6.98 101 101 U 0 unclassified 93.02 1347 0 R 1 root 93.02 1347 1 R1 131567 cellular organisms 92.96 1346 90 D 2 Bacteria 55.73 807 10 P 1224 Pseudomonadota 47.93 694 33 C 1236 Gammaproteobacteria 33.70 488 24 O 91347 Enterobacterales 30.04 435 43 F 543 Enterobacteriaceae 13.47 195 2 G 561 Escherichia 12.98 188 169 S 562 Escherichia coli 0.48 7 7 S1 2079157 Escherichia coli O2:H1 0.35 5 5 S1 2874053 Escherichia coli O25:H1 0.28 4 4 S1 1446600 Escherichia coli O15:H18 0.07 1 1 S1 655817 Escherichia coli ABU 83972 0.07 1 1 S1 331112 Escherichia coli HS 0.07 1 1 S1 362663 Escherichia coli 536 0.28 4 4 S 1499973 Escherichia marmotae 0.07 1 1 S 208962 Escherichia albertii 4.90 71 0 F1 2890311 Klebsiella/Raoultella group 4.90 71 4 G 570 Klebsiella 3.94 57 46 S 573 Klebsiella pneumoniae 0.69 10 10 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.07 1 1 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.48 7 2 S 1463165 Klebsiella quasipneumoniae 0.35 5 5 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.14 2 0 S 244366 Klebsiella variicola 0.14 2 2 S1 640131 Klebsiella variicola At-22 0.07 1 1 S 1134687 Klebsiella michiganensis 3.18 46 1 G 590 Salmonella 3.11 45 4 S 28901 Salmonella enterica 2.83 41 2 S1 59201 Salmonella enterica subsp. enterica 0.62 9 9 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.62 9 9 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.55 8 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.35 5 5 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.14 2 2 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.07 1 1 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.48 7 0 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.48 7 7 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.21 3 3 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.07 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.07 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.07 1 1 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.07 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.07 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 2.97 43 0 G 547 Enterobacter 2.69 39 0 G1 354276 Enterobacter cloacae complex 1.52 22 22 S 299767 Enterobacter ludwigii 0.97 14 14 S 158836 Enterobacter hormaechei 0.14 2 2 S 208224 Enterobacter kobei 0.07 1 1 S 61645 Enterobacter asburiae 0.28 4 4 S 881260 Enterobacter bugandensis 0.83 12 1 F1 36866 unclassified Enterobacteriaceae 0.41 6 6 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.28 4 4 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.07 1 1 S 2675782 Enterobacteriaceae endosymbiont of Donacia proxima 0.62 9 0 F1 191675 Enterobacteriaceae incertae sedis 0.62 9 2 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.41 6 1 F3 84564 ant endosymbionts 0.35 5 0 G 203804 Candidatus Blochmanniella 0.28 4 3 G1 711328 unclassified Candidatus Blochmanniella 0.07 1 1 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.07 1 1 S 251540 Candidatus Blochmannia vicinus 0.07 1 0 F3 146507 aphid secondary symbionts 0.07 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.35 5 0 G 620 Shigella 0.35 5 5 S 623 Shigella flexneri 0.14 2 0 G 544 Citrobacter 0.14 2 0 G1 1344959 Citrobacter freundii complex 0.07 1 1 S 546 Citrobacter freundii 0.07 1 1 S 67827 Citrobacter werkmanii 0.14 2 0 G 2815296 Jejubacter 0.14 2 2 S 2579935 Jejubacter calystegiae 0.14 2 0 G 1330547 Kosakonia 0.07 1 1 S 208223 Kosakonia cowanii 