leiognathi 0.09 84 84 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.05 46 0 S 38293 Photobacterium damselae 0.04 33 33 S1 38294 Photobacterium damselae subsp. piscicida 0.01 13 13 S1 85581 Photobacterium damselae subsp. damselae 0.01 5 0 G 511678 Aliivibrio 0.01 5 0 S 40269 Aliivibrio salmonicida 0.01 5 5 S1 316275 Aliivibrio salmonicida LFI1238 0.00 1 0 G 2042066 Paraphotobacterium 0.00 1 1 S 1755811 Paraphotobacterium marinum 1.13 1013 0 O 135624 Aeromonadales 1.13 1013 117 F 84642 Aeromonadaceae 0.64 579 9 G 642 Aeromonas 0.48 431 431 S 654 Aeromonas veronii 0.08 75 75 S 652 Aeromonas schubertii 0.05 49 0 G1 257493 unclassified Aeromonas 0.05 47 47 S 2560029 Aeromonas sp. 2692-1 0.00 2 2 S 2920537 Aeromonas sp. 19NY04SH05-1 0.01 6 6 S 645 Aeromonas salmonicida 0.01 6 6 S 648 Aeromonas caviae 0.00 2 0 S 651 Aeromonas media 0.00 2 2 S1 1208104 Aeromonas media WS 0.00 1 1 S 644 Aeromonas hydrophila 0.31 282 0 G 225143 Oceanisphaera 0.31 282 282 S 1903694 Oceanisphaera avium 0.04 32 1 G 43947 Tolumonas 0.03 30 30 S 43948 Tolumonas auensis 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 2 0 G 2802288 Dongshaea 0.00 2 2 S 2047966 Dongshaea marina 0.00 1 0 G 347533 Zobellella 0.00 1 1 S 347534 Zobellella denitrificans 0.81 727 0 O 2887326 Moraxellales 0.81 727 24 F 468 Moraxellaceae 0.66 593 54 G 469 Acinetobacter 0.56 507 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.40 355 355 S 470 Acinetobacter baumannii 0.17 150 149 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.00 2 2 S 471 Acinetobacter calcoaceticus 0.01 13 13 S 202956 Acinetobacter towneri 0.01 13 11 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2929509 Acinetobacter sp. NyZ410 0.00 1 1 S 2983215 Acinetobacter sp. ESL0695 0.01 5 5 S 40214 Acinetobacter johnsonii 0.00 1 1 S 29430 Acinetobacter haemolyticus 0.11 97 43 G 475 Moraxella 0.06 50 50 S 2904120 Moraxella nasibovis 0.00 2 2 S 2904119 Moraxella haemolytica 0.00 1 1 S 29433 Moraxella ovis 0.00 1 1 S 90241 Moraxella lincolnii 0.01 13 5 G 497 Psychrobacter 0.01 7 6 G1 196806 unclassified Psychrobacter 0.00 1 1 S 3064892 Psychrobacter sp. van23A 0.00 1 1 S 256326 Psychrobacter arenosus 0.53 473 0 O 72274 Pseudomonadales 0.52 463 6 F 135621 Pseudomonadaceae 0.50 445 63 G 286 Pseudomonas 0.14 129 0 G1 136841 Pseudomonas aeruginosa group 0.14 128 128 S 287 Pseudomonas aeruginosa 0.00 1 0 G2 1232139 Pseudomonas oleovorans/pseudoalcaligenes group 0.00 1 1 S 1149133 Pseudomonas furukawaii 0.13 113 1 G1 136845 Pseudomonas putida group 0.12 110 110 S 303 Pseudomonas putida 0.00 2 2 S 78327 Pseudomonas mosselii 0.11 97 1 G1 196821 unclassified Pseudomonas 0.10 88 88 S 2025658 Pseudomonas sp. NS1(2017) 0.00 2 2 S 2954086 Pseudomonas sp. FP2196 0.00 2 2 S 2559074 Pseudomonas sp. S150 0.00 1 1 S 1173283 Pseudomonas sp. R3-18-08 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2931382 Pseudomonas sp. PIA16 0.02 20 0 G1 136843 Pseudomonas fluorescens group 0.02 17 0 S 47883 Pseudomonas synxantha 0.02 17 17 S1 96901 Pseudomonas synxantha BG33R 0.00 3 3 S 47878 Pseudomonas azotoformans 0.01 10 10 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 3 3 S 158627 Pseudomonas graminis 0.00 2 2 S 2316085 Pseudomonas bubulae 0.00 2 2 S 2738125 Pseudomonas hefeiensis 0.00 2 2 S 437900 Pseudomonas marincola 0.00 1 1 S 321846 Pseudomonas simiae 0.00 1 0 G1 136849 Pseudomonas syringae group 0.00 1 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 1 0 S 317 Pseudomonas syringae 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 1 1 S 364197 Pseudomonas pohangensis 0.00 1 1 S 2599595 Pseudomonas eucalypticola 0.01 8 0 G 2901164 Stutzerimonas 0.01 8 0 G1 136846 Stutzerimonas stutzeri group 0.01 8 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 8 8 S 316 Stutzerimonas stutzeri 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 G 2901189 Halopseudomonas 0.00 1 1 S 797277 Halopseudomonas litoralis 0.01 10 0 F 2887365 Marinobacteraceae 0.01 10 10 G 2742 Marinobacter 0.50 453 6 O 135622 Alteromonadales 0.24 214 1 F 72275 Alteromonadaceae 0.23 205 0 F1 2903219 Alteromonas/Salinimonas group 0.23 205 0 G 226 Alteromonas 0.23 205 0 G1 2614992 unclassified Alteromonas 0.23 205 205 S 2267264 Alteromonas sp. RKMC-009 0.01 5 4 G 261825 Agarivorans 0.00 1 0 G1 2636026 unclassified Agarivorans 0.00 1 1 S 2937286 Agarivorans sp. TSD2052 0.00 2 2 G 1172191 Catenovulum 0.00 1 0 G 2894574 Saccharobesus 0.00 1 1 S 2172099 Saccharobesus litoralis 0.21 187 0 F 267890 Shewanellaceae 0.21 186 33 G 22 Shewanella 0.08 73 73 S 62322 Shewanella baltica 0.04 38 38 S 712036 Shewanella dokdonensis 0.03 27 27 S 2018305 Shewanella bicestrii 0.01 13 10 G1 196818 unclassified Shewanella 0.00 2 2 S 2601269 Shewanella sp. YLB-09 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 1 1 S 1028752 Shewanella aestuarii 0.00 1 1 S 24 Shewanella putrefaciens 0.00 1 0 G 2547964 Parashewanella 0.00 1 1 S 342950 Parashewanella spongiae 0.04 38 0 F 267888 Pseudoalteromonadaceae 0.02 21 0 G 53246 Pseudoalteromonas 0.02 21 0 G1 194690 unclassified Pseudoalteromonas 0.02 19 19 S 2785910 Pseudoalteromonas sp. A41-2 0.00 2 2 S 649161 Pseudoalteromonas sp. 3J6 0.02 15 0 G 2834759 Flocculibacter 0.02 15 15 S 2744479 Flocculibacter collagenilyticus 0.00 2 2 G 907197 Psychrosphaera 0.01 6 0 F 267891 Moritellaceae 0.01 6 0 G 58050 Moritella 0.01 6 0 S 90736 Moritella marina 0.01 6 6 S1 1202962 Moritella marina ATCC 15381 0.00 2 0 F 267889 Colwelliaceae 0.00 1 1 G 28228 Colwellia 0.00 1 0 G 1518149 Thalassotalea 0.00 1 0 G1 2614972 unclassified Thalassotalea 0.00 1 1 S 2769490 Thalassotalea sp. LPB0316 0.45 402 0 C1 118884 Gammaproteobacteria incertae sedis 0.44 392 0 G 1076625 Candidatus Steffania 0.44 392 392 S 1076626 Candidatus Steffania adelgidicola 0.01 5 0 G 198346 Candidatus Palibaumannia 0.01 5 4 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 1 1 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.00 3 0 F 412032 Celerinatantimonadaceae 0.00 3 0 G 412033 Celerinatantimonas 0.00 3 3 S 412034 Celerinatantimonas diazotrophica 0.00 1 0 C2 32036 sulfur-oxidizing symbionts 0.00 1 0 G 2686004 Candidatus Vondammii 0.00 1 0 G1 2687300 unclassified Candidatus Vondammii 0.00 1 1 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 1 0 G 2738850 Candidatus Reidiella 0.00 1 1 S 2738883 Candidatus Reidiella endopervernicosa 0.22 202 0 O 135613 Chromatiales 0.21 190 1 F 1046 Chromatiaceae 0.11 100 3 G 85072 Allochromatium 0.11 97 97 S 553982 Allochromatium tepidum 0.04 40 0 G 156885 Thioflavicoccus 0.04 40 0 S 80679 Thioflavicoccus mobilis 0.04 40 40 S1 765912 Thioflavicoccus mobilis 8321 0.02 19 19 G 1056 Thiocapsa 0.01 10 9 G 61593 Thiorhodovibrio 0.00 1 1 S 77007 Thiorhodovibrio winogradskyi 0.01 10 1 G 67575 Rheinheimera 0.01 9 0 G1 115860 unclassified Rheinheimera 0.01 9 9 S 3072790 Rheinheimera sp. MMS21-TC3 0.01 7 0 G 2828366 Caldichromatium 0.01 7 7 S 2699430 Caldichromatium japonicum 0.00 2 2 G 1227 Nitrosococcus 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.01 11 0 F 72276 Ectothiorhodospiraceae 0.01 9 1 G 1335745 Spiribacter 0.00 4 4 S 2182432 Spiribacter halobius 0.00 4 0 G1 2629425 unclassified Spiribacter 0.00 4 4 S 2666185 Spiribacter sp. 2438 0.00 1 0 G 133193 Alkalilimnicola 0.00 1 0 S 351052 Alkalilimnicola ehrlichii 0.00 1 1 S1 187272 Alkalilimnicola ehrlichii MLHE-1 0.00 1 0 G 1765964 Acidihalobacter 0.00 1 1 S 2792603 Acidihalobacter aeolianus 0.00 1 0 F 2035710 Thioalkalibacteraceae 0.00 1 0 G 2035712 Guyparkeria 0.00 1 1 S 47960 Guyparkeria halophila 0.22 200 1 O 135619 Oceanospirillales 0.18 164 1 F 135620 Oceanospirillaceae 