0.92 1502 1502 U 0 unclassified 99.08 161769 1 R 1 root 99.08 161768 0 R1 131567 cellular organisms 99.08 161768 27788 D 2 Bacteria 53.96 88102 748 P 1224 Pseudomonadota 42.14 68803 4463 C 1236 Gammaproteobacteria 31.10 50779 3563 O 91347 Enterobacterales 25.25 41219 4715 F 543 Enterobacteriaceae 12.61 20585 392 G 561 Escherichia 12.24 19982 18991 S 562 Escherichia coli 0.12 193 35 S1 83334 Escherichia coli O157:H7 0.08 124 124 S2 155864 Escherichia coli O157:H7 str. EDL933 0.02 28 28 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 6 6 S2 1328859 Escherichia coli O157:H7 str. SS17 0.10 167 167 S1 2079157 Escherichia coli O2:H1 0.07 120 120 S1 331112 Escherichia coli HS 0.06 102 102 S1 655817 Escherichia coli ABU 83972 0.06 91 91 S1 1322345 Escherichia coli ATCC 25922 0.05 84 84 S1 2874053 Escherichia coli O25:H1 0.05 79 79 S1 1446600 Escherichia coli O15:H18 0.05 79 79 S1 316435 Escherichia coli Nissle 1917 0.03 46 46 S1 244320 Escherichia coli O55:H7 0.01 11 11 S1 362663 Escherichia coli 536 0.00 8 0 S1 1038927 Escherichia coli O104:H4 0.00 8 8 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 6 6 S1 439855 Escherichia coli SMS-3-5 0.00 5 5 S1 376725 Escherichia coli O103:H2 0.07 114 114 S 1499973 Escherichia marmotae 0.04 67 67 S 208962 Escherichia albertii 0.01 24 24 S 564 Escherichia fergusonii 0.00 6 0 G1 2608889 unclassified Escherichia 0.00 6 6 S 2044467 Escherichia sp. E4742 3.64 5942 104 G 590 Salmonella 3.47 5658 1371 S 28901 Salmonella enterica 2.63 4287 222 S1 59201 Salmonella enterica subsp. enterica 0.65 1067 1067 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.55 896 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.50 820 820 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.03 49 49 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.02 27 27 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.37 602 602 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.29 476 30 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.26 430 430 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 16 16 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.22 366 366 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.12 193 127 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.03 46 46 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.01 20 20 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.10 168 168 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.05 80 80 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.04 60 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.04 60 60 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.03 49 49 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.02 35 35 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.02 32 11 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.01 21 21 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.01 14 14 S2 29474 Salmonella enterica subsp. enterica serovar California 0.01 9 9 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 8 8 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 3 3 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 2 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 2 2 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 2 2 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 2 2 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.11 180 10 S 54736 Salmonella bongori 0.10 170 170 S1 1299282 Salmonella bongori CFSAN000510 3.02 4924 1 G 547 Enterobacter 2.98 4861 3 G1 354276 Enterobacter cloacae complex 2.01 3283 3283 S 299767 Enterobacter ludwigii 0.79 1294 1285 S 158836 Enterobacter hormaechei 0.01 9 9 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.07 122 122 S 208224 Enterobacter kobei 0.04 72 72 S 61645 Enterobacter asburiae 0.03 50 5 S 550 Enterobacter cloacae 0.03 45 45 S1 336306 Enterobacter cloacae subsp. cloacae 0.02 35 35 S 1812935 Enterobacter roggenkampii 0.00 2 2 S 3029761 Enterobacter pasteurii 0.04 60 60 S 881260 Enterobacter bugandensis 0.00 2 0 G1 2608935 unclassified Enterobacter 0.00 2 2 S 2870346 Enterobacter sp. C2 1.39 2262 0 F1 2890311 Klebsiella/Raoultella group 1.37 2233 20 G 570 Klebsiella 1.08 1758 1485 S 573 Klebsiella pneumoniae 0.12 188 183 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 5 5 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.05 85 85 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.15 244 21 S 1463165 Klebsiella quasipneumoniae 0.14 223 223 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.04 60 21 S 244366 Klebsiella variicola 0.02 39 39 S1 640131 Klebsiella variicola At-22 0.03 50 50 S 548 Klebsiella aerogenes 0.03 48 48 S 1134687 Klebsiella michiganensis 0.02 30 0 G1 2608929 unclassified Klebsiella 0.02 25 25 S 2851540 Klebsiella sp. PL-2018 0.00 5 5 S 2829835 Klebsiella sp. P1954 0.01 13 13 S 2153354 Klebsiella huaxiensis 0.01 10 10 S 1259973 Klebsiella electrica 0.02 29 0 G 160674 Raoultella 0.01 22 22 S 54291 Raoultella ornithinolytica 0.00 6 6 S 575 Raoultella planticola 0.00 1 0 G1 2627600 unclassified Raoultella 0.00 1 1 S 2799495 Raoultella sp. XY-1 0.39 640 1 G 620 Shigella 0.38 615 615 S 623 Shigella flexneri 0.01 24 24 S 621 Shigella boydii 0.31 498 10 G 544 Citrobacter 0.25 410 0 G1 1344959 Citrobacter freundii complex 0.14 226 226 S 1639133 Citrobacter portucalensis 0.06 95 95 S 67828 Citrobacter gillenii 0.03 50 50 S 546 Citrobacter freundii 0.02 32 0 G2 2816438 unclassified Citrobacter freundii complex 0.02 31 31 S 1686385 Citrobacter sp. BIDMC108 0.00 1 1 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.00 7 7 S 67827 Citrobacter werkmanii 0.03 44 44 S 2971264 Citrobacter enshiensis 0.02 33 0 S 35703 Citrobacter amalonaticus 0.02 33 33 S1 1261127 Citrobacter amalonaticus Y19 0.00 1 0 G1 2644389 unclassified Citrobacter 0.00 1 1 S 2566012 Citrobacter sp. CF971 0.22 358 37 F1 36866 unclassified Enterobacteriaceae 0.11 184 184 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.07 116 116 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 15 15 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 3 3 S 2675782 Enterobacteriaceae endosymbiont of Donacia proxima 0.00 2 2 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.00 1 1 S 2675786 Enterobacteriaceae endosymbiont of Donacia thalassina 0.21 341 0 G 2815296 Jejubacter 0.21 341 341 S 2579935 Jejubacter calystegiae 0.17 278 0 G 1330547 Kosakonia 0.16 265 265 S 208223 Kosakonia cowanii 0.01 13 13 S 283686 Kosakonia radicincitans 0.17 278 0 F1 191675 Enterobacteriaceae incertae sedis 0.17 278 2 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.14 222 0 F3 84564 ant endosymbionts 0.08 136 4 G 203804 Candidatus Blochmanniella 0.07 118 57 G1 711328 unclassified Candidatus Blochmanniella 0.04 59 59 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 2 2 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 6 6 S 251538 Candidatus Blochmannia ocreatus 0.00 4 0 S 251535 Candidatus Blochmanniella vafra 0.00 4 4 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.00 4 4 S 251540 Candidatus Blochmannia vicinus 0.05 86 0 G 1699619 Candidatus Westeberhardia 0.05 86 86 S 1594731 Candidatus Westeberhardia cardiocondylae 0.02 32 0 F3 146507 aphid secondary symbionts 0.01 17 17 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.01 11 0 G 568988 Candidatus Regiella 0.01 11 0 G1 3077955 unclassified Candidatus Regiella 0.01 11 11 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 3 3 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 1 1 G 568987 Candidatus Hamiltonella 0.01 11 0 G 1302410 Candidatus Annandia 0.01 11 11 S 1302411 Candidatus Annandia adelgestsuga 0.00 5 0 G 472825 Candidatus Purcelliella 0.00 5 5 S 472834 Candidatus Purcelliella pentastirinorum 0.00 4 0 G 1906660 Candidatus Mikella 0.00 4 4 S 1778264 Candidatus Mikella endobia 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.08 125 0 G 409304 Candidatus Ishikawella 0.08 125 0 S 168169 Candidatus Ishikawella capsulata 0.08 125 125 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.04 71 0 G 2303321 Superficieibacter 0.04 71 0 G1 2645744 unclassified Superficieibacter 0.04 71 71 S 3031919 Superficieibacter sp. HKU1 0.03 51 0 G 1330545 Lelliottia 0.03 51 51 S 61646 Lelliottia amnigena 0.03 43 0 G 1177214 Candidatus Profftia 0.02 39 0 G1 2735709 unclassified Candidatus Profftia 0.02 39 39 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 3 3 S 1987921 Candidatus Profftia lariciata 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.03 41 0 G 1048757 Candidatus Moranella 0.03 41 41 S 1048758 Candidatus Moranella endobia 0.02 33 0 G 2726810 Scandinavium 0.02 33 33 S 1851514 Scandinavium goeteborgense 0.01 9 0 G 1335483 Shimwellia 0.01 9 9 S 563 Shimwellia blattae 0.00 7 0 G 702 Plesiomonas 0.00 7 7 S 703 Plesiomonas shigelloides 0.00 5 5 G 158483 Cedecea 0.00 5 1 G 413496 Cronobacter 0.00 3 3 S 413503 Cronobacter malonaticus 0.00 1 0 S 535744 Cronobacter universalis 0.00 1 1 S1 1074000 Cronobacter universalis NCTC 9529 0.00 2 0 G 83654 Leclercia 0.00 1 1 S 83655 Leclercia adecarboxylata 0.00 1 0 G1 2627398 unclassified Leclercia 0.00 1 1 S 2898725 Leclercia sp. G3L 0.00 2 0 G 1504576 Pseudocitrobacter 0.00 2 2 S 2891570 Pseudocitrobacter corydidari 0.00 1 0 G 1649295 Franconibacter 0.00 1 1 S 2047724 Franconibacter daqui 0.00 1 0 G 1081630 Candidatus Schneideria 0.00 1 1 S 1081631 Candidatus Schneideria nysicola 0.00 1 0 G 158851 Trabulsiella 0.00 1 1 S 379893 Trabulsiella odontotermitis 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 1.68 2741 0 F 2812006 Bruguierivoracaceae 1.68 2741 0 G 84565 Sodalis 1.41 2310 2310 S 2697027 Sodalis ligni 0.24 396 0 S 1486991 Candidatus Sodalis pierantonius 0.24 396 396 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.02 27 0 G1 2636512 unclassified Sodalis 0.02 27 27 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.00 8 8 S 1239307 Sodalis praecaptivus 0.75 1227 13 F 1903409 Erwiniaceae 0.62 1009 0 G 551 Erwinia 0.57 926 926 S 1922217 Candidatus Erwinia haradaeae 0.05 76 0 G1 2622719 unclassified Erwinia 0.05 75 75 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 3141543 Erwinia sp. HDF1-3R 0.00 4 4 S 65700 Erwinia tracheiphila 0.00 2 2 S 2681984 Erwinia sorbitola 0.00 1 1 S 79967 Erwinia pyrifoliae 0.09 146 49 G 53335 Pantoea 0.04 72 72 S 1235990 Candidatus Pantoea carbekii 0.01 18 18 S 59814 Pantoea dispersa 0.00 7 7 S 66269 Pantoea stewartii 0.03 45 0 G 32199 Buchnera 0.03 45 31 S 9 Buchnera aphidicola 0.00 6 6 S1 1241860 Buchnera aphidicola (Hyperomyzus lactucae) 0.00 5 5 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 1 1 S1 3075419 Buchnera aphidicola (Formosaphis micheliae) 0.00 1 1 S1 1241868 Buchnera aphidicola (Mollitrichosiphum nigrofasciatum) 0.00 1 1 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.01 10 0 G 2997349 Winslowiella 0.01 10 10 S 92490 Winslowiella toletana 0.00 3 0 G 51228 Wigglesworthia 0.00 3 0 S 51229 Wigglesworthia glossinidia 0.00 3 0 S1 36868 Wigglesworthia glossinidia endosymbiont of Glossina morsitans 0.00 3 3 S2 1142511 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 0.00 1 0 G 2100764 Mixta 0.00 1 1 S 1615494 Mixta intestinalis 0.59 963 4 F 1903411 Yersiniaceae 0.35 570 0 G 613 Serratia 0.21 346 344 S 138074 Serratia symbiotica 0.00 2 2 S1 3066236 Serratia symbiotica (Periphyllus acericola) 0.07 108 108 S 614 Serratia liquefaciens 0.03 42 42 S 61652 Serratia rubidaea 0.02 27 0 S 2338073 Serratia inhibens 0.02 27 27 S1 1154756 Serratia inhibens PRI-2C 0.02 26 0 S 82996 Serratia plymuthica 0.02 26 26 S1 1006598 Serratia plymuthica RVH1 0.01 21 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.01 21 21 S 