0.07 1 1 S 283686 Kosakonia radicincitans 0.14 2 0 G 1177214 Candidatus Profftia 0.14 2 0 G1 2735709 unclassified Candidatus Profftia 0.14 2 2 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.07 1 1 G 158483 Cedecea 0.07 1 0 G 409304 Candidatus Ishikawella 0.07 1 0 S 168169 Candidatus Ishikawella capsulata 0.07 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.07 1 0 G 2303321 Superficieibacter 0.07 1 0 G1 2645744 unclassified Superficieibacter 0.07 1 1 S 3031919 Superficieibacter sp. HKU1 0.76 11 0 F 2812006 Bruguierivoracaceae 0.76 11 0 G 84565 Sodalis 0.55 8 8 S 2697027 Sodalis ligni 0.21 3 0 S 1486991 Candidatus Sodalis pierantonius 0.21 3 3 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.62 9 0 F 1903411 Yersiniaceae 0.28 4 0 G 613 Serratia 0.14 2 2 S 138074 Serratia symbiotica 0.07 1 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.07 1 1 S 2785630 Serratia sp. CMO1 0.07 1 1 S 61652 Serratia rubidaea 0.28 4 0 G 629 Yersinia 0.28 4 0 G1 1649845 Yersinia pseudotuberculosis complex 0.28 4 0 S 632 Yersinia pestis 0.21 3 3 S1 649716 Yersinia pestis Pestoides G 0.07 1 1 S1 748678 Yersinia pestis str. Pestoides B 0.07 1 1 G 1927833 Candidatus Fukatsuia 0.28 4 0 F 1903409 Erwiniaceae 0.21 3 0 G 551 Erwinia 0.14 2 0 G1 2622719 unclassified Erwinia 0.14 2 2 S 215689 Erwinia sp. Ejp617 0.07 1 1 S 65700 Erwinia tracheiphila 0.07 1 0 G 32199 Buchnera 0.07 1 0 S 9 Buchnera aphidicola 0.07 1 1 S1 2027478 Buchnera aphidicola (Periphyllus acericola) 0.21 3 0 F 1903414 Morganellaceae 0.07 1 0 G 583 Proteus 0.07 1 0 S 1574161 Proteus terrae 0.07 1 1 S1 626774 Proteus terrae subsp. cibarius 0.07 1 0 G 586 Providencia 0.07 1 1 S 1715285 Candidatus Providencia siddallii 0.07 1 0 G 637 Arsenophonus 0.07 1 1 S 638 Arsenophonus nasoniae 0.14 2 0 F 1903410 Pectobacteriaceae 0.14 2 0 G 122277 Pectobacterium 0.07 1 1 S 180957 Pectobacterium brasiliense 0.07 1 1 S 1905730 Pectobacterium parmentieri 2.97 43 0 O 135625 Pasteurellales 2.97 43 1 F 712 Pasteurellaceae 1.59 23 1 G 724 Haemophilus 1.45 21 21 S 729 Haemophilus parainfluenzae 0.07 1 1 S 726 Haemophilus haemolyticus 0.90 13 1 G 713 Actinobacillus 0.83 12 0 S 718 Actinobacillus equuli 0.83 12 12 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.14 2 0 G 745 Pasteurella 0.14 2 1 S 747 Pasteurella multocida 0.07 1 1 S1 115545 Pasteurella multocida subsp. septica 0.14 2 0 G 292486 Avibacterium 0.14 2 2 S 762 Avibacterium volantium 0.07 1 0 G 2899790 Mergibacter 0.07 1 1 S 221402 Mergibacter septicus 0.07 1 0 G 75984 Mannheimia 0.07 1 1 S 85404 Mannheimia varigena 2.42 35 0 O 135614 Lysobacterales 2.42 35 0 F 32033 Lysobacteraceae 2.21 32 0 G 338 Xanthomonas 2.21 32 32 S 29447 Xanthomonas albilineans 0.14 2 1 G 68 Lysobacter 0.07 1 1 S 2698682 Lysobacter oculi 0.07 1 0 G 490567 Arenimonas 0.07 1 1 S 370777 Arenimonas daejeonensis 1.24 18 0 O 2887326 Moraxellales 1.24 18 0 F 468 Moraxellaceae 0.97 14 7 G 469 Acinetobacter 0.35 5 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.28 4 4 S 470 Acinetobacter baumannii 0.07 1 1 S 48296 Acinetobacter pittii 0.07 1 1 S 40214 Acinetobacter johnsonii 0.07 1 1 G1 196816 unclassified Acinetobacter 0.28 4 2 G 475 Moraxella 0.07 1 1 S 90241 Moraxella lincolnii 0.07 1 1 S 2904120 Moraxella nasibovis 1.17 17 0 O 135623 Vibrionales 1.17 17 1 F 641 Vibrionaceae 0.62 9 0 G 662 Vibrio 0.21 3 0 S 52443 Vibrio tapetis 0.21 3 3 S1 1671868 Vibrio tapetis subsp. tapetis 0.14 2 2 S 666 Vibrio