0.53 84 84 U 0 unclassified 99.47 15830 7 R 1 root 99.43 15823 0 R1 131567 cellular organisms 99.43 15823 4469 D 2 Bacteria 54.09 8608 89 P 1224 Pseudomonadota 50.25 7996 522 C 1236 Gammaproteobacteria 38.59 6141 473 O 91347 Enterobacterales 32.20 5124 625 F 543 Enterobacteriaceae 15.70 2499 39 G 561 Escherichia 15.30 2435 2278 S 562 Escherichia coli 0.21 33 33 S1 316435 Escherichia coli Nissle 1917 0.19 31 4 S1 83334 Escherichia coli O157:H7 0.16 25 25 S2 155864 Escherichia coli O157:H7 str. EDL933 0.01 2 2 S2 502346 Escherichia coli O157:H7 str. TW14588 0.16 26 26 S1 2079157 Escherichia coli O2:H1 0.09 14 14 S1 655817 Escherichia coli ABU 83972 0.08 13 13 S1 2874053 Escherichia coli O25:H1 0.08 13 13 S1 1446600 Escherichia coli O15:H18 0.06 10 10 S1 331112 Escherichia coli HS 0.05 8 8 S1 1322345 Escherichia coli ATCC 25922 0.03 5 5 S1 244320 Escherichia coli O55:H7 0.02 3 3 S1 362663 Escherichia coli 536 0.01 1 0 S1 1038927 Escherichia coli O104:H4 0.01 1 1 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.09 15 15 S 1499973 Escherichia marmotae 0.05 8 8 S 208962 Escherichia albertii 0.01 2 2 S 564 Escherichia fergusonii 4.98 792 15 G 590 Salmonella 4.71 749 194 S 28901 Salmonella enterica 3.49 555 22 S1 59201 Salmonella enterica subsp. enterica 1.06 169 169 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.70 111 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.66 105 105 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.03 4 4 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 2 2 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.39 62 62 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.29 46 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.26 41 41 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.03 4 4 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.24 38 38 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.21 33 33 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.14 22 20 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.01 2 2 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.09 14 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.09 14 14 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.06 10 10 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.06 10 10 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.06 9 9 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.03 4 1 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.02 3 3 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.01 2 2 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.01 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.01 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.01 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.01 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.18 28 0 S 54736 Salmonella bongori 0.18 28 28 S1 1299282 Salmonella bongori CFSAN000510 3.90 621 0 G 547 Enterobacter 3.83 610 0 G1 354276 Enterobacter cloacae complex 2.70 429 429 S 299767 Enterobacter ludwigii 1.00 159 158 S 158836 Enterobacter hormaechei 0.01 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.05 8 8 S 208224 Enterobacter kobei 0.04 6 1 S 550 Enterobacter cloacae 0.03 5 5 S1 336306 Enterobacter cloacae subsp. cloacae 0.03 5 5 S 61645 Enterobacter asburiae 0.01 2 2 S 1812935 Enterobacter roggenkampii 0.01 1 1 S 3029761 Enterobacter pasteurii 0.07 11 11 S 881260 Enterobacter bugandensis 1.74 277 0 F1 2890311 Klebsiella/Raoultella group 1.74 277 7 G 570 Klebsiella 1.38 219 180 S 573 Klebsiella pneumoniae 0.16 25 25 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.09 14 14 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.18 29 11 S 1463165 Klebsiella quasipneumoniae 0.11 18 18 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.06 9 2 S 244366 Klebsiella variicola 0.04 7 7 S1 640131 Klebsiella variicola At-22 0.04 6 6 S 1134687 Klebsiella michiganensis 0.03 4 4 S 548 Klebsiella aerogenes 0.01 2 2 S 2153354 Klebsiella huaxiensis 0.01 1 0 G1 2608929 unclassified Klebsiella 0.01 1 1 S 2851540 Klebsiella sp. PL-2018 0.37 59 0 G 544 Citrobacter 0.31 49 0 G1 1344959 Citrobacter freundii complex 0.13 20 20 S 1639133 Citrobacter portucalensis 0.08 13 13 S 67828 Citrobacter gillenii 0.06 9 0 G2 2816438 unclassified Citrobacter freundii complex 0.06 9 9 S 1686385 Citrobacter sp. BIDMC108 0.04 6 6 S 546 Citrobacter freundii 0.01 1 1 S 67827 Citrobacter werkmanii 0.04 6 0 S 35703 Citrobacter amalonaticus 0.04 6 6 S1 1261127 Citrobacter amalonaticus Y19 0.02 3 3 S 2971264 Citrobacter enshiensis 0.01 1 1 S 545 Citrobacter koseri 0.31 49 0 G 620 Shigella 0.31 49 49 S 623 Shigella flexneri 0.27 43 0 F1 191675 Enterobacteriaceae incertae sedis 0.27 43 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.19 31 0 F3 84564 ant endosymbionts 0.13 20 0 G 203804 Candidatus Blochmanniella 0.10 16 5 G1 711328 unclassified Candidatus Blochmanniella 0.06 9 9 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.01 2 2 S 2681986 Blochmannia endosymbiont of Camponotus nipponensis 0.02 3 3 S 251538 Candidatus Blochmannia ocreatus 0.01 1 0 S 251535 Candidatus Blochmanniella vafra 0.01 1 1 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.07 11 0 G 1699619 Candidatus Westeberhardia 0.07 11 11 S 1594731 Candidatus Westeberhardia cardiocondylae 0.04 7 0 F3 146507 aphid secondary symbionts 0.03 4 4 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.01 2 2 S 134287 secondary endosymbiont of Heteropsylla cubana 0.01 1 1 G 568987 Candidatus Hamiltonella 0.02 3 0 G 1302410 Candidatus Annandia 0.02 3 3 S 1302411 Candidatus Annandia adelgestsuga 0.01 1 0 G 1906659 Candidatus Hoaglandella 0.01 1 1 S 1778263 Candidatus Hoaglandella endobia 0.01 1 0 G 1906660 Candidatus Mikella 0.01 1 1 S 1778264 Candidatus Mikella endobia 0.25 40 3 F1 36866 unclassified Enterobacteriaceae 0.11 17 17 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.10 16 16 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 2 2 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 1 1 S 2675790 Enterobacteriaceae endosymbiont of Macroplea appendiculata 0.01 1 1 S 2675782 Enterobacteriaceae endosymbiont of Donacia proxima 0.23 36 0 G 1330547 Kosakonia 0.19 31 31 S 208223 Kosakonia cowanii 0.03 5 5 S 283686 Kosakonia radicincitans 0.16 26 0 G 2815296 Jejubacter 0.16 26 26 S 2579935 Jejubacter calystegiae 0.09 14 0 G 409304 Candidatus Ishikawella 0.09 14 0 S 168169 Candidatus Ishikawella capsulata 0.09 14 14 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.08 13 0 G 1048757 Candidatus Moranella 0.08 13 13 S 1048758 Candidatus Moranella endobia 0.06 