2785630 Serratia sp. CMO1 0.22 361 0 G 629 Yersinia 0.19 316 1 G1 1649845 Yersinia pseudotuberculosis complex 0.19 315 12 S 632 Yersinia pestis 0.15 246 246 S1 748678 Yersinia pestis str. Pestoides B 0.02 27 27 S1 360102 Yersinia pestis Antiqua 0.01 24 24 S1 649716 Yersinia pestis Pestoides G 0.00 6 6 S1 1345701 Yersinia pestis 790 0.03 43 43 S 935293 Yersinia entomophaga 0.00 1 0 S 29483 Yersinia aldovae 0.00 1 1 S1 1453495 Yersinia aldovae 670-83 0.00 1 0 S 630 Yersinia enterocolitica 0.00 1 0 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 1 1 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.02 26 26 G 1927833 Candidatus Fukatsuia 0.00 2 0 G 34037 Rahnella 0.00 2 2 S 2816248 Rahnella bonaserana 0.35 569 22 F 1903414 Morganellaceae 0.13 210 0 G 581 Morganella 0.13 210 197 S 582 Morganella morganii 0.01 13 13 S1 180434 Morganella morganii subsp. morganii 0.07 115 7 G 637 Arsenophonus 0.03 57 0 G1 2627083 unclassified Arsenophonus 0.03 42 42 S 3041619 Arsenophonus sp. aPb 0.01 15 15 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.02 40 40 S 638 Arsenophonus nasoniae 0.01 9 9 S 634113 Candidatus Arsenophonus lipoptenae 0.00 2 2 S 2879119 Arsenophonus apicola 0.05 81 3 G 583 Proteus 0.05 76 76 S 584 Proteus mirabilis 0.00 1 1 S 585 Proteus vulgaris 0.00 1 0 S 1574161 Proteus terrae 0.00 1 1 S1 626774 Proteus terrae subsp. cibarius 0.04 59 57 G 29487 Photorhabdus 0.00 2 2 S 171438 Photorhabdus akhurstii 0.03 52 1 G 626 Xenorhabdus 0.03 41 0 S 40577 Xenorhabdus poinarii 0.03 41 41 S1 1354304 Xenorhabdus poinarii G6 0.00 6 6 S 351671 Xenorhabdus doucetiae 0.00 3 3 S 290110 Xenorhabdus budapestensis 0.00 1 0 S 40576 Xenorhabdus bovienii 0.00 1 1 S1 406818 Xenorhabdus bovienii SS-2004 0.02 30 1 G 586 Providencia 0.01 16 0 S 516075 Providencia sneebia 0.01 16 16 S1 1141660 Providencia sneebia DSM 19967 0.01 11 11 S 1715285 Candidatus Providencia siddallii 0.00 2 0 G1 2633465 unclassified Providencia 0.00 1 1 S 2949878 Providencia sp. PROV175 0.00 1 1 S 2939731 Providencia sp. PROV188 0.20 334 2 F 1903410 Pectobacteriaceae 0.12 196 52 G 204037 Dickeya 0.05 85 85 S 1089444 Dickeya solani 0.03 47 47 S 1778540 Dickeya fangzhongdai 0.01 9 0 S 204038 Dickeya dadantii 0.01 9 9 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 2 2 S 204042 Dickeya zeae 0.00 1 1 S 204039 Dickeya dianthicola 0.08 134 1 G 122277 Pectobacterium 0.06 105 83 S 1905730 Pectobacterium parmentieri 0.01 22 22 S1 561231 Pectobacterium parmentieri WPP163 0.01 12 12 S 180957 Pectobacterium brasiliense 0.01 9 9 S 2488639 Pectobacterium versatile 0.00 4 0 G1 2627739 unclassified Pectobacterium 0.00 4 4 S 2738983 Pectobacterium sp. PL64 0.00 3 3 S 2485124 Pectobacterium polonicum 0.00 1 0 G 71655 Brenneria 0.00 1 1 S 55213 Brenneria rubrifaciens 0.00 1 0 G 1082702 Lonsdalea 0.00 1 1 S 1172565 Lonsdalea populi 0.09 140 0 F 1903412 Hafniaceae 0.09 140 123 G 635 Edwardsiella 0.01 16 16 S 636 Edwardsiella tarda 0.00 1 1 S 67780 Edwardsiella ictaluri 0.01 19 0 F 3120698 Gallaecimonadaceae 0.01 19 0 G 745410 Gallaecimonas 0.01 19 19 S 3029055 Gallaecimonas kandeliae 0.00 4 0 F 1903416 Budviciaceae 0.00 2 0 G 82984 Pragia 0.00 2 2 S 82985 Pragia fontium 0.00 1 0 G 82980 Leminorella 0.00 1 1 S 158841 Leminorella richardii 0.00 1 0 G 2172100 Limnobaculum 0.00 1 1 S 2172103 Limnobaculum parvum 1.75 2850 0 O 135625 Pasteurellales 1.75 2850 17 F 712 Pasteurellaceae 1.68 2739 0 G 713 Actinobacillus 1.66 2708 0 S 718 Actinobacillus equuli 1.66 2708 2708 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.02 29 29 S 157339 Actinobacillus arthritidis 0.00 1 0 S 715 Actinobacillus pleuropneumoniae 0.00 1 0 S1 754344 Actinobacillus pleuropneumoniae serovar 6 0.00 1 1 S2 754256 Actinobacillus pleuropneumoniae serovar 6 str. Femo 0.00 1 0 S 67854 Actinobacillus succinogenes 0.00 1 1 S1 339671 Actinobacillus succinogenes 130Z 0.02 31 4 G 724 Haemophilus 0.02 26 26 S 729 Haemophilus parainfluenzae 0.00 1 1 S 726 Haemophilus haemolyticus 0.02 25 0 G 745 Pasteurella 0.02 25 25 S 747 Pasteurella multocida 0.01 15 0 G 75984 Mannheimia 0.01 10 10 S 85402 Mannheimia granulomatis 0.00 3 3 S 85404 Mannheimia varigena 0.00 2 2 S 75985 Mannheimia haemolytica 0.01 14 0 G 2899790 Mergibacter 0.01 14 14 S 221402 Mergibacter septicus 0.00 6 0 G 155493 Gallibacterium 0.00 6 6 S 750 Gallibacterium anatis 0.00 1 1 G 292486 Avibacterium 0.00 1 0 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 1.22 1985 0 O 135623 Vibrionales 1.22 1985 103 F 641 Vibrionaceae 0.98 1606 104 G 662 Vibrio 0.57 937 0 S 52443 Vibrio tapetis 0.57 937 937 S1 1671868 Vibrio tapetis subsp. tapetis 0.21 344 341 S 666 Vibrio cholerae 0.00 3 3 S1 1420885 Vibrio cholerae MS6 0.05 89 89 S 2572923 Vibrio taketomensis 0.05 76 2 G1 2614977 unclassified Vibrio 0.04 65 65 S 2661921 Vibrio sp. THAF191c 0.00 7 7 S 2661922 Vibrio sp. THAF191d 0.00 2 2 S 2819103 Vibrio sp. SCSIO 43009 0.01 16 0 G1 717610 Vibrio harveyi group 0.00 8 7 S 670 Vibrio parahaemolyticus 0.00 1 1 S1 745023 Vibrio parahaemolyticus 10329 0.00 4 4 S 669 Vibrio harveyi 0.00 3 3 S 663 Vibrio alginolyticus 0.00 1 1 S 680 Vibrio campbellii 0.01 15 0 G1 87806 environmental samples 0.01 15 15 S 114054 uncultured Vibrio sp. 0.01 9 1 S 672 Vibrio vulnificus 0.00 8 8 S1 914127 Vibrio vulnificus MO6-24/O 0.00 6 6 S 29495 Vibrio navarrensis 0.00 4 4 S 104609 Vibrio penaeicida 0.00 3 0 G1 1891919 Vibrio oreintalis group 0.00 3 3 S 29498 Vibrio tubiashii 0.00 1 0 S 28171 Vibrio aestuarianus 0.00 1 1 S1 1443279 Vibrio aestuarianus subsp. francensis 0.00 1 1 S 687 Vibrio gazogenes 0.00 1 0 S 55601 Vibrio anguillarum 0.00 1 1 S1 42323 Vibrio anguillarum serovar O1 0.17 272 3 G 657 Photobacterium 0.12 198 43 S 553611 Photobacterium leiognathi 0.09 155 155 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.04 68 0 S 38293 Photobacterium damselae 0.04 61 61 S1 38294 Photobacterium damselae subsp. piscicida 0.00 7 7 S1 85581 Photobacterium damselae subsp. damselae 0.00 3 3 G1 2628852 unclassified Photobacterium 0.00 4 0 G 511678 Aliivibrio 0.00 4 0 S 40269 Aliivibrio salmonicida 0.00 4 4 S1 316275 Aliivibrio salmonicida LFI1238 1.04 1697 0 O 135624 Aeromonadales 1.04 1695 198 F 84642 Aeromonadaceae 0.58 941 14 G 642 Aeromonas 0.44 713 713 S 654 Aeromonas veronii 0.06 100 100 S 652 Aeromonas schubertii 0.05 84 0 G1 257493 unclassified Aeromonas 0.05 81 81 S 2560029 Aeromonas sp. 2692-1 0.00 3 3 S 2920537 Aeromonas sp. 19NY04SH05-1 0.01 19 19 S 648 Aeromonas caviae 0.00 6 6 S 645 Aeromonas salmonicida 0.00 3 3 S 644 Aeromonas hydrophila 0.00 2 0 S 651 Aeromonas media 0.00 2 2 S1 1208104 Aeromonas media WS 0.31 503 0 G 225143 Oceanisphaera 0.31 503 503 S 1903694 Oceanisphaera avium 0.03 42 1 G 43947 Tolumonas 0.02 40 40 S 43948 Tolumonas auensis 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 6 0 G 347533 Zobellella 0.00 6 6 S 347534 Zobellella denitrificans 0.00 5 0 G 2802288 Dongshaea 0.00 5 5 S 2047966 Dongshaea marina 0.00 2 0 F 83763 Succinivibrionaceae 0.00 2 0 G 83770 Succinivibrio 0.00 2 2 S 83771 Succinivibrio dextrinosolvens 0.95 1546 13 O 135622 Alteromonadales 0.58 953 0 F 267888 Pseudoalteromonadaceae 0.56 917 0 G 2834759 Flocculibacter 0.56 917 917 S 2744479 Flocculibacter collagenilyticus 0.02 36 0 G 53246 Pseudoalteromonas 0.02 35 0 G1 194690 unclassified Pseudoalteromonas 0.02 31 31 S 2785910 Pseudoalteromonas sp. A41-2 0.00 3 3 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 1 S 2894202 Pseudoalteromonas sp. SCSIO 43095 0.00 1 1 S 882626 Pseudoalteromonas xiamenensis 0.21 336 1 F 72275 Alteromonadaceae 0.20 330 0 F1 2903219 Alteromonas/Salinimonas group 0.20 330 0 G 226 Alteromonas 0.20 330 0 G1 2614992 unclassified Alteromonas 0.20 330 330 S 2267264 Alteromonas sp. RKMC-009 0.00 2 2 G 261825 Agarivorans 0.00 1 0 G 89404 Glaciecola 0.00 1 0 S 300231 Glaciecola nitratireducens 0.00 1 1 S1 1085623 Glaciecola nitratireducens FR1064 0.00 1 1 G 1172191 Catenovulum 0.00 1 0 G 2661818 Saliniradius 0.00 1 1 S 2183582 Saliniradius amylolyticus 0.14 235 1 F 267890 Shewanellaceae 0.14 233 51 G 22 Shewanella 0.04 67 67 S 62322 Shewanella baltica 0.03 48 48 S 2018305 Shewanella bicestrii 0.02 36 36 S 712036 Shewanella dokdonensis 0.02 27 21 G1 196818 unclassified Shewanella 0.00 4 4 S 2601269 Shewanella sp. YLB-09 0.00 2 2 S 2746932 Shewanella sp. MTB7 0.00 3 3 S 2520507 Shewanella maritima 0.00 1 1 S 24 Shewanella putrefaciens 0.00 1 0 G 2547964 Parashewanella 0.00 1 1 S 342950 Parashewanella spongiae 0.00 8 0 F 267891 Moritellaceae 0.00 8 0 G 58050 Moritella 0.00 6 0 S 90736 Moritella marina 0.00 6 6 S1 1202962 Moritella marina ATCC 15381 0.00 2 2 G1 2637987 unclassified Moritella 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 2800384 Pseudidiomarina 0.00 1 1 S 1940690 Pseudidiomarina andamanensis 0.86 1412 0 O 135614 Lysobacterales 0.86 1404 6 F 32033 Lysobacteraceae 0.70 1137 1 G 338 Xanthomonas 0.70 1135 1135 S 29447 Xanthomonas albilineans 0.00 1 0 S 339 Xanthomonas campestris 0.00 1 1 S1 340 Xanthomonas campestris pv. campestris 0.08 125 118 G 40323 Stenotrophomonas 0.00 5 0 G1 995085 Stenotrophomonas maltophilia group 0.00 5 5 S 40324 Stenotrophomonas maltophilia 0.00 2 0 G1 196198 unclassified Stenotrophomonas 0.00 2 2 S 2682487 Stenotrophomonas sp. SXG-1 0.07 112 7 G 83618 Pseudoxanthomonas 0.06 92 0 G1 2645906 unclassified Pseudoxanthomonas 0.06 92 92 S 2969308 Pseudoxanthomonas sp. JBR18 0.01 12 0 S 415229 Pseudoxanthomonas spadix 0.01 12 12 S1 1045855 Pseudoxanthomonas spadix BD-a59 0.00 1 1 S 314722 Pseudoxanthomonas suwonensis 0.01 23 5 G 68 Lysobacter 0.01 15 15 S 2795387 Lysobacter arenosi 0.00 3 0 G1 2635362 unclassified Lysobacter 0.00 3 3 S 2904253 Lysobacter sp. 5GHs7-4 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.00 8 0 F 1775411 Rhodanobacteraceae 0.00 4 3 G 231454 Dyella 0.00 1 0 G1 2634549 unclassified Dyella 0.00 1 1 S 2501295 Dyella sp. M7H15-1 0.00 3 0 G 242605 Luteibacter 0.00 2 2 S 2911539 Luteibacter aegosomatissinici 0.00 1 1 S 564369 Luteibacter anthropi 0.00 1 0 G 1453544 Tahibacter 0.00 1 1 S 2976241 Tahibacter amnicola 0.82 1338 0 O 2887326 Moraxellales 0.82 1338 41 F 468 Moraxellaceae 0.63 1029 105 G 469 Acinetobacter 0.52 852 1 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.35 571 569 S 470 Acinetobacter baumannii 0.00 2 2 S1 1279013 Acinetobacter baumannii PR07 0.17 275 274 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.00 5 5 S 106654 Acinetobacter nosocomialis 0.02 25 21 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2563897 Acinetobacter sp. 10FS3-1 0.00 1 1 S 2919376 Acinetobacter sp. AOR07_HL 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.00 1 1 S 1827285 Acinetobacter sp. MYb10 0.01 24 24 S 202956 Acinetobacter towneri 0.01 20 20 S 40214 Acinetobacter johnsonii 0.00 2 2 S 28090 Acinetobacter lwoffii 0.00 1 1 S 29430 Acinetobacter haemolyticus 0.08 138 0 G 2824158 Aquirhabdus 0.08 138 138 S 2283318 Aquirhabdus parva 0.06 101 3 G 475 Moraxella 0.06 91 91 S 2904120 Moraxella nasibovis 0.00 5 5 S 90241 Moraxella lincolnii 0.00 1 1 S 480 Moraxella catarrhalis 0.00 1 0 G1 2685852 unclassified Moraxella 0.00 1 1 S 2904123 Moraxella sp. ZY210820 0.02 29 13 G 497 Psychrobacter 0.01 16 16 G1 196806 unclassified Psychrobacter 0.70 1143 0 O 72274 Pseudomonadales 0.68 1113 42 F 135621 Pseudomonadaceae 0.62 1010 206 G 286 Pseudomonas 0.15 237 0 G1 136845 Pseudomonas putida group 0.11 186 185 S 303 Pseudomonas putida 0.00 1 1 S1 1196325 Pseudomonas putida DOT-T1E 0.03 44 44 S 76759 Pseudomonas monteilii 0.00 7 7 S 78327 Pseudomonas mosselii 0.13 215 1 G1 196821 unclassified Pseudomonas 0.08 132 132 S 2025658 Pseudomonas sp. NS1(2017) 0.03 41 41 S 2726989 Pseudomonas