cholerae 0.14 2 2 S 2572923 Vibrio taketomensis 0.07 1 1 S 104609 Vibrio penaeicida 0.07 1 1 G1 2614977 unclassified Vibrio 0.41 6 0 G 657 Photobacterium 0.41 6 6 S 553611 Photobacterium leiognathi 0.07 1 0 G 188143 Enterovibrio 0.07 1 1 S 1927128 Candidatus Enterovibrio luxaltus 0.97 14 0 O 135622 Alteromonadales 0.41 6 1 F 267890 Shewanellaceae 0.35 5 0 G 22 Shewanella 0.21 3 3 S 712036 Shewanella dokdonensis 0.14 2 2 S 62322 Shewanella baltica 0.35 5 1 F 72275 Alteromonadaceae 0.28 4 0 F1 2903219 Alteromonas/Salinimonas group 0.28 4 0 G 226 Alteromonas 0.28 4 0 G1 2614992 unclassified Alteromonas 0.28 4 4 S 2267264 Alteromonas sp. RKMC-009 0.14 2 0 F 267888 Pseudoalteromonadaceae 0.14 2 0 G 2834759 Flocculibacter 0.14 2 2 S 2744479 Flocculibacter collagenilyticus 0.07 1 0 F 267893 Idiomarinaceae 0.07 1 0 G 2800384 Pseudidiomarina 0.07 1 1 S 1940690 Pseudidiomarina andamanensis 0.83 12 0 O 135624 Aeromonadales 0.83 12 2 F 84642 Aeromonadaceae 0.35 5 1 G 642 Aeromonas 0.28 4 4 S 654 Aeromonas veronii 0.21 3 0 G 225143 Oceanisphaera 0.21 3 3 S 1903694 Oceanisphaera avium 0.07 1 0 G 43947 Tolumonas 0.07 1 1 S 43948 Tolumonas auensis 0.07 1 0 G 2802288 Dongshaea 0.07 1 1 S 2047966 Dongshaea marina 0.83 12 0 O 72274 Pseudomonadales 0.76 11 1 F 135621 Pseudomonadaceae 0.62 9 6 G 286 Pseudomonas 0.07 1 0 G1 136845 Pseudomonas putida group 0.07 1 1 S 303 Pseudomonas putida 0.07 1 0 G1 136843 Pseudomonas fluorescens group 0.07 1 0 S 47883 Pseudomonas synxantha 0.07 1 1 S1 96901 Pseudomonas synxantha BG33R 0.07 1 0 G1 136841 Pseudomonas aeruginosa group 0.07 1 1 S 287 Pseudomonas aeruginosa 0.07 1 0 G 1654787 Thiopseudomonas 0.07 1 1 S 1697053 Thiopseudomonas alkaliphila 0.07 1 0 F 3085095 Pseudohongiellaceae 0.07 1 0 G 1524249 Pseudohongiella 0.07 1 1 S 1249552 Pseudohongiella spirulinae 0.69 10 0 O 135613 Chromatiales 0.41 6 0 F 1046 Chromatiaceae 0.14 2 2 G 1056 Thiocapsa 0.07 1 1 G 61593 Thiorhodovibrio 0.07 1 0 G 85072 Allochromatium 0.07 1 1 S 553982 Allochromatium tepidum 0.07 1 0 G 85076 Marichromatium 0.07 1 0 S 37487 Marichromatium purpuratum 0.07 1 1 S1 765910 Marichromatium purpuratum 984 0.07 1 0 G 156885 Thioflavicoccus 0.07 1 0 S 80679 Thioflavicoccus mobilis 0.07 1 1 S1 765912 Thioflavicoccus mobilis 8321 0.21 3 0 F 72276 Ectothiorhodospiraceae 0.14 2 1 G 1335745 Spiribacter 0.07 1 0 G1 2629425 unclassified Spiribacter 0.07 1 1 S 2666185 Spiribacter sp. 2438 0.07 1 0 G 233099 Ectothiorhodosinus 0.07 1 1 S 233100 Ectothiorhodosinus mongolicus 0.07 1 0 F 2035710 Thioalkalibacteraceae 0.07 1 0 G 2035712 Guyparkeria 0.07 1 1 S 47960 Guyparkeria halophila 0.28 4 0 C1 118884 Gammaproteobacteria incertae sedis 0.21 3 0 G 198346 Candidatus Palibaumannia 0.21 3 1 S 186490 Candidatus Palibaumannia cicadellinicola 0.14 2 2 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.07 1 0 G 1076625 Candidatus Steffania 0.07 1 1 S 1076626 Candidatus Steffania adelgidicola 0.14 2 0 O 118969 Legionellales 0.14 2 0 F 118968 Coxiellaceae 0.14 2 1 G 254245 Aquicella 0.07 1 1 S 254247 Aquicella siphonis 0.14 2 0 O 135618 Methylococcales 0.14 2 0 F 403 Methylococcaceae 0.07 1 0 G 429 Methylobacter 0.07 1 0 G1 2635283 unclassified Methylobacter 0.07 1 1 S 2911520 Methylobacter sp. YRD-M1 0.07 1 0 G 3135206 Candidatus Methylocalor 0.07 1 1 S 3108543 Candidatus Methylocalor cossyra 0.14 2 0 O 135619 Oceanospirillales 0.07 1 0 F 135620 Oceanospirillaceae 0.07 1 0 G 267849 Nitrincola 0.07 1 1 S 2614693 