0.35 191 191 U 0 unclassified 99.65 54182 3 R 1 root 99.64 54179 0 R1 131567 cellular organisms 99.64 54179 14638 D 2 Bacteria 56.42 30678 347 P 1224 Pseudomonadota 51.31 27899 1763 C 1236 Gammaproteobacteria 39.54 21500 1566 O 91347 Enterobacterales 33.06 17976 2050 F 543 Enterobacteriaceae 16.09 8750 178 G 561 Escherichia 15.58 8471 7929 S 562 Escherichia coli 0.28 152 152 S1 316435 Escherichia coli Nissle 1917 0.22 117 18 S1 83334 Escherichia coli O157:H7 0.15 84 84 S2 155864 Escherichia coli O157:H7 str. EDL933 0.03 14 14 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 1 1 S2 1328859 Escherichia coli O157:H7 str. SS17 0.12 67 67 S1 2079157 Escherichia coli O2:H1 0.08 44 44 S1 1322345 Escherichia coli ATCC 25922 0.08 42 42 S1 2874053 Escherichia coli O25:H1 0.06 34 34 S1 655817 Escherichia coli ABU 83972 0.06 31 31 S1 331112 Escherichia coli HS 0.05 29 29 S1 1446600 Escherichia coli O15:H18 0.03 17 17 S1 244320 Escherichia coli O55:H7 0.01 3 3 S1 362663 Escherichia coli 536 0.00 2 0 S1 1038927 Escherichia coli O104:H4 0.00 2 2 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 1 1 S1 83333 Escherichia coli K-12 0.00 1 1 S1 2605619 Escherichia coli O16:H48 0.00 1 1 S1 439855 Escherichia coli SMS-3-5 0.00 1 1 S1 376725 Escherichia coli O103:H2 0.09 50 50 S 1499973 Escherichia marmotae 0.07 37 37 S 208962 Escherichia albertii 0.02 13 13 S 564 Escherichia fergusonii 0.00 1 1 G1 2608889 unclassified Escherichia 5.12 2784 48 G 590 Salmonella 4.90 2662 672 S 28901 Salmonella enterica 3.66 1990 96 S1 59201 Salmonella enterica subsp. enterica 1.11 604 604 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.76 414 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.70 379 379 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.05 25 25 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.02 10 10 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.40 219 219 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.40 218 10 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.37 201 201 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.01 7 7 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.25 136 136 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.21 114 114 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.13 71 45 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.03 16 16 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.02 10 10 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.05 25 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.05 25 25 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.04 20 20 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.03 18 18 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.03 15 3 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.02 12 12 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.02 10 10 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.02 9 9 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.01 6 6 S2 29474 Salmonella enterica subsp. enterica serovar California 0.01 4 4 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.01 3 3 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 2 2 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 2 2 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 