0.11 99 0 G 459520 Neptuniibacter 0.11 99 99 S 651666 Neptuniibacter halophilus 0.05 42 0 G 28253 Marinomonas 0.05 41 41 S 2773454 Marinomonas algicola 0.00 1 1 S 119864 Marinomonas mediterranea 0.02 21 21 G 515417 Amphritea 0.00 1 0 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.02 17 0 F 28256 Halomonadaceae 0.01 10 0 F1 114403 Zymobacter group 0.01 9 0 G 235572 Candidatus Portiera 0.01 9 9 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.00 4 4 G 404432 Salinicola 0.00 2 0 G 3137761 Billgrantia 0.00 2 2 S 2497861 Billgrantia tianxiuensis 0.00 1 0 G 2745 Halomonas 0.00 1 1 S 115561 Halomonas hydrothermalis 0.02 16 0 F 2823145 Pleioneaceae 0.02 16 0 G 1502941 Pleionea 0.02 16 16 S 3070815 Pleionea litopenaei 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 1 G 3020832 Alloalcanivorax 0.00 1 0 F 2898533 Zooshikellaceae 0.00 1 0 G 2768738 Spartinivicinus 0.00 1 1 S 2683272 Spartinivicinus ruber 0.17 152 2 O 135614 Lysobacterales 0.16 147 4 F 32033 Lysobacteraceae 0.14 122 0 G 338 Xanthomonas 0.14 122 122 S 29447 Xanthomonas albilineans 0.01 9 0 G 83618 Pseudoxanthomonas 0.01 8 0 S 314722 Pseudoxanthomonas suwonensis 0.01 8 8 S1 743721 Pseudoxanthomonas suwonensis 11-1 0.00 1 0 G1 2645906 unclassified Pseudoxanthomonas 0.00 1 1 S 2969308 Pseudoxanthomonas sp. JBR18 0.01 7 3 G 68 Lysobacter 0.00 4 4 S 2591633 Lysobacter alkalisoli 0.00 2 0 G 2709666 Pseudolysobacter 0.00 2 2 S 2511995 Pseudolysobacter antarcticus 0.00 1 1 G 40323 Stenotrophomonas 0.00 1 0 G 83614 Luteimonas 0.00 1 1 S 2565782 Luteimonas yindakuii 0.00 1 0 G 490567 Arenimonas 0.00 1 1 S 370777 Arenimonas daejeonensis 0.00 3 1 F 1775411 Rhodanobacteraceae 0.00 2 2 G 231454 Dyella 0.06 58 0 O 118969 Legionellales 0.04 38 0 F 444 Legionellaceae 0.04 38 0 G 445 Legionella 0.03 29 0 S 446 Legionella pneumophila 0.03 29 29 S1 91891 Legionella pneumophila subsp. pneumophila 0.01 6 6 S 450 Legionella longbeachae 0.00 3 3 S 1867846 Legionella clemsonensis 0.02 20 10 F 118968 Coxiellaceae 0.01 9 0 G 254245 Aquicella 0.01 9 9 S 254247 Aquicella siphonis 0.00 1 0 G 59195 Rickettsiella 0.00 1 1 G1 2637345 unclassified Rickettsiella 0.05 46 0 O 3084968 Thiohalomonadales 0.05 46 0 F 3084969 Thiohalomonadaceae 0.05 46 0 G 2034504 Sulfurivermis 0.05 46 46 S 1972068 Sulfurivermis fontis 0.05 41 0 O 72273 Thiotrichales 0.04 33 13 F 135616 Piscirickettsiaceae 0.01 7 0 G 2781120 Thiosulfativibrio 0.01 7 7 S 2675053 Thiosulfativibrio zosterae 0.01 7 0 G 2781121 Thiosulfatimonas 0.01 7 7 S 2675054 Thiosulfatimonas sediminis 0.01 6 1 G 933 Thiomicrospira 0.01 5 0 G1 2643099 unclassified Thiomicrospira 0.01 5 5 S 3035472 Thiomicrospira sp. R3 0.01 6 0 F 135617 Thiotrichaceae 0.01 6 6 G 1030 Thiothrix 0.00 1 0 F 34064 Francisellaceae 0.00 1 1 G 262 Francisella 0.00 1 0 F 2056687 Fastidiosibacteraceae 0.00 1 0 G 2056696 Cysteiniphilum 0.00 1 0 G1 2610889 unclassified Cysteiniphilum 0.00 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.04 38 0 O 1706369 Cellvibrionales 0.02 14 0 F 1706373 Microbulbiferaceae 0.02 14 0 G 48073 Microbulbifer 0.02 14 14 S 86173 Microbulbifer elongatus 0.02 14 0 F 1706375 Spongiibacteraceae 0.02 14 0 G 1084558 Oceanicoccus 0.02 14 14 S 716816 Oceanicoccus sagamiensis 0.01 9 5 F 1706372 Halieaceae 0.00 3 0 G 2847769 Aequoribacter 0.00 3 3 S 2518989 Aequoribacter fuscus 0.00 1 0 G 393661 Congregibacter 0.00 1 0 S 393662 Congregibacter litoralis 0.00 1 1 S1 314285 Congregibacter litoralis KT71 0.00 1 0 F 1706371 Cellvibrionaceae 0.00 1 0 G 10 Cellvibrio 0.00 1 1 G1 2624793 unclassified Cellvibrio 0.02 16 0 O 135618 Methylococcales 0.02 15 0 F 403 Methylococcaceae 0.01 11 0 G 3135206 Candidatus Methylocalor 0.01 11 11 S 3108543 Candidatus Methylocalor cossyra 0.00 2 0 G 73778 Methylocaldum 0.00 1 1 S 73780 Methylocaldum szegediense 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 1 0 G 39773 Methylomicrobium 0.00 1 0 S 39775 Methylomicrobium album 0.00 1 1 S1 686340 Methylomicrobium album BG8 0.00 1 0 G 1295378 Methylogaea 0.00 1 1 S 1295382 Methylogaea oryzae 0.00 1 0 F 1486721 Methylothermaceae 0.00 1 1 G 1486720 Methylomarinovum 0.01 13 0 O 1240482 Orbales 0.01 13 1 F 1240483 Orbaceae 0.01 12 0 G 2894762 Zophobihabitans 0.01 12 12 S 1635327 Zophobihabitans entericus 0.01 13 0 O 135615 Cardiobacteriales 0.01 13 0 F 868 Cardiobacteriaceae 0.01 9 0 G 2717 Cardiobacterium 0.01 7 0 G1 2648856 unclassified Cardiobacterium 0.01 7 7 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 2 2 S 2718 Cardiobacterium hominis 0.00 3 0 G 869 Dichelobacter 0.00 3 3 S 870 Dichelobacter nodosus 0.00 1 0 G 13275 Suttonella 0.00 1 0 G1 2908647 unclassified Suttonella 0.00 1 1 S 2908648 Suttonella sp. R2A3 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 1 G 261963 Kangiella 0.00 1 0 O 2975284 Candidatus Comchoanobacterales 0.00 1 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 1 0 G 2975286 Candidatus Comchoanobacter 0.00 1 1 S 2919598 Candidatus Comchoanobacter bicostacola 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.00 1 0 O 3085109 Thiohalobacterales 0.00 1 0 F 3085110 Thiohalobacteraceae 0.00 1 1 G 1273155 Thiohalobacter 2.69 2414 52 C 28211 Alphaproteobacteria 1.74 1558 5 O 204457 Sphingomonadales 1.66 1492 36 F 41297 Sphingomonadaceae 1.54 1385 494 G 165696 Novosphingobium 0.86 774 774 S 13688 Novosphingobium capsulatum 0.11 99 99 S 2728851 Novosphingobium olei 0.02 14 6 G1 2644732 unclassified Novosphingobium 0.00 4 4 S 1609758 Novosphingobium sp. P6W 0.00 3 3 S 3079861 Novosphingobium sp. ZN18A2 0.00 1 1 S 2675225 Novosphingobium sp. Gsoil 351 0.00 3 0 S 48935 Novosphingobium aromaticivorans 0.00 3 3 S1 279238 Novosphingobium aromaticivorans DSM 12444 0.00 1 1 S 2698673 Novosphingobium decolorationis 0.06 55 42 G 13687 Sphingomonas 0.00 4 1 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2937788 Sphingomonas sp. SUN019 0.00 1 1 S 2735134 Sphingomonas sp. AP4-R1 0.00 1 1 S 3078265 Sphingomonas sp. Y38-1Y 0.00 4 4 S 2698679 Sphingomonas changnyeongensis 0.00 2 2 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 S 13689 Sphingomonas paucimobilis 0.00 1 1 S 2681549 Sphingomonas profundi 0.00 1 0 S 397260 Sphingomonas sanxanigenens 0.00 1 1 S1 1123269 Sphingomonas sanxanigenens DSM 19645 = NX02 0.01 5 4 G 165695 Sphingobium 0.00 1 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 407020 Sphingobium sp. MI1205 0.00 4 0 G 1434046 Sphingorhabdus 0.00 3 3 S 1913578 Sphingorhabdus lutea 0.00 1 1 S 392610 Sphingorhabdus lacus 0.00 3 3 G 1227948 Sphingomicrobium 0.00 1 1 G 165697 Sphingopyxis 0.00 1 0 G 2709685 Parasphingorhabdus 0.00 1 0 S 394733 Parasphingorhabdus litoris 0.00 1 1 S1 1123271 Parasphingorhabdus litoris DSM 22379 0.00 1 0 G 1234545 Parasphingopyxis 0.00 1 1 S 2026624 Parasphingopyxis algicola 0.00 1 0 G 1763827 Hankyongella 0.00 1 1 S 1763828 Hankyongella ginsenosidimutans 0.06 55 1 F 335929 Erythrobacteraceae 0.05 46 27 G 2800681 Aurantiacibacter 0.02 19 0 G1 2800693 unclassified Aurantiacibacter 0.02 17 17 S 3003265 Aurantiacibacter sp. MUD11 0.00 2 2 S 3009083 Aurantiacibacter sp. MUD61 0.00 3 0 G 2676755 Croceibacterium 0.00 2 0 G1 2676756 unclassified Croceibacterium 0.00 2 2 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 1 1 S 3064139 Croceibacterium aestuarii 0.00 1 0 G 361177 Altererythrobacter 0.00 1 0 G1 2614945 unclassified Altererythrobacter 0.00 1 1 S 2060312 Altererythrobacter sp. B11 0.00 1 1 G 1855416 Qipengyuania 0.00 1 0 G 2800680 Alteriqipengyuania 0.00 1 1 S 3053610 Alteriqipengyuania flavescens 0.00 1 0 G 2800686 Tsuneonella 0.00 1 1 S 2338327 Tsuneonella amylolytica 0.00 1 