Nitrincola iocasae 0.07 1 0 F 224379 Hahellaceae 0.07 1 1 G 158481 Hahella 0.07 1 0 O 135615 Cardiobacteriales 0.07 1 0 F 868 Cardiobacteriaceae 0.07 1 0 G 869 Dichelobacter 0.07 1 1 S 870 Dichelobacter nodosus 0.07 1 0 O 1706369 Cellvibrionales 0.07 1 0 F 1706372 Halieaceae 0.07 1 0 G 2847769 Aequoribacter 0.07 1 1 S 2518989 Aequoribacter fuscus 4.01 58 3 C 28216 Betaproteobacteria 2.62 38 3 O 80840 Burkholderiales 0.97 14 0 F 119060 Burkholderiaceae 0.48 7 0 G 47670 Lautropia 0.48 7 7 S 47671 Lautropia mirabilis 0.28 4 1 G 48736 Ralstonia 0.21 3 1 G1 3116862 Ralstonia solanacearum species complex 0.14 2 2 S 305 Ralstonia solanacearum 0.07 1 0 G 32008 Burkholderia 0.07 1 0 G1 111527 pseudomallei group 0.07 1 1 S 28450 Burkholderia pseudomallei 0.07 1 1 G 93217 Pandoraea 0.07 1 0 G 106589 Cupriavidus 0.07 1 1 S 164546 Cupriavidus taiwanensis 0.83 12 2 F 75682 Oxalobacteraceae 0.28 4 3 F1 2895353 Telluria group 0.07 1 0 G 149698 Massilia 0.07 1 0 G1 2609279 unclassified Massilia 0.07 1 1 S 2709303 Massilia sp. Se16.2.3 0.21 3 3 G 29580 Janthinobacterium 0.21 3 1 G 401469 Undibacterium 0.14 2 0 G1 2630295 unclassified Undibacterium 0.14 2 2 S 3048609 Undibacterium sp. CCC3.4 0.28 4 0 F 506 Alcaligenaceae 0.28 4 0 G 1472344 Basilea 0.28 4 0 S 1472345 Basilea psittacipulmonis 0.28 4 4 S1 1072685 Basilea psittacipulmonis DSM 24701 0.21 3 0 O1 224471 Burkholderiales genera incertae sedis 0.07 1 1 G 32012 Thiomonas 0.07 1 0 G 114248 Tepidimonas 0.07 1 1 S 307486 Tepidimonas taiwanensis 0.07 1 0 G 2929841 Candidatus Ichthyocystis 0.07 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.07 1 0 F 80864 Comamonadaceae 0.07 1 1 G 34072 Variovorax 0.07 1 0 F 2975441 Sphaerotilaceae 0.07 1 0 G 196013 Caldimonas 0.07 1 1 S 376175 Schlegelella aquatica 0.62 9 0 O 206351 Neisseriales 0.62 9 6 F 481 Neisseriaceae 0.14 2 0 G 482 Neisseria 0.07 1 1 S 487 Neisseria meningitidis 0.07 1 0 G1 2623750 unclassified Neisseria 0.07 1 1 S 2912675 Neisseria sp. Dent CA1/247 0.07 1 1 G 59 Vitreoscilla 0.48 7 0 O 32003 Nitrosomonadales 0.28 4 0 F 2008793 Sterolibacteriaceae 0.28 4 0 G 3050898 Sulfuricystis 0.28 4 4 S 2211108 Sulfuricystis multivorans 0.14 2 0 F 90627 Gallionellaceae 0.07 1 0 G 2249462 Ferrigenium 0.07 1 1 S 1682490 Ferrigenium kumadai 0.07 1 0 G 2943286 Sideroxyarcus 0.07 1 1 S 2764705 Sideroxyarcus emersonii 0.07 1 1 F 206379 Nitrosomonadaceae 0.07 1 0 C1 119066 Betaproteobacteria incertae sedis 0.07 1 0 G 33055 Candidatus Kinetoplastibacterium 0.07 1 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.07 1 1 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 3.04 44 3 C 28211 Alphaproteobacteria 0.97 14 2 O 204457 Sphingomonadales 0.76 11 2 F 41297 Sphingomonadaceae 0.21 3 1 G 165696 Novosphingobium 0.14 2 2 S 13688 Novosphingobium capsulatum 0.21 3 2 G 13687 Sphingomonas 0.07 1 0 G1 196159 unclassified Sphingomonas 0.07 1 1 S 2937787 Sphingomonas sp. SUN039 0.07 1 1 G 165695 Sphingobium 0.07 1 1 G 165697 Sphingopyxis 0.07 1 0 G 1763827 Hankyongella 0.07 1 1 S 1763828 Hankyongella ginsenosidimutans 0.07 1 0 F 335929 Erythrobacteraceae 0.07 1 0 G 2827482 Caenibius 0.07 1 0 G1 2827483 unclassified Caenibius 0.07 1 1 S 2872646 Caenibius sp. WL 0.83 12 0 O 356 Hyphomicrobiales 0.62 9 2 F 119045 Methylobacteriaceae 0.35 5 5 G 407 Methylobacterium 0.14 2 1 G 186650 Microvirga 0.07 1 1 S 1882682 Microvirga ossetica 0.14 2 0 F 82115 Rhizobiaceae 0.14 2 1 F1 227290 Rhizobium/Agrobacterium