10 0 G 1330545 Lelliottia 0.06 10 10 S 61646 Lelliottia amnigena 0.04 7 0 G 2303321 Superficieibacter 0.04 7 0 G1 2645744 unclassified Superficieibacter 0.04 7 7 S 3031919 Superficieibacter sp. HKU1 0.03 5 0 G 1177214 Candidatus Profftia 0.03 5 0 G1 2735709 unclassified Candidatus Profftia 0.03 5 5 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.02 3 0 G 2726810 Scandinavium 0.02 3 3 S 1851514 Scandinavium goeteborgense 0.01 2 0 G 702 Plesiomonas 0.01 2 2 S 703 Plesiomonas shigelloides 0.01 2 1 G 401618 Candidatus Riesia 0.01 1 1 S 401619 Candidatus Riesia pediculicola 0.01 1 0 G 1649295 Franconibacter 0.01 1 1 S 2047724 Franconibacter daqui 1.52 242 0 F 2812006 Bruguierivoracaceae 1.52 242 0 G 84565 Sodalis 1.21 192 192 S 2697027 Sodalis ligni 0.26 42 0 S 1486991 Candidatus Sodalis pierantonius 0.26 42 42 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.03 5 0 G1 2636512 unclassified Sodalis 0.03 5 5 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.02 3 3 S 1239307 Sodalis praecaptivus 0.76 121 0 F 1903411 Yersiniaceae 0.45 71 0 G 613 Serratia 0.25 40 40 S 138074 Serratia symbiotica 0.08 12 12 S 614 Serratia liquefaciens 0.07 11 11 S 61652 Serratia rubidaea 0.04 6 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.04 6 6 S 2785630 Serratia sp. CMO1 0.01 2 0 S 82996 Serratia plymuthica 0.01 2 2 S1 1006598 Serratia plymuthica RVH1 0.30 47 0 G 629 Yersinia 0.26 42 0 G1 1649845 Yersinia pseudotuberculosis complex 0.26 42 1 S 632 Yersinia pestis 0.19 30 30 S1 748678 Yersinia pestis str. Pestoides B 0.03 4 4 S1 360102 Yersinia pestis Antiqua 0.03 4 4 S1 649716 Yersinia pestis Pestoides G 0.02 3 3 S1 1345701 Yersinia pestis 790 0.03 5 5 S 935293 Yersinia entomophaga 0.02 3 3 G 1927833 Candidatus Fukatsuia 0.49 78 1 F 1903414 Morganellaceae 0.17 27 1 G 637 Arsenophonus 0.11 17 17 S 638 Arsenophonus nasoniae 0.04 6 0 G1 2627083 unclassified Arsenophonus 0.02 3 3 S 3041619 Arsenophonus sp. aPb 0.02 3 3 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.02 3 3 S 634113 Candidatus Arsenophonus lipoptenae 0.14 22 0 G 581 Morganella 0.14 22 20 S 582 Morganella morganii 0.01 2 2 S1 180434 Morganella morganii subsp. morganii 0.09 15 0 G 583 Proteus 0.09 15 15 S 584 Proteus mirabilis 0.04 7 0 G 626 Xenorhabdus 0.03 5 0 S 40577 Xenorhabdus poinarii 0.03 5 5 S1 1354304 Xenorhabdus poinarii G6 0.01 2 2 S 290110 Xenorhabdus budapestensis 0.03 4 4 G 29487 Photorhabdus 0.01 2 0 G 586 Providencia 0.01 1 0 S 516075 Providencia sneebia 0.01 1 1 S1 1141660 Providencia sneebia DSM 19967 0.01 1 1 S 1715285 Candidatus Providencia siddallii 0.30 48 0 F 1903410 Pectobacteriaceae 0.18 28 9 G 204037 Dickeya 0.06 10 10 S 1089444 Dickeya solani 0.05 8 8 S 1778540 Dickeya fangzhongdai 0.01 1 0 S 204038 Dickeya dadantii 0.01 1 1 S1 1224149 Dickeya dadantii NCPPB 3537 0.12 19 0 G 122277 Pectobacterium 0.06 9 9 S 1905730 Pectobacterium parmentieri 0.04 7 7 S 2488639 Pectobacterium versatile 0.01 2 0 G1 2627739 unclassified Pectobacterium 0.01 2 2 S 2738983 Pectobacterium sp. PL64 0.01 1 1 S 2485124 Pectobacterium polonicum 0.01 1 0 G 71655 Brenneria 0.01 1 1 S 1109412 Brenneria goodwinii 0.28 45 1 F 1903409 Erwiniaceae 0.15 24 4 G 53335 Pantoea 0.09 14 14 S 59814 Pantoea dispersa 0.03 5 5 S 1235990 Candidatus Pantoea carbekii 0.01 1 1 G1 2630326 unclassified Pantoea 0.06 10 0 G 551 Erwinia 0.04 7 0 G1 2622719 unclassified Erwinia 0.04 7 7 S 215689 Erwinia sp. Ejp617 0.01 2 2 S 65700 Erwinia tracheiphila 0.01 1 1 S 1922217 Candidatus Erwinia haradaeae 0.05 8 0 G 32199 Buchnera 0.05 8 6 S 9 Buchnera aphidicola 0.01 2 2 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.01 2 0 G 2997349 Winslowiella 0.01 2 2 S 92490 Winslowiella toletana 0.06 9 0 F 1903412 Hafniaceae 0.06 9 8 G 635 Edwardsiella 0.01 1 1 S 636 Edwardsiella tarda 0.01 1 0 F 3120698 Gallaecimonadaceae 0.01 1 0 G 745410 Gallaecimonas 0.01 1 1 S 3029055 Gallaecimonas kandeliae 1.96 312 0 O 135623 Vibrionales 1.96 312 21 F 641 Vibrionaceae 1.62 258 0 G 662 Vibrio 0.72 114 0 G1 2614977 unclassified Vibrio 0.67 106 106 S 2589990 Vibrio sp. Scap24 0.05 8 8 S 2661921 Vibrio sp. THAF191c 0.64 102 0 S 52443 Vibrio tapetis 0.64 102 102 S1 1671868 Vibrio tapetis subsp. tapetis 0.11 18 18 S 666 Vibrio cholerae 0.06 10 0 G1 717610 Vibrio harveyi group 0.03 5 5 S 670 Vibrio parahaemolyticus 0.03 4 4 S 669 Vibrio harveyi 0.01 1 1 S 663 Vibrio alginolyticus 0.06 10 10 S 2572923 Vibrio taketomensis 0.01 2 0 G1 87806 environmental samples 0.01 2 2 S 114054 uncultured Vibrio sp. 0.01 1 0 S 672 Vibrio vulnificus 0.01 1 1 S1 914127 Vibrio vulnificus MO6-24/O 0.01 1 1 S 29495 Vibrio navarrensis 0.21 33 0 G 657 Photobacterium 0.16 25 10 S 553611 Photobacterium leiognathi 0.09 15 15 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.05 8 0 S 38293 Photobacterium damselae 0.04 6 6 S1 38294 Photobacterium damselae subsp. piscicida 0.01 2 2 S1 85581 Photobacterium damselae subsp. damselae 1.79 285 0 O 135625 Pasteurellales 1.79 285 0 F 712 Pasteurellaceae 1.72 274 0 G 713 Actinobacillus 1.70 270 0 S 718 Actinobacillus equuli 1.70 270 270 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.02 3 3 S 157339 Actinobacillus arthritidis 0.01 1 0 S 715 Actinobacillus pleuropneumoniae 0.01 1 0 S1 754344 Actinobacillus pleuropneumoniae serovar 6 0.01 1 1 S2 754256 Actinobacillus pleuropneumoniae serovar 6 str. Femo 0.03 4 0 G 724 Haemophilus 0.03 4 4 S 729 Haemophilus parainfluenzae 0.03 4 0 G 2899790 Mergibacter 0.03 4 4 S 221402 Mergibacter septicus 0.01 1 0 G 155493 Gallibacterium 0.01 1 1 S 750 Gallibacterium anatis 0.01 1 0 G 2094023 Glaesserella 0.01 1 0 G1 2629322 unclassified Glaesserella 0.01 1 1 S 2030797 Glaesserella sp. 15-184 0.01 1 0 G 745 Pasteurella 0.01 1 1 S 747 Pasteurella multocida 1.03 164 0 O 135624 Aeromonadales 1.02 162 15 F 84642 Aeromonadaceae 0.58 92 1 G 642 Aeromonas 0.43 68 68 S 654 Aeromonas veronii 0.06 10 10 S 652 Aeromonas schubertii 0.05 8 0 G1 257493 unclassified Aeromonas 0.05 8 8 S 2560029 Aeromonas sp. 2692-1 0.02 3 3 S 648 Aeromonas caviae 0.01 2 2 S 645 Aeromonas salmonicida 0.31 50 0 G 225143 Oceanisphaera 0.31 50 50 S 1903694 Oceanisphaera avium 0.03 5 0 G 43947 Tolumonas 0.03 4 4 S 43948 Tolumonas auensis 0.01 1 0 G1 263764 environmental samples 0.01 1 1 S 263765 uncultured Tolumonas sp. 0.01 2 0 F 83763 Succinivibrionaceae 0.01 2 0 G 83770 Succinivibrio 0.01 2 2 S 83771 Succinivibrio dextrinosolvens 0.83 132 0 O 2887326 Moraxellales 0.83 132 6 F 468 Moraxellaceae 0.62 98 6 G 469 Acinetobacter 0.50 79 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.32 51 51 S 470 Acinetobacter baumannii 0.18 28 28 S 