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 1 0 G 1111 Porphyrobacter 0.00 1 0 G1 2683265 unclassified Porphyrobacter 0.00 1 1 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.01 6 0 F 2820280 Sphingosinicellaceae 0.01 6 0 G 2883109 Sandaracinobacteroides 0.01 6 6 S 2759707 Sandaracinobacteroides saxicola 0.52 463 20 O 356 Hyphomicrobiales 0.18 163 0 F 118882 Brucellaceae 0.18 163 157 F1 2826938 Brucella/Ochrobactrum group 0.01 6 5 G 234 Brucella 0.00 1 1 S 94625 Brucella intermedia 0.08 69 9 F 119045 Methylobacteriaceae 0.07 60 27 G 407 Methylobacterium 0.03 28 28 S 1775910 Methylobacterium indicum 0.00 4 2 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 426117 Methylobacterium sp. 4-46 0.00 1 1 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 1 1 S 570505 Methylobacterium bullatum 0.06 53 0 F 82115 Rhizobiaceae 0.04 35 27 F1 227290 Rhizobium/Agrobacterium group 0.01 8 0 G 379 Rhizobium 0.01 7 0 S 56730 Rhizobium gallicum 0.01 7 0 S1 142627 Rhizobium gallicum bv. gallicum 0.01 7 7 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.00 1 0 G1 2613769 unclassified Rhizobium 0.00 1 1 S 2926709 Rhizobium sp. CC-CFT758 0.01 12 0 F1 227292 Sinorhizobium/Ensifer group 0.01 11 2 G 28105 Sinorhizobium 0.01 9 0 S 382 Sinorhizobium meliloti 0.01 9 9 S1 1041157 Sinorhizobium meliloti WSM1022 0.00 1 0 G 106591 Ensifer 0.00 1 1 S 106592 Ensifer adhaerens 0.01 5 3 G 34019 Liberibacter 0.00 1 0 S 309868 Candidatus Liberibacter americanus 0.00 1 1 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 1 G 323620 Shinella 0.05 48 0 F 2813035 Parvibaculaceae 0.05 48 0 G 256616 Parvibaculum 0.05 48 0 S 256618 Parvibaculum lavamentivorans 0.05 48 48 S1 402881 Parvibaculum lavamentivorans DS-1 0.04 40 1 F 69277 Phyllobacteriaceae 0.04 33 0 G 68287 Mesorhizobium 0.04 33 33 S 2725666 Mesorhizobium terrae 0.01 6 0 G 2911176 Aquibium 0.01 6 6 S 1670800 Aquibium oceanicum 0.04 35 22 F 41294 Nitrobacteraceae 0.01 13 12 G 374 Bradyrhizobium 0.00 1 1 S 375 Bradyrhizobium japonicum 0.01 9 0 F 45401 Hyphomicrobiaceae 0.01 8 0 G 1484898 Methyloceanibacter 0.01 8 0 G1 2617503 unclassified Methyloceanibacter 0.01 8 8 S 2170729 Methyloceanibacter sp. wino2 0.00 1 0 G 1485594 Methyloligella 0.00 1 0 G1 2625955 unclassified Methyloligella 0.00 1 1 S 2742204 Methyloligella sp. GL2 0.01 7 7 F 31993 Methylocystaceae 0.01 7 0 F 2831106 Devosiaceae 0.01 7 1 G 46913 Devosia 0.01 5 5 S 2774137 Devosia rhizoryzae 0.00 1 0 G1 196773 unclassified Devosia 0.00 1 1 S 3049774 Devosia sp. RR2S18 0.00 4 0 F 335928 Xanthobacteraceae 0.00 3 1 G 556257 Pseudolabrys 0.00 1 1 S 331696 Pseudolabrys taiwanensis 0.00 1 0 G1 2638514 unclassified Pseudolabrys 0.00 1 1 S 2562284 Pseudolabrys sp. FHR47 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.00 2 0 F 255475 Aurantimonadaceae 0.00 2 2 G 414371 Aureimonas 0.00 1 0 F 2685818 Amorphaceae 0.00 1 0 G 1904377 Acuticoccus 0.00 1 0 G1 2631034 unclassified Acuticoccus 0.00 1 1 S 3072793 Acuticoccus sp. MNP-M23 0.00 1 0 F 3142785 Terrirubraceae 0.00 1 0 G 3142786 Terrirubrum 0.00 1 1 S 2895980 Terrarubrum flagellatum 0.00 1 0 F 2831090 Blastochloridaceae 0.00 1 1 G 59282 Blastochloris 0.00 1 0 F 2036754 Chelatococcaceae 0.00 1 1 G 28209 Chelatococcus 0.00 1 0 F 45404 Beijerinckiaceae 0.00 1 0 G 120652 Methylocella 0.00 1 1 S 227605 Methylocella tundrae 0.00 1 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 1 0 G 212791 Enhydrobacter 0.00 1 0 G1 2632691 unclassified Enhydrobacter 0.00 1 1 S 1894999 Enhydrobacter sp. 0.13 117 0 O 204441 Rhodospirillales 0.08 68 0 F 2844601 Stellaceae 0.08 68 0 G 93 Stella 0.08 68 68 S 94 Stella humosa 0.04 34 0 F 2690195 Elioraeaceae 0.04 34 0 G 457933 Elioraea 0.04 34 34 S 2843330 Elioraea tepida 0.01 11 1 F 433 Acetobacteraceae 0.01 8 0 G 125216 Roseomonas 0.01 8 8 S 2768162 Roseomonas haemaphysalidis 0.00 1 0 G 2870717 Pseudoroseomonas 0.00 1 1 S 204525 Pseudoroseomonas cervicalis 0.00 1 0 G 512381 Acidisoma 0.00 1 0 G1 2634065 unclassified Acidisoma 0.00 1 1 S 3040935 Acidisoma sp. PAMC 29798 0.00 2 0 F 41295 Rhodospirillaceae 0.00 2 0 G 1263978 Candidatus Endolissoclinum 0.00 2 2 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 1 G 204447 Skermanella 0.00 1 0 F 2844866 Thalassospiraceae 0.00 1 0 G 1182780 Magnetospira 0.00 1 0 G1 2685734 unclassified Magnetospira 0.00 1 1 S 1288970 Magnetospira sp. QH-2 0.13 114 0 O 204458 Caulobacterales 0.13 114 0 F 76892 Caulobacteraceae 0.11 101 19 G 41275 Brevundimonas 0.09 80 0 G1 2622653 unclassified Brevundimonas 0.08 75 75 S 2591463 Brevundimonas sp. M20 0.01 5 5 S 2560058 Brevundimonas sp. Bb-A 0.00 1 1 S 172043 Brevundimonas nasdae 0.00 1 1 S 2800818 Brevundimonas vitisensis 0.01 9 3 G 20 Phenylobacterium 0.01 5 0 S 284016 Phenylobacterium zucineum 0.01 5 5 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 0 G1 2640670 unclassified Phenylobacterium 0.00 1 1 S 2903901 Phenylobacterium sp. LH3H17 0.00 3 0 G 75 Caulobacter 0.00 2 2 S 88688 Caulobacter segnis 0.00 1 0 G1 2648921 unclassified Caulobacter 0.00 1 1 S 3016000 Caulobacter sp. NIBR1757 0.00 1 0 G 76890 Asticcacaulis 0.00 1 0 G1 2628350 unclassified Asticcacaulis 0.00 1 1 S 3157666 Asticcacaulis sp. MM231 0.05 45 0 O 2800060 Hyphomonadales 0.05 45 0 F 69657 Hyphomonadaceae 0.05 44 44 G 85 Hyphomonas 0.00 1 0 G 2723 Hirschia 0.00 1 0 S 2724 Hirschia baltica 0.00 1 1 S1 582402 Hirschia baltica ATCC 49814 0.03 23 0 O 2066490 Emcibacterales 0.03 23 0 F 2066491 Emcibacteraceae 0.03 23 0 G 2943291 Pseudemcibacter 0.03 23 23 S 2857064 Pseudemcibacter aquimaris 0.02 22 4 O 204455 Rhodobacterales 0.02 15 5 F 31989 Paracoccaceae 0.01 8 6 G 265 Paracoccus 0.00 1 0 S 34003 Paracoccus aminophilus 0.00 1 1 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 S 1945662 Paracoccus contaminans 0.00 1 0 G 3118803 Fontisubflavum 0.00 1 1 S 2978973 Fontisubflavum oceani 0.00 1 0 G 366614 Haematobacter 0.00 1 1 S 195105 Haematobacter massiliensis 0.00 3 2 F 2854170 Roseobacteraceae 0.00 1 1 G 74030 Roseovarius 0.01 11 0 O 766 Rickettsiales 0.01 11 0 F 775 Rickettsiaceae 0.01 11 0 F1 33988 Rickettsieae 0.01 11 0 G 780 Rickettsia 0.01 11 0 G1 114277 spotted fever group 0.01 11 0 S 781 Rickettsia conorii 0.01 11 11 S1 369822 Rickettsia conorii subsp. raoultii 0.01 5 0 O 1921002 Holosporales 0.01 5 0 F 44746 Holosporaceae 0.01 5 0 G 2654634 Candidatus Hydrogenosomobacter 0.01 5 5 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 O 3108222 Geminicoccales 0.00 1 0 F 2066434 Geminicoccaceae 0.00 1 0 G 171436 Tistrella 0.00 1 0 S 171437 Tistrella mobilis 0.00 1 1 S1 1110502 Tistrella mobilis KA081020-065 0.00 1 0 O 2800059 Maricaulales 0.00 1 1 F 2800061 Maricaulaceae 0.00 1 0 O 2493627 Minwuiales 0.00 1 0 F 2493628 Minwuiaceae 0.00 1 0 G 2493629 Minwuia 0.00 1 1 G1 2618799 unclassified Minwuia 0.00 1 0 O 1191478 Magnetococcales 0.00 1 0 F 1191479 Magnetococcaceae 0.00 1 0 G 162171 Magnetococcus 0.00 1 0 S 1124597 Magnetococcus marinus 0.00 1 1 S1 156889 Magnetococcus marinus MC-1 1.25 1122 361 C 28216 Betaproteobacteria 0.75 673 35 O 80840 Burkholderiales 0.34 309 50 F 80864 Comamonadaceae 0.24 218 218 G 80865 Delftia 0.04 33 17 G 283 Comamonas 0.01 9 9 S 379895 Comamonas odontotermitis 0.01 5 5 S 2743470 Comamonas antarctica 0.00 1 1 S 285 Comamonas testosteroni 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 2 2 G 34072 Variovorax 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 1 G 28065 Rhodoferax 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.00 1 0 G 219181 Ottowia 0.00 1 0 G1 2645081 unclassified Ottowia 0.00 1 1 S 3081231 Ottowia sp. SB7-C50 