sp. gcc21 0.01 21 21 S 1357074 Pseudomonas sp. LS44 0.00 4 4 S 2954088 Pseudomonas sp. FP2262 0.00 3 3 S 2954086 Pseudomonas sp. FP2196 0.00 2 2 S 2931382 Pseudomonas sp. PIA16 0.00 2 2 S 1649877 Pseudomonas sp. CCOS 191 0.00 2 2 S 2762896 Pseudomonas sp. MPDS 0.00 2 2 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 2662034 Pseudomonas sp. 13159349 0.00 1 1 S 2954080 Pseudomonas sp. FP1762 0.00 1 1 S 1207075 Pseudomonas sp. UW4 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 2871095 Pseudomonas sp. DR48 0.11 174 174 S 1198456 Pseudomonas guguanensis 0.07 113 0 G1 136841 Pseudomonas aeruginosa group 0.07 112 112 S 287 Pseudomonas aeruginosa 0.00 1 1 S 53406 Pseudomonas anguilliseptica 0.02 26 0 G1 136843 Pseudomonas fluorescens group 0.01 20 1 S 47883 Pseudomonas synxantha 0.01 19 19 S1 96901 Pseudomonas synxantha BG33R 0.00 5 5 S 47878 Pseudomonas azotoformans 0.00 1 1 S 298 Pseudomonas marginalis 0.01 23 23 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 4 4 S 158627 Pseudomonas graminis 0.00 4 4 S 321846 Pseudomonas simiae 0.00 2 2 S 2738125 Pseudomonas hefeiensis 0.00 2 2 S 2599595 Pseudomonas eucalypticola 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.00 1 1 S 157782 Pseudomonas parafulva 0.00 1 1 S 437900 Pseudomonas marincola 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 658629 Pseudomonas sessilinigenes 0.03 51 0 G 2901164 Stutzerimonas 0.03 51 0 G1 136846 Stutzerimonas stutzeri group 0.03 45 45 S 74829 Stutzerimonas balearica 0.00 6 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 6 6 S 316 Stutzerimonas stutzeri 0.00 4 0 G 1654787 Thiopseudomonas 0.00 4 4 S 1697053 Thiopseudomonas alkaliphila 0.00 4 0 G 2901189 Halopseudomonas 0.00 2 2 S 1434072 Halopseudomonas salegens 0.00 1 1 S 487184 Halopseudomonas xinjiangensis 0.00 1 1 S 797277 Halopseudomonas litoralis 0.00 2 0 F1 351 Azotobacter group 0.00 2 1 G 352 Azotobacter 0.00 1 0 S 353 Azotobacter chroococcum 0.00 1 1 S1 1328314 Azotobacter chroococcum NCIMB 8003 0.01 18 0 F 2887365 Marinobacteraceae 0.01 18 17 G 2742 Marinobacter 0.00 1 0 G1 83889 unclassified Marinobacter 0.00 1 1 S 2817656 Marinobacter sp. CA1 0.01 12 0 F 3085096 Ketobacteraceae 0.01 12 0 G 2025617 Ketobacter 0.01 12 12 S 1917421 Ketobacter alkanivorans 0.38 622 0 C1 118884 Gammaproteobacteria incertae sedis 0.37 608 0 G 1076625 Candidatus Steffania 0.37 608 608 S 1076626 Candidatus Steffania adelgidicola 0.01 10 0 G 198346 Candidatus Palibaumannia 0.01 10 10 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 2 0 C2 32036 sulfur-oxidizing symbionts 0.00 2 0 G 1541743 Candidatus Ruthturnera 0.00 1 0 S 386487 Candidatus Ruthturnera calyptogenae 0.00 1 1 S1 413404 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 0.00 1 1 S 2738852 Candidatus Ruthia endofausta 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 G 2738850 Candidatus Reidiella 0.00 1 1 S 2738883 Candidatus Reidiella endopervernicosa 0.24 384 0 O 135613 Chromatiales 0.22 365 2 F 1046 Chromatiaceae 0.08 130 3 G 85072 Allochromatium 0.08 127 127 S 553982 Allochromatium tepidum 0.06 96 0 G 67575 Rheinheimera 0.06 96 0 G1 115860 unclassified Rheinheimera 0.05 89 89 S 3019969 Rheinheimera sp. MM224 0.00 7 7 S 1763998 Rheinheimera sp. F8 0.05 81 0 G 156885 Thioflavicoccus 0.05 81 0 S 80679 Thioflavicoccus mobilis 0.05 81 81 S1 765912 Thioflavicoccus mobilis 8321 0.01 24 23 G 61593 Thiorhodovibrio 0.00 1 1 S 77007 Thiorhodovibrio winogradskyi 0.01 21 21 G 1056 Thiocapsa 0.00 8 0 G 2828366 Caldichromatium 0.00 8 8 S 2699430 Caldichromatium japonicum 0.00 2 2 G 1227 Nitrosococcus 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.01 19 0 F 72276 Ectothiorhodospiraceae 0.01 15 4 G 1335745 Spiribacter 0.00 8 0 G1 2629425 unclassified Spiribacter 0.00 8 8 S 2666185 Spiribacter sp. 2438 0.00 2 0 S 1335746 Spiribacter salinus 0.00 2 2 S1 1260251 Spiribacter salinus M19-40 0.00 1 1 S 2182432 Spiribacter halobius 0.00 2 1 G 106633 Thioalkalivibrio 0.00 1 0 G1 2621013 unclassified Thioalkalivibrio 0.00 1 1 S 396595 Thioalkalivibrio sp. K90mix 0.00 2 0 G 233099 Ectothiorhodosinus 0.00 2 2 S 233100 Ectothiorhodosinus mongolicus 0.12 191 5 O 135619 Oceanospirillales 0.08 135 0 F 135620 Oceanospirillaceae 0.04 63 0 G 459520 Neptuniibacter 0.04 63 63 S 651666 Neptuniibacter halophilus 0.03 43 1 G 28253 Marinomonas 0.03 42 42 S 2773454 Marinomonas algicola 0.01 24 24 G 515417 Amphritea 0.00 2 0 G 267849 Nitrincola 0.00 2 2 S 2614693 Nitrincola iocasae 0.00 1 0 G 75687 Neptunomonas 0.00 1 0 S 417574 Neptunomonas japonica 0.00 1 1 S1 1441457 Neptunomonas japonica JAMM 1380 0.00 1 0 G 187492 Thalassolituus 0.00 1 1 S 187493 Thalassolituus oleivorans 0.00 1 0 G 3018276 Aliamphritea 0.00 1 1 S 1524258 Aliamphritea ceti 0.01 23 0 F 2823145 Pleioneaceae 0.01 23 0 G 1502941 Pleionea 0.01 23 23 S 3070815 Pleionea litopenaei 0.01 17 0 F 28256 Halomonadaceae 0.01 11 0 F1 114403 Zymobacter group 0.01 9 0 G 235572 Candidatus Portiera 0.01 9 9 S 91844 Candidatus Portiera aleyrodidarum 0.00 2 0 G 114185 Candidatus Carsonella 0.00 2 2 S 114186 Candidatus Carsonella ruddii 0.00 3 0 G 2745 Halomonas 0.00 3 2 G1 2609666 unclassified Halomonas 0.00 1 1 S 2937790 Halomonas sp. ZZQ-149 0.00 2 1 G 204286 Cobetia 0.00 1 0 G1 2609414 unclassified Cobetia 0.00 1 1 S 2686360 Cobetia sp. L2A1 0.00 1 1 G 42054 Chromohalobacter 0.00 7 0 F 224379 Hahellaceae 0.00 7 7 G 158481 Hahella 0.00 2 0 F 255527 Saccharospirillaceae 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.00 1 0 G 1445504 Gynuella 0.00 1 0 S 1445505 Gynuella sunshinyii 0.00 1 1 S1 1445510 Gynuella sunshinyii YC6258 0.00 2 0 F 2066474 Endozoicomonadaceae 0.00 2 1 G 305899 Endozoicomonas 0.00 1 0 G1 2644528 unclassified Endozoicomonas 0.00 1 1 S 2918516 Endozoicomonas sp. SCSIO W0465 0.06 98 0 O 72273 Thiotrichales 0.05 74 40 F 135616 Piscirickettsiaceae 0.01 23 0 G 2781121 Thiosulfatimonas 0.01 23 23 S 2675054 Thiosulfatimonas sediminis 0.01 9 2 G 933 Thiomicrospira 0.00 7 0 G1 2643099 unclassified Thiomicrospira 0.00 7 7 S 3035472 Thiomicrospira sp. R3 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 0 G 40222 Methylophaga 0.00 1 1 S 754476 Methylophaga nitratireducenticrescens 0.01 10 0 F 135617 Thiotrichaceae 0.01 10 4 G 1030 Thiothrix 0.00 5 5 S 525917 Thiothrix lacustris 0.00 1 1 S 2735563 Thiothrix subterranea 0.01 10 0 F 2056687 Fastidiosibacteraceae 0.01 10 0 G 2056696 Cysteiniphilum 0.01 10 0 G1 2610889 unclassified Cysteiniphilum 0.01 10 10 S 2975055 Cysteiniphilum sp. QT6929 0.00 4 0 F 34064 Francisellaceae 0.00 4 3 G 262 Francisella 0.00 1 0 S 263 Francisella tularensis 0.00 1 1 S1 119856 Francisella tularensis subsp. tularensis 0.05 78 0 O 118969 Legionellales 0.03 51 0 F 444 Legionellaceae 0.03 51 0 G 445 Legionella 0.03 47 0 S 446 Legionella pneumophila 0.03 47 45 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 2 2 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 3 3 S 450 Legionella longbeachae 0.00 1 1 S 96232 Legionella lytica 0.02 27 15 F 118968 Coxiellaceae 0.01 11 1 G 254245 Aquicella 0.01 10 10 S 254247 Aquicella siphonis 0.00 1 0 G 59195 Rickettsiella 0.00 1 1 G1 2637345 unclassified Rickettsiella 0.04 68 0 O 1706369 Cellvibrionales 0.02 25 0 F 1706373 Microbulbiferaceae 0.02 25 1 G 48073 Microbulbifer 0.01 22 22 S 86173 Microbulbifer elongatus 0.00 1 1 S 435905 Microbulbifer celer 0.00 1 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 3145235 Microbulbifer sp. SAOS-129_SWC 0.01 19 0 F 1706375 Spongiibacteraceae 0.01 18 0 G 1084558 Oceanicoccus 0.01 18 18 S 716816 Oceanicoccus sagamiensis 0.00 1 1 G 630749 Spongiibacter 0.01 12 0 F 1706371 Cellvibrionaceae 0.01 12 1 G 10 Cellvibrio 0.01 11 4 G1 2624793 unclassified Cellvibrio 0.00 7 7 S 1987723 Cellvibrio sp. PSBB006 0.01 12 8 F 1706372 Halieaceae 0.00 2 0 G 393661 Congregibacter 0.00 2 0 S 393662 Congregibacter litoralis 0.00 2 2 S1 314285 Congregibacter litoralis KT71 0.00 1 0 G 1217416 Halioglobus 0.00 1 1 S 930805 Halioglobus japonicus 0.00 1 0 G 2847769 Aequoribacter 0.00 1 1 S 2518989 Aequoribacter fuscus 0.04 63 0 O 3084968 Thiohalomonadales 0.04 63 0 F 3084969 Thiohalomonadaceae 0.04 63 0 G 2034504 Sulfurivermis 0.04 63 63 S 1972068 Sulfurivermis fontis 0.02 30 0 O 742030 Salinisphaerales 0.02 30 0 F 742031 Salinisphaeraceae 0.02 30 0 G 180541 Salinisphaera 0.02 30 0 G1 2649847 unclassified Salinisphaera 0.02 30 30 S 2183911 Salinisphaera sp. LB1 0.01 19 0 O 135618 Methylococcales 0.01 14 1 F 403 Methylococcaceae 0.00 5 0 G 73778 Methylocaldum 0.00 5 5 S 1432792 Methylocaldum marinum 0.00 3 0 G 3135206 Candidatus Methylocalor 0.00 3 3 S 3108543 Candidatus Methylocalor cossyra 0.00 2 2 G 416 Methylomonas 0.00 2 0 G 429 Methylobacter 0.00 2 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2839024 Methylobacter sp. S3L5C 0.00 1 1 S 2911520 Methylobacter sp. YRD-M1 0.00 1 0 G 1295378 Methylogaea 0.00 1 1 S 1295382 Methylogaea oryzae 0.00 5 0 F 1486721 Methylothermaceae 0.00 5 4 G 1486720 Methylomarinovum 0.00 1 1 S 438856 Methylomarinovum caldicuralii 0.01 19 0 O 135615 Cardiobacteriales 0.01 19 0 F 868 Cardiobacteriaceae 0.01 12 0 G 2717 Cardiobacterium 0.01 10 0 G1 2648856 unclassified Cardiobacterium 0.01 10 10 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 2 2 S 2718 Cardiobacterium hominis 0.00 6 0 G 869 Dichelobacter 0.00 6 6 S 870 Dichelobacter nodosus 0.00 1 0 G 13275 Suttonella 0.00 1 0 G1 2908647 unclassified Suttonella 0.00 1 1 S 2908648 Suttonella sp. R2A3 0.01 11 0 O 1240482 Orbales 0.01 11 0 F 1240483 Orbaceae 0.01 10 0 G 2894762 Zophobihabitans 0.01 10 10 S 1635327 Zophobihabitans entericus 0.00 1 1 G 1193503 Gilliamella 0.00 3 0 O 1775403 Nevskiales 0.00 3 0 F 568386 Nevskiaceae 0.00 2 0 G 413435 Solimonas 0.00 2 0 G1 2637139 unclassified Solimonas 0.00 2 2 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 G 2893022 Flagellatimonas 0.00 1 1 S 2806210 Flagellatimonas centrodinii 0.00 2 0 O 1692040 Acidiferrobacterales 0.00 2 0 F 1692041 Acidiferrobacteraceae 0.00 1 0 G 1692042 Sulfurifustis 0.00 1 1 S 1675686 Sulfurifustis variabilis 0.00 1 0 G 1744881 Sulfuricaulis 0.00 1 1 S 1620215 Sulfuricaulis limicola 0.00 2 0 O 2975284 Candidatus Comchoanobacterales 0.00 2 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 2 0 G 2975286 Candidatus Comchoanobacter 0.00 2 2 S 2919598 Candidatus Comchoanobacter bicostacola 9.93 16218 107 C 28211 Alphaproteobacteria 9.17 14964 103 O 356 Hyphomicrobiales 8.07 13176 1085 F 119045 Methylobacteriaceae 6.47 10566 9076 G 407 Methylobacterium 0.31 507 507 S 410 Methylobacterium organophilum 0.29 476 0 S 31998 Methylobacterium radiotolerans 0.29 476 476 S1 426355 Methylobacterium radiotolerans JCM 2831 0.19 314 81 G1 2615210 unclassified Methylobacterium 0.13 213 213 S 426117 Methylobacterium sp. 4-46 0.01 10 10 S 2984843 Methylobacterium sp. FF17 0.01 9 9 S 2202826 Methylobacterium sp. 17Sr1-1 0.00 1 1 S 1479019 Methylobacterium sp. C1 0.07 121 121 S 1775910 Methylobacterium indicum 0.02 32 32 S 570505 Methylobacterium bullatum 0.01 23 23 S 2051553 Methylobacterium currus 0.00 7 7 S 270351 Methylobacterium aquaticum 0.00 5 5 S 334852 Methylobacterium oryzae 0.00 2 0 S 114616 Methylobacterium nodulans 0.00 2 2 S1 460265 Methylobacterium nodulans ORS 2060 0.00 1 1 S 269660 Methylobacterium brachiatum 0.00 1 1 S 2202825 Methylobacterium durans 0.00 1 1 S 2202827 Methylobacterium terrae 0.93 1525 1495 G 186650 Microvirga 0.02 29 29 S 1882682 Microvirga ossetica 0.00 1 1 S 864069 Microvirga lotononidis 0.46 744 0 F 118882 Brucellaceae 0.45 741 642 F1 2826938 Brucella/Ochrobactrum group 0.06 99 33 G 234 Brucella 0.02 32 32 S 370111 Brucella pseudintermedia 0.01 14 2 S 29459 Brucella melitensis 0.01 