48296 Acinetobacter pittii 0.03 5 5 S 202956 Acinetobacter towneri 0.03 5 3 G1 196816 unclassified Acinetobacter 0.01 1 1 S 2929509 Acinetobacter sp. NyZ410 0.01 1 1 S 2919376 Acinetobacter sp. AOR07_HL 0.02 3 3 S 40214 Acinetobacter johnsonii 0.15 24 5 G 475 Moraxella 0.08 12 12 S 2904120 Moraxella nasibovis 0.04 7 7 S 90241 Moraxella lincolnii 0.03 4 2 G 497 Psychrobacter 0.01 2 2 G1 196806 unclassified Psychrobacter 0.78 124 0 O 72274 Pseudomonadales 0.74 117 2 F 135621 Pseudomonadaceae 0.68 108 28 G 286 Pseudomonas 0.14 23 1 G1 196821 unclassified Pseudomonas 0.11 18 18 S 2025658 Pseudomonas sp. NS1(2017) 0.01 1 1 S 2559074 Pseudomonas sp. S150 0.01 1 1 S 2954086 Pseudomonas sp. FP2196 0.01 1 1 S 2762896 Pseudomonas sp. MPDS 0.01 1 1 S 2871095 Pseudomonas sp. DR48 0.14 22 0 G1 136841 Pseudomonas aeruginosa group 0.14 22 22 S 287 Pseudomonas aeruginosa 0.09 15 0 G1 136845 Pseudomonas putida group 0.08 12 11 S 303 Pseudomonas putida 0.01 1 1 S1 1196325 Pseudomonas putida DOT-T1E 0.02 3 3 S 78327 Pseudomonas mosselii 0.03 5 5 S 437900 Pseudomonas marincola 0.03 4 4 S 1198456 Pseudomonas guguanensis 0.02 3 3 S 158627 Pseudomonas graminis 0.01 2 2 S 321846 Pseudomonas simiae 0.01 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.01 1 1 S 2738125 Pseudomonas hefeiensis 0.01 1 0 G1 136843 Pseudomonas fluorescens group 0.01 1 1 S 183795 Pseudomonas mediterranea 0.01 1 1 S 930166 Pseudomonas brassicacearum 0.01 1 1 S 2599595 Pseudomonas eucalypticola 0.01 1 1 S 2316085 Pseudomonas bubulae 0.03 4 0 G 2901164 Stutzerimonas 0.03 4 0 G1 136846 Stutzerimonas stutzeri group 0.03 4 4 S 74829 Stutzerimonas balearica 0.02 3 0 G 1654787 Thiopseudomonas 0.02 3 3 S 1697053 Thiopseudomonas alkaliphila 0.04 7 0 F 2887365 Marinobacteraceae 0.04 7 7 G 2742 Marinobacter 0.53 84 2 O 135622 Alteromonadales 0.25 40 1 F 267890 Shewanellaceae 0.25 39 11 G 22 Shewanella 0.09 14 14 S 62322 Shewanella baltica 0.06 9 9 S 2018305 Shewanella bicestrii 0.02 3 3 S 712036 Shewanella dokdonensis 0.01 2 1 G1 196818 unclassified Shewanella 0.01 1 1 S 2746932 Shewanella sp. MTB7 0.18 28 0 F 72275 Alteromonadaceae 0.18 28 0 F1 2903219 Alteromonas/Salinimonas group 0.18 28 0 G 226 Alteromonas 0.18 28 0 G1 2614992 unclassified Alteromonas 0.18 28 28 S 2267264 Alteromonas sp. RKMC-009 0.08 13 0 F 267888 Pseudoalteromonadaceae 0.08 12 0 G 53246 Pseudoalteromonas 0.08 12 0 G1 194690 unclassified Pseudoalteromonas 0.05 8 8 S 649161 Pseudoalteromonas sp. 3J6 0.03 4 4 S 2785910 Pseudoalteromonas sp. A41-2 0.01 1 0 G 2834759 Flocculibacter 0.01 1 1 S 2744479 Flocculibacter collagenilyticus 0.01 1 0 F 267892 Ferrimonadaceae 0.01 1 0 G 44011 Ferrimonas 0.01 1 1 S 2724191 Ferrimonas lipolytica 0.49 78 0 C1 118884 Gammaproteobacteria incertae sedis 0.46 74 0 G 1076625 Candidatus Steffania 0.46 74 74 S 1076626 Candidatus Steffania adelgidicola 0.03 4 0 G 198346 Candidatus Palibaumannia 0.03 4 3 S 186490 Candidatus Palibaumannia cicadellinicola 0.01 1 1 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.28 45 0 O 135614 Lysobacterales 0.28 44 2 F 32033 Lysobacteraceae 0.21 34 0 G 338 Xanthomonas 0.21 34 34 S 29447 Xanthomonas albilineans 0.02 3 1 G 68 Lysobacter 0.01 2 2 S 84531 Lysobacter antibioticus 0.02 3 0 G 83614 Luteimonas 0.02 3 3 S 2565782 Luteimonas yindakuii 0.01 2 2 G 83618 Pseudoxanthomonas 0.01 1 0 F 1775411 Rhodanobacteraceae 0.01 1 1 G 231454 Dyella 0.25 40 0 O 135613 Chromatiales 0.22 35 1 F 1046 Chromatiaceae 0.11 18 0 G 85072 Allochromatium 0.11 18 18 S 553982 Allochromatium tepidum 0.06 9 0 G 156885 Thioflavicoccus 0.06 9 0 S 80679 Thioflavicoccus mobilis 0.06 9 9 S1 765912 Thioflavicoccus mobilis 8321 0.01 2 2 G 1056 Thiocapsa 0.01 2 2 G 61593 Thiorhodovibrio 0.01 1 0 G 67575 Rheinheimera 0.01 1 0 G1 115860 unclassified Rheinheimera 0.01 1 1 S 1763998 Rheinheimera sp. F8 0.01 1 1 G 2796146 Candidatus Nitrosacidococcus 0.01 1 0 G 2828366 Caldichromatium 0.01 1 1 S 2699430 Caldichromatium japonicum 0.03 5 0 F 72276 Ectothiorhodospiraceae 0.03 4 0 G 1335745 Spiribacter 0.02 3 3 S 2182432 Spiribacter halobius 0.01 1 0 G1 2629425 unclassified Spiribacter 0.01 1 1 S 2666185 Spiribacter sp. 2438 0.01 1 0 G 406099 Aquisalimonas 0.01 1 0 G1 2644645 unclassified Aquisalimonas 0.01 1 1 S 2740807 Aquisalimonas sp. 2447 0.22 35 2 O 135619 Oceanospirillales 0.15 24 0 F 135620 Oceanospirillaceae 0.09 14 0 G 459520 Neptuniibacter 0.09 14 14 S 651666 Neptuniibacter halophilus 0.06 9 0 G 28253 Marinomonas 0.06 9 9 S 2773454 Marinomonas algicola 0.01 1 0 G 515417 Amphritea 0.01 1 1 S 452627 Amphritea japonica 0.05 8 2 F 28256 Halomonadaceae 0.02 3 0 G 2745 Halomonas 0.02 3 3 G1 2609666 unclassified Halomonas 0.02 3 3 G 404432 Salinicola 0.01 1 0 F 224379 Hahellaceae 0.01 1 1 G 158481 Hahella 0.07 11 0 O 72273 Thiotrichales 0.04 7 1 F 135616 Piscirickettsiaceae 0.03 5 0 G 2781121 Thiosulfatimonas 0.03 5 5 S 2675054 Thiosulfatimonas sediminis 0.01 1 0 G 1237 Piscirickettsia 0.01 1 1 S 1238 Piscirickettsia salmonis 0.03 4 0 F 135617 Thiotrichaceae 0.03 4 3 G 1030 Thiothrix 0.01 1 1 S 525917 Thiothrix lacustris 0.07 11 0 O 118969 Legionellales 0.04 6 0 F 444 Legionellaceae 0.04 6 0 G 445 Legionella 0.03 4 0 S 446 Legionella pneumophila 0.03 4 4 S1 91891 Legionella pneumophila subsp. pneumophila 0.01 2 2 S 450 Legionella longbeachae 0.03 5 2 F 118968 Coxiellaceae 0.02 3 0 G 254245 Aquicella 0.02 3 3 S 254247 Aquicella siphonis 0.02 3 0 O 135615 Cardiobacteriales 0.02 3 0 F 868 Cardiobacteriaceae 0.01 2 0 G 13275 Suttonella 0.01 2 0 G1 2908647 unclassified Suttonella 0.01 2 2 S 2908648 Suttonella sp. R2A3 0.01 1 0 G 2717 Cardiobacterium 0.01 1 0 G1 2648856 unclassified Cardiobacterium 0.01 1 1 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.02 3 0 O 1706369 Cellvibrionales 0.01 1 0 F 1706371 Cellvibrionaceae 0.01 1 0 G 10 Cellvibrio 0.01 1 0 G1 2624793 unclassified Cellvibrio 0.01 1 1 S 1987723 Cellvibrio sp. PSBB006 0.01 1 1 F 1706372 Halieaceae 0.01 1 0 F 1706375 Spongiibacteraceae 0.01 1 0 G 1084558 Oceanicoccus 0.01 1 1 S 716816 Oceanicoccus sagamiensis 0.02 3 0 O 3084968 Thiohalomonadales 0.02 3 0 F 3084969 Thiohalomonadaceae 0.02 3 0 G 2034504 Sulfurivermis 0.02 3 3 S 1972068 Sulfurivermis fontis 0.01 2 0 O 135618 Methylococcales 0.01 2 0 F 403 Methylococcaceae 0.01 1 0 G 429 Methylobacter 0.01 1 0 G1 2635283 unclassified Methylobacter 0.01 1 1 S 2839024 Methylobacter sp. S3L5C 0.01 1 0 G 1295378 Methylogaea 0.01 1 1 S 1295382 Methylogaea oryzae 0.01 1 0 O 3060226 Steroidobacterales 0.01 1 0 F 2689614 Steroidobacteraceae 0.01 1 0 G 469322 Steroidobacter 0.01 1 1 S 465721 Steroidobacter denitrificans 1.66 264 