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.22 201 10 F 119060 Burkholderiaceae 0.08 70 13 G 32008 Burkholderia 0.03 28 1 G1 111527 pseudomallei group 0.02 14 11 S 28450 Burkholderia pseudomallei 0.00 1 1 S1 1249473 Burkholderia pseudomallei MSHR491 0.00 1 1 S1 1249470 Burkholderia pseudomallei MSHR1079 0.00 1 1 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.01 13 0 S 57975 Burkholderia thailandensis 0.01 13 13 S1 1249664 Burkholderia thailandensis 34 0.03 26 2 G1 87882 Burkholderia cepacia complex 0.02 20 20 S 488447 Burkholderia contaminans 0.00 3 3 S 95485 Burkholderia stabilis 0.00 1 1 S 152500 Burkholderia dolosa 0.00 3 0 G1 2613784 unclassified Burkholderia 0.00 3 3 S 1494466 Burkholderia sp. FERM BP-3421 0.05 46 2 G 48736 Ralstonia 0.05 44 0 G1 3116862 Ralstonia solanacearum species complex 0.05 44 44 S 305 Ralstonia solanacearum 0.03 25 0 G 106589 Cupriavidus 0.02 22 22 S 164546 Cupriavidus taiwanensis 0.00 2 2 S 367825 Cupriavidus malaysiensis 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.03 25 0 G 2038280 Robbsia 0.03 25 0 G1 2636574 unclassified Robbsia 0.03 25 25 S 3149231 Robbsia sp. KACC 23696 0.01 10 0 G 1822464 Paraburkholderia 0.01 10 10 S 2571748 Paraburkholderia acidisoli 0.01 7 0 G 2018044 Candidatus Vallotia 0.01 7 7 S 1177213 Candidatus Vallotia tarda 0.01 5 0 G 2571159 Mycetohabitans 0.01 5 5 S 417203 Mycetohabitans endofungorum 0.00 1 0 G 47670 Lautropia 0.00 1 1 S 47671 Lautropia mirabilis 0.00 1 1 G 93217 Pandoraea 0.00 1 1 G 131079 Limnobacter 0.06 58 19 F 75682 Oxalobacteraceae 0.02 16 8 F1 2895353 Telluria group 0.01 8 4 G 149698 Massilia 0.00 2 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 1 1 S 2709303 Massilia sp. Se16.2.3 0.00 1 1 S 457921 Massilia varians 0.00 1 1 S 945844 Massilia oculi 0.01 11 9 G 29580 Janthinobacterium 0.00 2 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 3065910 Janthinobacterium sp. J1-1 0.01 6 1 G 963 Herbaspirillum 0.01 5 5 S 863372 Herbaspirillum huttiense 0.01 5 0 G 401469 Undibacterium 0.01 5 1 G1 2630295 unclassified Undibacterium 0.00 4 4 S 3048609 Undibacterium sp. CCC3.4 0.00 1 0 G 1344552 Noviherbaspirillum 0.00 1 0 G1 2617509 unclassified Noviherbaspirillum 0.00 1 1 S 2601898 Noviherbaspirillum sp. UKPF54 0.05 48 0 F 506 Alcaligenaceae 0.02 19 0 G 290425 Advenella 0.02 19 19 S 1481665 Advenella alkanexedens 0.01 13 0 G 152267 Pigmentiphaga 0.01 13 13 S 1940612 Pigmentiphaga aceris 0.01 8 8 G 222 Achromobacter 0.01 6 0 G 1472344 Basilea 0.01 6 0 S 1472345 Basilea psittacipulmonis 0.01 6 6 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 2 0 G 1921582 Orrella 0.00 2 2 S 2163011 Orrella marina 0.02 17 0 F 2975441 Sphaerotilaceae 0.01 12 11 G 93681 Roseateles 0.00 1 1 S 2978473 Roseateles amylovorans 0.00 3 0 G 34102 Sphaerotilus 0.00 3 3 S 2914710 Sphaerotilus microaerophilus 0.00 2 0 G 1114981 Piscinibacter 0.00 2 2 S 946333 Piscinibacter gummiphilus 0.01 5 0 O1 224471 Burkholderiales genera incertae sedis 0.00 3 1 G 32012 Thiomonas 0.00 2 2 S 926 Thiomonas intermedia 0.00 1 0 G 92793 Aquabacterium 0.00 1 1 S 1296669 Aquabacterium olei 0.00 1 0 G 114248 Tepidimonas 0.00 1 1 S 307486 Tepidimonas taiwanensis 0.05 43 0 C1 119066 Betaproteobacteria incertae sedis 0.04 32 0 G 1301080 Candidatus Nasuia 0.04 32 32 S 1160784 Candidatus Nasuia deltocephalinicola 0.01 11 0 G 1381133 Candidatus Profftella 0.01 11 11 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.03 25 0 O 32003 Nitrosomonadales 0.02 19 1 F 32011 Methylophilaceae 0.01 10 0 G 359407 Methylotenera 0.01 10 0 S 359408 Methylotenera mobilis 0.01 10 10 S1 583345 Methylotenera mobilis JLW8 0.01 6 0 G 16 Methylophilus 0.01 6 6 S 17 Methylophilus methylotrophus 0.00 2 0 G 1679002 Candidatus Methylopumilus 0.00 2 2 S 1581680 Candidatus Methylopumilus turicensis 0.00 3 2 F 206379 Nitrosomonadaceae 0.00 1 1 G 914 Nitrosomonas 0.00 2 0 F 90627 Gallionellaceae 0.00 1 0 G 2249462 Ferrigenium 0.00 1 1 S 1682490 Ferrigenium kumadai 0.00 1 0 G 2943286 Sideroxyarcus 0.00 1 1 S 2764705 Sideroxyarcus emersonii 0.00 1 0 F 2772226 Sulfuricellaceae 0.00 1 1 G 1778653 Sulfuriferula 0.02 19 1 O 206351 Neisseriales 0.01 13 3 F 481 Neisseriaceae 0.01 6 0 G 2593687 Aquella 0.01 6 6 S 2067065 Aquella oligotrophica 0.00 4 2 G 482 Neisseria 0.00 1 1 S 486 Neisseria lactamica 0.00 1 1 S 487 Neisseria meningitidis 0.00 4 0 F 2897176 Aquaspirillaceae 0.00 4 0 G 168470 Laribacter 0.00 4 1 S 168471 Laribacter hongkongensis 0.00 3 3 S1 557598 Laribacter hongkongensis HLHK9 0.00 1 0 F 2897177 Chitinibacteraceae 0.00 1 0 G 230666 Chitinibacter 0.00 1 1 S 2739434 Chitinibacter bivalviorum 0.00 1 0 O 1442155 Ferrovales 0.00 1 0 F 1442156 Ferrovaceae 0.00 1 0 G 416212 Ferrovum 0.00 1 1 S 416213 Ferrovum myxofaciens 0.02 22 0 C 1807140 Acidithiobacillia 0.02 22 0 O 225057 Acidithiobacillales 0.02 22 0 F 225058 Acidithiobacillaceae 0.02 22 21 G 119977 Acidithiobacillus 0.00 1 0 S 930 Acidithiobacillus thiooxidans 0.00 1 1 S1 637390 Acidithiobacillus thiooxidans ATCC 19377 12.27 11017 31 D1 1783272 Terrabacteria group 11.23 10085 49 P 1239 Bacillota 11.06 9934 40 C 91061 Bacilli 10.27 9220 2 O 186826 Lactobacillales 10.07 9041 0 F 81852 Enterococcaceae 10.07 9041 0 G 1350 Enterococcus 10.06 9034 9034 S 1351 Enterococcus faecalis 0.01 6 5 S 1352 Enterococcus faecium 0.00 1 1 S1 1328870 Enterococcus faecium UC7251 0.00 1 0 S 1354 Enterococcus hirae 0.00 1 1 S1 768486 Enterococcus hirae ATCC 9790 0.10 94 0 F 1300 Streptococcaceae 0.10 93 27 G 1301 Streptococcus 0.05 44 41 S 1308 Streptococcus thermophilus 0.00 2 2 S1 767463 Streptococcus thermophilus ND03 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.01 7 7 S 1314 Streptococcus pyogenes 0.00 3 3 S 2490633 Streptococcus periodonticum 0.00 2 1 S 1311 Streptococcus agalactiae 0.00 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 1 1 S 1501662 Streptococcus parasuis 0.00 1 1 S 59310 Streptococcus macedonicus 0.00 1 1 S 1825069 Streptococcus marmotae 0.00 1 1 S 1345 Streptococcus ferus 0.00 1 1 S 1111760 Streptococcus troglodytae 0.00 1 1 S 1341 Streptococcus ratti 0.00 1 1 S 2021971 Streptococcus respiraculi 0.00 1 1 S 1313 Streptococcus pneumoniae 0.00 1 1 S 1310 Streptococcus sobrinus 0.00 1 1 S 1304 Streptococcus salivarius 0.00 1 0 G 1357 Lactococcus 0.00 1 1 S 1363 Lactococcus garvieae 0.07 65 9 F 33958 Lactobacillaceae 0.02 18 11 G 46255 Weissella 0.00 3 3 S 1249 Weissella paramesenteroides 0.00 3 3 S 137591 Weissella cibaria 0.00 1 1 S 759620 Weissella ceti 0.01 10 10 G 1243 Leuconostoc 0.01 5 0 G 2767878 Bombilactobacillus 0.01 5 5 S 1303590 Bombilactobacillus bombi 0.00 4 0 G 1578 Lactobacillus 0.00 2 2 S 267818 Lactobacillus kefiranofaciens 0.00 1 1 S 1584 Lactobacillus delbrueckii 0.00 1 1 S 147802 Lactobacillus iners 0.00 4 1 G 2767842 Lactiplantibacillus 0.00 3 2 S 1590 Lactiplantibacillus plantarum 0.00 1 1 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 4 1 G 2767887 Ligilactobacillus 0.00 2 0 S 1622 Ligilactobacillus murinus 0.00 2 2 S1 1235801 Ligilactobacillus murinus ASF361 0.00 1 1 S 89059 Ligilactobacillus acidipiscis 0.00 2 0 G 2759736 Lacticaseibacillus 0.00 2 2 S 1597 Lacticaseibacillus paracasei 0.00 2 0 G 2767877 Apilactobacillus 0.00 2 2 S 1218495 Apilactobacillus apinorum 0.00 2 0 G 2767886 Levilactobacillus 0.00 1 1 S 1580 Levilactobacillus brevis 0.00 1 1 S 2292255 Levilactobacillus suantsaii 0.00 1 1 G 46254 Oenococcus 0.00 1 0 G 559173 Fructobacillus 0.00 1 1 S 2940302 Fructobacillus americanaquae 0.00 1 1 G 2742598 Limosilactobacillus 0.00 1 0 G 2930384 Periweissella 0.00 1 1 S 2506420 Periweissella cryptocerci 0.00 1 0 G 2767890 