12 0 S1 645169 Brucella melitensis bv. 2 0.01 12 12 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.01 13 13 S 94625 Brucella intermedia 0.00 5 0 G1 2632610 unclassified Brucella 0.00 3 3 S 2886044 Brucella sp. JSBI001 0.00 2 2 S 2986424 Brucella sp. MAB-22 0.00 2 0 S 235 Brucella abortus 0.00 2 0 S1 1567505 Brucella abortus bv. 9 0.00 2 2 S2 520455 Brucella abortus bv. 9 str. C68 0.00 3 1 G 354349 Pseudochrobactrum 0.00 2 2 S 2834768 Pseudochrobactrum algeriensis 0.17 276 1 F 82115 Rhizobiaceae 0.08 134 79 F1 227290 Rhizobium/Agrobacterium group 0.03 51 9 G 379 Rhizobium 0.02 39 0 S 56730 Rhizobium gallicum 0.02 39 0 S1 142627 Rhizobium gallicum bv. gallicum 0.02 39 39 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.00 3 0 S 384 Rhizobium leguminosarum 0.00 3 3 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 3 0 G 357 Agrobacterium 0.00 3 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 3 3 S 358 Agrobacterium tumefaciens 0.00 1 1 G 1612611 Pararhizobium 0.05 82 2 G 34019 Liberibacter 0.05 77 0 S 309868 Candidatus Liberibacter americanus 0.05 77 77 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 2 0 S 556287 Candidatus Liberibacter solanacearum 0.00 2 2 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 1 S 34021 Candidatus Liberibacter asiaticus 0.04 59 0 F1 227292 Sinorhizobium/Ensifer group 0.04 59 0 G 28105 Sinorhizobium 0.04 59 5 S 382 Sinorhizobium meliloti 0.03 53 53 S1 1041157 Sinorhizobium meliloti WSM1022 0.00 1 1 S1 693982 Sinorhizobium meliloti AK83 0.15 237 1 F 2813035 Parvibaculaceae 0.14 235 0 G 256616 Parvibaculum 0.14 235 0 S 256618 Parvibaculum lavamentivorans 0.14 235 235 S1 402881 Parvibaculum lavamentivorans DS-1 0.00 1 0 G 2838250 Kaustia 0.00 1 1 S 2593653 Kaustia mangrovi 0.11 184 0 F 45401 Hyphomicrobiaceae 0.11 173 0 G 1068 Rhodomicrobium 0.11 173 173 S 2498452 Rhodomicrobium lacus 0.00 8 0 G 1484898 Methyloceanibacter 0.00 8 0 G1 2617503 unclassified Methyloceanibacter 0.00 8 8 S 2170729 Methyloceanibacter sp. wino2 0.00 2 1 G 81 Hyphomicrobium 0.00 1 0 G1 2619925 unclassified Hyphomicrobium 0.00 1 1 S 717785 Hyphomicrobium sp. MC1 0.00 1 0 G 119044 Filomicrobium 0.00 1 1 S 1608628 Candidatus Filomicrobium marinum 0.05 86 67 F 41294 Nitrobacteraceae 0.01 13 8 G 1073 Rhodopseudomonas 0.00 5 0 G1 2638247 unclassified Rhodopseudomonas 0.00 5 5 S 2991972 Rhodopseudomonas sp. P2A-2r 0.00 5 2 G 374 Bradyrhizobium 0.00 3 0 S 2992140 Bradyrhizobium barranii 0.00 3 3 S1 2823807 Bradyrhizobium barranii subsp. barranii 0.00 1 1 G 1395974 Tardiphaga 0.04 67 0 F 2831100 Boseaceae 0.04 67 60 G 85413 Bosea 0.00 4 4 S 3068632 Bosea beijingensis 0.00 3 3 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.01 24 4 F 335928 Xanthobacteraceae 0.01 17 17 G 556257 Pseudolabrys 0.00 2 0 G 99 Ancylobacter 0.00 2 2 S 223390 Ancylobacter polymorphus 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 2528964 Xanthobacter dioxanivorans 0.01 16 1 F 2821832 Stappiaceae 0.01 10 0 G 150830 Roseibium 0.01 10 0 G1 1936170 environmental samples 0.01 10 10 S 1936171 uncultured Roseibium sp. 0.00 4 4 G 152161 Stappia 0.00 1 0 G 1406135 Breoghania 0.00 1 0 G1 2624130 unclassified Breoghania 0.00 1 1 S 2065378 Breoghania sp. 0.01 12 0 F 69277 Phyllobacteriaceae 0.01 10 0 G 2911176 Aquibium 0.01 10 10 S 1670800 Aquibium oceanicum 0.00 1 0 G 31988 Aminobacter 0.00 1 0 G1 2644704 unclassified Aminobacter 0.00 1 1 S 2774562 Aminobacter sp. SR38 0.00 1 0 G 449972 Chelativorans 0.00 1 0 G1 2643807 unclassified Chelativorans 0.00 1 1 S 3028735 Chelativorans sp. AA-79 0.01 9 0 O1 119042 Hyphomicrobiales incertae sedis 0.01 9 0 G 212791 Enhydrobacter 0.01 9 0 G1 2632691 unclassified Enhydrobacter 0.01 9 9 S 1894999 Enhydrobacter sp. 0.00 8 0 F 2036754 Chelatococcaceae 0.00 8 8 G 28209 Chelatococcus 0.00 7 0 F 2831106 Devosiaceae 0.00 7 7 G 46913 Devosia 0.00 4 0 F 45404 Beijerinckiaceae 0.00 2 2 G 120652 Methylocella 0.00 2 0 G 1156568 Methylovirgula 0.00 2 0 G1 2640612 unclassified Methylovirgula 0.00 2 2 S 2293567 Methylovirgula sp. 4M-Z18 0.00 3 0 F 3149309 Methylopilaceae 0.00 3 0 G 2041902 Chenggangzhangella 0.00 3 3 S 1437009 Chenggangzhangella methanolivorans 0.00 3 0 F 2831090 Blastochloridaceae 0.00 3 3 G 59282 Blastochloris 0.00 2 0 F 3149308 Rhodoligotrophaceae 0.00 2 0 G 987053 Rhodoligotrophos 0.00 2 0 G1 2635862 unclassified Rhodoligotrophos 0.00 2 2 S 3069264 Rhodoligotrophos sp. CJ14 0.00 2 0 F 772 Bartonellaceae 0.00 2 1 G 773 Bartonella 0.00 1 1 S 803 Bartonella quintana 0.00 1 0 F 2843305 Phreatobacteraceae 0.00 1 0 G 1632780 Phreatobacter 0.00 1 1 S 1940610 Phreatobacter stygius 0.46 753 2 O 204441 Rhodospirillales 0.34 549 0 F 2844601 Stellaceae 0.34 549 0 G 93 Stella 0.34 549 549 S 94 Stella humosa 0.09 142 4 F 433 Acetobacteraceae 0.08 132 11 G 434 Acetobacter 0.07 120 120 S 2592655 Acetobacter vaccinii 0.00 1 1 S 65959 Acetobacter pomorum 0.00 1 0 G 2791118 Oecophyllibacter 0.00 1 1 S 2558360 Oecophyllibacter saccharovorans 0.00 1 1 G 1602345 Parasaccharibacter 0.00 1 0 G 1079922 Commensalibacter 0.00 1 1 S 2070537 Commensalibacter melissae 0.00 1 0 G 512381 Acidisoma 0.00 1 0 G1 2634065 unclassified Acidisoma 0.00 1 1 S 3040935 Acidisoma sp. PAMC 29798 0.00 1 0 G 504465 Rhodovastum 0.00 1 1 S 504468 Rhodovastum atsumiense 0.00 1 0 G 3027666 Aristophania 0.00 1 1 S 2697033 Aristophania vespae 0.03 55 0 F 2690195 Elioraeaceae 0.03 55 0 G 457933 Elioraea 0.03 55 55 S 2843330 Elioraea tepida 0.00 3 0 F 41295 Rhodospirillaceae 0.00 3 0 G 1263978 Candidatus Endolissoclinum 0.00 3 3 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 1 G 191 Azospirillum 0.00 1 0 F 2844864 Thalassobaculaceae 0.00 1 0 G 526215 Thalassobaculum 0.00 1 0 G1 2632499 unclassified Thalassobaculum 0.00 1 1 S 3100173 Thalassobaculum sp. OXR-137 0.10 170 9 O 204455 Rhodobacterales 0.10 156 19 F 31989 Paracoccaceae 0.07 117 99 G 265 Paracoccus 0.01 13 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 13 13 S 2589076 Paracoccus sp. AK26 0.00 2 2 S 2065379 Paracoccus jeotgali 0.00 1 0 S 34003 Paracoccus aminophilus 0.00 1 1 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 S 1945662 Paracoccus contaminans 0.00 1 1 S 659350 Paracoccus stylophorae 0.01 12 0 G 2846749 Pacificitalea 0.01 12 12 S 1411902 Pacificitalea manganoxidans 0.00 4 0 G 34008 Rhodovulum 0.00 4 0 G1 2631432 unclassified Rhodovulum 0.00 4 4 S 1564506 Rhodovulum sp. P5 0.00 2 0 G 1434002 Falsirhodobacter 0.00 2 2 S 2692330 Falsirhodobacter algicola 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 1 0 G 1617805 Amylibacter 0.00 1 0 G1 2623618 unclassified Amylibacter 0.00 1 1 S 3039851 Amylibacter sp. IMCC11727 0.00 5 1 F 2854170 Roseobacteraceae 0.00 1 0 G 60136 Sulfitobacter 0.00 1 0 G1 196795 unclassified Sulfitobacter 0.00 1 1 S 2070369 Sulfitobacter sp. JL08 0.00 1 0 G 336277 Roseicyclus 0.00 1 1 S 2161673 Roseicyclus marinus 0.00 1 0 G 92944 Ketogulonicigenium 0.00 1 1 S 92947 Ketogulonicigenium robustum 0.00 1 0 G 252301 Oceanicola 0.00 1 0 G1 2628660 unclassified Oceanicola 0.00 1 1 S 2587163 Oceanicola sp. D3 0.05 87 22 O 204457 Sphingomonadales 0.03 42 3 F 335929 Erythrobacteraceae 0.02 29 28 G 2800681 Aurantiacibacter 0.00 1 1 S 1648404 Aurantiacibacter atlanticus 0.00 6 1 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 5 0 G 1111 Porphyrobacter 0.00 5 0 G1 2683265 unclassified Porphyrobacter 0.00 5 5 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 1 0 G 361177 Altererythrobacter 0.00 1 0 G1 2614945 unclassified Altererythrobacter 0.00 1 1 S 2185142 Altererythrobacter sp. ZODW24 0.00 1 1 G 1855416 Qipengyuania 0.00 1 0 G 2676755 Croceibacterium 0.00 1 1 S 1267766 Croceibacterium atlanticum 0.00 1 0 G 2800686 Tsuneonella 0.00 1 0 G1 2800703 unclassified Tsuneonella 0.00 1 1 S 3042152 Tsuneonella sp. CC-YZS046 0.01 18 6 F 41297 Sphingomonadaceae 0.00 5 2 G 165696 Novosphingobium 0.00 2 2 S 13688 Novosphingobium capsulatum 0.00 1 0 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 3079861 Novosphingobium sp. ZN18A2 0.00 4 2 G 13687 Sphingomonas 0.00 1 1 S 1541170 Sphingomonas morindae 0.00 1 1 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 2 2 G 165697 Sphingopyxis 0.00 1 0 G 1763827 Hankyongella 0.00 1 1 S 1763828 Hankyongella ginsenosidimutans 0.00 5 0 F 2844881 Zymomonadaceae 0.00 5 0 G 541 Zymomonas 0.00 5 5 S 542 Zymomonas mobilis 0.03 48 0 O 2800060 Hyphomonadales 0.03 48 0 F 69657 Hyphomonadaceae 0.03 48 48 G 85 Hyphomonas 0.02 39 0 O 204458 Caulobacterales 0.02 39 2 F 76892 Caulobacteraceae 0.02 33 24 G 41275 Brevundimonas 0.01 9 0 G1 2622653 unclassified Brevundimonas 0.01 9 9 S 2560058 Brevundimonas sp. Bb-A 0.00 3 0 G 20 Phenylobacterium 0.00 3 0 S 284016 Phenylobacterium zucineum 0.00 3 3 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 0 G 75 Caulobacter 0.00 1 0 G1 2648921 unclassified Caulobacter 0.00 1 1 S 3016000 Caulobacter sp. NIBR1757 0.01 17 0 O 2066490 Emcibacterales 0.01 17 0 F 2066491 Emcibacteraceae 0.01 17 0 G 2943291 Pseudemcibacter 0.01 17 17 S 2857064 Pseudemcibacter aquimaris 0.01 15 1 O 766 Rickettsiales 0.00 7 1 F 775 Rickettsiaceae 0.00 6 0 F1 33988 Rickettsieae 0.00 4 0 G 780 Rickettsia 0.00 4 0 G1 114277 spotted fever group 0.00 4 0 S 781 Rickettsia conorii 0.00 4 4 S1 369822 Rickettsia conorii subsp. raoultii 0.00 2 0 G 2601645 Candidatus Sneabacter 0.00 2 2 S 2601646 Candidatus Sneabacter namystus 0.00 5 0 F 942 Anaplasmataceae 0.00 3 0 G 943 Ehrlichia 0.00 3 0 G1 106178 canis group 0.00 3 3 S 944 Ehrlichia canis 0.00 2 2 G 768 Anaplasma 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 1 0 O1 1699067 unclassified Rickettsiales 0.00 1 1 S 2486578 Rickettsiales endosymbiont of Stachyamoeba lipophora 0.00 7 0 O 1921002 Holosporales 0.00 5 0 F 44746 Holosporaceae 0.00 4 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 4 4 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 G 2601574 Candidatus Cytomitobacter 0.00 1 1 S 2066024 Candidatus Cytomitobacter primus 0.00 2 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 2 0 G 1521255 Candidatus Paracaedibacter 0.00 2 2 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 6 5 O 362534 Kordiimonadales 0.00 1 0 F 1549128 Temperatibacteraceae 0.00 1 0 G 1549129 Temperatibacter 0.00 1 1 S 1456591 Temperatibacter marinus 0.00 3 0 O 54526 Candidatus Pelagibacterales 0.00 3 0 F 1655514 Candidatus Pelagibacteraceae 0.00 3 1 G 198251 Candidatus Pelagibacter 0.00 2 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 2 2 S 1002672 Candidatus Pelagibacter sp. IMCC9063 0.00 1 0 O 255473 Parvularculales 0.00 1 0 F 255474 Parvularculaceae 0.00 1 0 G 1795639 Aquisalinus 0.00 1 1 S 1526572 Aquisalinus flavus 0.00 1 0 O 2800059 Maricaulales 0.00 1 1 F 2800061 Maricaulaceae 1.41 2306 482 C 28216 Betaproteobacteria 0.92 1510 93 O 80840 Burkholderiales 0.39 642 6 F 80864 Comamonadaceae 0.34 553 553 G 80865 Delftia 0.04 73 7 G 283 Comamonas 0.04 58 58 S 379895 Comamonas odontotermitis 0.00 8 8 S 2743470 Comamonas antarctica 0.00 3 3 G 34072 Variovorax 0.00 2 0 G 3051137 Paracidovorax 0.00 2 2 S 80867 Paracidovorax avenae 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 1 G 28065 Rhodoferax 0.00 1 0 G 52972 Polaromonas 0.00 1 1 G1 2638319 unclassified Polaromonas 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.19 307 16 F 506 Alcaligenaceae 0.16 262 255 G 222 Achromobacter 0.00 4 4 S 217204 Achromobacter insolitus 0.00 2 2 S 217203 Achromobacter spanius 0.00 1 1 S 1389922 Achromobacter mucicolens 0.01 21 0 G 1472344 Basilea 0.01 21 0 S 1472345 Basilea psittacipulmonis 0.01 21 21 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 3 0 G 517 Bordetella 0.00 3 3 S 519 Bordetella parapertussis 0.00 2 