56 C 28216 Betaproteobacteria 1.19 189 10 O 80840 Burkholderiales 0.45 71 3 F 80864 Comamonadaceae 0.38 61 59 G 80865 Delftia 0.01 2 2 S 180282 Delftia tsuruhatensis 0.03 4 1 G 283 Comamonas 0.02 3 3 S 2743470 Comamonas antarctica 0.01 1 1 G 28065 Rhodoferax 0.01 1 0 G 34072 Variovorax 0.01 1 0 G1 663243 unclassified Variovorax 0.01 1 1 S 207745 Variovorax sp. WDL1 0.01 1 0 G 232523 Hylemonella 0.01 1 1 S 80880 Hylemonella gracilis 0.32 51 10 F 75682 Oxalobacteraceae 0.12 19 2 G 963 Herbaspirillum 0.11 17 17 S 863372 Herbaspirillum huttiense 0.06 10 3 G 401469 Undibacterium 0.04 7 1 G1 2630295 unclassified Undibacterium 0.04 6 6 S 3048609 Undibacterium sp. CCC3.4 0.05 8 8 G 29580 Janthinobacterium 0.02 3 1 F1 2895353 Telluria group 0.01 2 1 G 149698 Massilia 0.01 1 0 G1 2609279 unclassified Massilia 0.01 1 1 S 3126507 Massilia sp. W12 0.01 1 0 G 1344552 Noviherbaspirillum 0.01 1 0 G1 2617509 unclassified Noviherbaspirillum 0.01 1 1 S 2601898 Noviherbaspirillum sp. UKPF54 0.27 43 0 F 119060 Burkholderiaceae 0.10 16 2 G 32008 Burkholderia 0.05 8 0 G1 111527 pseudomallei group 0.04 6 5 S 28450 Burkholderia pseudomallei 0.01 1 1 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.01 1 1 S 13373 Burkholderia mallei 0.01 1 0 S 57975 Burkholderia thailandensis 0.01 1 1 S1 1249664 Burkholderia thailandensis 34 0.04 6 0 G1 2613784 unclassified Burkholderia 0.04 6 6 S 1494466 Burkholderia sp. FERM BP-3421 0.08 13 1 G 48736 Ralstonia 0.08 12 1 G1 3116862 Ralstonia solanacearum species complex 0.07 11 11 S 305 Ralstonia solanacearum 0.04 6 0 G 2038280 Robbsia 0.04 6 0 G1 2636574 unclassified Robbsia 0.04 6 6 S 3149231 Robbsia sp. KACC 23696 0.03 5 0 G 106589 Cupriavidus 0.03 5 5 S 164546 Cupriavidus taiwanensis 0.01 2 1 G 1822464 Paraburkholderia 0.01 1 1 S 2571748 Paraburkholderia acidisoli 0.01 1 1 G 93217 Pandoraea 0.06 10 0 F 506 Alcaligenaceae 0.02 3 0 G 1472344 Basilea 0.02 3 0 S 1472345 Basilea psittacipulmonis 0.02 3 3 S1 1072685 Basilea psittacipulmonis DSM 24701 0.02 3 0 G 152267 Pigmentiphaga 0.02 3 3 S 1940612 Pigmentiphaga aceris 0.02 3 0 G 290425 Advenella 0.02 3 3 S 1481665 Advenella alkanexedens 0.01 1 0 G 1100891 Paenalcaligenes 0.01 1 1 S 2980099 Paenalcaligenes faecalis 0.01 2 0 O1 224471 Burkholderiales genera incertae sedis 0.01 2 2 G 32012 Thiomonas 0.01 2 0 F 2975441 Sphaerotilaceae 0.01 1 0 G 93681 Roseateles 0.01 1 0 G1 2626991 unclassified Roseateles 0.01 1 1 S 1658665 Mitsuaria sp. 7 0.01 1 0 G 1114981 Piscinibacter 0.01 1 1 S 946333 Piscinibacter gummiphilus 0.06 9 0 C1 119066 Betaproteobacteria incertae sedis 0.04 7 0 G 1301080 Candidatus Nasuia 0.04 7 7 S 1160784 Candidatus Nasuia deltocephalinicola 0.01 2 0 G 1381133 Candidatus Profftella 0.01 1 1 S 669502 Candidatus Profftella armatura 0.01 1 1 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.03 5 0 O 206351 Neisseriales 0.03 5 0 F 481 Neisseriaceae 0.02 3 0 G 2593687 Aquella 0.02 3 3 S 2067065 Aquella oligotrophica 0.01 1 0 G 482 Neisseria 0.01 1 1 S 1853278 Neisseria chenwenguii 0.01 1 1 G 1193515 Snodgrassella 0.02 3 0 O 32003 Nitrosomonadales 0.01 2 2 F 206379 Nitrosomonadaceae 0.01 1 0 F 2803844 Usitatibacteraceae 0.01 1 1 G 2803845 Usitatibacter 0.01 2 0 O 206389 Rhodocyclales 0.01 2 0 F 75787 Rhodocyclaceae 0.01 1 0 G 83766 Propionivibrio 0.01 1 0 G1 334579 environmental samples 0.01 1 1 S 426737 uncultured Propionivibrio sp. 0.01 1 0 G 1911577 Oryzomicrobium 0.01 1 1 S 1735038 Oryzomicrobium terrae 1.61 256 11 C 28211 Alphaproteobacteria 0.79 126 3 O 356 Hyphomicrobiales 0.31 49 0 F 118882 Brucellaceae 0.31 49 46 F1 2826938 Brucella/Ochrobactrum group 0.02 3 2 G 234 Brucella 0.01 1 0 S 29459 Brucella melitensis 0.01 1 0 S1 645169 Brucella melitensis bv. 2 0.01 1 1 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.11 18 0 F 2813035 Parvibaculaceae 0.11 18 0 G 256616 Parvibaculum 0.11 18 0 S 256618 Parvibaculum lavamentivorans 0.11 18 18 S1 402881 Parvibaculum lavamentivorans DS-1 0.11 17 0 F 82115 Rhizobiaceae 0.06 9 1 F1 227290 Rhizobium/Agrobacterium group 0.05 8 6 G 379 Rhizobium 0.01 1 0 G1 2613769 unclassified Rhizobium 0.01 1 1 S 2926709 Rhizobium sp. CC-CFT758 0.01 1 0 S 56730 Rhizobium gallicum 0.01 1 0 S1 142627 Rhizobium gallicum bv. gallicum 0.01 1 1 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.05 8 0 F1 227292 Sinorhizobium/Ensifer group 0.05 8 0 G 28105 Sinorhizobium 0.05 8 2 S 382 Sinorhizobium meliloti 0.04 6 6 S1 1041157 Sinorhizobium meliloti WSM1022 0.08 13 8 F 119045 Methylobacteriaceae 0.03 5 5 G 407 Methylobacterium 0.04 7 1 F 69277 Phyllobacteriaceae 0.04 6 0 G 68287 Mesorhizobium 0.03 5 5 S 2725666 Mesorhizobium terrae 0.01 1 0 G1 325217 unclassified Mesorhizobium 0.01 1 1 S 3074855 Mesorhizobium sp. WR6 0.03 4 1 F 255475 Aurantimonadaceae 0.02 3 3 G 293088 Martelella 0.02 3 2 F 2831106 Devosiaceae 0.01 1 0 G 46913 Devosia 0.01 1 1 G1 196773 unclassified Devosia 0.02 3 1 F 45401 Hyphomicrobiaceae 0.01 2 0 G 1484898 Methyloceanibacter 0.01 2 0 G1 2617503 unclassified Methyloceanibacter 0.01 2 2 S 2170729 Methyloceanibacter sp. wino2 0.02 3 0 F 2821832 Stappiaceae 0.01 2 0 G 1406135 Breoghania 0.01 2 0 G1 2624130 unclassified Breoghania 0.01 1 1 S 2065378 Breoghania sp. 0.01 1 1 S 2304600 Breoghania sp. L-A4 0.01 1 0 G 150830 Roseibium 0.01 1 0 G1 1936170 environmental samples 0.01 1 1 S 1936171 uncultured Roseibium sp. 0.01 2 2 F 41294 Nitrobacteraceae 0.01 1 0 F 335928 Xanthobacteraceae 0.01 1 0 G 556257 Pseudolabrys 0.01 1 0 G1 2638514 unclassified Pseudolabrys 0.01 1 1 S 2562284 Pseudolabrys sp. FHR47 0.01 1 0 F 2829814 Ahrensiaceae 0.01 1 0 G 1915401 Roseitalea 0.01 1 1 S 1852022 Roseitalea porphyridii 0.01 1 0 F 2036754 Chelatococcaceae 0.01 1 1 G 28209 Chelatococcus 0.01 1 0 F 45404 Beijerinckiaceae 0.01 1 0 G 184923 Methylocapsa 0.01 1 0 G1 2639413 unclassified Methylocapsa 0.01 1 1 S 3041435 Methylocapsa sp. D3K7 0.30 48 2 O 204457 Sphingomonadales 0.20 32 3 F 41297 Sphingomonadaceae 0.13 20 2 G 165696 Novosphingobium 0.08 13 13 S 13688 Novosphingobium capsulatum 0.03 4 4 S 2728851 Novosphingobium olei 0.01 1 0 G1 2644732 unclassified Novosphingobium 0.01 1 1 S 3079861 Novosphingobium sp. ZN18A2 0.05 8 4 G 13687 Sphingomonas 0.01 1 1 S 1813879 Sphingomonas panacisoli 0.01 1 0 G1 196159 unclassified Sphingomonas 0.01 1 1 S 3062169 Sphingomonas sp. C3-2 0.01 1 1 S 2698679 Sphingomonas changnyeongensis 0.01 1 1 S 2698828 Sphingomonas lacunae 0.01 1 0 G 1763827 Hankyongella 0.01 1 1 S 1763828 Hankyongella ginsenosidimutans 0.07 11 4 F 335929 Erythrobacteraceae 0.04 6 6 G 2800681 Aurantiacibacter 0.01 1 0 G 2827482 Caenibius 0.01 1 0 G1 2827483 