Paucilactobacillus 0.00 1 1 S 1296540 Paucilactobacillus nenjiangensis 0.02 14 0 F 186827 Aerococcaceae 0.01 8 0 G 2862144 Ruoffia 0.01 8 8 S 87458 Ruoffia tabacinasalis 0.00 4 3 G 1375 Aerococcus 0.00 1 1 S 87541 Aerococcus christensenii 0.00 1 0 G 89092 Ignavigranum 0.00 1 1 S 89093 Ignavigranum ruoffiae 0.00 1 0 G 2761542 Fundicoccus 0.00 1 1 S 2969821 Fundicoccus culcitae 0.00 4 0 F 186828 Carnobacteriaceae 0.00 2 0 G 82800 Desemzia 0.00 2 2 S 82801 Desemzia incerta 0.00 2 0 G 191769 Marinilactibacillus 0.00 2 0 G1 2632303 unclassified Marinilactibacillus 0.00 2 2 S 1911586 Marinilactibacillus sp. 15R 0.75 674 26 O 1385 Bacillales 0.48 427 51 F 186817 Bacillaceae 0.17 157 6 G 1386 Bacillus 0.09 85 1 G1 653685 Bacillus subtilis group 0.05 44 1 G2 1938374 Bacillus amyloliquefaciens group 0.03 29 29 S 492670 Bacillus velezensis 0.01 13 10 S 1390 Bacillus amyloliquefaciens 0.00 3 3 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 1 1 S 659243 Bacillus siamensis 0.04 37 37 S 1423 Bacillus subtilis 0.00 2 1 S 1452 Bacillus atrophaeus 0.00 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 1 1 S 1402 Bacillus licheniformis 0.05 42 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.04 40 40 S 2841656 Bacillus sp. ZHX3 0.00 2 2 S 467262 Bacillus sp. T3 0.02 22 0 G1 86661 Bacillus cereus group 0.01 9 8 S 1428 Bacillus thuringiensis 0.00 1 1 S1 180850 Bacillus thuringiensis serovar indiana 0.01 8 8 S 1392 Bacillus anthracis 0.00 2 1 S 1396 Bacillus cereus 0.00 1 1 S1 1003239 Bacillus cereus C1L 0.00 2 2 S 2026186 Bacillus paranthracis 0.00 1 0 G2 2750818 unclassified Bacillus cereus group 0.00 1 1 S 1892404 Bacillus sp. ABP14 0.00 1 1 S 2728853 Bacillus fonticola 0.00 1 0 G1 1792192 Bacillus altitudinis complex 0.00 1 1 S 293387 Bacillus altitudinis 0.08 73 64 G 2837504 Heyndrickxia 0.01 9 7 S 1398 Heyndrickxia coagulans 0.00 2 2 S1 345219 Heyndrickxia coagulans 36D1 0.05 43 43 G 1055323 Aeribacillus 0.03 26 25 G 2893057 Shouchella 0.00 1 1 S 79880 Shouchella clausii 0.03 24 0 G 2893056 Halalkalibacter 0.03 24 24 S 199441 Halalkalibacter krulwichiae 0.01 11 0 G 175304 Lentibacillus 0.01 10 10 S 1472767 Lentibacillus amyloliquefaciens 0.00 1 0 G1 2614679 unclassified Lentibacillus 0.00 1 1 S 2518176 Lentibacillus sp. CBA3610 0.01 10 0 G 400634 Lysinibacillus 0.01 8 8 S 2086577 Lysinibacillus timonensis 0.00 1 1 S 2590012 Lysinibacillus agricola 0.00 1 0 G1 2636778 unclassified Lysinibacillus 0.00 1 1 S 2954544 Lysinibacillus sp. FSL W7-1291 0.01 8 0 G 2005375 Alkalicoccus 0.01 8 8 S 1667239 Alkalicoccus halolimnae 0.01 6 0 G 2837508 Rossellomorea 0.01 6 6 S 218284 Rossellomorea vietnamensis 0.01 6 0 G 2800373 Priestia 0.01 6 6 S 1404 Priestia megaterium 0.00 3 0 G 84406 Virgibacillus 0.00 3 3 S 447199 Virgibacillus salarius 0.00 3 2 G 2685905 Salicibibacter 0.00 1 1 S 2743001 Salicibibacter cibi 0.00 2 0 G 3033930 Fervidibacillus 0.00 2 2 S 2980026 Fervidibacillus albus 0.00 1 0 G 1433999 Domibacillus 0.00 1 0 G1 2632383 unclassified Domibacillus 0.00 1 1 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 1 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 1 0 S 86665 Halalkalibacterium halodurans 0.00 1 1 S1 272558 Halalkalibacterium halodurans C-125 0.00 1 0 G 2785518 Radiobacillus 0.00 1 1 S 2594883 Radiobacillus deserti 0.00 1 1 G 182709 Oceanobacillus 0.22 197 1 F 90964 Staphylococcaceae 0.22 196 33 G 1279 Staphylococcus 0.16 141 141 S 1280 Staphylococcus aureus 0.01 8 8 S 1283 Staphylococcus haemolyticus 0.00 3 3 S 29388 Staphylococcus capitis 0.00 2 0 S 1282 Staphylococcus epidermidis 0.00 2 2 S1 176280 Staphylococcus epidermidis ATCC 12228 0.00 2 2 S 1286 Staphylococcus simulans 0.00 2 2 S 28035 Staphylococcus lugdunensis 0.00 2 2 S 1290 Staphylococcus hominis 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 1 1 S 985002 Staphylococcus argenteus 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.02 14 0 F 186822 Paenibacillaceae 0.01 9 1 G 44249 Paenibacillus 0.01 6 0 G1 185978 unclassified Paenibacillus 0.01 6 6 S 715179 Paenibacillus sp. sptzw28 0.00 2 2 S 1406 Paenibacillus polymyxa 0.00 4 0 F1 85151 Aneurinibacillus group 0.00 4 0 G 55079 Aneurinibacillus 0.00 3 3 S 1500254 Aneurinibacillus soli 0.00 1 0 G1 2642329 unclassified Aneurinibacillus 0.00 1 1 S 3022697 Aneurinibacillus sp. Ricciae_BoGa-3 0.00 1 0 G 76632 Thermobacillus 0.00 1 0 S 377615 Thermobacillus composti 0.00 1 1 S1 717605 Thermobacillus composti KWC4 0.01 6 0 F 186820 Listeriaceae 0.00 4 0 G 1637 Listeria 0.00 2 0 S 1638 Listeria ivanovii 0.00 2 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.00 2 2 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 1 1 S 1639 Listeria monocytogenes 0.00 1 0 G1 2642072 unclassified Listeria 0.00 1 1 S 1844999 Listeria sp. PSOL-1 0.00 2 0 G 2755 Brochothrix 0.00 2 2 S 2756 Brochothrix thermosphacta 0.00 2 0 F 186823 Alicyclobacillaceae 0.00 2 1 G 29330 Alicyclobacillus 0.00 1 1 S 2931921 Alicyclobacillus mengziensis 0.00 1 0 F 186818 Planococcaceae 0.00 1 1 G 648802 Rummeliibacillus 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 F 539003 Bacillales Family X. Incertae Sedis 0.00 1 0 G 1609627 Hydrogenibacillus 0.00 1 0 G1 2773237 unclassified Hydrogenibacillus 0.00 1 1 S 2866627 Hydrogenibacillus sp. N12 0.09 82 2 C 186801 Clostridia 0.08 68 4 O 186802 Eubacteriales 0.03 23 0 F 31979 Clostridiaceae 0.03 23 0 G 1485 Clostridium 0.01 11 11 S 1716543 Clostridium thermarum 0.01 6 6 S 1502 Clostridium perfringens 0.00 3 0 G1 2614128 unclassified Clostridium 0.00 2 2 S 2483110 Clostridium sp. JN-1 0.00 1 1 S 411486 Clostridium sp. M62/1 0.00 2 2 S 1491 Clostridium botulinum 0.00 1 1 S 36839 Clostridium felsineum 0.02 14 0 F 216572 Oscillospiraceae 0.01 12 0 G 1263 Ruminococcus 0.01 11 11 S 1161942 Ruminococcus champanellensis 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.00 2 0 G 2842531 Solibaculum 0.00 2 2 S 2780922 Solibaculum mannosilyticum 0.01 9 0 F 186806 Eubacteriaceae 0.01 9 9 G 33951 Acetobacterium 0.01 7 0 F 186807 Peptococcaceae 0.01 7 0 G 2924872 Acididesulfobacillus 0.01 7 7 S 1561005 Acididesulfobacillus acetoxydans 0.01 5 0 F 2937909 Desulfitobacteriaceae 0.01 5 5 G 56112 Dehalobacter 0.00 4 4 F 31984 Heliobacteriaceae 0.00 2 0 O1 538999 Eubacteriales incertae sedis 0.00 1 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 1 1 G 73918 Thermaerobacter 0.00 1 0 G 1392389 Intestinimonas 0.00 1 1 S 1297617 Intestinimonas butyriciproducens 0.00 4 1 O 3085636 Lachnospirales 0.00 2 0 F 3018741 Cellulosilyticaceae 0.00 2 2 G 698776 Cellulosilyticum 0.00 1 0 F 186803 Lachnospiraceae 0.00 1 0 G 2569097 Anaerobutyricum 0.00 1 1 S 39488 Anaerobutyricum hallii 0.00 3 0 O 3082720 Peptostreptococcales 0.00 2 0 F 3030910 Anaerovoracaceae 0.00 1 1 G 86331 Mogibacterium 0.00 1 0 G 1926556 Emergencia 0.00 1 0 G1 2642996 unclassified Emergencia 0.00 1 1 S 3114296 Emergencia sp. JLR.KK010 0.00 1 1 F 186804 Peptostreptococcaceae 0.00 2 0 O 53433 Halanaerobiales 0.00 2 0 F 53434 Halobacteroidaceae 0.00 2 0 G 42417 Halobacteroides 0.00 2 0 S 42422 Halobacteroides halobius 0.00 2 2 S1 748449 Halobacteroides halobius DSM 5150 0.00 1 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 140458 Thermacetogenium 0.00 1 0 S 85874 Thermacetogenium phaeum 0.00 1 1 S1 1089553 Thermacetogenium phaeum DSM 12270 0.00 1 0 O 2770089 Thermosediminibacterales 0.00 1 0 F 2770092 Tepidanaerobacteraceae 0.00 1 0 G 499228 Tepidanaerobacter 0.00 1 0 S 499229 Tepidanaerobacter acetatoxydans 0.00 1 1 S1 1209989 Tepidanaerobacter acetatoxydans Re1 0.00 1 0 O 3085656 Monoglobales 0.00 1 0 F 3085657 Monoglobaceae 0.00 1 