2 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 2 2 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.14 74 0 S 54736 Salmonella bongori 0.14 74 74 S1 1299282 Salmonella bongori CFSAN000510 4.17 2269 0 G 547 Enterobacter 4.14 2252 3 G1 354276 Enterobacter cloacae complex 2.77 1507 1507 S 299767 Enterobacter ludwigii 1.07 583 533 S 158836 Enterobacter hormaechei 0.09 50 50 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.11 58 4 S 550 Enterobacter cloacae 0.10 54 54 S1 336306 Enterobacter cloacae subsp. cloacae 0.11 58 58 S 61645 Enterobacter asburiae 0.06 34 34 S 208224 Enterobacter kobei 0.01 8 8 S 1812935 Enterobacter roggenkampii 0.00 1 1 S 3029761 Enterobacter pasteurii 0.03 16 16 S 881260 Enterobacter bugandensis 0.00 1 0 G1 2608935 unclassified Enterobacter 0.00 1 1 S 2724468 Enterobacter sp. JUb54 1.72 935 0 F1 2890311 Klebsiella/Raoultella group 1.70 927 13 G 570 Klebsiella 1.41 764 646 S 573 Klebsiella pneumoniae 0.13 71 70 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 1 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.09 47 47 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.11 58 10 S 1463165 Klebsiella quasipneumoniae 0.09 48 48 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.04 21 4 S 244366 Klebsiella variicola 0.03 17 17 S1 640131 Klebsiella variicola At-22 0.04 21 21 S 1134687 Klebsiella michiganensis 0.04 20 20 S 548 Klebsiella aerogenes 0.03 18 0 G1 2608929 unclassified Klebsiella 0.02 13 13 S 2851540 Klebsiella sp. PL-2018 0.01 5 5 S 2829835 Klebsiella sp. P1954 0.01 6 6 S 2153354 Klebsiella huaxiensis 0.01 3 3 S 1259973 Klebsiella electrica 0.00 2 2 S 571 Klebsiella oxytoca 0.00 1 1 S 2058152 Klebsiella grimontii 0.01 8 0 G 160674 Raoultella 0.01 6 6 S 54291 Raoultella ornithinolytica 0.00 1 1 S 575 Raoultella planticola 0.00 1 1 S 577 Raoultella terrigena 0.41 223 0 G 620 Shigella 0.39 211 211 S 623 Shigella flexneri 0.02 9 9 S 621 Shigella boydii 0.01 3 3 S 622 Shigella dysenteriae 0.41 222 3 G 544 Citrobacter 0.31 169 0 G1 1344959 Citrobacter freundii complex 0.15 82 82 S 1639133 Citrobacter portucalensis 0.11 58 58 S 67828 Citrobacter gillenii 0.03 19 19 S 546 Citrobacter freundii 0.01 8 0 G2 2816438 unclassified Citrobacter freundii complex 0.01 8 8 S 1686385 Citrobacter sp. BIDMC108 0.00 2 2 S 67827 Citrobacter werkmanii 0.05 26 26 S 2971264 Citrobacter enshiensis 0.04 22 0 S 35703 Citrobacter amalonaticus 0.04 22 22 S1 1261127 Citrobacter amalonaticus Y19 0.00 1 1 S 545 Citrobacter koseri 0.00 1 1 S 67825 Citrobacter rodentium 0.29 157 21 F1 36866 unclassified Enterobacteriaceae 0.12 67 67 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.11 60 60 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.01 4 4 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 3 3 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.00 1 1 S 2675790 Enterobacteriaceae endosymbiont of Macroplea appendiculata 0.00 1 1 S 2675786 Enterobacteriaceae endosymbiont of Donacia thalassina 0.28 151 0 F1 191675 Enterobacteriaceae incertae sedis 0.28 151 2 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.21 114 0 F3 84564 ant endosymbionts 0.11 61 1 G 203804 Candidatus Blochmanniella 0.10 53 14 G1 711328 unclassified Candidatus Blochmanniella 