unclassified Caenibius 0.01 1 1 S 2872646 Caenibius sp. WL 0.01 2 0 F 2844881 Zymomonadaceae 0.01 2 0 G 541 Zymomonas 0.01 2 2 S 542 Zymomonas mobilis 0.01 1 0 F 2820280 Sphingosinicellaceae 0.01 1 0 G 2883109 Sandaracinobacteroides 0.01 1 1 S 2759707 Sandaracinobacteroides saxicola 0.18 29 0 O 204441 Rhodospirillales 0.13 20 0 F 2844601 Stellaceae 0.13 20 0 G 93 Stella 0.13 20 20 S 94 Stella humosa 0.02 3 1 F 433 Acetobacteraceae 0.01 1 0 G 512381 Acidisoma 0.01 1 0 G1 2634065 unclassified Acidisoma 0.01 1 1 S 3040935 Acidisoma sp. PAMC 29798 0.01 1 0 G 1079922 Commensalibacter 0.01 1 1 S 2070537 Commensalibacter melissae 0.02 3 0 F 2690195 Elioraeaceae 0.02 3 0 G 457933 Elioraea 0.02 3 3 S 2843330 Elioraea tepida 0.01 2 0 F 41295 Rhodospirillaceae 0.01 2 0 G 1263978 Candidatus Endolissoclinum 0.01 2 2 S 1263979 Candidatus Endolissoclinum faulkneri 0.01 1 0 F 2844864 Thalassobaculaceae 0.01 1 0 G 390876 Nisaea 0.01 1 1 S 1862145 Nisaea acidiphila 0.10 16 0 O 204458 Caulobacterales 0.10 16 2 F 76892 Caulobacteraceae 0.07 11 10 G 41275 Brevundimonas 0.01 1 0 G1 2622653 unclassified Brevundimonas 0.01 1 1 S 2591463 Brevundimonas sp. M20 0.01 2 0 G 20 Phenylobacterium 0.01 1 1 S 2201350 Phenylobacterium parvum 0.01 1 0 G1 2640670 unclassified Phenylobacterium 0.01 1 1 S 2903901 Phenylobacterium sp. LH3H17 0.01 1 0 G 75 Caulobacter 0.01 1 0 G1 2648921 unclassified Caulobacter 0.01 1 1 S 3016000 Caulobacter sp. NIBR1757 0.08 12 0 O 2800060 Hyphomonadales 0.08 12 0 F 69657 Hyphomonadaceae 0.08 12 12 G 85 Hyphomonas 0.04 7 1 O 204455 Rhodobacterales 0.03 5 1 F 31989 Paracoccaceae 0.01 2 2 G 265 Paracoccus 0.01 1 0 G 285107 Thioclava 0.01 1 1 S 1549850 Thioclava electrotropha 0.01 1 0 G 2683599 Paroceanicella 0.01 1 1 S 2579971 Paroceanicella profunda 0.01 1 0 F 2854170 Roseobacteraceae 0.01 1 0 G 2919626 Alloyangia 0.01 1 1 S 311180 Alloyangia pacifica 0.02 3 0 O 1921002 Holosporales 0.02 3 0 F 44746 Holosporaceae 0.01 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.01 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.01 1 0 G 2900571 Candidatus Gromoviella 0.01 1 1 S 2806609 Candidatus Gromoviella agglomerans 0.01 2 0 O 2066490 Emcibacterales 0.01 2 0 F 2066491 Emcibacteraceae 0.01 2 0 G 2943291 Pseudemcibacter 0.01 2 2 S 2857064 Pseudemcibacter aquimaris 0.01 1 0 O 766 Rickettsiales 0.01 1 0 F 1328881 Candidatus Midichloriaceae 0.01 1 0 G 2716172 Candidatus Bandiella 0.01 1 1 S 1664265 Candidatus Bandiella woodruffii 0.01 1 0 O 54526 Candidatus Pelagibacterales 0.01 1 0 F 1655514 Candidatus Pelagibacteraceae 0.01 1 0 G 198251 Candidatus Pelagibacter 0.01 1 0 G1 2647897 unclassified Candidatus Pelagibacter 0.01 1 1 S 1388755 Candidatus Pelagibacter sp. HIMB1321 0.02 3 0 C 1807140 Acidithiobacillia 0.02 3 0 O 225057 Acidithiobacillales 0.02 3 0 F 225058 Acidithiobacillaceae 0.02 3 2 G 119977 Acidithiobacillus 0.01 1 0 G1 2614800 unclassified Acidithiobacillus 0.01 1 1 S 2994951 Acidithiobacillus sp. AMEEHan 11.93 1898 10 D1 1783272 Terrabacteria group 10.62 1690 8 P 1239 Bacillota 10.27 1635 2 C 91061 Bacilli 9.13 1453 2 O 186826 Lactobacillales 8.65 1376 0 F 81852 Enterococcaceae 8.64 1375 0 G 1350 Enterococcus 8.62 1372 1372 S 1351 Enterococcus faecalis 0.01 2 1 S 1354 Enterococcus hirae 0.01 1 1 S1 768486 Enterococcus hirae ATCC 9790 0.01 1 0 S 37734 Enterococcus casseliflavus 0.01 1 1 S1 565655 Enterococcus casseliflavus EC20 0.01 1 1 G 51668 Tetragenococcus 0.27 43 1 F 33958 Lactobacillaceae 0.13 21 13 G 46255 Weissella 0.02 3 3 S 1249 Weissella paramesenteroides 0.01 2 2 S 1583 Weissella confusa 0.01 2 2 S 137591 Weissella cibaria 0.01 1 1 S 155866 Weissella soli 0.05 8 4 G 1578 Lactobacillus 0.01 1 1 S 1584 Lactobacillus delbrueckii 0.01 1 1 S 1579 Lactobacillus acidophilus 0.01 1 1 S 33959 Lactobacillus johnsonii 0.01 1 1 S 83683 Lactobacillus amylolyticus 0.03 4 4 G 1243 Leuconostoc 0.02 3 1 G 2742598 Limosilactobacillus 0.01 2 2 S 1613 Limosilactobacillus fermentum 0.02 3 0 G 2759736 Lacticaseibacillus 0.01 2 1 S 1597 Lacticaseibacillus paracasei 0.01 1 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.01 1 1 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.01 1 1 S 3025672 Lacticaseibacillus pabuli 0.01 1 0 G 2767886 Levilactobacillus 0.01 1 1 S 1580 Levilactobacillus brevis 0.01 1 0 G 2767887 Ligilactobacillus 0.01 1 1 S 1624 Ligilactobacillus salivarius 0.01 1 0 G 2767877 Apilactobacillus 0.01 1 1 S 2923364 Apilactobacillus apisilvae 0.17 27 0 F 1300 Streptococcaceae 0.17 27 10 G 1301 Streptococcus 0.06 10 10 S 1308 Streptococcus thermophilus 0.01 1 1 S 1314 Streptococcus pyogenes 0.01 1 1 S 1348 Streptococcus parauberis 0.01 1 1 S 1345 Streptococcus ferus 0.01 1 1 S 1341 Streptococcus ratti 0.01 1 1 S 68892 Streptococcus infantis 0.01 1 1 S 1311 Streptococcus agalactiae 0.01 1 0 G1 119603 Streptococcus dysgalactiae group 0.01 1 0 S 1334 Streptococcus dysgalactiae 0.01 1 0 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.01 1 1 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.03 5 0 F 186828 Carnobacteriaceae 0.01 2 2 G 29393 Dolosigranulum 0.01 2 0 G 117563 Granulicatella 0.01 2 2 S 46124 Granulicatella adiacens 0.01 1 0 G 82800 Desemzia 0.01 1 1 S 82801 Desemzia incerta 1.13 180 8 O 1385 Bacillales 0.54 86 6 F 186817 Bacillaceae 0.23 36 4 G 1386 Bacillus 0.09 15 1 G1 653685 Bacillus subtilis group 0.06 9 0 G2 1938374 Bacillus amyloliquefaciens group 0.06 9 8 S 492670 Bacillus velezensis 0.01 1 1 S1 1385727 Bacillus velezensis NAU-B3 0.03 4 4 S 1423 Bacillus subtilis 0.01 1 1 S 1452 Bacillus atrophaeus 0.06 10 2 G1 86661 Bacillus cereus group 0.03 5 4 S 1428 Bacillus thuringiensis 0.01 1 1 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 2 0 G2 2750818 unclassified Bacillus cereus group 0.01 2 2 S 1892404 Bacillus sp. ABP14 0.01 1 1 S 1396 Bacillus cereus 0.04 7 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.04 7 7 S 2841656 Bacillus sp. ZHX3 0.08 13 13 G 1055323 Aeribacillus 0.08 12 8 G 2837504 Heyndrickxia 0.03 4 4 S 1398 Heyndrickxia coagulans 0.03 5 0 G 2893056 Halalkalibacter 0.03 5 5 S 199441 Halalkalibacter krulwichiae 0.01 2 0 G 84406 Virgibacillus 0.01 2 2 S 447199 Virgibacillus salarius 0.01 2 0 G 2005375 Alkalicoccus 0.01 2 2 S 1667239 Alkalicoccus halolimnae 0.01 2 0 G 175304 Lentibacillus 0.01 2 2 S 1472767 Lentibacillus amyloliquefaciens 0.01 2 0 G 2800373 Priestia 0.01 2 2 S 1404 Priestia megaterium 0.01 2 0 G 351195 Salimicrobium 0.01 2 0 G1 2619739 unclassified Salimicrobium 0.01 2 2 S 3095364 Salimicrobium sp. PL1-032A 0.01 1 1 G 2893057 Shouchella 0.01 1 0 G 2837508 Rossellomorea 0.01 1 1 S 218284 