0 G 2039302 Monoglobus 0.00 1 1 S 1981510 Monoglobus pectinilyticus 0.01 10 0 C 1737404 Tissierellia 0.01 10 0 O 1737405 Tissierellales 0.01 10 0 F 1570339 Peptoniphilaceae 0.01 8 0 G 165779 Anaerococcus 0.01 7 0 S 33034 Anaerococcus prevotii 0.01 7 7 S1 525919 Anaerococcus prevotii DSM 20548 0.00 1 0 G1 2614126 unclassified Anaerococcus 0.00 1 1 S 3036300 Anaerococcus sp. Marseille-Q7828 0.00 1 0 G 31983 Helcococcus 0.00 1 1 S 72026 Helcococcus ovis 0.00 1 1 G 162289 Peptoniphilus 0.01 8 0 C 909932 Negativicutes 0.01 8 0 O 1843489 Veillonellales 0.01 8 0 F 31977 Veillonellaceae 0.01 6 0 G 906 Megasphaera 0.01 6 6 S 2144175 Megasphaera stantonii 0.00 1 0 G 29465 Veillonella 0.00 1 1 S 39777 Veillonella atypica 0.00 1 0 G 39948 Dialister 0.00 1 1 S 487173 Dialister succinatiphilus 0.00 2 0 C 3086086 Dethiobacteria 0.00 2 0 O 3086087 Dethiobacterales 0.00 2 0 F 3086088 Dethiobacteraceae 0.00 2 0 G 338648 Candidatus Contubernalis 0.00 2 2 S 338645 Candidatus Contubernalis alkalaceticus 0.89 801 0 P 201174 Actinomycetota 0.88 788 80 C 1760 Actinomycetes 0.46 412 5 O 85009 Propionibacteriales 0.45 406 12 F 31957 Propionibacteriaceae 0.43 385 9 G 1912216 Cutibacterium 0.42 375 374 S 1747 Cutibacterium acnes 0.00 1 1 S1 1122995 Cutibacterium acnes DSM 1897 0.00 1 1 S 33010 Cutibacterium avidum 0.01 5 0 G 1912215 Acidipropionibacterium 0.01 5 5 S 1749 Acidipropionibacterium jensenii 0.00 2 1 G 72763 Tessaracoccus 0.00 1 1 S 1285901 Tessaracoccus defluvii 0.00 1 1 G 29404 Microlunatus 0.00 1 1 G 1085622 Propioniciclava 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 1 G 1839 Nocardioides 0.13 119 0 O 85007 Mycobacteriales 0.09 77 0 F 1653 Corynebacteriaceae 0.09 77 22 G 1716 Corynebacterium 0.02 17 17 S 108486 Corynebacterium falsenii 0.02 14 0 S 1717 Corynebacterium diphtheriae 0.02 14 14 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.01 5 5 S 38289 Corynebacterium jeikeium 0.01 5 5 S 38284 Corynebacterium accolens 0.00 4 4 S 53374 Corynebacterium coyleae 0.00 2 0 G1 2624378 unclassified Corynebacterium 0.00 2 2 S 1487956 Corynebacterium sp. ATCC 6931 0.00 2 2 S 2080740 Corynebacterium yudongzhengii 0.00 1 0 S 575200 Corynebacterium maris 0.00 1 1 S1 1224163 Corynebacterium maris DSM 45190 0.00 1 1 S 679663 Corynebacterium canis 0.00 1 1 S 161879 Corynebacterium kroppenstedtii 0.00 1 1 S 2487892 Corynebacterium urogenitale 0.00 1 1 S 1719 Corynebacterium pseudotuberculosis 0.00 1 0 S 1718 Corynebacterium glutamicum 0.00 1 1 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.02 21 0 F 85025 Nocardiaceae 0.02 19 0 G 1827 Rhodococcus 0.02 19 19 S 37919 Rhodococcus opacus 0.00 1 0 G 1817 Nocardia 0.00 1 1 S 2984338 Nocardia sputorum 0.00 1 0 G 2979332 Prescottella 0.00 1 1 S 43767 Prescottella equi 0.02 15 0 F 1762 Mycobacteriaceae 0.02 15 1 G 1763 Mycobacterium 0.02 14 0 G1 77643 Mycobacterium tuberculosis complex 0.02 14 14 S 1773 Mycobacterium tuberculosis 0.01 6 0 F 2805586 Lawsonellaceae 0.01 6 0 G 1847725 Lawsonella 0.01 6 6 S 1528099 Lawsonella clevelandensis 0.07 64 0 O 85011 Kitasatosporales 0.07 64 4 F 2062 Streptomycetaceae 0.07 60 4 G 1883 Streptomyces 0.03 31 12 G1 2593676 unclassified Streptomyces 0.00 4 4 S 2099584 Streptomyces sp. ICC4 0.00 3 3 S 2933779 Streptomyces sp. WAC00303 0.00 2 2 S 2903645 Streptomyces sp. NBC_00310 0.00 2 2 S 2898276 Streptomyces sp. MRC013 0.00 2 2 S 2951988 Streptomyces sp. JUS-F4 0.00 2 2 S 2975870 Streptomyces sp. NBC_01498 0.00 2 2 S 2976015 Streptomyces sp. NBC_01477 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2594460 Streptomyces sp. S1A1-8 0.00 4 0 G1 629295 Streptomyces griseus group 0.00 4 0 G2 1482561 Streptomyces anulatus subgroup 0.00 4 4 S 1892 Streptomyces anulatus 0.00 3 3 S 1048205 Streptomyces uncialis 0.00 2 2 S 1690221 Streptomyces spongiicola 0.00 2 0 G1 1477431 Streptomyces albidoflavus group 0.00 2 2 S 1886 Streptomyces albidoflavus 0.00 2 2 S 146923 Streptomyces parvulus 0.00 2 2 S 40318 Streptomyces nodosus 0.00 2 0 G1 2867164 Streptomyces rochei group 0.00 2 2 S 67376 Streptomyces vinaceusdrappus 0.00 1 0 S 33903 Streptomyces avermitilis 0.00 1 1 S1 227882 Streptomyces avermitilis MA-4680 = NBRC 14893 0.00 1 1 S 67304 Streptomyces griseorubiginosus 0.00 1 1 S 1535768 Streptomyces lunaelactis 0.00 1 1 S 68219 Streptomyces iakyrus 0.00 1 0 G1 2838335 Streptomyces aurantiacus group 0.00 1 1 S 188770 Streptomyces koyangensis 0.00 1 1 S 1961 Streptomyces virginiae 0.00 1 1 S 193462 Streptomyces niveus 0.00 1 1 S 1890 Streptomyces antibioticus 0.07 60 7 O 85006 Micrococcales 0.05 42 1 F 1268 Micrococcaceae 0.04 33 0 G 169133 Citricoccus 0.04 33 0 G1 2632435 unclassified Citricoccus 0.04 33 33 S 2567881 Citricoccus sp. SGAir0253 0.00 4 4 G 1269 Micrococcus 0.00 2 1 G 32207 Rothia 0.00 1 1 S 43675 Rothia mucilaginosa 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2828862 Arthrobacter sp. Helios 0.00 1 0 G 1742993 Pseudarthrobacter 0.00 1 0 G1 2647000 unclassified Pseudarthrobacter 0.00 1 1 S 2973976 Pseudarthrobacter sp. NS4 0.00 4 2 F 85023 Microbacteriaceae 0.00 1 1 G 55968 Leucobacter 0.00 1 0 F1 1655488 Luna cluster 0.00 1 1 F2 1655489 Luna-1 subcluster 0.00 3 0 F 85019 Brevibacteriaceae 0.00 3 2 G 1696 Brevibacterium 0.00 1 0 G1 2614124 unclassified Brevibacterium 0.00 1 1 S 2575923 Brevibacterium sp. CS2 0.00 2 1 F 85020 Dermabacteraceae 0.00 1 0 G 36739 Dermabacter 0.00 1 1 S 1667168 Dermabacter jinjuensis 0.00 1 0 F 2805590 Ornithinimicrobiaceae 0.00 1 0 G 265976 Serinicoccus 0.00 1 0 S 247333 Serinicoccus marinus 0.00 1 1 S1 1123251 Serinicoccus marinus DSM 15273 0.00 1 0 O1 577468 Micrococcales incertae sedis 0.00 1 0 G 2888818 Pengzhenrongella 0.00 1 1 S 2819238 Pengzhenrongella sicca 0.03 25 0 O 85010 Pseudonocardiales 0.03 25 1 F 2070 Pseudonocardiaceae 0.02 21 21 G 1813 Amycolatopsis 0.00 2 0 G 1847 Pseudonocardia 0.00 1 1 S 37331 Pseudonocardia petroleophila 0.00 1 0 S 240495 Pseudonocardia dioxanivorans 0.00 1 1 S1 675635 Pseudonocardia dioxanivorans CB1190 0.00 1 0 G 1835 Saccharopolyspora 0.00 1 0 G1 2646250 unclassified Saccharopolyspora 0.00 1 1 S 3118084 Saccharopolyspora sp. SCSIO 74807 0.02 14 0 O 2037 Actinomycetales 0.02 14 4 F 2049 Actinomycetaceae 0.01 8 7 G 2529408 Schaalia 0.00 1 0 G1 2691889 unclassified Schaalia 0.00 1 1 S 2758572 Schaalia sp. JY-X169 0.00 2 1 G 1654 Actinomyces 0.00 1 0 G1 2609248 unclassified Actinomyces 0.00 1 1 S 2708340 Actinomyces sp. zg-332 0.01 5 0 O 622452 Kineosporiales 0.01 5 0 F 83778 Kineosporiaceae 0.01 5 3 G 33981 Kineococcus 0.00 2 0 S 131568 Kineococcus radiotolerans 0.00 2 2 S1 266940 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 0.00 4 0 O 85008 Micromonosporales 0.00 4 3 F 28056 Micromonosporaceae 0.00 1 1 G 390988 Actinocatenispora 0.00 2 0 O 85004 Bifidobacteriales 0.00 2 0 F 31953 Bifidobacteriaceae 0.00 2 1 G 1678 Bifidobacterium 0.00 1 0 S 216816 Bifidobacterium longum 0.00 1 1 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 0 O 85014 Glycomycetales 0.00 1 0 F 85034 Glycomycetaceae 0.00 1 0 G 283810 Stackebrandtia 0.00 1 0 S 283811 Stackebrandtia nassauensis 0.00 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.00 1 0 O 1643682 Geodermatophilales 0.00 1 0 F 85030 Geodermatophilaceae 0.00 1 0 G 1860 Geodermatophilus 0.00 1 0 S 1861 Geodermatophilus obscurus 0.00 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.00 1 0 O 414714 Catenulisporales 0.00 1 0 F 414877 Catenulisporaceae 0.00 1 0 G 414878 Catenulispora 0.00 1 0 S 304895 Catenulispora acidiphila 0.00 1 1 S1 479433 Catenulispora acidiphila DSM 44928 0.01 6 0 C 84992 Acidimicrobiia 0.01 6 0 O 84993 