group 0.07 1 0 G 1612611 Pararhizobium 0.07 1 1 G1 2643050 unclassified Pararhizobium 0.07 1 0 F 45401 Hyphomicrobiaceae 0.07 1 1 G 81 Hyphomicrobium 0.48 7 0 O 204441 Rhodospirillales 0.35 5 0 F 2844601 Stellaceae 0.35 5 0 G 93 Stella 0.35 5 5 S 94 Stella humosa 0.14 2 0 F 41295 Rhodospirillaceae 0.07 1 0 G 1081 Rhodospirillum 0.07 1 1 S 1085 Rhodospirillum rubrum 0.07 1 0 G 1612157 Pararhodospirillum 0.07 1 0 S 1084 Pararhodospirillum photometricum 0.07 1 1 S1 1150469 Pararhodospirillum photometricum DSM 122 0.35 5 0 O 204458 Caulobacterales 0.35 5 0 F 76892 Caulobacteraceae 0.35 5 4 G 41275 Brevundimonas 0.07 1 0 G1 2622653 unclassified Brevundimonas 0.07 1 1 S 2591463 Brevundimonas sp. M20 0.14 2 1 O 204455 Rhodobacterales 0.07 1 0 F 31989 Paracoccaceae 0.07 1 0 G 34008 Rhodovulum 0.07 1 0 G1 2631432 unclassified Rhodovulum 0.07 1 1 S 1564506 Rhodovulum sp. P5 0.07 1 0 O 2800060 Hyphomonadales 0.07 1 0 F 69657 Hyphomonadaceae 0.07 1 1 G 85 Hyphomonas 0.07 1 0 C 1807140 Acidithiobacillia 0.07 1 0 O 225057 Acidithiobacillales 0.07 1 0 F 225058 Acidithiobacillaceae 0.07 1 0 G 119977 Acidithiobacillus 0.07 1 0 G1 2614800 unclassified Acidithiobacillus 0.07 1 1 S 2994951 Acidithiobacillus sp. AMEEHan 27.90 404 6 D1 1783272 Terrabacteria group 21.13 306 4 P 1239 Bacillota 19.89 288 3 C 91061 Bacilli 15.75 228 8 O 186826 Lactobacillales 8.98 130 0 F 1300 Streptococcaceae 8.91 129 65 G 1301 Streptococcus 1.93 28 27 S 1308 Streptococcus thermophilus 0.07 1 1 S1 767463 Streptococcus thermophilus ND03 0.55 8 8 S 1314 Streptococcus pyogenes 0.48 7 0 G1 671232 Streptococcus anginosus group 0.41 6 6 S 1328 Streptococcus anginosus 0.07 1 1 S 1338 Streptococcus intermedius 0.41 6 3 S 1313 Streptococcus pneumoniae 0.14 2 2 S1 869311 Streptococcus pneumoniae SPN032672 0.07 1 1 S1 1159083 Streptococcus pneumoniae PCS8235 0.21 3 3 S 68892 Streptococcus infantis 0.14 2 2 S 1305 Streptococcus sanguinis 0.14 2 2 S 2490633 Streptococcus periodonticum 0.14 2 1 S 1311 Streptococcus agalactiae 0.07 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.07 1 1 S 1345 Streptococcus ferus 0.07 1 1 S 1341 Streptococcus ratti 0.07 1 1 S 1348 Streptococcus parauberis 0.07 1 1 S 1335 Streptococcus equinus 0.07 1 1 S 1310 Streptococcus sobrinus 0.07 1 1 S 1304 Streptococcus salivarius 0.07 1 0 G 1357 Lactococcus 0.07 1 1 S 1359 Lactococcus cremoris 4.70 68 0 F 81852 Enterococcaceae 4.70 68 0 G 1350 Enterococcus 4.70 68 68 S 1351 Enterococcus faecalis 0.76 11 2 F 33958 Lactobacillaceae 0.14 2 0 G 1578 Lactobacillus 0.07 1 0 S 1584 Lactobacillus delbrueckii 0.07 1 0 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.07 1 1 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.07 1 0 G1 2620435 unclassified Lactobacillus 0.07 1 1 S 1545702 Lactobacillus sp. wkB8 0.07 1 0 G 2767842 Lactiplantibacillus 0.07 1 1 S 1590 Lactiplantibacillus plantarum 0.07 1 0 G 2767886 Levilactobacillus 0.07 1 1 S 1580 Levilactobacillus brevis 0.07 1 0 G 2767881 Fructilactobacillus 0.07 1 1 S 1625 Fructilactobacillus sanfranciscensis 0.07 1 1 G 2767889 Loigolactobacillus 0.07 1 0 G 2759736 Lacticaseibacillus 0.07 1 1 S 1597 Lacticaseibacillus paracasei 0.07 1 0 G 46255 Weissella 0.07 1 1 S 137591 Weissella cibaria 0.07 1 1 G 1243 Leuconostoc 0.48 7 0 F 186828 Carnobacteriaceae 0.28 4 0 G 82800 Desemzia 0.28 4 4 S 82801 Desemzia incerta 0.21 3 0 G 117563 Granulicatella 0.14 2 2 S 137732 Granulicatella elegans 0.07 1 1 S 46124 Granulicatella