Rossellomorea vietnamensis 0.01 1 1 G 400634 Lysinibacillus 0.01 1 0 G 2675232 Neobacillus 0.01 1 1 G1 2675272 unclassified Neobacillus 0.45 72 0 F 90964 Staphylococcaceae 0.45 72 1 G 1279 Staphylococcus 0.42 67 67 S 1280 Staphylococcus aureus 0.01 2 2 S 1286 Staphylococcus simulans 0.01 1 1 S 1290 Staphylococcus hominis 0.01 1 1 S 29388 Staphylococcus capitis 0.06 9 0 F 186822 Paenibacillaceae 0.04 7 1 G 44249 Paenibacillus 0.01 2 0 G1 185978 unclassified Paenibacillus 0.01 2 2 S 2921652 Paenibacillus sp. FSL R5-0636 0.01 2 2 S 44251 Paenibacillus durus 0.01 1 1 S 1406 Paenibacillus polymyxa 0.01 1 1 S 1462996 Paenibacillus yonginensis 0.01 2 2 G 55080 Brevibacillus 0.01 2 0 F 539738 Gemellaceae 0.01 2 2 G 1378 Gemella 0.01 1 0 F 186818 Planococcaceae 0.01 1 1 G 160795 Ureibacillus 0.01 1 0 F 186820 Listeriaceae 0.01 1 1 G 1637 Listeria 0.01 1 0 F 186823 Alicyclobacillaceae 0.01 1 0 G 29330 Alicyclobacillus 0.01 1 1 S 2931921 Alicyclobacillus mengziensis 0.23 36 1 C 186801 Clostridia 0.10 16 1 O 3085636 Lachnospirales 0.09 14 0 F 186803 Lachnospiraceae 0.04 6 0 G 1843210 Anaerocolumna 0.04 6 6 S 433286 Anaerocolumna cellulosilytica 0.02 3 0 G 2569097 Anaerobutyricum 0.02 3 3 S 39488 Anaerobutyricum hallii 0.01 1 0 G 841 Roseburia 0.01 1 1 S 301301 Roseburia hominis 0.01 1 0 G 2163168 Kineothrix 0.01 1 0 G1 2625420 unclassified Kineothrix 0.01 1 1 S 3070215 Kineothrix sp. MB12-C1 0.01 1 0 G 572511 Blautia 0.01 1 0 S 53443 Blautia hydrogenotrophica 0.01 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.01 1 0 G 33042 Coprococcus 0.01 1 1 S 116085 Coprococcus catus 0.01 1 0 G 28050 Lachnospira 0.01 1 1 S 39485 Lachnospira eligens 0.01 1 0 F 2603322 Vallitaleaceae 0.01 1 0 G 2603323 Petrocella 0.01 1 1 S 2173034 Petrocella atlantisensis 0.09 14 0 O 186802 Eubacteriales 0.04 6 0 F 216572 Oscillospiraceae 0.03 4 0 G 1263 Ruminococcus 0.02 3 3 S 2564099 Ruminococcus bovis 0.01 1 1 S 1161942 Ruminococcus champanellensis 0.01 1 0 G 2892396 Vescimonas 0.01 1 1 S 2714353 Vescimonas fastidiosa 0.01 1 1 G 292632 Subdoligranulum 0.02 3 0 F 2937909 Desulfitobacteriaceae 0.02 3 3 G 56112 Dehalobacter 0.01 2 0 F 186806 Eubacteriaceae 0.01 2 2 G 33951 Acetobacterium 0.01 2 0 F 31979 Clostridiaceae 0.01 2 0 G 1485 Clostridium 0.01 1 1 S 1716543 Clostridium thermarum 0.01 1 1 S 1520 Clostridium beijerinckii 0.01 1 0 O1 538999 Eubacteriales incertae sedis 0.01 1 0 G 1392389 Intestinimonas 0.01 1 1 S 1297617 Intestinimonas butyriciproducens 0.02 3 0 O 53433 Halanaerobiales 0.01 2 0 O1 387655 Halanaerobiales incertae sedis 0.01 2 0 G 1769008 Anoxybacter 0.01 2 2 S 1323375 Anoxybacter fermentans 0.01 1 0 F 53434 Halobacteroidaceae 0.01 1 0 G 42417 Halobacteroides 0.01 1 0 S 42422 Halobacteroides halobius 0.01 1 1 S1 748449 Halobacteroides halobius DSM 5150 0.01 1 0 O 68295 Thermoanaerobacterales 0.01 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.01 1 0 G 252965 Mahella 0.01 1 0 S 252966 Mahella australiensis 0.01 1 1 S1 697281 Mahella australiensis 50-1 BON 0.01 1 0 O 3082720 Peptostreptococcales 0.01 1 0 F 186804 Peptostreptococcaceae 0.01 1 0 G 1870884 Clostridioides 0.01 1 1 S 1496 Clostridioides difficile 0.06 9 0 C 1737404 Tissierellia 0.05 8 0 O 1737405 Tissierellales 0.04 7 0 F 1570339 Peptoniphilaceae 0.03 4 0 G 165779 Anaerococcus 0.01 2 0 G1 2614126 unclassified Anaerococcus 0.01 2 2 S 3036300 Anaerococcus sp. Marseille-Q7828 0.01 1 0 S 33034 Anaerococcus prevotii 0.01 1 1 S1 525919 Anaerococcus prevotii DSM 20548 0.01 1 1 S 1870984 Anaerococcus mediterraneensis 0.02 3 0 G 150022 Finegoldia 0.02 3 3 S 1260 Finegoldia magna 0.01 1 0 F 2992717 Acidilutibacteraceae 0.01 1 0 G 2992720 Acidilutibacter 0.01 1 1 S 2507161 Acidilutibacter cellobiosedens 0.01 1 0 C1 1737407 Tissierellia incertae sedis 0.01 1 0 G 1582879 Ezakiella 0.01 1 1 S 46507 Ezakiella coagulans 0.01 2 0 C 909932 Negativicutes 0.01 1 0 O 909929 Selenomonadales 0.01 1 0 F 1843490 Sporomusaceae 0.01 1 0 G 81463 Anaeromusa 0.01 1 0 G1 673272 environmental samples 0.01 1 1 S 673273 uncultured Anaeromusa sp. 0.01 1 0 O 1843489 Veillonellales 0.01 1 0 F 31977 Veillonellaceae 0.01 1 1 G 29465 Veillonella 1.09 174 0 P 201174 Actinomycetota 1.08 172 14 C 1760 Actinomycetes 0.28 45 9 O 85006 Micrococcales 0.08 13 1 F 1268 Micrococcaceae 0.03 5 1 G 32207 Rothia 0.02 3 3 S 2047 Rothia dentocariosa 0.01 1 1 S 43675 Rothia mucilaginosa 0.03 5 1 G 57493 Kocuria 0.03 4 4 S 71999 Kocuria palustris 0.01 2 0 G 1663 Arthrobacter 0.01 2 0 G1 235627 unclassified Arthrobacter 0.01 1 1 S 2991715 Arthrobacter sp. ATA002 0.01 1 1 S 2828862 Arthrobacter sp. Helios 0.06 10 0 F 145357 Dermacoccaceae 0.06 10 5 G 57495 Dermacoccus 0.03 5 0 G1 2643059 unclassified Dermacoccus 0.03 5 5 S 2762331 Dermacoccus sp. PAMC28757 0.03 5 0 F 85023 Microbacteriaceae 0.01 2 1 G 33882 Microbacterium 0.01 1 1 G1 2609290 unclassified Microbacterium 0.01 1 1 G 33877 Agromyces 0.01 1 1 G 55968 Leucobacter 0.01 1 0 F1 1655488 Luna cluster 0.01 1 0 F2 1655489 Luna-1 subcluster 0.01 1 0 G 529883 Rhodoluna 0.01 1 1 S 529884 Rhodoluna lacicola 0.02 3 0 F 85020 Dermabacteraceae 0.02 3 2 G 43668 Brachybacterium 0.01 1 1 S 1652028 Brachybacterium huguangmaarense 0.01 2 0 F 85018 Dermatophilaceae 0.01 2 0 G 1862 Dermatophilus 0.01 2 2 S 1863 Dermatophilus congolensis 0.01 1 0 F 85019 Brevibacteriaceae 0.01 1 1 G 1696 Brevibacterium 0.01 1 0 F 85021 Intrasporangiaceae 0.01 1 0 G 53355 Terrabacter 0.01 1 0 G1 2630222 unclassified Terrabacter 0.01 1 1 S 3108389 Terrabacter sp. C0L_2 0.01 1 0 F 1331736 Ruaniaceae 0.01 1 0 G 2828348 Occultella 0.01 1 1 S 2675754 Occultella kanbiaonis 0.28 45 0 O 85011 Kitasatosporales 0.28 45 7 F 2062 Streptomycetaceae 0.24 38 4 G 1883 Streptomyces 0.16 25 10 G1 2593676 unclassified Streptomyces 0.02 3 3 S 2750025 Streptomyces sp. CB00271 0.02 3 3 S 2933779 Streptomyces sp. WAC00303 0.01 2 2 S 2594460 Streptomyces sp. S1A1-8 0.01 1 1 S 2903645 Streptomyces sp. NBC_00310 0.01 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.01 1 1 S 2903660 Streptomyces sp. NBC_00525 0.01 1 1 S 2748873 Streptomyces sp. CB04723 0.01 1 1 S 2898276 Streptomyces sp. MRC013 0.01 1 1 S 2975938 Streptomyces sp. NBC_01768 0.01 1 1 S 2730915 Streptomyces sp. Z423-1 0.03 4 0 G1 629295 Streptomyces griseus group 0.03 4 0 G2 1482561 Streptomyces anulatus subgroup 0.03 4 4 S 1892 Streptomyces anulatus 0.03 4 0 G1 2867164 Streptomyces rochei group 0.03 4 4 S 67376 Streptomyces vinaceusdrappus 0.01 1 0 G1 2839105 Streptomyces violaceusniger group 0.01 1 1 S 1226757 Streptomyces rapamycinicus 0.26 41 0 O 85007 Mycobacteriales 0.18 28 0 F 1653 Corynebacteriaceae 0.18 