Acidimicrobiales 0.01 6 0 F 633392 Iamiaceae 0.01 6 0 G 467975 Iamia 0.00 4 0 G1 2624035 unclassified Iamia 0.00 4 4 S 2722752 Iamia sp. SCSIO 61187 0.00 2 2 S 467976 Iamia majanohamensis 0.00 3 1 C 1497346 Thermoleophilia 0.00 1 0 O 588673 Solirubrobacterales 0.00 1 0 F 320583 Conexibacteraceae 0.00 1 0 G 191494 Conexibacter 0.00 1 1 G1 2627773 unclassified Conexibacter 0.00 1 0 O 588674 Thermoleophilales 0.00 1 0 F 320796 Thermoleophilaceae 0.00 1 0 G 192992 Thermoleophilum 0.00 1 1 S 29539 Thermoleophilum album 0.00 2 0 C 84998 Coriobacteriia 0.00 2 0 O 84999 Coriobacteriales 0.00 2 2 F 1643824 Atopobiaceae 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 0 G 42255 Rubrobacter 0.00 1 1 S 49319 Rubrobacter xylanophilus 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1755823 Egicoccales 0.00 1 0 F 1755824 Egicoccaceae 0.00 1 0 G 1755825 Egicoccus 0.00 1 1 S 1670830 Egicoccus halophilus 0.05 41 0 P 200795 Chloroflexota 0.03 24 0 C 32061 Chloroflexia 0.03 24 0 O 32064 Chloroflexales 0.03 24 0 O1 1508594 Chloroflexineae 0.03 24 0 F 1106 Chloroflexaceae 0.03 24 0 G 1107 Chloroflexus 0.03 24 0 S 152260 Chloroflexus aggregans 0.03 24 24 S1 326427 Chloroflexus aggregans DSM 9485 0.01 10 0 C 475962 Caldilineae 0.01 10 0 O 475963 Caldilineales 0.01 10 0 F 475964 Caldilineaceae 0.01 10 0 G 233191 Caldilinea 0.01 10 0 S 133453 Caldilinea aerophila 0.01 10 10 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.01 5 0 C 292625 Anaerolineae 0.01 5 0 O 292629 Anaerolineales 0.01 5 1 F 292628 Anaerolineaceae 0.00 4 0 G 1649478 Pelolinea 0.00 4 4 S 913107 Pelolinea submarina 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 670486 Dehalogenimonas 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.04 37 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.04 37 0 P 1117 Cyanobacteriota 0.04 37 7 C 3028117 Cyanophyceae 0.02 15 2 O 1161 Nostocales 0.01 13 0 F 2661849 Calotrichaceae 0.01 13 0 G 1186 Calothrix 0.01 13 0 G1 2619626 unclassified Calothrix 0.01 13 13 S 1337936 Calothrix sp. 336/3 0.01 11 0 C1 1301283 Oscillatoriophycideae 0.01 11 0 O 1150 Oscillatoriales 0.01 9 0 F 2934961 Sirenicapillariaceae 0.01 9 0 G 2596745 Limnospira 0.01 9 0 S 147322 Limnospira indica 0.01 9 9 S1 2760438 Limnospira indica BM01 0.00 2 0 F 1892254 Oscillatoriaceae 0.00 2 0 G 1198 Phormidium 0.00 2 0 S 2974039 Phormidium yuhuli 0.00 2 2 S1 2940671 Phormidium yuhuli AB48 0.00 1 0 O 1890424 Synechococcales 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 0 G1 2626047 unclassified Synechococcus 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 0 O 1955042 Gloeomargaritales 0.00 1 0 F 1955043 Gloeomargaritaceae 0.00 1 0 G 1188227 Gloeomargarita 0.00 1 0 S 1188228 Gloeomargarita lithophora 0.00 1 1 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.00 1 0 O 2881377 Pseudanabaenales 0.00 1 0 F 1890436 Pseudanabaenaceae 0.00 1 0 G 1152 Pseudanabaena 0.00 1 0 G1 2593292 unclassified Pseudanabaena 0.00 1 1 S 82654 Pseudanabaena sp. PCC 7367 0.00 1 0 O 3079749 Leptolyngbyales 0.00 1 0 F 1890438 Leptolyngbyaceae 0.00 1 0 F1 3081713 Leptolyngbya group 0.00 1 0 G 47251 Leptolyngbya 0.00 1 0 G1 2650499 unclassified Leptolyngbya 0.00 1 1 S 2812896 Leptolyngbya sp. 7M 0.02 14 8 P 544448 Mycoplasmatota 0.00 4 0 O 2790996 Mycoplasmoidales 0.00 3 0 F 2790998 Mycoplasmoidaceae 0.00 3 3 G 2129 Ureaplasma 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2767358 Mycoplasmopsis 0.00 1 1 S 114880 Mycoplasmopsis columbinasalis 0.00 2 0 C 31969 Mollicutes 0.00 2 0 O 2085 Mycoplasmatales 0.00 2 0 F 2092 Mycoplasmataceae 0.00 2 0 G 2093 Mycoplasma 0.00 1 0 G1 2683645 unclassified Mycoplasma 0.00 1 1 S 2967302 Mycoplasma sp. 1018B 0.00 1 0 G1 656088 Mycoplasma mycoides group 0.00 1 1 S 1179777 Mycoplasma feriruminatoris 0.01 6 0 P 67819 Armatimonadota 0.01 6 0 C 1663419 Fimbriimonadia 0.01 6 0 O 1663425 Fimbriimonadales 0.01 6 0 F 1663426 Fimbriimonadaceae 0.01 6 0 G 1005038 Fimbriimonas 0.01 6 0 S 1005039 Fimbriimonas ginsengisoli 0.01 6 6 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.00 2 0 P 1297 Deinococcota 0.00 2 0 C 188787 Deinococci 0.00 2 0 O 118964 Deinococcales 0.00 2 0 F 183710 Deinococcaceae 0.00 2 1 G 1298 Deinococcus 0.00 1 0 S 432329 Deinococcus peraridilitoris 0.00 1 1 S1 937777 Deinococcus peraridilitoris DSM 19664 4.20 3775 0 D1 1783270 FCB group 4.19 3760 0 D2 68336 Bacteroidota/Chlorobiota group 4.17 3740 2 P 976 Bacteroidota 4.03 3621 0 C 768503 Cytophagia 4.03 3621 1 O 768507 Cytophagales 4.02 3611 0 F 89373 Cytophagaceae 4.02 3611 0 G 107 Spirosoma 4.02 3608 3608 S 2666025 Spirosoma endbachense 0.00 3 3 S 2735870 Spirosoma taeanense 0.01 5 0 F 2762286 Fulvivirgaceae 0.01 5 0 G 1433993 Chryseolinea 0.01 5 5 S 2321403 Chryseolinea soli 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 1 1 G 89966 Hymenobacter 0.00 1 0 G 1649474 Nibribacter 0.00 1 1 S 2698458 Nibribacter ruber 0.00 1 0 F 3141701 Flectobacillaceae 0.00 1 0 G 2676247 Aquirufa 0.00 1 1 S 2516557 Aquirufa nivalisilvae 0.00 1 0 F 3141702 Leadbetterellaceae 0.00 1 0 G 312278 Emticicia 0.00 1 0 S 312279 Emticicia oligotrophica 0.00 1 1 S1 929562 Emticicia oligotrophica DSM 17448 0.06 52 0 C 117743 Flavobacteriia 0.06 52 1 O 200644 Flavobacteriales 0.05 46 3 F 49546 Flavobacteriaceae 0.02 20 0 G 286104 Winogradskyella 0.02 20 20 S 2686077 Winogradskyella forsetii 0.02 15 0 G 762641 Muriicola 0.02 15 15 S 2507538 Muriicola soli 0.00 3 2 G 237 Flavobacterium 0.00 1 1 S 2175091 Flavobacterium album 0.00 3 0 G 2831916 Pukyongia 0.00 3 3 S 2094025 Pukyongia salina 0.00 2 0 G 326319 Dokdonia 0.00 2 0 G1 2615033 unclassified Dokdonia 0.00 2 2 S 983548 Dokdonia sp. 4H-3-7-5 0.00 4 0 F 2762318 Weeksellaceae 0.00 2 2 G 59734 Empedobacter 0.00 1 1 G 501783 Cloacibacterium 0.00 1 0 F1 2782232 Chryseobacterium group 0.00 1 0 G 59732 Chryseobacterium 0.00 1 1 S 1813611 Chryseobacterium cucumeris 0.00 1 0 O1 313602 Flavobacteriales incertae sedis 0.00 1 0 G 336809 Candidatus Karelsulcia 0.00 1 1 S 336810 Candidatus Karelsulcia muelleri 0.04 34 0 C 200643 Bacteroidia 0.04 34 0 O 171549 Bacteroidales 0.03 24 0 F 171552 Prevotellaceae 0.02 17 0 G 838 Prevotella 0.02 17 17 S 28131 Prevotella intermedia 0.01 7 4 G 2974251 Segatella 0.00 2 2 S 165179 Segatella copri 0.00 1 1 S 2518605 Segatella hominis 0.01 8 0 F 815 Bacteroidaceae 0.01 8 0 G 816 Bacteroides 0.01 7 7 S 818 Bacteroides thetaiotaomicron 0.00 1 1 S 817 Bacteroides fragilis 0.00 1 0 F 2005525 Tannerellaceae 0.00 1 0 G 375288 Parabacteroides 0.00 1 1 S 1217282 Parabacteroides faecis 0.00 1 0 F 2760872 Tenuifilaceae 0.00 1 0 G 2760873 Tenuifilum 0.00 1 1 S 2590900 Tenuifilum thalassicum 0.03 28 0 C 1853228 Chitinophagia 0.03 28 0 O 1853229 Chitinophagales 0.03 28 1 F 563835 Chitinophagaceae 0.03 25 25 G 79328 Chitinophaga 0.00 1 1 G 379899 Niabella 0.00 1 0 G 504481 Sediminibacterium 0.00 1 1 G1 2635961 unclassified Sediminibacterium 0.00 3 0 C 117747 Sphingobacteriia 0.00 3 0 O 200666 Sphingobacteriales 0.00 2 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 1 S 662858 Sphingobacterium bambusae 0.00 1 0 G 1649482 Pseudopedobacter 0.00 1 0 S 151895 Pseudopedobacter saltans 0.00 1 1 S1 762903 Pseudopedobacter saltans DSM 12145 0.00 1 0 F 3088888 Aurantibacillaceae 0.00 1 0 G 3088889 Aurantibacillus 0.00 1 1 S 3036359 Aurantibacillus circumpalustris 0.02 20 0 P 1853220 Rhodothermota 0.02 20 0 C 1853222 Rhodothermia 0.02 20 4 O 1853224 Rhodothermales 0.02 15 0 F 563843 Rhodothermaceae 0.02 15 0 G 2893090 Rhodocaloribacter 0.02 15 15 S 2558931 Rhodocaloribacter litoris 0.00 1 0 F 1853225 Salinibacteraceae 0.00 1 0 G 146918 Salinibacter 