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 1 1 G1 2626614 unclassified Pigmentiphaga 0.00 1 1 G 2987599 Pollutimonas 0.00 1 0 G 1921582 Orrella 0.00 1 1 S 2163011 Orrella marina 0.00 1 0 G 305976 Pusillimonas 0.00 1 0 G1 2640016 unclassified Pusillimonas 0.00 1 1 S 1007105 Pusillimonas sp. T7-7 0.18 292 8 F 119060 Burkholderiaceae 0.06 98 0 G 48736 Ralstonia 0.06 98 0 G1 3116862 Ralstonia solanacearum species complex 0.06 98 98 S 305 Ralstonia solanacearum 0.04 68 8 G 32008 Burkholderia 0.02 33 0 G1 111527 pseudomallei group 0.01 21 1 S 57975 Burkholderia thailandensis 0.01 20 20 S1 1249664 Burkholderia thailandensis 34 0.01 12 12 S 28450 Burkholderia pseudomallei 0.01 18 1 G1 87882 Burkholderia cepacia complex 0.00 7 7 S 488447 Burkholderia contaminans 0.00 4 4 S 87883 Burkholderia multivorans 0.00 3 3 S 152500 Burkholderia dolosa 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 1 S 95485 Burkholderia stabilis 0.00 1 1 S 292 Burkholderia cepacia 0.01 9 0 G1 2613784 unclassified Burkholderia 0.01 9 9 S 1494466 Burkholderia sp. FERM BP-3421 0.03 47 0 G 2038280 Robbsia 0.03 47 0 G1 2636574 unclassified Robbsia 0.03 47 47 S 3149231 Robbsia sp. KACC 23696 0.02 27 0 G 106589 Cupriavidus 0.01 24 24 S 164546 Cupriavidus taiwanensis 0.00 2 2 S 119219 Cupriavidus metallidurans 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.01 17 0 G 1822464 Paraburkholderia 0.01 15 15 S 2571748 Paraburkholderia acidisoli 0.00 2 2 S 75105 Paraburkholderia caribensis 0.01 13 0 G 47670 Lautropia 0.01 13 13 S 47671 Lautropia mirabilis 0.01 10 0 G 2571159 Mycetohabitans 0.01 10 10 S 417203 Mycetohabitans endofungorum 0.00 2 0 G 44013 Polynucleobacter 0.00 2 2 S 576610 Polynucleobacter necessarius 0.00 1 1 G 93217 Pandoraea 0.00 1 1 G 1810868 Mycoavidus 0.10 160 22 F 75682 Oxalobacteraceae 0.05 76 74 G 29580 Janthinobacterium 0.00 1 1 S 29581 Janthinobacterium lividum 0.00 1 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 3065910 Janthinobacterium sp. J1-1 0.03 51 5 G 963 Herbaspirillum 0.03 46 46 S 863372 Herbaspirillum huttiense 0.01 10 3 F1 2895353 Telluria group 0.00 7 1 G 149698 Massilia 0.00 6 0 G1 2609279 unclassified Massilia 0.00 5 5 S 3126507 Massilia sp. W12 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.01 9 1 F 2975441 Sphaerotilaceae 0.00 5 2 G 93681 Roseateles 0.00 3 3 S 76731 Roseateles depolymerans 0.00 3 0 G 34102 Sphaerotilus 0.00 2 2 S 2914710 Sphaerotilus microaerophilus 0.00 1 1 S 639200 Sphaerotilus sulfidivorans 0.00 7 0 O1 224471 Burkholderiales genera incertae sedis 0.00 6 5 G 32012 Thiomonas 0.00 1 1 S 926 Thiomonas intermedia 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.14 226 3 O 32003 Nitrosomonadales 0.13 212 2 F 32011 Methylophilaceae 0.09 147 0 G 1679002 Candidatus Methylopumilus 0.09 147 147 S 1581680 Candidatus Methylopumilus turicensis 0.02 32 0 G 16 Methylophilus 0.02 32 32 S 17 Methylophilus methylotrophus 0.01 19 0 G 2872156 Methyloradius 0.01 19 19 S 2778876 Methyloradius palustris 0.01 12 0 G 359407 Methylotenera 0.01 12 0 S 359408 Methylotenera mobilis 0.01 12 12 S1 583345 Methylotenera mobilis JLW8 0.00 5 0 F 2772226 Sulfuricellaceae 0.00 5 5 G 1778653 Sulfuriferula 0.00 3 0 F 2008790 Thiobacillaceae 0.00 3 0 G 1938335 Sulfuritortus 0.00 3 3 S 1914471 Sulfuritortus calidifontis 0.00 3 0 F 2008793 Sterolibacteriaceae 0.00 3 0 G 3050898 Sulfuricystis 0.00 3 3 S 2211108 Sulfuricystis multivorans 0.03 52 2 O 206351 Neisseriales 0.02 39 20 F 481 Neisseriaceae 0.01 9 0 G 2593687 Aquella 0.01 9 9 S 2067065 Aquella oligotrophica 0.00 8 3 G 482 Neisseria 0.00 2 2 S 487 Neisseria meningitidis 0.00 1 1 S 486 Neisseria lactamica 0.00 1 0 G1 2623750 unclassified Neisseria 0.00 1 1 S 2912675 Neisseria sp. Dent CA1/247 0.00 1 1 S 1470200 Neisseria arctica 0.00 1 0 G 32257 Kingella 0.00 1 1 S 505 Kingella oralis 0.00 1 0 G 334107 Conchiformibius 0.00 1 1 S 153493 Conchiformibius steedae 0.00 6 6 F 2897177 Chitinibacteraceae 0.00 5 0 F 2897176 Aquaspirillaceae 0.00 3 0 G 168470 Laribacter 0.00 3 1 S 168471 Laribacter hongkongensis 0.00 2 2 S1 557598 Laribacter hongkongensis HLHK9 0.00 1 0 G 187 Aquaspirillum 0.00 1 0 G1 2620219 unclassified Aquaspirillum 0.00 1 1 S 1938604 Aquaspirillum sp. LM1 0.00 1 0 G 57479 Microvirgula 0.00 1 1 S 57480 Microvirgula aerodenitrificans 0.02 34 0 C1 119066 Betaproteobacteria incertae sedis 0.01 17 0 G 1301080 Candidatus Nasuia 0.01 17 17 S 1160784 Candidatus Nasuia deltocephalinicola 0.01 17 0 G 1381133 Candidatus Profftella 0.01 17 17 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.00 2 0 O 206389 Rhodocyclales 0.00 2 1 F 2008794 Zoogloeaceae 0.00 1 0 G 2891294 Nitrogeniibacter 0.00 1 1 S 2815343 Nitrogeniibacter aestuarii 0.02 26 0 C 1807140 Acidithiobacillia 0.02 26 0 O 225057 Acidithiobacillales 0.02 26 0 F 225058 Acidithiobacillaceae 0.02 26 26 G 119977 Acidithiobacillus 0.00 1 0 C 580370 Zetaproteobacteria 0.00 1 0 O 580371 Mariprofundales 0.00 1 0 F 580372 Mariprofundaceae 0.00 1 1 G 377315 Mariprofundus 23.99 39174 81 D1 1783272 Terrabacteria group 21.63 35317 48 P 1239 Bacillota 21.49 35094 542 C 91061 Bacilli 19.73 32214 55 O 186826 Lactobacillales 19.11 31197 1 F 81852 Enterococcaceae 19.11 31196 1 G 1350 Enterococcus 19.05 31102 31102 S 1351 Enterococcus faecalis 0.05 79 79 S 1352 Enterococcus faecium 0.00 8 8 S 1354 Enterococcus hirae 0.00 3 3 S 44008 Enterococcus cecorum 0.00 2 2 S 1353 Enterococcus gallinarum 0.00 1 1 S 37734 Enterococcus casseliflavus 0.32 524 0 F 1300 Streptococcaceae 0.31 511 266 G 1301 Streptococcus 0.08 133 115 S 1308 Streptococcus thermophilus 0.01 11 11 S1 767463 Streptococcus thermophilus ND03 0.00 7 7 S1 322159 Streptococcus thermophilus LMD-9 0.01 24 24 S 1314 Streptococcus pyogenes 0.01 12 9 S 1311 Streptococcus agalactiae 0.00 3 3 S1 1203670 Streptococcus agalactiae GD201008-001 0.01 12 11 S 1313 Streptococcus pneumoniae 0.00 1 1 S1 1159083 Streptococcus pneumoniae PCS8235 0.01 12 0 G1 671232 Streptococcus anginosus group 0.01 11 11 S 1328 Streptococcus anginosus 0.00 1 1 S 1338 Streptococcus intermedius 0.00 8 8 S 2490633 Streptococcus periodonticum 0.00 8 8 S 2021971 Streptococcus respiraculi 0.00 8 8 S 68892 Streptococcus infantis 0.00 5 5 S 1310 Streptococcus sobrinus 0.00 3 3 S 1345 Streptococcus ferus 0.00 3 2 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2664091 Streptococcus sp. zg-86 0.00 3 0 G1 119603 Streptococcus dysgalactiae group 0.00 3 0 S 1334 Streptococcus dysgalactiae 0.00 2 2 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 1 1 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 2 2 S 1304 Streptococcus salivarius 0.00 2 2 S 82348 Streptococcus pluranimalium 0.00 2 2 S 1341 Streptococcus ratti 0.00 1 1 S 102886 Streptococcus didelphis 0.00 1 1 S 1811193 Streptococcus pantholopis 0.00 1 1 S 1348 Streptococcus parauberis 0.00 1 1 S 1335 Streptococcus equinus 0.00 1 1 S 1111760 Streptococcus troglodytae 0.00 1 1 S 400065 Streptococcus merionis 0.00 1 1 S 1307 Streptococcus suis 0.00 1 1 S 1305 Streptococcus sanguinis 0.01 13 0 G 1357 Lactococcus 0.01 13 13 S 1359 Lactococcus cremoris 0.25 402 19 F 33958 Lactobacillaceae 0.09 155 4 G 1578 Lactobacillus 0.05 80 80 S 147802 Lactobacillus iners 0.03 43 31 S 1584 Lactobacillus delbrueckii 0.00 8 4 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 3 3 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 1 1 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.00 4 4 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.01 22 22 S 47770 Lactobacillus crispatus 0.00 2 2 S 83683 Lactobacillus amylolyticus 0.00 1 1 S 1579 Lactobacillus acidophilus 0.00 1 1 S 33959 Lactobacillus johnsonii 0.00 1 1 S 151781 Lactobacillus intestinalis 0.00 1 1 S 267818 Lactobacillus kefiranofaciens 0.06 99 84 G 46255 Weissella 0.00 7 7 S 137591 Weissella cibaria 0.00 3 3 S 1583 Weissella confusa 0.00 2 2 S 155866 Weissella soli 0.00 1 1 S 1249 Weissella paramesenteroides 0.00 1 1 S 165096 Weissella koreensis 0.00 1 1 S 1162633 Weissella diestrammenae 0.02 35 0 G 2930384 Periweissella 0.02 35 35 S 2506420 Periweissella cryptocerci 0.02 32 32 G 1243 Leuconostoc 0.01 10 0 G 2767842 Lactiplantibacillus 0.00 8 8 S 1589 Lactiplantibacillus pentosus 0.00 2 1 S 1590 Lactiplantibacillus plantarum 0.00 1 1 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.01 10 2 G 2767887 Ligilactobacillus 0.00 3 3 S 1605 Ligilactobacillus animalis 0.00 2 0 S 1622 Ligilactobacillus murinus 0.00 2 2 S1 1235801 Ligilactobacillus murinus ASF361 0.00 2 1 S 1624 Ligilactobacillus salivarius 0.00 1 1 S1 1194971 Ligilactobacillus salivarius str. Ren 0.00 1 1 S 1606 Ligilactobacillus aviarius 0.01 10 10 G 2767893 Lentilactobacillus 0.00 7 1 G 2742598 Limosilactobacillus 0.00 5 5 S 1598 Limosilactobacillus reuteri 0.00 1 1 S 1613 Limosilactobacillus fermentum 0.00 7 0 G 2767881 Fructilactobacillus 0.00 6 6 S 1625 Fructilactobacillus sanfranciscensis 0.00 1 1 S 2940300 Fructilactobacillus hinvesii 0.00 6 0 G 2759736 Lacticaseibacillus 0.00 4 3 S 1597 Lacticaseibacillus paracasei 0.00 1 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 1 1 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.00 1 1 S 3025672 Lacticaseibacillus pabuli 0.00 5 0 G 2767886 Levilactobacillus 0.00 5 5 S 1580 Levilactobacillus brevis 0.00 3 3 G 2767877 Apilactobacillus 0.00 1 1 G 46254 Oenococcus 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.00 1 0 G 2767885 Latilactobacillus 0.00 1 1 S 1599 Latilactobacillus sakei 0.00 1 1 G 2767890 Paucilactobacillus 0.01 24 0 F 186827 Aerococcaceae 0.01 14 0 G 2862144 Ruoffia 0.01 14 14 S 87458 Ruoffia tabacinasalis 0.00 6 5 G 1375 Aerococcus 0.00 1 1 S 2976809 Aerococcus loyolae 0.00 2 0 G 46123 Abiotrophia 0.00 2 2 S 46125 Abiotrophia defectiva 0.00 2 0 G 66831 Facklamia 0.00 2 2 S 178214 Facklamia hominis 0.01 12 0 F 186828 Carnobacteriaceae 0.01 9 0 G 117563 Granulicatella 0.01 9 9 S 46124 Granulicatella adiacens 0.00 2 0 G 82800 Desemzia 0.00 2 2 S 82801 Desemzia incerta 0.00 1 0 G 2747 Carnobacterium 0.00 1 1 S 2751 Carnobacterium maltaromaticum 1.43 2338 70 O 1385 Bacillales 0.95 1555 3 F 90964 Staphylococcaceae 0.95 1552 233 G 1279 Staphylococcus 0.73 1188 1177 S 1280 Staphylococcus aureus 0.00 6 6 S1 1229492 Staphylococcus aureus 08BA02176 0.00 5 5 S1 273036 Staphylococcus aureus RF122 0.03 41 37 S 29388 Staphylococcus capitis 0.00 4 4 S1 74703 Staphylococcus capitis subsp. urealyticus 0.01 17 17 S 70255 Staphylococcus condimenti 0.01 15 11 S 1282 Staphylococcus epidermidis 0.00 4 4 S1 176280 Staphylococcus epidermidis ATCC 12228 0.01 11 11 S 1283 Staphylococcus haemolyticus 0.01 11 0 G1 2815305 Staphylococcus intermedius group 0.00 8 8 S 283734 Staphylococcus pseudintermedius 0.00 3 3 S 53344 Staphylococcus delphini 0.01 9 9 S 1290 Staphylococcus hominis 0.00 6 6 S 170573 Staphylococcus pettenkoferi 0.00 6 6 S 28035 Staphylococcus lugdunensis 0.00 3 3 S 1286 Staphylococcus simulans 0.00 3 3 S 1292 Staphylococcus warneri 0.00 2 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2989772 Staphylococcus sp. IVB6246 0.00 1 1 S 2929481 Staphylococcus sp. IVB6181 0.00 2 2 S 155085 Staphylococcus lutrae 0.00 1 1 S 246432 Staphylococcus equorum 0.00 1 1 S 29378 Staphylococcus arlettae 0.00 1 1 S 985762 Staphylococcus agnetis 0.00 1 1 S 46127 Staphylococcus felis 0.00 1 1 S 46126 Staphylococcus chromogenes 0.37 602 41 F 186817 Bacillaceae 0.18 299 10 G 1386 Bacillus 0.10 167 2 G1 653685 Bacillus subtilis group 0.08 136 1 G2 1938374 Bacillus amyloliquefaciens group 0.07 122 121 S 492670 Bacillus velezensis 0.00 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.01 12 12 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S 659243 Bacillus