0.07 37 37 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 2 2 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.01 4 4 S 251538 Candidatus Blochmannia ocreatus 0.00 2 2 S 251540 Candidatus Blochmannia vicinus 0.00 1 0 S 251535 Candidatus Blochmanniella vafra 0.00 1 1 S1 859654 Candidatus Blochmanniella vafra str. BVAF 0.10 53 0 G 1699619 Candidatus Westeberhardia 0.10 53 53 S 1594731 Candidatus Westeberhardia cardiocondylae 0.02 13 0 F3 146507 aphid secondary symbionts 0.02 9 9 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.01 3 0 G 568988 Candidatus Regiella 0.01 3 0 G1 3077955 unclassified Candidatus Regiella 0.01 3 3 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.02 10 1 G 1302410 Candidatus Annandia 0.02 9 9 S 1302411 Candidatus Annandia adelgestsuga 0.01 4 0 G 1906660 Candidatus Mikella 0.01 4 4 S 1778264 Candidatus Mikella endobia 0.01 3 0 G 472825 Candidatus Purcelliella 0.01 3 3 S 472834 Candidatus Purcelliella pentastirinorum 0.00 2 0 G 1906659 Candidatus Hoaglandella 0.00 2 2 S 1778263 Candidatus Hoaglandella endobia 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 1 0 G 1906657 Candidatus Doolittlea 0.00 1 1 S 1778262 Candidatus Doolittlea endobia 0.00 1 0 G 1906661 Candidatus Gullanella 0.00 1 1 S 1070130 Candidatus Gullanella endobia 0.26 143 0 G 1330547 Kosakonia 0.25 135 135 S 208223 Kosakonia cowanii 0.01 8 8 S 283686 Kosakonia radicincitans 0.22 120 0 G 2815296 Jejubacter 0.22 120 120 S 2579935 Jejubacter calystegiae 0.10 57 0 G 409304 Candidatus Ishikawella 0.10 57 0 S 168169 Candidatus Ishikawella capsulata 0.10 57 57 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.05 28 0 G 1177214 Candidatus Profftia 0.05 26 0 G1 2735709 unclassified Candidatus Profftia 0.05 26 26 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 2 2 S 1987921 Candidatus Profftia lariciata 0.05 28 0 G 1048757 Candidatus Moranella 0.05 28 28 S 1048758 Candidatus Moranella endobia 0.04 22 0 G 2303321 Superficieibacter 0.04 22 0 G1 2645744 unclassified Superficieibacter 0.04 22 22 S 3031919 Superficieibacter sp. HKU1 0.03 16 0 G 1330545 Lelliottia 0.03 16 16 S 61646 Lelliottia amnigena 0.01 7 0 G 2726810 Scandinavium 0.01 7 7 S 1851514 Scandinavium goeteborgense 0.01 5 0 G 1335483 Shimwellia 0.01 5 5 S 563 Shimwellia blattae 0.01 4 0 G 702 Plesiomonas 0.01 4 4 S 703 Plesiomonas shigelloides 0.00 2 1 G 413496 Cronobacter 0.00 1 1 S 413497 Cronobacter dublinensis 0.00 1 1 G 401618 Candidatus Riesia 0.00 1 1 G 158483 Cedecea 0.00 1 0 G 83654 Leclercia 0.00 1 1 S 83655 Leclercia adecarboxylata 1.81 986 0 F 2812006 Bruguierivoracaceae 1.81 986 0 G 84565 Sodalis 1.51 819 819 S 2697027 Sodalis ligni 0.27 149 0 S 1486991 Candidatus Sodalis pierantonius 0.27 149 149 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.02 12 0 G1 2636512 unclassified Sodalis 0.02 12 12 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.01 6 6 S 1239307 Sodalis praecaptivus 0.78 423 1 F 1903411 Yersiniaceae 0.49 264 2 G 613 Serratia 0.33 178 177 S 138074 Serratia symbiotica 0.00 1 1 S1 3066236 Serratia symbiotica (Periphyllus acericola) 0.08 41 41 S 614 Serratia liquefaciens 0.04 20 20 S 61652 Serratia rubidaea 0.03 14 0 S 82996 Serratia plymuthica 0.03 14 14 S1 1006598 Serratia plymuthica RVH1 0.01 