adiacens 0.28 4 0 F 186827 Aerococcaceae 0.14 2 0 G 66831 Facklamia 0.14 2 2 S 178214 Facklamia hominis 0.14 2 0 G 2862144 Ruoffia 0.14 2 2 S 87458 Ruoffia tabacinasalis 3.94 57 5 O 1385 Bacillales 2.21 32 2 F 186817 Bacillaceae 0.76 11 0 G 1386 Bacillus 0.62 9 0 G1 653685 Bacillus subtilis group 0.55 8 0 G2 1938374 Bacillus amyloliquefaciens group 0.35 5 5 S 492670 Bacillus velezensis 0.21 3 3 S 1390 Bacillus amyloliquefaciens 0.07 1 0 S 1423 Bacillus subtilis 0.07 1 1 S1 135461 Bacillus subtilis subsp. subtilis 0.14 2 0 G1 86661 Bacillus cereus group 0.07 1 1 S 1428 Bacillus thuringiensis 0.07 1 1 S 1392 Bacillus anthracis 0.55 8 0 G 2837504 Heyndrickxia 0.55 8 8 S 1398 Heyndrickxia coagulans 0.21 3 0 G 175304 Lentibacillus 0.14 2 2 S 1472767 Lentibacillus amyloliquefaciens 0.07 1 0 G1 2614679 unclassified Lentibacillus 0.07 1 1 S 2518176 Lentibacillus sp. CBA3610 0.14 2 0 G 45667 Halobacillus 0.14 2 2 S 45668 Halobacillus litoralis 0.07 1 0 G 2675230 Cytobacillus 0.07 1 1 S 1399 Cytobacillus firmus 0.07 1 0 G 2800373 Priestia 0.07 1 1 S 1404 Priestia megaterium 0.07 1 0 G 2893057 Shouchella 0.07 1 1 S 79880 Shouchella clausii 0.07 1 1 G 2685905 Salicibibacter 0.07 1 0 G 129337 Geobacillus 0.07 1 1 S 1921421 Geobacillus genomosp. 3 0.07 1 0 G 84406 Virgibacillus 0.07 1 1 S 447199 Virgibacillus salarius 0.69 10 0 F 90964 Staphylococcaceae 0.62 9 1 G 1279 Staphylococcus 0.21 3 3 S 1280 Staphylococcus aureus 0.14 2 2 S 70255 Staphylococcus condimenti 0.07 1 1 S 1282 Staphylococcus epidermidis 0.07 1 1 S 1286 Staphylococcus simulans 0.07 1 1 S 46126 Staphylococcus chromogenes 0.07 1 0 G 45669 Salinicoccus 0.07 1 0 G1 2628837 unclassified Salinicoccus 0.07 1 1 S 3136731 Salinicoccus sp. Bachu38 0.14 2 0 F 186820 Listeriaceae 0.14 2 0 G 1637 Listeria 0.07 1 0 S 1638 Listeria ivanovii 0.07 1 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.07 1 1 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.07 1 1 S 1639 Listeria monocytogenes 0.14 2 0 F 186822 Paenibacillaceae 0.14 2 0 G 44249 Paenibacillus 0.07 1 1 S 1406 Paenibacillus polymyxa 0.07 1 0 G1 185978 unclassified Paenibacillus 0.07 1 1 S 715179 Paenibacillus sp. sptzw28 0.14 2 0 O1 539002 Bacillales incertae sedis 0.14 2 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.14 2 2 G 33986 Exiguobacterium 0.14 2 0 F 539738 Gemellaceae 0.14 2 2 G 1378 Gemella 0.07 1 0 F 186821 Sporolactobacillaceae 0.07 1 1 G 2077 Sporolactobacillus 0.07 1 0 F 186823 Alicyclobacillaceae 0.07 1 0 G 432330 Tumebacillus 0.07 1 1 S 1903704 Tumebacillus avium 0.62 9 0 C 186801 Clostridia 0.35 5 2 O 186802 Eubacteriales 0.07 1 1 F 31984 Heliobacteriaceae 0.07 1 1 F 186806 Eubacteriaceae 0.07 1 0 F 216572 Oscillospiraceae 0.07 1 1 G 216851 Faecalibacterium 0.14 2 0 O 53433 Halanaerobiales 0.14 2 0 F 53434 Halobacteroidaceae 0.14 2 0 G 42417 Halobacteroides 0.14 2 0 S 42422 Halobacteroides halobius 0.14 2 2 S1 748449 Halobacteroides halobius DSM 5150 0.14 2 0 O 3085636 Lachnospirales 0.14 2 0 F 186803 Lachnospiraceae 0.14 2 0 G 28050 Lachnospira 0.14 2 2 S 39485 Lachnospira eligens 0.14 2 0 C 909932 Negativicutes 0.14 2 0 O 1843489 Veillonellales 0.14 2 0 F 31977 Veillonellaceae 0.07 1 0 G 29465 Veillonella 0.07 1 1 S 29466 Veillonella parvula 0.07 1 0 G 39948 Dialister 0.07 1 1 S 487173 Dialister succinatiphilus 0.14 2 0 C 1737404 Tissierellia 0.14 2 0 O 1737405 Tissierellales 0.14 2 0 F 1570339 Peptoniphilaceae 0.14 2 0 G 150022 Finegoldia 