siamensis 0.01 24 21 S 1423 Bacillus subtilis 0.00 2 2 S1 86029 Bacillus subtilis subsp. natto 0.00 1 1 S1 135461 Bacillus subtilis subsp. subtilis 0.00 3 2 S 1452 Bacillus atrophaeus 0.00 1 1 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 2 2 S 483913 Bacillus inaquosorum 0.04 58 2 G1 86661 Bacillus cereus group 0.02 27 27 S 1392 Bacillus anthracis 0.01 11 10 S 1396 Bacillus cereus 0.00 1 1 S1 572264 Bacillus cereus 03BB102 0.01 11 6 S 1428 Bacillus thuringiensis 0.00 3 3 S1 180850 Bacillus thuringiensis serovar indiana 0.00 1 1 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 1 1 S1 1217737 Bacillus thuringiensis HD-789 0.00 3 0 G2 2750818 unclassified Bacillus cereus group 0.00 3 3 S 1892404 Bacillus sp. ABP14 0.00 2 2 S 1405 Bacillus mycoides 0.00 2 2 S 64104 Bacillus pseudomycoides 0.02 34 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.02 25 25 S 2841656 Bacillus sp. ZHX3 0.00 3 3 S 3229854 Bacillus sp. Bos-x628 0.00 3 3 S 467262 Bacillus sp. T3 0.00 2 2 S 2709784 Bacillus sp. KH172YL63 0.00 1 1 S 3077323 Bacillus sp. SI2 0.01 22 22 S 561879 Bacillus safensis 0.00 3 3 S 1983719 Bacillus shivajii 0.00 3 0 G1 1792192 Bacillus altitudinis complex 0.00 3 3 S 293387 Bacillus altitudinis 0.00 1 1 S 2728853 Bacillus fonticola 0.00 1 1 S 1408 Bacillus pumilus 0.04 67 57 G 2837504 Heyndrickxia 0.01 10 10 S 1398 Heyndrickxia coagulans 0.03 53 53 G 1055323 Aeribacillus 0.02 25 5 G 400634 Lysinibacillus 0.01 13 13 S 2086577 Lysinibacillus timonensis 0.00 5 5 S 2590012 Lysinibacillus agricola 0.00 1 0 S 1421 Lysinibacillus sphaericus 0.00 1 1 S1 444177 Lysinibacillus sphaericus C3-41 0.00 1 0 G1 2636778 unclassified Lysinibacillus 0.00 1 1 S 2954544 Lysinibacillus sp. FSL W7-1291 0.01 16 0 G 2005375 Alkalicoccus 0.01 16 16 S 1667239 Alkalicoccus halolimnae 0.01 15 0 G 2800373 Priestia 0.01 14 14 S 1404 Priestia megaterium 0.00 1 1 S 412384 Priestia aryabhattai 0.01 14 0 G 2893056 Halalkalibacter 0.01 14 14 S 199441 Halalkalibacter krulwichiae 0.01 13 13 G 2893057 Shouchella 0.01 12 0 G 84406 Virgibacillus 0.01 12 12 S 447199 Virgibacillus salarius 0.01 10 0 G 175304 Lentibacillus 0.01 10 10 S 1472767 Lentibacillus amyloliquefaciens 0.01 9 1 G 2685905 Salicibibacter 0.00 8 8 S 2743001 Salicibibacter cibi 0.00 5 0 G 2837508 Rossellomorea 0.00 3 3 S 189381 Rossellomorea marisflavi 0.00 2 2 S 218284 Rossellomorea vietnamensis 0.00 4 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 4 0 S 86665 Halalkalibacterium halodurans 0.00 4 4 S1 272558 Halalkalibacterium halodurans C-125 0.00 3 0 G 45667 Halobacillus 0.00 2 2 S 2932258 Halobacillus shinanisalinarum 0.00 1 1 S 1570 Halobacillus halophilus 0.00 3 0 G 2675230 Cytobacillus 0.00 2 2 S 1399 Cytobacillus firmus 0.00 1 1 S 665099 Cytobacillus oceanisediminis 0.00 2 1 G 129337 Geobacillus 0.00 1 1 S 1921421 Geobacillus genomosp. 3 0.00 2 2 G 182709 Oceanobacillus 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 0 G 1906945 Parageobacillus 0.00 1 1 S 1426 Parageobacillus thermoglucosidasius 0.00 1 0 G 2837506 Niallia 0.00 1 0 G1 2837522 unclassified Niallia 0.00 1 1 S 3082444 Niallia sp. XMNu-256 0.00 1 0 G 1433999 Domibacillus 0.00 1 0 G1 2632383 unclassified Domibacillus 0.00 1 1 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 G1 2639704 unclassified Anoxybacillus 0.00 1 0 G 2675233 Metabacillus 0.00 1 1 G1 2675274 unclassified Metabacillus 0.00 1 0 G 482460 Sediminibacillus 0.00 1 1 S 2729421 Sediminibacillus dalangtanensis 0.00 1 0 G 379065 Caldalkalibacillus 0.00 1 0 S 296745 Caldalkalibacillus thermarum 0.00 1 1 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.00 1 0 G 289201 Pontibacillus 0.00 1 1 S 265426 Pontibacillus chungwhensis 0.03 45 0 F 186820 Listeriaceae 0.03 43 2 G 1637 Listeria 0.02 35 0 S 1638 Listeria ivanovii 0.02 35 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.02 35 35 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 3 3 S 1639 Listeria monocytogenes 0.00 2 0 G1 2642072 unclassified Listeria 0.00 2 2 S 1844999 Listeria sp. PSOL-1 0.00 1 1 S 1497681 Listeria newyorkensis 0.00 2 0 G 2755 Brochothrix 0.00 2 2 S 2756 Brochothrix thermosphacta 0.01 23 0 F 186818 Planococcaceae 0.01 20 0 G 160795 Ureibacillus 0.01 20 20 G1 2638520 unclassified Ureibacillus 0.00 1 1 G 1372 Planococcus 0.00 1 0 G 1569 Sporosarcina 0.00 1 1 G1 2647733 unclassified Sporosarcina 0.00 1 1 G 648802 Rummeliibacillus 0.01 22 0 F 186822 Paenibacillaceae 0.01 16 3 G 44249 Paenibacillus 0.00 7 0 G1 185978 unclassified Paenibacillus 0.00 4 4 S 715179 Paenibacillus sp. sptzw28 0.00 1 1 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 1 1 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 1 1 S 2921361 Paenibacillus sp. FSL E2-0178 0.00 5 5 S 1406 Paenibacillus polymyxa 0.00 1 1 S 562959 Paenibacillus cellulositrophicus 0.00 6 0 G 329857 Cohnella 0.00 6 6 S 2507935 Cohnella abietis 0.01 12 0 F 186823 Alicyclobacillaceae 0.01 12 1 G 29330 Alicyclobacillus 0.01 11 11 S 2931921 Alicyclobacillus mengziensis 0.00 4 0 O1 539002 Bacillales incertae sedis 0.00 3 0 F 539003 Bacillales Family X. Incertae Sedis 0.00 3 0 G 1609627 Hydrogenibacillus 0.00 3 0 G1 2773237 unclassified Hydrogenibacillus 0.00 3 3 S 2866627 Hydrogenibacillus sp. N12 0.00 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 1 1 G 33986 Exiguobacterium 0.00 3 0 F 539738 Gemellaceae 0.00 3 3 G 1378 Gemella 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 F 186824 Thermoactinomycetaceae 0.00 1 0 G 1677050 Novibacillus 0.00 1 1 S 1471761 Novibacillus thermophilus 0.05 89 0 C 186801 Clostridia 0.04 67 1 O 186802 Eubacteriales 0.01 13 1 F 216572 Oscillospiraceae 0.00 4 0 G 35829 Acetivibrio 0.00 3 3 S 1677857 Acetivibrio saccincola 0.00 1 1 S 1515 Acetivibrio thermocellus 0.00 3 0 G 1263 Ruminococcus 0.00 2 2 S 1161942 Ruminococcus champanellensis 0.00 1 1 S 2564099 Ruminococcus bovis 0.00 3 0 G 2842531 Solibaculum 0.00 3 3 S 2780922 Solibaculum mannosilyticum 0.00 1 0 G 253238 Ethanoligenens 0.00 1 1 S 253239 Ethanoligenens harbinense 0.00 1 0 G 459786 Oscillibacter 0.00 1 1 S 2763056 Oscillibacter hominis 0.01 12 0 F 186807 Peptococcaceae 0.01 12 0 G 2924872 Acididesulfobacillus 0.01 12 12 S 1561005 Acididesulfobacillus acetoxydans 0.01 10 0 F 31979 Clostridiaceae 0.01 10 0 G 1485 Clostridium 0.00 7 7 S 1502 Clostridium perfringens 0.00 1 1 S 36839 Clostridium felsineum 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 2483110 Clostridium sp. JN-1 0.00 1 1 S 1491 Clostridium botulinum 0.00 8 8 F 31984 Heliobacteriaceae 0.00 8 0 F 543349 Symbiobacteriaceae 0.00 8 0 G 1006480 Caldinitratiruptor 0.00 8 8 S 671077 Caldinitratiruptor microaerophilus 0.00 7 0 F 186806 Eubacteriaceae 0.00 7 7 G 33951 Acetobacterium 0.00 6 0 F 2937909 Desulfitobacteriaceae 0.00 6 6 G 56112 Dehalobacter 0.00 1 0 O1 538999 Eubacteriales incertae sedis 0.00 1 1 G 1686313 Fenollaria 0.00 1 0 F 2867375 Desulfallaceae 0.00 1 1 G 2867376 Desulfoscipio 0.01 11 0 O 53433 Halanaerobiales 0.01 11 0 F 53434 Halobacteroidaceae 0.01 11 0 G 42417 Halobacteroides 0.01 11 0 S 42422 Halobacteroides halobius 0.01 11 11 S1 748449 Halobacteroides halobius DSM 5150 0.00 6 1 O 3085636 Lachnospirales 0.00 3 1 F 186803 Lachnospiraceae 0.00 1 0 G 841 Roseburia 0.00 1 1 S 301301 Roseburia hominis 0.00 1 0 G 1506553 Lachnoclostridium 0.00 1 1 S 29347 [Clostridium] scindens 0.00 2 0 F 3018741 Cellulosilyticaceae 0.00 2 2 G 698776 Cellulosilyticum 0.00 2 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 249529 Caldanaerobacter 0.00 1 0 S 911092 Caldanaerobacter subterraneus 0.00 1 0 S1 119072 Caldanaerobacter subterraneus subsp. tengcongensis 0.00 1 1 S2 273068 Caldanaerobacter subterraneus subsp. tengcongensis MB4 0.00 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 1 0 G 252965 Mahella 0.00 1 0 S 252966 Mahella australiensis 0.00 1 1 S1 697281 Mahella australiensis 50-1 BON 0.00 2 0 O 3082720 Peptostreptococcales 0.00 1 1 F 186804 Peptostreptococcaceae 0.00 1 0 F 3030910 Anaerovoracaceae 0.00 1 1 G 86331 Mogibacterium 0.00 1 0 O 3085656 Monoglobales 0.00 1 0 F 3085657 Monoglobaceae 0.00 1 0 G 2039302 Monoglobus 0.00 1 1 S 1981510 Monoglobus pectinilyticus 0.04 68 0 C 909932 Negativicutes 0.04 59 0 O 1843489 Veillonellales 0.04 59 0 F 31977 Veillonellaceae 0.04 59 2 G 29465 Veillonella 0.03 52 52 S 423477 Veillonella rogosae 0.00 5 5 S 29466 Veillonella parvula 0.01 9 0 O 909929 Selenomonadales 0.01 9 0 F 1843491 Selenomonadaceae 0.01 9 9 G 970 Selenomonas 0.01 17 0 C 1737404 Tissierellia 0.01 17 0 O 1737405 Tissierellales 0.01 17 0 F 1570339 Peptoniphilaceae 0.01 10 0 G 165779 Anaerococcus 0.01 10 0 S 33034 Anaerococcus prevotii 0.01 10 10 S1 525919 Anaerococcus prevotii DSM 20548 0.00 5 0 G 150022 Finegoldia 0.00 5 5 S 1260 Finegoldia magna 0.00 1 0 G 543311 Parvimonas 0.00 1 1 S 33033 Parvimonas micra 0.00 1 0 G 1161127 Murdochiella 0.00 1 1 S 1852373 Murdochiella vaginalis 0.00 1 0 C 3086086 Dethiobacteria 0.00 1 0 O 3086087 Dethiobacterales 0.00 1 0 F 3086088 Dethiobacteraceae 0.00 1 0 G 338648 Candidatus Contubernalis 0.00 1 1 S 338645 Candidatus Contubernalis alkalaceticus 2.21 3607 7 P 201174 Actinomycetota 2.18 3558 65 C 1760 Actinomycetes 1.29 2111 13 O 85009 Propionibacteriales 1.28 2090 65 F 31957 Propionibacteriaceae 1.17 1906 35 G 1912216 Cutibacterium 1.15 1870 1864 S 1747 Cutibacterium acnes 0.00 5 5 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 1 1 S1 1122995 Cutibacterium acnes DSM 1897 0.00 1 1 S 2559073 Cutibacterium modestum 0.06 93 48 G 29404 Microlunatus 0.02 29 29 S 546874 Microlunatus sagamiharensis 0.01 14 0 S 29405 Microlunatus phosphovorus 0.01 14 14 S1 1032480 Microlunatus phosphovorus NM-1 0.00 1 1 S 630515 Microlunatus soli 0.00 1 0 G1 2619695 unclassified Microlunatus 0.00 1 1 S 2672569 Microlunatus sp. Gsoil 973 0.01 15 0 G 1912215 Acidipropionibacterium 0.01 15 15 S 1749 Acidipropionibacterium jensenii 0.00 4 0 G 1743 Propionibacterium 0.00 4 4 S 1744 Propionibacterium freudenreichii 0.00 3 1 G 72763 Tessaracoccus 0.00 1 1 S 1285901 Tessaracoccus defluvii 0.00 1 1 S 2161816 Tessaracoccus timonensis 0.00 2 0 G 2801844 Arachnia 0.00 2 2 S 1750 Arachnia propionica 0.00 1 0 G 369926 Brooklawnia 0.00 1 1 S 3041175 Brooklawnia propionicigenes 0.00 1 1 G 1085622 Propioniciclava 0.00 7 0 F 85015 Nocardioidaceae 0.00 4 2 G 1839 Nocardioides 0.00 1 1 S 2575440 Nocardioides jishulii 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 3036374 Nocardioides sp. BP30 0.00 2 0 G 3024237 Solicola 0.00 2 2 S 2908642 Solicola gregarius 0.00 1 0 G 53387 Friedmanniella 0.00 1 1 S 546871 Friedmanniella luteola 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 0 G 182639 Kribbella 0.00 1 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 2975966 Kribbella sp. NBC_00359 0.63 1027 3 O 85007 Mycobacteriales 0.40 649 0 F 1653 Corynebacteriaceae 0.40 649 337 G 1716 Corynebacterium 0.07 110 110 S 38284 Corynebacterium accolens 0.04 62 62 S 187491 Corynebacterium glaucum 0.02 33 33 S 38289 Corynebacterium jeikeium 0.01 13 13 S 161895 Corynebacterium phocae 0.01 13 13 S 1414719 Corynebacterium jeddahense 0.01 10 10 S 1758466 Corynebacterium faecale 0.01 10 0 S 1718 Corynebacterium glutamicum 0.01 10 10 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 8 0 S 575200 Corynebacterium maris 0.00 8 8 S1 1224163 Corynebacterium maris DSM 45190 0.00 6 6 S 679663 Corynebacterium canis 0.00 6 6 S 61592 Corynebacterium durum 0.00 5 0 G1 2624378 unclassified Corynebacterium 0.00 5 5 S 1487956 Corynebacterium sp. ATCC 6931 0.00 5 5 S 35757 Corynebacterium cystitidis 0.00 4 4 S 2080740 Corynebacterium yudongzhengii 0.00 4 4 S 1719 Corynebacterium pseudotuberculosis 0.00 3 3 S 2768834 