8 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.01 8 8 S 2785630 Serratia sp. CMO1 0.00 1 0 S 2338073 Serratia inhibens 0.00 1 1 S1 1154756 Serratia inhibens PRI-2C 0.26 140 0 G 629 Yersinia 0.22 118 0 G1 1649845 Yersinia pseudotuberculosis complex 0.22 118 2 S 632 Yersinia pestis 0.18 99 99 S1 748678 Yersinia pestis str. Pestoides B 0.02 11 11 S1 360102 Yersinia pestis Antiqua 0.01 6 6 S1 649716 Yersinia pestis Pestoides G 0.04 21 21 S 935293 Yersinia entomophaga 0.00 1 1 S 630 Yersinia enterocolitica 0.03 16 16 G 1927833 Candidatus Fukatsuia 0.00 1 0 G 34037 Rahnella 0.00 1 1 S 2816248 Rahnella bonaserana 0.00 1 0 G 1745211 Chania 0.00 1 0 S 1639108 Chania multitudinisentens 0.00 1 1 S1 1441930 Chania multitudinisentens RB-25 0.40 215 10 F 1903414 Morganellaceae 0.12 65 0 G 581 Morganella 0.12 65 62 S 582 Morganella morganii 0.01 3 3 S1 180434 Morganella morganii subsp. morganii 0.08 44 10 G 637 Arsenophonus 0.04 22 22 S 638 Arsenophonus nasoniae 0.02 11 0 G1 2627083 unclassified Arsenophonus 0.01 7 7 S 3041619 Arsenophonus sp. aPb 0.01 4 4 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.08 42 1 G 583 Proteus 0.07 40 40 S 584 Proteus mirabilis 0.00 1 0 S 1574161 Proteus terrae 0.00 1 1 S1 626774 Proteus terrae subsp. cibarius 0.04 24 23 G 29487 Photorhabdus 0.00 1 0 S 2218628 Photorhabdus laumondii 0.00 1 1 S1 141679 Photorhabdus laumondii subsp. laumondii 0.04 20 0 G 626 Xenorhabdus 0.03 15 0 S 40577 Xenorhabdus poinarii 0.03 15 15 S1 1354304 Xenorhabdus poinarii G6 0.01 3 3 S 290110 Xenorhabdus budapestensis 0.00 2 2 S 351671 Xenorhabdus doucetiae 0.02 10 0 G 586 Providencia 0.01 7 0 S 516075 Providencia sneebia 0.01 7 7 S1 1141660 Providencia sneebia DSM 19967 0.01 3 3 S 1715285 Candidatus Providencia siddallii 0.30 164 0 F 1903410 Pectobacteriaceae 0.18 97 28 G 204037 Dickeya 0.09 47 47 S 1089444 Dickeya solani 0.02 12 12 S 1778540 Dickeya fangzhongdai 0.02 9 0 S 204038 Dickeya dadantii 0.02 9 9 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 1 1 S 204042 Dickeya zeae 0.12 67 0 G 122277 Pectobacterium 0.07 38 31 S 1905730 Pectobacterium parmentieri 0.01 7 7 S1 561231 Pectobacterium parmentieri WPP163 0.04 22 22 S 2488639 Pectobacterium versatile 0.01 5 5 S 2485124 Pectobacterium polonicum 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 0 G1 2627739 unclassified Pectobacterium 0.00 1 1 S 2738983 Pectobacterium sp. PL64 0.19 105 2 F 1903409 Erwiniaceae 0.09 49 0 G 53335 Pantoea 0.06 32 32 S 59814 Pantoea dispersa 0.03 14 14 S 1235990 Candidatus Pantoea carbekii 0.00 2 2 S 66269 Pantoea stewartii 0.00 1 0 G1 1654067 Pantoea agglomerans group 0.00 1 1 S 549 Pantoea agglomerans 0.05 28 0 G 551 Erwinia 0.05 25 0 G1 2622719 unclassified Erwinia 0.05 25 25 S 215689 Erwinia sp. Ejp617 0.01 3 3 S 1922217 Candidatus Erwinia haradaeae 0.03 19 0 G 32199 Buchnera 0.03 19 12 S 9 Buchnera aphidicola 0.01 4 4 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 2 2 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.00 1 1 S1 1470492 Buchnera aphidicola (Aphis aurantii) 0.01 5 0 G 2997349 Winslowiella 0.01 5 5 S 92490 Winslowiella toletana 0.00 1 0 G 51228 Wigglesworthia 0.00 1 0 S 51229 Wigglesworthia glossinidia 0.00 1 0 S1 36868 Wigglesworthia glossinidia endosymbiont of Glossina