0.14 2 2 S 1260 Finegoldia magna 0.07 1 0 C 526524 Erysipelotrichia 0.07 1 0 O 526525 Erysipelotrichales 0.07 1 0 F 2810280 Coprobacillaceae 0.07 1 0 G 2943184 Tannockella 0.07 1 1 S 2899121 Tannockella kyphosi 5.32 77 2 P 201174 Actinomycetota 5.18 75 4 C 1760 Actinomycetes 2.07 30 1 O 85009 Propionibacteriales 2.00 29 10 F 31957 Propionibacteriaceae 0.90 13 2 G 1912216 Cutibacterium 0.76 11 11 S 1747 Cutibacterium acnes 0.14 2 2 G 29404 Microlunatus 0.14 2 1 G 2801844 Arachnia 0.07 1 1 S 1750 Arachnia propionica 0.07 1 0 G 1911549 Raineyella 0.07 1 1 S 2662261 Raineyella fluvialis 0.07 1 0 G 1912215 Acidipropionibacterium 0.07 1 1 S 1749 Acidipropionibacterium jensenii 1.52 22 2 O 85006 Micrococcales 1.24 18 0 F 1268 Micrococcaceae 1.04 15 3 G 32207 Rothia 0.48 7 7 S 2047 Rothia dentocariosa 0.21 3 3 S 43675 Rothia mucilaginosa 0.14 2 2 S 172042 Rothia aeria 0.14 2 2 G 1269 Micrococcus 0.07 1 1 G 57493 Kocuria 0.07 1 0 F 2805591 Tropherymataceae 0.07 1 0 G 2038 Tropheryma 0.07 1 1 S 2039 Tropheryma whipplei 0.07 1 1 F 85023 Microbacteriaceae 0.41 6 0 O 85007 Mycobacteriales 0.35 5 0 F 1653 Corynebacteriaceae 0.35 5 3 G 1716 Corynebacterium 0.07 1 1 S 38289 Corynebacterium jeikeium 0.07 1 1 S 43771 Corynebacterium urealyticum 0.07 1 0 F 1762 Mycobacteriaceae 0.07 1 0 G 1763 Mycobacterium 0.07 1 0 G1 2993898 Mycobacterium ulcerans group 0.07 1 1 S 133549 Mycobacterium shottsii 0.41 6 0 O 2037 Actinomycetales 0.41 6 4 F 2049 Actinomycetaceae 0.07 1 0 G 28263 Arcanobacterium 0.07 1 1 S 28264 Arcanobacterium haemolyticum 0.07 1 0 G 1522056 Flaviflexus 0.07 1 1 S 2496867 Flaviflexus ciconiae 0.21 3 0 O 85011 Kitasatosporales 0.21 3 1 F 2062 Streptomycetaceae 0.14 2 0 G 1883 Streptomyces 0.07 1 1 S 35621 Streptomyces mobaraensis 0.07 1 0 G1 2593676 unclassified Streptomyces 0.07 1 1 S 2099584 Streptomyces sp. ICC4 0.07 1 0 O 85004 Bifidobacteriales 0.07 1 0 F 31953 Bifidobacteriaceae 0.07 1 0 G 1678 Bifidobacterium 0.07 1 0 S 216816 Bifidobacterium longum 0.07 1 1 S1 1682 Bifidobacterium longum subsp. infantis 0.07 1 0 O 85010 Pseudonocardiales 0.07 1 0 F 2070 Pseudonocardiaceae 0.07 1 0 G 1835 Saccharopolyspora 0.07 1 0 G1 2646250 unclassified Saccharopolyspora 0.07 1 1 S 3118084 Saccharopolyspora sp. SCSIO 74807 0.07 1 0 O 2039638 Candidatus Nanopelagicales 0.07 1 0 F 2162846 Candidatus Nanopelagicaceae 0.07 1 0 G 2039639 Candidatus Nanopelagicus 0.07 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.07 1 0 O 1643682 Geodermatophilales 0.07 1 0 F 85030 Geodermatophilaceae 0.07 1 1 G 88138 Modestobacter 0.69 10 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.69 10 0 P 1117 Cyanobacteriota 0.69 10 3 C 3028117 Cyanophyceae 0.35 5 0 C1 1301283 Oscillatoriophycideae 0.28 4 0 O 1150 Oscillatoriales 0.28 4 0 F 2934961 Sirenicapillariaceae 0.28 4 0 G 2596745 Limnospira 0.28 4 0 S 147322 Limnospira indica 0.28 4 4 S1 2760438 Limnospira indica BM01 0.07 1 0 O 1118 Chroococcales 0.07 1 0 F 1890450 Aphanothecaceae 0.07 1 0 G 1453359 Candidatus Atelocyanobacterium 0.07 1 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.07 1 1 S1 1285375 cyanobacterium endosymbiont of Braarudosphaera bigelowii 0.14 2 1 O 1890424 Synechococcales 0.07 1 0 F 2881426 Prochlorococcaceae 0.07 1 1 G 1218 Prochlorococcus 0.21 3 2 P 544448 Mycoplasmatota 0.07 1 0 C 31969 Mollicutes 0.07 1 0 O 2085 Mycoplasmatales 0.07 1 0 F 2092 Mycoplasmataceae 0.07 1 0 G 2093 Mycoplasma 0.07 1 0 G1 656088 Mycoplasma