Corynebacterium zhongnanshanii 0.00 3 0 S 441501 Corynebacterium massiliense 0.00 3 3 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 2 2 S 53374 Corynebacterium coyleae 0.00 2 2 S 1652495 Corynebacterium crudilactis 0.00 2 2 S 43768 Corynebacterium matruchotii 0.00 2 0 S 1230998 Corynebacterium frankenforstense 0.00 2 2 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.00 2 0 S 234828 Corynebacterium caspium 0.00 2 2 S1 1121355 Corynebacterium caspium DSM 44850 0.00 2 2 S 2709394 Corynebacterium lizhenjunii 0.00 1 1 S 1717 Corynebacterium diphtheriae 0.00 1 1 S 43765 Corynebacterium amycolatum 0.00 1 1 S 2709392 Corynebacterium qintianiae 0.00 1 1 S 43769 Corynebacterium propinquum 0.00 1 1 S 65058 Corynebacterium ulcerans 0.20 332 0 F 2805586 Lawsonellaceae 0.20 332 0 G 1847725 Lawsonella 0.20 332 332 S 1528099 Lawsonella clevelandensis 0.01 22 0 F 1762 Mycobacteriaceae 0.01 21 0 G 1763 Mycobacterium 0.01 17 0 G1 77643 Mycobacterium tuberculosis complex 0.01 17 17 S 1773 Mycobacterium tuberculosis 0.00 4 0 G1 2993898 Mycobacterium ulcerans group 0.00 4 4 S 133549 Mycobacterium shottsii 0.00 1 1 G 1866885 Mycolicibacterium 0.01 20 0 F 85025 Nocardiaceae 0.01 18 1 G 1827 Rhodococcus 0.01 17 17 S 37919 Rhodococcus opacus 0.00 2 1 G 1817 Nocardia 0.00 1 1 S 1824 Nocardia asteroides 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 84595 Gordonia polyisoprenivorans 0.18 296 4 O 85006 Micrococcales 0.10 166 0 F 145357 Dermacoccaceae 0.10 166 20 G 57495 Dermacoccus 0.09 146 146 S 1274 Dermacoccus nishinomiyaensis 0.04 71 2 F 1268 Micrococcaceae 0.02 31 31 G 1269 Micrococcus 0.02 28 12 G 32207 Rothia 0.01 9 9 S 2047 Rothia dentocariosa 0.00 3 3 S 43675 Rothia mucilaginosa 0.00 3 3 S 172042 Rothia aeria 0.00 1 1 S 169480 Rothia amarae 0.00 5 0 G 57493 Kocuria 0.00 5 0 G1 2649579 unclassified Kocuria 0.00 5 5 S 2711328 Kocuria sp. TGY1127_2 0.00 3 0 G 1663 Arthrobacter 0.00 3 1 G1 235627 unclassified Arthrobacter 0.00 2 2 S 2991715 Arthrobacter sp. ATA002 0.00 1 0 G 1742993 Pseudarthrobacter 0.00 1 0 G1 2647000 unclassified Pseudarthrobacter 0.00 1 1 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 0 G 1742989 Glutamicibacter 0.00 1 1 S 37929 Glutamicibacter nicotianae 0.03 47 2 F 85023 Microbacteriaceae 0.02 40 0 G 33882 Microbacterium 0.02 40 40 S 3079935 Microbacterium limosum 0.00 1 1 G 33877 Agromyces 0.00 1 1 G 33886 Rathayibacter 0.00 1 0 G 1573 Clavibacter 0.00 1 1 S 31963 Clavibacter nebraskensis 0.00 1 0 G 69578 Cryobacterium 0.00 1 1 S 670052 Cryobacterium arcticum 0.00 1 0 G 76634 Mycetocola 0.00 1 1 S 2079792 Mycetocola zhujimingii 0.00 6 0 F 2805591 Tropherymataceae 0.00 6 0 G 2038 Tropheryma 0.00 6 6 S 2039 Tropheryma whipplei 0.00 1 0 F 2805590 Ornithinimicrobiaceae 0.00 1 0 G 265976 Serinicoccus 0.00 1 1 S 1078471 Serinicoccus profundi 0.00 1 1 F 85019 Brevibacteriaceae 0.01 18 0 O 2037 Actinomycetales 0.01 18 5 F 2049 Actinomycetaceae 0.01 12 12 G 2529408 Schaalia 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 595468 Gleimia hominis 0.01 16 0 O 85011 Kitasatosporales 0.01 16 0 F 2062 Streptomycetaceae 0.01 16 1 G 1883 Streptomyces 0.01 10 1 G1 2593676 unclassified Streptomyces 0.00 2 2 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 2903649 Streptomyces sp. NBC_00435 0.00 1 1 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 2903645 Streptomyces sp. NBC_00310 0.00 1 1 S 3075198 Streptomyces sp. ITFR-16 0.00 1 1 S 2975733 Streptomyces sp. NBC_00385 0.00 2 2 S 35621 Streptomyces mobaraensis 0.00 1 0 G1 629295 Streptomyces griseus group 0.00 1 0 G2 1482561 Streptomyces anulatus subgroup 0.00 1 1 S 1892 Streptomyces anulatus 0.00 1 1 S 40318 Streptomyces nodosus 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.01 12 0 O 85012 Streptosporangiales 0.01 11 8 F 2012 Thermomonosporaceae 0.00 3 0 G 2019 Thermomonospora 0.00 2 2 S 1411117 Thermomonospora amylolytica 0.00 1 0 S 2020 Thermomonospora curvata 0.00 1 1 S1 471852 Thermomonospora curvata DSM 43183 0.00 1 0 F 83676 Nocardiopsaceae 0.00 1 0 G 2913367 Spiractinospora 0.00 1 1 S 2820884 Spiractinospora alimapuensis 0.00 6 0 O 85004 Bifidobacteriales 0.00 6 0 F 31953 Bifidobacteriaceae 0.00 6 0 G 1678 Bifidobacterium 0.00 5 0 S 216816 Bifidobacterium longum 0.00 4 4 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 1 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 0 S 28025 Bifidobacterium animalis 0.00 1 0 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 1 1 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 3 0 O 85008 Micromonosporales 0.00 3 3 F 28056 Micromonosporaceae 0.00 2 0 O 1643682 Geodermatophilales 0.00 2 0 F 85030 Geodermatophilaceae 0.00 2 0 G 1860 Geodermatophilus 0.00 1 0 S 1861 Geodermatophilus obscurus 0.00 1 1 S1 526225 Geodermatophilus obscurus DSM 43160 0.00 1 0 G1 2637632 unclassified Geodermatophilus 0.00 1 1 S 1528104 Geodermatophilus sp. DSM 44513 0.00 1 0 O 85010 Pseudonocardiales 0.00 1 0 F 2070 Pseudonocardiaceae 0.00 1 0 G 1847 Pseudonocardia 0.00 1 1 G1 2619320 unclassified Pseudonocardia 0.00 1 0 O 1217098 Jiangellales 0.00 1 0 F 1217100 Jiangellaceae 0.00 1 1 G 281472 Jiangella 0.02 33 0 C 84992 Acidimicrobiia 0.02 33 0 O 84993 Acidimicrobiales 0.02 33 0 F 633392 Iamiaceae 0.02 32 0 G 2789775 Actinomarinicola 0.02 32 32 S 2789776 Actinomarinicola tropica 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.00 3 0 C 84998 Coriobacteriia 0.00 3 0 O 1643822 Eggerthellales 0.00 3 0 F 1643826 Eggerthellaceae 0.00 2 2 G 447020 Adlercreutzia 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.00 3 0 C 1497346 Thermoleophilia 0.00 2 0 O 588674 Thermoleophilales 0.00 2 0 F 320796 Thermoleophilaceae 0.00 2 0 G 192992 Thermoleophilum 0.00 2 2 S 29539 Thermoleophilum album 0.00 1 0 O 588673 Solirubrobacterales 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 0 G 3231543 Svornostia 0.00 1 1 S 2898438 Svornostia abyssi 0.00 2 0 C 84995 Rubrobacteria 0.00 2 0 O 84996 Rubrobacterales 0.00 2 0 F 84997 Rubrobacteraceae 0.00 2 2 G 42255 Rubrobacter 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1755823 Egicoccales 0.00 1 0 F 1755824 Egicoccaceae 0.00 1 0 G 1755825 Egicoccus 0.00 1 1 S 1670830 Egicoccus halophilus 0.05 79 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.05 79 0 P 1117 Cyanobacteriota 0.05 79 7 C 3028117 Cyanophyceae 0.03 43 0 C1 1301283 Oscillatoriophycideae 0.02 37 0 O 1150 Oscillatoriales 0.02 32 0 F 2934961 Sirenicapillariaceae 0.02 32 0 G 2596745 Limnospira 0.02 32 0 S 147322 Limnospira indica 0.02 31 31 S1 2760438 Limnospira indica BM01 0.00 1 1 S1 376219 Limnospira indica PCC 8005 0.00 3 0 F 1892254 Oscillatoriaceae 0.00 3 0 G 1198 Phormidium 0.00 3 0 S 2974039 Phormidium yuhuli 0.00 3 3 S1 2940671 Phormidium yuhuli AB48 0.00 2 0 F 1892252 Microcoleaceae 0.00 2 1 G 54304 Planktothrix 0.00 1 0 S 1160 Planktothrix agardhii 0.00 1 1 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.00 6 0 O 1118 Chroococcales 0.00 6 0 F 1890449 Microcystaceae 0.00 6 0 G 1125 Microcystis 0.00 6 0 G1 2643300 unclassified Microcystis 0.00 6 6 S 1967666 Microcystis sp. MC19 0.01 13 0 O 1955042 Gloeomargaritales 0.01 13 0 F 1955043 Gloeomargaritaceae 0.01 13 0 G 1188227 Gloeomargarita 0.01 13 0 S 1188228 Gloeomargarita lithophora 0.01 13 13 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.00 5 3 O 1161 Nostocales 0.00 1 0 F 1185 Rivulariaceae 0.00 1 0 G 373984 Rivularia 0.00 1 0 G1 2676603 unclassified Rivularia (in: cyanobacteria) 0.00 1 1 S 373994 Rivularia sp. PCC 7116 0.00 1 0 F 1892259 Aphanizomenonaceae 0.00 1 0 G 752201 Sphaerospermopsis 0.00 1 0 S 984207 Sphaerospermopsis torques-reginae 0.00 1 1 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.00 3 0 O 1890424 Synechococcales 0.00 2 0 F 2881426 Prochlorococcaceae 0.00 2 2 G 1218 Prochlorococcus 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 0 G1 2626047 unclassified Synechococcus 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 3 0 O 3039985 Nodosilineales 0.00 3 0 F 3039986 Nodosilineaceae 0.00 2 0 G 1120752 Nodosilinea 0.00 2 0 G1 2628167 unclassified Nodosilinea 0.00 2 2 S 3037479 Nodosilinea sp. E11 0.00 1 0 G 170610 Halomicronema 0.00 1 0 S 1209493 Halomicronema hongdechloris 0.00 1 1 S1 1641165 Halomicronema hongdechloris C2206 0.00 2 1 O 307595 Gloeobacterales 0.00 1 0 F 1890422 Gloeobacteraceae 0.00 1 1 G 33071 Gloeobacter 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 O 3079757 Gomontiellales 0.00 1 0 F 1890431 Chamaesiphonaceae 0.00 1 0 G 217161 Chamaesiphon 0.00 1 0 S 1173032 Chamaesiphon minutus 0.00 1 1 S1 1173020 Chamaesiphon minutus PCC 6605 0.04 58 0 P 200795 Chloroflexota 0.02 39 0 C 32061 Chloroflexia 0.02 39 0 O 32064 Chloroflexales 0.02 35 0 O1 1508594 Chloroflexineae 0.02 35 0 F 1106 Chloroflexaceae 0.02 35 0 G 1107 Chloroflexus 0.02 35 0 S 152260 Chloroflexus aggregans 0.02 35 35 S1 326427 Chloroflexus aggregans DSM 9485 0.00 4 0 O1 1508595 Roseiflexineae 0.00 4 0 F 1508635 Roseiflexaceae 0.00 4 0 G 120961 Roseiflexus 0.00 4 0 S 120962 Roseiflexus castenholzii 0.00 4 4 S1 383372 Roseiflexus castenholzii DSM 13941 0.01 11 0 C 292625 Anaerolineae 0.01 11 0 O 292629 Anaerolineales 0.01 11 0 F 292628 Anaerolineaceae 0.01 10 0 G 1649478 Pelolinea 0.01 10 10 S 913107 Pelolinea submarina 0.00 1 0 G 233189 Anaerolinea 0.00 1 0 S 167964 Anaerolinea thermophila 0.00 1 1 S1 926569 Anaerolinea thermophila UNI-1 0.00 4 0 C 301297 Dehalococcoidia 0.00 4 0 C1 648176 SAR202 cluster 0.00 4 0 O 3143247 Candidatus Lucifugimonadales 0.00 4 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 4 0 G 3143249 Candidatus Lucifugimonas 0.00 4 4 S 3038979 Candidatus Lucifugimonas marina 0.00 2 0 C 388447 Ktedonobacteria 0.00 2 0 O 388448 Ktedonobacterales 0.00 2 0 F 2692416 Ktedonosporobacteraceae 0.00 2 0 G 2692417 Ktedonosporobacter 0.00 2 2 S 2509675 Ktedonosporobacter rubrisoli 0.00 2 0 C 475962 Caldilineae 0.00 2 0 O 475963 Caldilineales 0.00 2 0 F 475964 Caldilineaceae 0.00 2 0 G 233191 Caldilinea 0.00 2 0 S 133453 Caldilinea aerophila 0.00 2 2 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.01 21 5 P 544448 Mycoplasmatota 0.00 6 0 C 31969 Mollicutes 0.00 6 0 O 2085 Mycoplasmatales 0.00 6 0 F 2092 Mycoplasmataceae 0.00 6 3 G 2093 Mycoplasma 0.00 2 0 G1 656088 Mycoplasma mycoides group 0.00 1 0 S 2095 Mycoplasma capricolum 0.00 1 1 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 1 S 1179777 Mycoplasma feriruminatoris 0.00 1 0 G1 2683645 unclassified Mycoplasma 0.00 1 1 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.00 6 0 O 2790996 Mycoplasmoidales 0.00 5 0 F 2790998 Mycoplasmoidaceae 0.00 3 0 G 2791001 Malacoplasma 0.00 2 0 S 28227 Malacoplasma penetrans 0.00 2 2 S1 272633 Malacoplasma penetrans HF-2 0.00 1 1 S 2116 Malacoplasma iowae 0.00 2 2 G 2129 Ureaplasma 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2767358 Mycoplasmopsis 0.00 1 1 S 28903 Mycoplasmopsis bovis 0.00 4 0 C 1912503 Candidatus Izimaplasma 0.00 4 0 O 2975519 Candidatus Izemoplasmatales 0.00 3 0 F 3078170 Hujiaoplasmataceae 0.00 3 0 G 3078171 Hujiaoplasma 0.00 3 3 S 2725268 Hujiaoplasma nucleasis 0.00 1 0 F 2975520 Candidatus Izemoplasmataceae 0.00 1 0 G 2975521 Candidatus Xianfuyuplasma 0.00 1 1 S 2782163 Candidatus Xianfuyuplasma coldseepsis 0.01 11 0 P 67819 Armatimonadota 0.00 8 0 C 1663419 Fimbriimonadia 0.00 8 0 O 1663425 Fimbriimonadales 0.00 8 0 F 1663426 Fimbriimonadaceae 0.00 8 0 G 1005038 Fimbriimonas 0.00 8 0 S 1005039 Fimbriimonas ginsengisoli 0.00 8 8 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.00 3 0 C 1077257 Chthonomonadia 0.00 3 0 O 1077263 Chthonomonadales 0.00 3 0 F 1077264 Chthonomonadaceae 0.00 3 0 G 1077265 Chthonomonas 0.00 3 0 S 454171 Chthonomonas