morsitans 0.00 1 1 S2 1142511 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 0.00 1 0 G 2100764 Mixta 0.00 1 1 S 1615494 Mixta intestinalis 0.10 52 0 F 1903412 Hafniaceae 0.10 52 41 G 635 Edwardsiella 0.01 7 7 S 636 Edwardsiella tarda 0.01 4 4 S 67780 Edwardsiella ictaluri 0.02 9 0 F 3120698 Gallaecimonadaceae 0.02 9 1 G 745410 Gallaecimonas 0.01 8 8 S 3029055 Gallaecimonas kandeliae 0.01 4 0 F 1903416 Budviciaceae 0.01 4 0 G 2172100 Limnobaculum 0.01 3 3 S 2498113 Limnobaculum zhutongyuii 0.00 1 1 S 2172103 Limnobaculum parvum 1.83 996 0 O 135625 Pasteurellales 1.83 996 7 F 712 Pasteurellaceae 1.77 963 0 G 713 Actinobacillus 1.75 952 0 S 718 Actinobacillus equuli 1.75 952 952 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.02 11 11 S 157339 Actinobacillus arthritidis 0.01 8 0 G 745 Pasteurella 0.01 8 8 S 747 Pasteurella multocida 0.01 7 0 G 75984 Mannheimia 0.01 6 6 S 85402 Mannheimia granulomatis 0.00 1 1 S 85404 Mannheimia varigena 0.01 5 0 G 2899790 Mergibacter 0.01 5 5 S 221402 Mergibacter septicus 0.01 4 0 G 724 Haemophilus 0.01 4 4 S 729 Haemophilus parainfluenzae 0.00 2 0 G 155493 Gallibacterium 0.00 2 2 S 750 Gallibacterium anatis 1.62 880 0 O 2887326 Moraxellales 1.62 880 17 F 468 Moraxellaceae 0.84 455 10 G 469 Acinetobacter 0.75 406 1 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.55 299 299 S 470 Acinetobacter baumannii 0.19 104 104 S 48296 Acinetobacter pittii 0.00 1 1 S 106654 Acinetobacter nosocomialis 0.00 1 1 S 1530123 Acinetobacter seifertii 0.03 17 17 S 202956 Acinetobacter towneri 0.02 11 9 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2714110 Acinetobacter sp. Marseille-Q1620 0.00 1 1 S 3151496 Acinetobacter sp. ANC 7955 0.02 10 10 S 40214 Acinetobacter johnsonii 0.00 1 1 S 28090 Acinetobacter lwoffii 0.72 392 337 G 475 Moraxella 0.07 40 40 S 2904120 Moraxella nasibovis 0.01 6 6 S 34062 Moraxella osloensis 0.01 4 4 S 90241 Moraxella lincolnii 0.00 2 2 S 476 Moraxella bovis 0.00 1 0 G1 2685852 unclassified Moraxella 0.00 1 1 S 2904123 Moraxella sp. ZY210820 0.00 1 1 S 2904119 Moraxella haemolytica 0.00 1 1 S 2904121 Moraxella nasovis 0.03 15 10 G 497 Psychrobacter 0.01 5 5 G1 196806 unclassified Psychrobacter 0.00 1 0 G 2824158 Aquirhabdus 0.00 1 1 S 2283318 Aquirhabdus parva 1.33 723 0 O 135623 Vibrionales 1.33 723 62 F 641 Vibrionaceae 0.98 532 6 G 662 Vibrio 0.67 366 0 S 52443 Vibrio tapetis 0.67 366 366 S1 1671868 Vibrio tapetis subsp. tapetis 0.10 54 54 S 666 Vibrio cholerae 0.06 32 3 G1 2614977 unclassified Vibrio 0.05 28 28 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.05 29 0 G1 717610 Vibrio harveyi group 0.04 24 24 S 670 Vibrio parahaemolyticus 0.01 4 4 S 669 Vibrio harveyi 0.00 1 1 S 663 Vibrio alginolyticus 0.04 21 21 S 2572923 Vibrio taketomensis 0.01 8 0 G1 87806 environmental samples 0.01 8 8 S 114054 uncultured Vibrio sp. 0.01 6 6 S 29495 Vibrio navarrensis 0.01 4 4 S 104609 Vibrio penaeicida 0.01 3 1 S 672 Vibrio vulnificus 0.00 2 2 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 1 S 2662262 Vibrio algicola 0.00 1 0 G1 1891919 Vibrio oreintalis group 0.00 1 1 S 29498 Vibrio tubiashii 0.00 1 0 S 55601 Vibrio anguillarum 0.00 1 1 S1 42323 Vibrio anguillarum serovar O1 0.23 125 2 G 657 Photobacterium 0.15 84 24 S 553611 Photobacterium