28 13 G 1716 Corynebacterium 0.03 5 0 S 1717 Corynebacterium diphtheriae 0.03 5 5 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.03 4 0 S 38288 Corynebacterium genitalium 0.03 4 4 S1 585529 Corynebacterium genitalium ATCC 33030 0.01 2 2 S 161895 Corynebacterium phocae 0.01 2 2 S 2768834 Corynebacterium zhongnanshanii 0.01 1 0 S 441501 Corynebacterium massiliense 0.01 1 1 S1 1121364 Corynebacterium massiliense DSM 45435 0.01 1 1 S 108486 Corynebacterium falsenii 0.05 8 1 F 1762 Mycobacteriaceae 0.04 6 0 G 1763 Mycobacterium 0.03 5 0 G1 77643 Mycobacterium tuberculosis complex 0.03 5 5 S 1773 Mycobacterium tuberculosis 0.01 1 0 G1 2642494 unclassified Mycobacterium 0.01 1 1 S 2675523 Mycobacterium sp. DL440 0.01 1 0 G 1866885 Mycolicibacterium 0.01 1 1 S 39687 Mycolicibacterium austroafricanum 0.03 5 0 F 85025 Nocardiaceae 0.03 5 0 G 1827 Rhodococcus 0.03 5 5 S 37919 Rhodococcus opacus 0.12 19 1 O 85009 Propionibacteriales 0.11 17 0 F 31957 Propionibacteriaceae 0.06 9 2 G 1912216 Cutibacterium 0.04 7 7 S 1747 Cutibacterium acnes 0.03 5 5 G 72763 Tessaracoccus 0.01 2 1 G 29404 Microlunatus 0.01 1 1 S 546874 Microlunatus sagamiharensis 0.01 1 1 G 1085622 Propioniciclava 0.01 1 0 F 85015 Nocardioidaceae 0.01 1 1 G 1839 Nocardioides 0.01 2 0 O 1643682 Geodermatophilales 0.01 2 1 F 85030 Geodermatophilaceae 0.01 1 0 G 38501 Blastococcus 0.01 1 0 G1 2619396 unclassified Blastococcus 0.01 1 1 S 3144843 Blastococcus sp. HT6-30 0.01 2 0 O 85010 Pseudonocardiales 0.01 2 0 F 2070 Pseudonocardiaceae 0.01 2 0 G 1847 Pseudonocardia 0.01 2 0 S 240495 Pseudonocardia dioxanivorans 0.01 2 2 S1 675635 Pseudonocardia dioxanivorans CB1190 0.01 2 0 O 2037 Actinomycetales 0.01 2 2 F 2049 Actinomycetaceae 0.01 1 0 O 85014 Glycomycetales 0.01 1 0 F 85034 Glycomycetaceae 0.01 1 0 G 283810 Stackebrandtia 0.01 1 0 S 283811 Stackebrandtia nassauensis 0.01 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.01 1 0 O 2805415 Jatrophihabitantales 0.01 1 0 F 2805416 Jatrophihabitantaceae 0.01 1 1 G 1434010 Jatrophihabitans 0.01 2 0 C 84992 Acidimicrobiia 0.01 2 0 O 84993 Acidimicrobiales 0.01 2 0 F 633392 Iamiaceae 0.01 2 0 G 467975 Iamia 0.01 2 2 S 467976 Iamia majanohamensis 0.06 10 0 P 200795 Chloroflexota 0.04 6 0 C 32061 Chloroflexia 0.04 6 0 O 32064 Chloroflexales 0.04 6 0 O1 1508594 Chloroflexineae 0.04 6 0 F 1106 Chloroflexaceae 0.04 6 0 G 1107 Chloroflexus 0.04 6 0 S 152260 Chloroflexus aggregans 0.04 6 6 S1 326427 Chloroflexus aggregans DSM 9485 0.02 3 0 C 292625 Anaerolineae 0.02 3 0 O 292629 Anaerolineales 0.02 3 0 F 292628 Anaerolineaceae 0.02 3 0 G 1649478 Pelolinea 0.02 3 3 S 913107 Pelolinea submarina 0.01 1 0 C 2364196 Candidatus Thermofonsia 0.01 1 0 O 2364208 Phototrophicales 0.01 1 0 F 2922432 Phototrophicaceae 0.01 1 0 G 2922426 Phototrophicus 0.01 1 1 S 2710758 Phototrophicus methaneseepsis 0.04 6 5 P 544448 Mycoplasmatota 0.01 1 0 C 31969 Mollicutes 0.01 1 0 O 2085 Mycoplasmatales 0.01 1 0 F 2092 Mycoplasmataceae 0.01 1 1 G 2093 Mycoplasma 0.03 5 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.03 5 0 P 1117 Cyanobacteriota 0.03 5 0 C 3028117 Cyanophyceae 0.02 3 0 C1 1301283 Oscillatoriophycideae 0.02 3 0 O 1150 Oscillatoriales 0.02 3 0 F 2934961 Sirenicapillariaceae 0.02 3 0 G 2596745 Limnospira 0.02 3 1 S 147322 Limnospira indica 0.01 2 2 S1 2760438 Limnospira indica BM01 0.01 1 0 O 1161 Nostocales 0.01 1 0 F 1892259 Aphanizomenonaceae 0.01 1 0 G 752201 Sphaerospermopsis 0.01 1 0 S 984207 Sphaerospermopsis torques-reginae 0.01 1 1 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.01 1 0 O 3079749 Leptolyngbyales 0.01 1 0 F 1890438 Leptolyngbyaceae 0.01 1 0 F1 3081713 Leptolyngbya group 0.01 1 0 G 47251 Leptolyngbya 0.01 1 0 G1 2650499 unclassified Leptolyngbya 0.01 1 1 S 2812896 Leptolyngbya sp. 7M 0.01 2 0 P 67819 Armatimonadota 0.01 1 0 C 1077257 Chthonomonadia 0.01 1 0 O 1077263 Chthonomonadales 0.01 1 0 F 1077264 Chthonomonadaceae 0.01 1 0 G 1077265 Chthonomonas 0.01 1 0 S 454171 Chthonomonas calidirosea 0.01 1 1 S1 1303518 Chthonomonas calidirosea T49 0.01 1 0 C 1663419 Fimbriimonadia 0.01 1 0 O 1663425 Fimbriimonadales 0.01 1 0 F 1663426 Fimbriimonadaceae 0.01 1 0 G 1005038 Fimbriimonas 0.01 1 0 S 1005039 Fimbriimonas ginsengisoli 0.01 1 1 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.01 1 0 P 1297 Deinococcota 0.01 1 0 C 188787 Deinococci 0.01 1 0 O 118964 Deinococcales 0.01 1 0 F 183710 Deinococcaceae 0.01 1 1 G 1298 Deinococcus 4.51 718 0 D1 1783270 FCB group 4.49 715 0 D2 68336 Bacteroidota/Chlorobiota group 4.47 711 0 P 976 Bacteroidota 4.25 676 0 C 768503 Cytophagia 4.25 676 0 O 768507 Cytophagales 4.23 673 0 F 89373 Cytophagaceae 4.23 673 0 G 107 Spirosoma 4.16 662 662 S 2666025 Spirosoma endbachense 0.06 9 9 S 564064 Spirosoma rigui 0.01 2 2 S 2735870 Spirosoma taeanense 0.02 3 0 F 2762286 Fulvivirgaceae 0.02 3 0 G 1433993 Chryseolinea 0.02 3 3 S 2321403 Chryseolinea soli 0.13 21 0 C 117743 Flavobacteriia 0.13 21 0 O 200644 Flavobacteriales 0.11 17 1 F 49546 Flavobacteriaceae 0.06 9 0 G 762641 Muriicola 0.06 9 9 S 2507538 Muriicola soli 0.03 4 2 G 237 Flavobacterium 0.01 2 1 G1 196869 unclassified Flavobacterium 0.01 1 1 S 2732161 Flavobacterium sp. IMCC34852 0.01 2 0 G 286104 Winogradskyella 0.01 2 2 S 2686077 Winogradskyella forsetii 0.01 1 0 G 326319 Dokdonia 0.01 1 0 G1 2615033 unclassified Dokdonia 0.01 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.02 3 0 F 2762318 Weeksellaceae 0.01 1 0 G 34084 Riemerella 0.01 1 1 S 34085 Riemerella anatipestifer 0.01 1 1 G 501783 Cloacibacterium 0.01 1 0 F1 2782232 Chryseobacterium group 0.01 1 0 G 59732 Chryseobacterium 0.01 1 1 S 3042315 Chryseobacterium gotjawalense 0.01 1 0 O1 313602 Flavobacteriales incertae sedis 0.01 1 0 G 336809 Candidatus Karelsulcia 0.01 1 1 S 336810 Candidatus Karelsulcia muelleri 0.04 7 0 C 117747 Sphingobacteriia 0.04 7 0 O 200666 Sphingobacteriales 0.04 7 0 F 84566 Sphingobacteriaceae 0.03 5 2 G 28453 Sphingobacterium 0.01 2 2 S 258 Sphingobacterium spiritivorum 0.01 1 1 S 561061 Sphingobacterium psychroaquaticum 0.01 2 0 G 423349 Mucilaginibacter 0.01 2 2 S 551996 Mucilaginibacter gossypii 0.04 6 0 C 200643 Bacteroidia 0.04 6 0 O 171549 Bacteroidales 0.01 2 0 F 171551 Porphyromonadaceae 0.01 2 0 G 1159323 Macellibacteroides 0.01 2 0 G1 1243006 environmental samples 0.01 2 2 S 1243007 uncultured Macellibacteroides sp. 0.01 2 1 F 171552 Prevotellaceae 0.01 1 1 G 2974251 Segatella 0.01 1 0 F 171550 Rikenellaceae 0.01 1 0 G 1647173 Acetobacteroides 0.01 1 0 G1 1760810 environmental samples 0.01 1 1 S 1760811 uncultured Acetobacteroides sp. 0.01 1 0 F 2005525 