0.00 1 1 S 146919 Salinibacter ruber 0.02 15 0 P 456828 Candidatus Cloacimonadota 0.02 15 0 C 3039863 Candidatus Cloacimonadia 0.02 15 0 O 3039864 Candidatus Cloacimonadales 0.02 15 0 F 3039865 Candidatus Cloacimonadaceae 0.02 15 0 G 456826 Candidatus Cloacimonas 0.02 15 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.02 15 15 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.30 273 0 P 508458 Synergistota 0.30 273 0 C 649775 Synergistia 0.30 273 0 O 649776 Synergistales 0.30 273 0 F 649777 Synergistaceae 0.30 271 0 G 81411 Aminomonas 0.30 271 0 S 81412 Aminomonas paucivorans 0.30 271 271 S1 584708 Aminomonas paucivorans DSM 12260 0.00 2 0 G 508459 Cloacibacillus 0.00 2 2 S 1197717 Cloacibacillus porcorum 0.08 69 0 P 29547 Campylobacterota 0.08 69 0 C 3031852 Epsilonproteobacteria 0.08 69 0 O 213849 Campylobacterales 0.07 60 0 F 72293 Helicobacteraceae 0.07 60 1 G 209 Helicobacter 0.06 54 54 S 213 Helicobacter cinaedi 0.01 5 5 S 210 Helicobacter pylori 0.01 5 0 F 2771471 Sulfurimonadaceae 0.01 5 0 G 202746 Sulfurimonas 0.01 5 5 G1 2623549 unclassified Sulfurimonas 0.00 4 0 F 72294 Campylobacteraceae 0.00 4 0 G 194 Campylobacter 0.00 3 3 S 449520 Campylobacter canadensis 0.00 1 0 S 522485 Campylobacter avium 0.00 1 1 S1 522484 Campylobacter avium LMG 24591 0.07 66 0 D1 1783257 PVC group 0.05 49 1 P 203682 Planctomycetota 0.05 46 5 C 203683 Planctomycetia 0.04 35 0 O 2691354 Pirellulales 0.04 32 13 F 2691357 Pirellulaceae 0.02 19 0 G 265487 Blastopirellula 0.02 19 0 G1 2647022 unclassified Blastopirellula 0.02 19 19 S 2943192 Blastopirellula sp. J2-11 0.00 3 1 F 2691359 Lacipirellulaceae 0.00 1 0 G 1400386 Bythopirellula 0.00 1 1 S 1400387 Bythopirellula goksoeyrii 0.00 1 0 G 2795782 Botrimarina 0.00 1 1 S 2528022 Botrimarina mediterranea 0.01 6 0 O 112 Planctomycetales 0.01 6 0 F 126 Planctomycetaceae 0.00 4 0 G 2795865 Thalassoglobus 0.00 4 4 S 2527994 Thalassoglobus polymorphus 0.00 1 0 G 1649453 Gimesia 0.00 1 1 S 2527964 Gimesia aquarii 0.00 1 0 G 2795777 Maioricimonas 0.00 1 1 S 2528026 Maioricimonas rarisocia 0.00 2 0 C 666505 Phycisphaerae 0.00 2 0 O 666506 Phycisphaerales 0.00 2 0 F 666507 Phycisphaeraceae 0.00 2 0 G 2913022 Mucisphaera 0.00 2 2 S 2527982 Mucisphaera calidilacus 0.01 12 0 P 74201 Verrucomicrobiota 0.01 6 0 C 203494 Verrucomicrobiia 0.01 6 0 O 48461 Verrucomicrobiales 0.01 6 0 F 203557 Verrucomicrobiaceae 0.01 6 0 G 2735 Verrucomicrobium 0.01 6 0 G1 2625155 unclassified Verrucomicrobium 0.01 6 6 S 1882831 Verrucomicrobium sp. GAS474 0.00 4 0 C 414999 Opitutia 0.00 2 0 O 415000 Opitutales 0.00 2 2 F 134623 Opitutaceae 0.00 2 0 O 415001 Puniceicoccales 0.00 2 0 F 3056371 Coraliomargaritaceae 0.00 2 0 G 442430 Coraliomargarita 0.00 2 0 S 395922 Coraliomargarita akajimensis 0.00 2 2 S1 583355 Coraliomargarita akajimensis DSM 45221 0.00 2 0 P1 326457 Verrucomicrobiota incertae sedis 0.00 2 0 G 1541670 Methylacidimicrobium 0.00 2 2 G1 2730358 unclassified Methylacidimicrobium 0.01 5 0 P 134625 Kiritimatiellota 0.01 5 0 C 2907184 Tichowtungiia 0.01 5 0 O 2907185 Tichowtungiales 0.01 5 0 F 2907186 Tichowtungiaceae 0.01 5 0 G 2907187 Tichowtungia 0.01 5 5 S 2697043 Tichowtungia aerotolerans 0.06 56 12 P 200940 Thermodesulfobacteriota 0.02 18 0 C 3031449 Desulfovibrionia 0.02 18 0 O 213115 Desulfovibrionales 0.02 18 0 F 194924 Desulfovibrionaceae 0.01 12 12 G 2035811 Pseudodesulfovibrio 0.01 5 0 G 3126915 Taurinivorans 0.01 5 5 S 2787751 Taurinivorans muris 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.01 13 0 C 3031451 Desulfobulbia 0.01 13 0 O 3024411 Desulfobulbales 0.01 13 0 F 213121 Desulfobulbaceae 0.01 13 0 G 893 Desulfobulbus 0.01 13 13 S 1986146 Desulfobulbus oralis 0.01 11 0 C 3031651 Desulfuromonadia 0.01 11 1 O 69541 Desulfuromonadales 0.01 9 0 F 213421 Desulfuromonadaceae 0.01 9 9 G 890 Desulfuromonas 0.00 1 0 F 3031665 Geoalkalibacteraceae 0.00 1 1 G 392332 Geoalkalibacter 0.00 2 0 C 67799 Thermodesulfobacteria 0.00 2 1 O 188710 Thermodesulfobacteriales 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 0 G 2033601 Thermosulfuriphilus 0.00 1 1 S 1936021 Thermosulfuriphilus ammonigenes 0.03 27 0 D1 2323 Bacteria incertae sedis 0.03 27 0 D2 1783234 Bacteria candidate phyla 0.03 27 27 P 95818 Candidatus Saccharibacteria 0.03 24 0 P 203691 Spirochaetota 0.03 24 0 C 203692 Spirochaetia 0.03 24 0 O 136 Spirochaetales 0.02 17 0 F 2845253 Treponemataceae 0.02 17 0 G 157 Treponema 0.01 11 11 S 165 Treponema saccharophilum 0.01 5 5 S 162 Treponema phagedenis 0.00 1 1 S 409322 Treponema pedis 0.01 6 0 F 1643685 Borreliaceae 0.01 5 0 G 64895 Borreliella 0.00 3 3 S 100177 Borreliella lusitaniae 0.00 2 2 S 29519 Borreliella garinii 0.00 1 1 G 138 Borrelia 0.00 1 1 F 2791015 Sphaerochaetaceae 0.02 18 0 P 32066 Fusobacteriota 0.02 18 0 C 203490 Fusobacteriia 0.02 18 0 O 203491 Fusobacteriales 0.02 17 0 F 203492 Fusobacteriaceae 0.02 17 15 G 848 Fusobacterium 0.00 1 1 S 76857 Fusobacterium polymorphum 0.00 1 1 S 155615 Fusobacterium vincentii 0.00 1 0 F 1129771 Leptotrichiaceae 0.00 1 0 G 32067 Leptotrichia 0.00 1 1 S 157691 Leptotrichia shahii 0.01 11 0 P 2138240 Coprothermobacterota 0.01 11 0 C 2138243 Coprothermobacteria 0.01 11 0 O 2138246 Coprothermobacterales 0.01 11 0 F 2138247 Coprothermobacteraceae 0.01 11 0 G 68335 Coprothermobacter 0.01 11 0 S 35786 Coprothermobacter proteolyticus 0.01 11 11 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.01 10 0 P 57723 Acidobacteriota 0.01 9 0 C 533205 Holophagae 0.01 9 0 O 574975 Holophagales 0.01 9 0 F 574976 Holophagaceae 0.01 6 6 G 44675 Geothrix 0.00 2 0 G 3074468 Mesoterricola 0.00 2 2 S 2927980 Mesoterricola sediminis 0.00 1 0 G 35838 Holophaga 0.00 1 0 G1 89282 environmental samples 0.00 1 1 S 188475 uncultured Holophaga sp. 0.00 1 0 C 1813735 Vicinamibacteria 0.00 1 0 O 2910145 Vicinamibacterales 0.00 1 0 F 2211325 Vicinamibacteraceae 0.00 1 1 G 2004797 Luteitalea 0.01 7 0 P 2818505 Myxococcota 0.01 7 0 P1 3031711 Polyangia 0.01 6 0 O 3031712 Polyangiales 0.00 4 0 F 1055686 Sandaracinaceae 0.00 4 0 G 1055688 Sandaracinus 0.00 4 4 S 927083 Sandaracinus amylolyticus 0.00 2 0 F 49 Polyangiaceae 0.00 2 0 G 1882917 Pajaroellobacter 0.00 2 2 S 1882918 Pajaroellobacter abortibovis 0.00 1 0 O 3031713 Nannocystales 0.00 1 0 F 224463 Nannocystaceae 0.00 1 0 G 53 Nannocystis 0.00 1 1 S 2995304 Nannocystis poenicansa 0.00 3 0 P 40117 Nitrospirota 0.00 3 0 C 203693 Nitrospiria 0.00 3 0 O 189778 Nitrospirales 0.00 3 0 F 189779 Nitrospiraceae 0.00 3 3 G 1234 Nitrospira 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 0 O 191393 Deferribacterales 0.00 1 0 F 191394 Deferribacteraceae 0.00 1 0 G 53572 Deferribacter 0.00 1 0 S 197162 Deferribacter desulfuricans 0.00 1 1 S1 639282 Deferribacter desulfuricans SSM1 0.00 1 0 F 2945019 Geovibrionaceae 0.00 1 0 G 46200 Geovibrio 0.00 1 1 S 139438 Geovibrio thiophilus 0.00 2 0 P 3018035 Bdellovibrionota 0.00 2 0 C 1553900 Oligoflexia 0.00 2 0 O 2024973 Silvanigrellales 0.00 2 0 F 2024974 Silvanigrellaceae 0.00 2 0 G 2838409 Pigmentibacter 0.00 2 0 G1 2838410 unclassified Pigmentibacter 0.00 2 2 S 2976982 Pigmentibacter sp. JX0631 0.00 1 0 P 74152 Elusimicrobiota 0.00 1 0 C 447830 Endomicrobiia 0.00 1 0 O 1783344 Endomicrobiales 0.00 1 0 F 1783343 Endomicrobiaceae 0.00 1 0 G 1408194 Endomicrobium 0.00 1 1 S 1408204 Candidatus Endomicrobium trichonymphae 0.00 1 0 D 10239 Viruses 0.00 1 0 C 2840056 Naldaviricetes 0.00 1 0 O 2840070 Lefavirales 0.00 1 0 F 10442 Baculoviridae 0.00 1 0 G 558017 Betabaculovirus 0.00 1 0 S 3051997 Betabaculovirus chofumiferanae 0.00 1 1 S1 56947 Choristoneura fumiferana granulovirus