mycoides group 0.07 1 1 S 1179777 Mycoplasma feriruminatoris 0.07 1 0 P 1297 Deinococcota 0.07 1 0 C 188787 Deinococci 0.07 1 0 O 118964 Deinococcales 0.07 1 0 F 183710 Deinococcaceae 0.07 1 1 G 1298 Deinococcus 0.07 1 0 P 200795 Chloroflexota 0.07 1 0 C 388447 Ktedonobacteria 0.07 1 0 O 388448 Ktedonobacterales 0.07 1 0 F 2692416 Ktedonosporobacteraceae 0.07 1 0 G 2692417 Ktedonosporobacter 0.07 1 1 S 2509675 Ktedonosporobacter rubrisoli 1.80 26 0 D1 1783270 FCB group 1.80 26 0 D2 68336 Bacteroidota/Chlorobiota group 1.80 26 0 P 976 Bacteroidota 1.45 21 0 C 768503 Cytophagia 1.45 21 0 O 768507 Cytophagales 1.24 18 0 F 89373 Cytophagaceae 1.24 18 0 G 107 Spirosoma 1.24 18 18 S 2666025 Spirosoma endbachense 0.07 1 0 F 1937968 Bernardetiaceae 0.07 1 0 G 1937972 Bernardetia 0.07 1 1 G1 2647129 unclassified Bernardetia 0.07 1 0 F 2762286 Fulvivirgaceae 0.07 1 0 G 1433993 Chryseolinea 0.07 1 1 S 2321403 Chryseolinea soli 0.07 1 0 F 2896860 Spirosomataceae 0.07 1 0 G 105 Runella 0.07 1 0 G1 2631759 unclassified Runella 0.07 1 1 S 2268026 Runella sp. SP2 0.21 3 0 C 200643 Bacteroidia 0.21 3 0 O 171549 Bacteroidales 0.14 2 0 F 171552 Prevotellaceae 0.14 2 1 G 838 Prevotella 0.07 1 0 G1 2638335 unclassified Prevotella 0.07 1 1 S 712471 Prevotella sp. oral taxon 475 0.07 1 0 F 171551 Porphyromonadaceae 0.07 1 0 G 836 Porphyromonas 0.07 1 1 S 322095 Porphyromonas somerae 0.07 1 0 C 117743 Flavobacteriia 0.07 1 0 O 200644 Flavobacteriales 0.07 1 0 F 49546 Flavobacteriaceae 0.07 1 0 G 2715289 Amniculibacterium 0.07 1 0 G1 2767187 unclassified Amniculibacterium 0.07 1 1 S 2767188 Amniculibacterium sp. G2-70 0.07 1 0 C 117747 Sphingobacteriia 0.07 1 0 O 200666 Sphingobacteriales 0.07 1 0 F 84566 Sphingobacteriaceae 0.07 1 1 G 28453 Sphingobacterium 0.48 7 0 P 32066 Fusobacteriota 0.48 7 0 C 203490 Fusobacteriia 0.48 7 0 O 203491 Fusobacteriales 0.48 7 0 F 1129771 Leptotrichiaceae 0.48 7 4 G 32067 Leptotrichia 0.07 1 1 S 157687 Leptotrichia wadei 0.07 1 1 S 157691 Leptotrichia shahii 0.07 1 1 S 554406 Leptotrichia hongkongensis 0.48 7 1 P 200940 Thermodesulfobacteriota 0.35 5 0 C 3031651 Desulfuromonadia 0.21 3 0 O 69541 Desulfuromonadales 0.21 3 0 F 213421 Desulfuromonadaceae 0.21 3 3 G 890 Desulfuromonas 0.14 2 0 O 3031668 Geobacterales 0.14 2 0 F 213422 Geobacteraceae 0.14 2 0 G 28231 Geobacter 0.14 2 1 G1 2627627 unclassified Geobacter 0.07 1 1 S 1277350 Geobacter sp. DSM 9736 0.07 1 0 C 3031449 Desulfovibrionia 0.07 1 0 O 213115 Desulfovibrionales 0.07 1 0 F 194924 Desulfovibrionaceae 0.07 1 1 G 2035811 Pseudodesulfovibrio 0.14 2 0 P 29547 Campylobacterota 0.14 2 0 C 3031852 Epsilonproteobacteria 0.14 2 0 O 213849 Campylobacterales 0.14 2 0 F 72293 Helicobacteraceae 0.14 2 1 G 209 Helicobacter 0.07 1 1 S 135569 Helicobacter apodemus 0.14 2 0 D1 1783257 PVC group 0.07 1 0 P 134625 Kiritimatiellota 0.07 1 0 C 2907184 Tichowtungiia 0.07 1 0 O 2907185 Tichowtungiales 0.07 1 0 F 2907186 Tichowtungiaceae 0.07 1 0 G 2907187 Tichowtungia 0.07 1 1 S 2697043 Tichowtungia aerotolerans 0.07 1 0 P 203682 Planctomycetota 0.07 1 1 C 203683 Planctomycetia 0.07 1 0 D1 2323 Bacteria incertae sedis 0.07 1 0 D2 1783234 Bacteria candidate phyla 0.07 1 0 D3 95901 Candidatus Dependentiae 0.07 1 0 C 2497643 Candidatus Babeliae 0.07 1 0 O 2497644 Candidatus Babeliales 0.07 1 0 F 2953756 Candidatus Chromulinivoraceae 0.07 1 0 G 2953757 Candidatus Chromulinivorax 0.07 1 1 S 2066483 Candidatus Chromulinivorax destructor