Tannerellaceae 0.01 1 0 G 375288 Parabacteroides 0.01 1 1 S 1217282 Parabacteroides faecis 0.01 1 0 C 1853228 Chitinophagia 0.01 1 0 O 1853229 Chitinophagales 0.01 1 0 F 563835 Chitinophagaceae 0.01 1 0 G 79328 Chitinophaga 0.01 1 0 G1 2619133 unclassified Chitinophaga 0.01 1 1 S 3137178 Chitinophaga sp. MM2321 0.03 4 0 P 1853220 Rhodothermota 0.03 4 0 C 1853222 Rhodothermia 0.03 4 0 O 1853224 Rhodothermales 0.03 4 0 F 563843 Rhodothermaceae 0.03 4 0 G 2893090 Rhodocaloribacter 0.03 4 4 S 2558931 Rhodocaloribacter litoris 0.02 3 0 P 456828 Candidatus Cloacimonadota 0.02 3 0 C 3039863 Candidatus Cloacimonadia 0.02 3 0 O 3039864 Candidatus Cloacimonadales 0.02 3 0 F 3039865 Candidatus Cloacimonadaceae 0.02 3 0 G 456826 Candidatus Cloacimonas 0.02 3 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.02 3 3 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.27 43 0 P 508458 Synergistota 0.27 43 0 C 649775 Synergistia 0.27 43 0 O 649776 Synergistales 0.27 43 0 F 649777 Synergistaceae 0.27 43 0 G 81411 Aminomonas 0.27 43 0 S 81412 Aminomonas paucivorans 0.27 43 43 S1 584708 Aminomonas paucivorans DSM 12260 0.25 39 0 D1 1783257 PVC group 0.14 23 0 P 203682 Planctomycetota 0.14 23 2 C 203683 Planctomycetia 0.11 17 1 O 2691354 Pirellulales 0.08 13 0 F 2691359 Lacipirellulaceae 0.08 12 0 G 1400386 Bythopirellula 0.08 12 12 S 1400387 Bythopirellula goksoeyrii 0.01 1 0 G 2795782 Botrimarina 0.01 1 1 S 2528022 Botrimarina mediterranea 0.02 3 1 F 2691357 Pirellulaceae 0.01 1 0 G 123 Pirellula 0.01 1 0 S 125 Pirellula staleyi 0.01 1 1 S1 530564 Pirellula staleyi DSM 6068 0.01 1 1 G 2714594 Bremerella 0.03 4 0 O 112 Planctomycetales 0.03 4 1 F 126 Planctomycetaceae 0.01 1 1 G 1649453 Gimesia 0.01 1 0 G 2795777 Maioricimonas 0.01 1 1 S 2528026 Maioricimonas rarisocia 0.01 1 0 G 2795780 Symmachiella 0.01 1 1 S 2527995 Symmachiella dynata 0.06 9 0 P 204428 Chlamydiota 0.06 9 0 C 204429 Chlamydiia 0.06 9 7 O 1963360 Parachlamydiales 0.01 2 0 F 92712 Simkaniaceae 0.01 2 0 G 34093 Simkania 0.01 2 0 S 83561 Simkania negevensis 0.01 2 2 S1 331113 Simkania negevensis Z 0.04 6 0 P 74201 Verrucomicrobiota 0.03 4 0 C 414999 Opitutia 0.02 3 0 O 415001 Puniceicoccales 0.01 2 0 F 3056371 Coraliomargaritaceae 0.01 2 1 G 442430 Coraliomargarita 0.01 1 0 S 395922 Coraliomargarita akajimensis 0.01 1 1 S1 583355 Coraliomargarita akajimensis DSM 45221 0.01 1 0 O1 3056381 Puniceicoccales incertae sedis 0.01 1 0 G 3049269 Candidatus Pelagisphaera 0.01 1 1 S 2684113 Candidatus Pelagisphaera phototrophica 0.01 1 0 O 415000 Opitutales 0.01 1 1 F 134623 Opitutaceae 0.01 1 0 C 134549 Spartobacteria 0.01 1 0 G 134550 Candidatus Xiphinematobacter 0.01 1 0 G1 2648876 unclassified Candidatus Xiphinematobacter 0.01 1 1 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape 0.01 1 0 C 203494 Verrucomicrobiia 0.01 1 0 O 48461 Verrucomicrobiales 0.01 1 0 F 203557 Verrucomicrobiaceae 0.01 1 0 G 2735 Verrucomicrobium 0.01 1 0 G1 2625155 unclassified Verrucomicrobium 0.01 1 1 S 1882831 Verrucomicrobium sp. GAS474 0.01 1 0 P 134625 Kiritimatiellota 0.01 1 0 C 2907184 Tichowtungiia 0.01 1 0 O 2907185 Tichowtungiales 0.01 1 0 F 2907186 Tichowtungiaceae 0.01 1 0 G 2907187 Tichowtungia 0.01 1 1 S 2697043 Tichowtungia aerotolerans 0.11 18 3 P 200940 Thermodesulfobacteriota 0.06 9 0 C 3031651 Desulfuromonadia 0.03 5 0 O 69541 Desulfuromonadales 0.03 5 0 F 213421 Desulfuromonadaceae 0.03 5 4 G 890 Desulfuromonas 0.01 1 1 S 1603606 Desulfuromonas soudanensis 0.03 4 0 O 3031668 Geobacterales 0.03 4 4 F 213422 Geobacteraceae 0.02 3 0 C 3031449 Desulfovibrionia 0.02 3 0 O 213115 Desulfovibrionales 0.02 3 0 F 194924 Desulfovibrionaceae 0.01 2 2 G 2035811 Pseudodesulfovibrio 0.01 1 0 G 3126915 Taurinivorans 0.01 1 1 S 2787751 Taurinivorans muris 0.01 1 0 C 3024408 Syntrophobacteria 0.01 1 0 O 213462 Syntrophobacterales 0.01 1 0 F 213465 Syntrophobacteraceae 0.01 1 0 G 29526 Syntrophobacter 0.01 1 0 S 119484 Syntrophobacter fumaroxidans 0.01 1 1 S1 335543 Syntrophobacter fumaroxidans MPOB 0.01 1 0 C 3031451 Desulfobulbia 0.01 1 0 O 3024411 Desulfobulbales 0.01 1 0 F 213121 Desulfobulbaceae 0.01 1 0 G 893 Desulfobulbus 0.01 1 1 S 1986146 Desulfobulbus oralis 0.01 1 0 C 3031646 Desulfarculia 0.01 1 0 O 453227 Desulfarculales 0.01 1 0 F 453228 Desulfarculaceae 0.01 1 0 G 3093638 Desulfoferula 0.01 1 1 S 3058419 Desulfoferula mesophila 0.06 9 0 D1 2323 Bacteria incertae sedis 0.06 9 0 D2 1783234 Bacteria candidate phyla 0.06 9 5 P 95818 Candidatus Saccharibacteria 0.03 4 0 C 2093818 Candidatus Saccharimonadia 0.01 2 0 O 2093819 Candidatus Nanosynbacterales 0.01 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.01 2 0 G 2093823 Candidatus Nanosynbacter 0.01 2 2 S 2093824 Candidatus Nanosynbacter lyticus 0.01 2 0 O 2093825 Candidatus Saccharimonadales 0.01 2 0 F 2171986 Candidatus Saccharimonadaceae 0.01 2 0 G 1331051 Candidatus Saccharimonas 0.01 2 2 S 1332188 Candidatus Saccharimonas aalborgensis 0.04 6 0 P 203691 Spirochaetota 0.04 6 0 C 203692 Spirochaetia 0.04 6 0 O 136 Spirochaetales 0.02 3 0 F 1643685 Borreliaceae 0.02 3 2 G 64895 Borreliella 0.01 1 1 S 29519 Borreliella garinii 0.02 3 0 F 2845253 Treponemataceae 0.02 3 0 G 157 Treponema 0.01 2 2 S 162 Treponema phagedenis 0.01 1 1 S 165 Treponema saccharophilum 0.04 6 0 P 29547 Campylobacterota 0.04 6 0 C 3031852 Epsilonproteobacteria 0.04 6 0 O 213849 Campylobacterales 0.04 6 0 F 72293 Helicobacteraceae 0.04 6 0 G 209 Helicobacter 0.03 5 5 S 213 Helicobacter cinaedi 0.01 1 1 S 210 Helicobacter pylori 0.02 3 0 P 2138240 Coprothermobacterota 0.02 3 0 C 2138243 Coprothermobacteria 0.02 3 0 O 2138246 Coprothermobacterales 0.02 3 0 F 2138247 Coprothermobacteraceae 0.02 3 0 G 68335 Coprothermobacter 0.02 3 0 S 35786 Coprothermobacter proteolyticus 0.02 3 3 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.01 2 0 P 200783 Aquificota 0.01 2 0 C 187857 Aquificia 0.01 2 0 O 32069 Aquificales 0.01 1 1 F 64898 Aquificaceae 0.01 1 0 F 224027 Hydrogenothermaceae 0.01 1 1 G 212790 Sulfurihydrogenibium 0.01 2 0 P 200930 Deferribacterota 0.01 2 0 C 68337 Deferribacteres 0.01 2 0 O 191393 Deferribacterales 0.01 1 0 F 2945019 Geovibrionaceae 0.01 1 0 G 46200 Geovibrio 0.01 1 1 S 139438 Geovibrio thiophilus 0.01 1 0 F 2945020 Mucispirillaceae 0.01 1 0 G 248038 Mucispirillum 0.01 1 0 S 248039 Mucispirillum schaedleri 0.01 1 1 S1 1379858 Mucispirillum schaedleri ASF457 0.01 2 0 P 32066 Fusobacteriota 0.01 2 0 C 203490 Fusobacteriia 0.01 2 0 O 203491 Fusobacteriales 0.01 1 0 F 203492 Fusobacteriaceae 0.01 1 1 G 848 Fusobacterium 0.01 1 0 F 1129771 Leptotrichiaceae 0.01 1 1 G 32067 Leptotrichia