calidirosea 0.00 3 3 S1 1303518 Chthonomonas calidirosea T49 3.53 5757 0 D1 1783270 FCB group 3.52 5747 0 D2 68336 Bacteroidota/Chlorobiota group 3.52 5740 3 P 976 Bacteroidota 3.27 5342 0 C 768503 Cytophagia 3.27 5342 1 O 768507 Cytophagales 3.26 5324 0 F 89373 Cytophagaceae 3.26 5323 0 G 107 Spirosoma 3.26 5320 5320 S 2666025 Spirosoma endbachense 0.00 3 3 S 2735870 Spirosoma taeanense 0.00 1 0 G 978 Cytophaga 0.00 1 0 S 985 Cytophaga hutchinsonii 0.00 1 1 S1 269798 Cytophaga hutchinsonii ATCC 33406 0.01 16 16 F 1522127 Catalimonadaceae 0.00 1 0 F 3141702 Leadbetterellaceae 0.00 1 0 G 312278 Emticicia 0.00 1 0 G1 2627301 unclassified Emticicia 0.00 1 1 S 2916755 Emticicia sp. 21SJ11W-3 0.14 226 0 C 117743 Flavobacteriia 0.14 226 0 O 200644 Flavobacteriales 0.09 152 6 F 49546 Flavobacteriaceae 0.06 98 0 G 762641 Muriicola 0.06 98 98 S 2507538 Muriicola soli 0.01 20 16 G 237 Flavobacterium 0.00 2 2 S 2897181 Flavobacterium channae 0.00 2 0 G1 196869 unclassified Flavobacterium 0.00 2 2 S 2732161 Flavobacterium sp. IMCC34852 0.01 18 0 G 286104 Winogradskyella 0.01 17 17 S 2686077 Winogradskyella forsetii 0.00 1 1 S 2697010 Winogradskyella helgolandensis 0.00 6 0 G 326319 Dokdonia 0.00 6 0 G1 2615033 unclassified Dokdonia 0.00 6 6 S 983548 Dokdonia sp. 4H-3-7-5 0.00 3 0 G 2058174 Antarcticibacterium 0.00 3 3 S 2585771 Antarcticibacterium arcticum 0.00 1 0 G 2831916 Pukyongia 0.00 1 1 S 2094025 Pukyongia salina 0.04 73 2 F 2762318 Weeksellaceae 0.04 71 69 G 2766734 Faecalibacter 0.00 2 0 G1 2766735 unclassified Faecalibacter 0.00 2 2 S 3103144 Faecalibacter sp. LW9 0.00 1 0 F 39782 Blattabacteriaceae 0.00 1 0 G 34098 Blattabacterium 0.00 1 1 S 1653831 Blattabacterium cuenoti 0.09 140 0 C 200643 Bacteroidia 0.05 81 0 O 1970189 Marinilabiliales 0.05 81 0 F 558415 Marinilabiliaceae 0.05 81 0 G 3129724 Xiashengella 0.05 81 81 S 2949635 Xiashengella succiniciproducens 0.04 59 0 O 171549 Bacteroidales 0.03 56 0 F 171552 Prevotellaceae 0.03 56 0 G 2974251 Segatella 0.03 56 55 S 165179 Segatella copri 0.00 1 1 S1 537011 Segatella copri DSM 18205 0.00 3 0 F 815 Bacteroidaceae 0.00 3 0 G 816 Bacteroides 0.00 3 3 S 818 Bacteroides thetaiotaomicron 0.01 15 0 C 117747 Sphingobacteriia 0.01 15 0 O 200666 Sphingobacteriales 0.01 15 0 F 84566 Sphingobacteriaceae 0.01 15 0 G 423349 Mucilaginibacter 0.01 15 15 S 1173583 Mucilaginibacter sabulilitoris 0.01 14 0 C 1853228 Chitinophagia 0.01 14 0 O 1853229 Chitinophagales 0.01 14 0 F 563835 Chitinophagaceae 0.01 14 0 G 1649506 Thermoflavifilum 0.01 14 0 G1 3099314 unclassified Thermoflavifilum 0.01 14 14 S 1968839 Thermoflavifilum sp. 0.00 7 0 P 1853220 Rhodothermota 0.00 7 0 C 1853222 Rhodothermia 0.00 7 7 O 1853224 Rhodothermales 0.01 10 0 P 456828 Candidatus Cloacimonadota 0.01 10 0 C 3039863 Candidatus Cloacimonadia 0.01 10 0 O 3039864 Candidatus Cloacimonadales 0.01 10 0 F 3039865 Candidatus Cloacimonadaceae 0.01 10 0 G 456826 Candidatus Cloacimonas 0.01 10 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.01 10 10 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.22 361 0 P 508458 Synergistota 0.22 361 0 C 649775 Synergistia 0.22 361 0 O 649776 Synergistales 0.22 361 0 F 649777 Synergistaceae 0.22 359 0 G 81411 Aminomonas 0.22 359 0 S 81412 Aminomonas paucivorans 0.22 359 359 S1 584708 Aminomonas paucivorans DSM 12260 0.00 2 0 G 508459 Cloacibacillus 0.00 2 2 S 1197717 Cloacibacillus porcorum 0.12 193 0 D1 2323 Bacteria incertae sedis 0.12 193 0 D2 1783234 Bacteria candidate phyla 0.12 193 61 P 95818 Candidatus Saccharibacteria 0.08 132 0 C 2093818 Candidatus Saccharimonadia 0.04 72 0 O 2093825 Candidatus Saccharimonadales 0.04 72 0 F 2171986 Candidatus Saccharimonadaceae 0.04 72 0 G 1331051 Candidatus Saccharimonas 0.04 72 72 S 1332188 Candidatus Saccharimonas aalborgensis 0.04 60 0 O 2093819 Candidatus Nanosynbacterales 0.04 60 0 F 2093822 Candidatus Nanosynbacteraceae 0.04 60 60 G 2093823 Candidatus Nanosynbacter 0.07 111 0 P 57723 Acidobacteriota 0.06 101 0 C 1813735 Vicinamibacteria 0.06 101 0 O 2910145 Vicinamibacterales 0.06 101 0 F 2211325 Vicinamibacteraceae 0.06 101 97 G 2004797 Luteitalea 0.00 2 2 S 1855912 Luteitalea pratensis 0.00 2 0 G1 2626009 unclassified Luteitalea 0.00 2 2 S 2802971 Luteitalea sp. TBR-22 0.01 10 0 C 533205 Holophagae 0.01 10 0 O 574975 Holophagales 0.01 10 0 F 574976 Holophagaceae 0.00 7 7 G 44675 Geothrix 0.00 2 0 G 35838 Holophaga 0.00 2 0 G1 89282 environmental samples 0.00 2 2 S 188475 uncultured Holophaga sp. 0.00 1 0 G 3074468 Mesoterricola 0.00 1 1 S 2927980 Mesoterricola sediminis 0.05 88 17 P 200940 Thermodesulfobacteriota 0.02 34 0 C 3031449 Desulfovibrionia 0.02 34 0 O 213115 Desulfovibrionales 0.02 34 0 F 194924 Desulfovibrionaceae 0.02 29 29 G 2035811 Pseudodesulfovibrio 0.00 4 0 G 3126915 Taurinivorans 0.00 4 4 S 2787751 Taurinivorans muris 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.01 23 2 C 3031651 Desulfuromonadia 0.01 21 2 O 69541 Desulfuromonadales 0.01 18 0 F 213421 Desulfuromonadaceae 0.01 18 18 G 890 Desulfuromonas 0.00 1 0 F 2812024 Syntrophotaleaceae 0.00 1 0 G 2812025 Syntrophotalea 0.00 1 0 S 19 Syntrophotalea carbinolica 0.00 1 1 S1 338963 Syntrophotalea carbinolica DSM 2380 0.01 13 0 C 3031451 Desulfobulbia 0.01 13 0 O 3024411 Desulfobulbales 0.01 12 0 F 213121 Desulfobulbaceae 0.01 12 0 G 893 Desulfobulbus 0.01 12 12 S 1986146 Desulfobulbus oralis 0.00 1 0 F 2886822 Desulfocapsaceae 0.00 1 0 G 51194 Desulfofustis 0.00 1 1 S 2740163 Desulfofustis limnaeus 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 0 O 188710 Thermodesulfobacteriales 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 0 G 2033601 Thermosulfuriphilus 0.00 1 1 S 1936021 Thermosulfuriphilus ammonigenes 0.04 66 0 P 29547 Campylobacterota 0.04 66 0 C 3031852 Epsilonproteobacteria 0.04 65 0 O 213849 Campylobacterales 0.04 59 5 F 72293 Helicobacteraceae 0.03 54 3 G 209 Helicobacter 0.02 34 34 S 213 Helicobacter cinaedi 0.01 17 17 S 210 Helicobacter pylori 0.00 4 0 F 72294 Campylobacteraceae 0.00 4 0 G 194 Campylobacter 0.00 2 2 S 449520 Campylobacter canadensis 0.00 2 0 S 522485 Campylobacter avium 0.00 2 2 S1 522484 Campylobacter avium LMG 24591 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 202746 Sulfurimonas 0.00 2 1 G1 2623549 unclassified Sulfurimonas 0.00 1 1 S 3131936 Sulfurimonas sp. HSL3-2 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 224467 Nautiliaceae 0.00 1 0 G 191301 Caminibacter 0.00 1 1 S 1424653 Caminibacter pacificus 0.04 60 0 D1 1783257 PVC group 0.03 44 0 P 74201 Verrucomicrobiota 0.03 43 0 C 414999 Opitutia 0.02 38 0 O 415001 Puniceicoccales 0.02 38 0 F 3056371 Coraliomargaritaceae 0.02 38 6 G 442430 Coraliomargarita 0.02 32 0 S 395922 Coraliomargarita akajimensis 0.02 32 32 S1 583355 Coraliomargarita akajimensis DSM 45221 0.00 5 0 O 415000 Opitutales 0.00 5 3 F 134623 Opitutaceae 0.00 2 0 G 2576890 Nibricoccus 0.00 2 2 S 2576891 Nibricoccus aquaticus 0.00 1 0 P1 326457 Verrucomicrobiota incertae sedis 0.00 1 0 G 1541670 Methylacidimicrobium 0.00 1 1 G1 2730358 unclassified Methylacidimicrobium 0.01 10 0 P 203682 Planctomycetota 0.01 9 2 C 203683 Planctomycetia 0.00 3 0 O 2691354 Pirellulales 0.00 3 0 F 2691357 Pirellulaceae 0.00 3 0 G 2005380 Mariniblastus 0.00 3 3 S 980251 Mariniblastus fucicola 0.00 2 0 O 112 Planctomycetales 0.00 2 0 F 126 Planctomycetaceae 0.00 2 2 G 1649453 Gimesia 0.00 2 0 O 2691355 Gemmatales 0.00 2 0 F 1914233 Gemmataceae 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.00 1 0 G 2731450 Limnoglobus 0.00 1 1 S 2598579 Limnoglobus roseus 0.00 1 0 C 2897345 Candidatus Uabimicrobiia 0.00 1 0 O 2897347 Candidatus Uabimicrobiales 0.00 1 0 F 2897348 Candidatus Uabimicrobiaceae 0.00 1 0 G 2897349 Candidatus Uabimicrobium 0.00 1 1 S 2596890 Candidatus Uabimicrobium amorphum 0.00 4 0 P 134625 Kiritimatiellota 0.00 4 0 C 2907184 Tichowtungiia 0.00 4 0 O 2907185 Tichowtungiales 0.00 4 0 F 2907186 Tichowtungiaceae 0.00 4 0 G 2907187 Tichowtungia 0.00 4 4 S 2697043 Tichowtungia aerotolerans 0.00 2 0 P 204428 Chlamydiota 0.00 2 0 C 204429 Chlamydiia 0.00 2 0 O 51291 Chlamydiales 0.00 2 2 F 809 Chlamydiaceae 0.01 23 0 P 2818505 Myxococcota 0.01 22 0 P1 3031711 Polyangia 0.01 21 0 O 3031712 Polyangiales 0.01 17 2 F 49 Polyangiaceae 0.01 15 0 G 50 Chondromyces 0.01 15 15 S 52 Chondromyces crocatus 0.00 4 0 F 1055686 Sandaracinaceae 0.00 4 0 G 1055688 Sandaracinus 0.00 4 4 S 927083 Sandaracinus amylolyticus 0.00 1 0 O 3031714 Haliangiales 0.00 1 0 F 224464 Kofleriaceae 0.00 1 0 G 162027 Haliangium 0.00 1 0 S 80816 Haliangium ochraceum 0.00 1 1 S1 502025 Haliangium ochraceum DSM 14365 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 0 G 161492 Anaeromyxobacter 0.00 1 1 S 2918171 Anaeromyxobacter paludicola 0.01 20 0 P 203691 Spirochaetota 0.01 20 0 C 203692 Spirochaetia 0.01 20 0 O 136 Spirochaetales 0.01 15 0 F 2845253 Treponemataceae 0.01 15 0 G 157 Treponema 0.01 11 11 S 162 Treponema phagedenis 0.00 4 4 S 165 Treponema saccharophilum 0.00 5 0 F 1643685 Borreliaceae 0.00 4 0 G 64895 Borreliella 0.00 2 2 S 29519 Borreliella garinii 0.00 2 2 S 100177 Borreliella lusitaniae 0.00 1 0 G 138 Borrelia 0.00 1 0 G1 2649934 unclassified Borrelia 0.00 1 1 S 2608247 Borrelia sp. A-FGy1 0.01 9 0 P 2138240 Coprothermobacterota 0.01 9 0 C 2138243 Coprothermobacteria 0.01 9 0 O 2138246 Coprothermobacterales 0.01 9 0 F 2138247 Coprothermobacteraceae 0.01 9 0 G 68335 Coprothermobacter 0.01 9 0 S 35786 Coprothermobacter proteolyticus 0.01 9 9 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 5 0 P 32066 Fusobacteriota 0.00 5 0 C 203490 Fusobacteriia 0.00 5 0 O 203491 Fusobacteriales 0.00 5 0 F 1129771 Leptotrichiaceae 0.00 5 1 G 32067 Leptotrichia 0.00 2 2 S 554406 Leptotrichia hongkongensis 0.00 1 1 S 157691 Leptotrichia shahii 0.00 1 0 G1 2633022 unclassified Leptotrichia 0.00 1 1 S 712362 Leptotrichia sp. oral taxon 221 0.00 2 0 P 200918 Thermotogota 0.00 2 0 C 188708 Thermotogae 0.00 1 0 O 2419 Thermotogales 0.00 1 0 F 1643950 Fervidobacteriaceae 0.00 1 0 G 2422 Fervidobacterium 0.00 1 0 S 93466 Fervidobacterium pennivorans 0.00 1 1 S1 771875 Fervidobacterium pennivorans DSM 9078 0.00 1 0 O 1643946 Kosmotogales 0.00 1 0 F 1643948 Kosmotogaceae 0.00 1 0 G 651456 Kosmotoga 0.00 1 0 S 651457 Kosmotoga olearia 0.00 1 1 S1 521045 Kosmotoga olearia TBF 19.5.1 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 0 O 191393 Deferribacterales 0.00 2 0 F 2945021 Calditerrivibrionaceae 0.00 2 0 G 545865 Calditerrivibrio 0.00 2 0 S 477976 Calditerrivibrio nitroreducens 0.00 2 2 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 2 0 D1 68525 delta/epsilon subdivisions 0.00 2 0 C 28221 Deltaproteobacteria 0.00 2 0 O 1779134 Bradymonadales 0.00 2 0 F 2946505 Microvenatoraceae 0.00 2 0 G 2946507 Microvenator 0.00 2 2 S 2600177 Microvenator marinus 0.00 2 0 P 3018035 Bdellovibrionota 0.00 1 0 C 1553900 Oligoflexia 0.00 1 0 O 2024973 Silvanigrellales 0.00 1 0 F 2024974 Silvanigrellaceae 0.00 1 0 G 2698753 Fluviispira 0.00 1 1 S 2493639 Fluviispira sanaruensis 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 1 G 958 Bdellovibrio 0.00 1 0 P 200783 Aquificota 0.00 1 0 C 187857 Aquificia 0.00 1 0 O 32069 Aquificales 0.00 1 0 F 224027 Hydrogenothermaceae 0.00 1 1 G 212790 Sulfurihydrogenibium 0.00 1 0 P 40117 Nitrospirota 0.00 1 0 C 203693 Nitrospiria 0.00 1 0 O 189778 Nitrospirales 0.00 1 0 F 189779 Nitrospiraceae 0.00 1 1 G 1234 Nitrospira 0.00 1 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.00 1 0 P 1293497 Nitrospinota 0.00 1 0 C 1293498 Nitrospinia 0.00 1 0 O 1293499 Nitrospinales 0.00 1 0 F 407032 Nitrospinaceae 0.00 1 0 G 35800 Nitrospina 0.00 1 1 S 1323948 Nitrospina watsonii