leiognathi 0.11 60 60 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.07 39 0 S 38293 Photobacterium damselae 0.06 30 30 S1 38294 Photobacterium damselae subsp. piscicida 0.02 9 9 S1 85581 Photobacterium damselae subsp. damselae 0.01 4 0 G 511678 Aliivibrio 0.01 4 0 S 40269 Aliivibrio salmonicida 0.01 4 4 S1 316275 Aliivibrio salmonicida LFI1238 1.16 633 0 O 135624 Aeromonadales 1.16 633 88 F 84642 Aeromonadaceae 0.63 341 6 G 642 Aeromonas 0.50 271 271 S 654 Aeromonas veronii 0.06 32 32 S 652 Aeromonas schubertii 0.04 22 0 G1 257493 unclassified Aeromonas 0.04 20 20 S 2560029 Aeromonas sp. 2692-1 0.00 2 2 S 2920537 Aeromonas sp. 19NY04SH05-1 0.01 8 8 S 648 Aeromonas caviae 0.00 2 2 S 645 Aeromonas salmonicida 0.34 186 0 G 225143 Oceanisphaera 0.34 186 186 S 1903694 Oceanisphaera avium 0.03 18 0 G 43947 Tolumonas 0.03 18 18 S 43948 Tolumonas auensis 0.56 302 7 O 135622 Alteromonadales 0.25 136 1 F 267890 Shewanellaceae 0.25 134 17 G 22 Shewanella 0.12 67 67 S 62322 Shewanella baltica 0.04 24 24 S 712036 Shewanella dokdonensis 0.03 16 16 S 2018305 Shewanella bicestrii 0.01 8 6 G1 196818 unclassified Shewanella 0.00 1 1 S 2590015 Shewanella sp. SNU WT4 0.00 1 1 S 2601269 Shewanella sp. YLB-09 0.00 2 2 S 332186 Shewanella xiamenensis 0.00 1 0 G 2547964 Parashewanella 0.00 1 1 S 342950 Parashewanella spongiae 0.23 124 0 F 72275 Alteromonadaceae 0.22 122 0 F1 2903219 Alteromonas/Salinimonas group 0.22 122 0 G 226 Alteromonas 0.22 121 0 G1 2614992 unclassified Alteromonas 0.22 121 121 S 2267264 Alteromonas sp. RKMC-009 0.00 1 1 S 589873 Alteromonas australica 0.00 2 2 G 261825 Agarivorans 0.06 33 0 F 267888 Pseudoalteromonadaceae 0.03 19 0 G 2834759 Flocculibacter 0.03 19 19 S 2744479 Flocculibacter collagenilyticus 0.03 14 0 G 53246 Pseudoalteromonas 0.03 14 0 G1 194690 unclassified Pseudoalteromonas 0.02 12 12 S 2785910 Pseudoalteromonas sp. A41-2 0.00 2 2 S 649161 Pseudoalteromonas sp. 3J6 0.00 2 0 F 267889 Colwelliaceae 0.00 2 2 G 1518149 Thalassotalea 0.48 260 0 O 72274 Pseudomonadales 0.47 254 5 F 135621 Pseudomonadaceae 0.44 240 39 G 286 Pseudomonas 0.13 68 0 G1 136845 Pseudomonas putida group 0.12 67 67 S 303 Pseudomonas putida 0.00 1 1 S 78327 Pseudomonas mosselii 0.12 63 0 G1 196821 unclassified Pseudomonas 0.11 60 60 S 2025658 Pseudomonas sp. NS1(2017) 0.00 2 2 S 2954086 Pseudomonas sp. FP2196 0.00 1 1 S 2654238 Pseudomonas sp. DTU12.1 0.09 51 0 G1 136841 Pseudomonas aeruginosa group 0.09 51 51 S 287 Pseudomonas aeruginosa 0.01 7 0 G1 136843 Pseudomonas fluorescens group 0.01 6 0 S 47883 Pseudomonas synxantha 0.01 6 6 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 47878 Pseudomonas azotoformans 0.01 3 3 S 1198456 Pseudomonas guguanensis 0.00 2 2 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 2 2 S 437900 Pseudomonas marincola 0.00 1 1 S 2738125 Pseudomonas hefeiensis 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 930166 Pseudomonas brassicacearum 0.00 1 1 S 321846 Pseudomonas simiae 0.00 1 1 S 244566 Pseudomonas lurida 0.01 4 0 G 2901164 Stutzerimonas 0.01 4 0 G1 136846 Stutzerimonas stutzeri group 0.01 3 3 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.01 3 0 G 1654787 Thiopseudomonas 0.01 3 3 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 G 2901189 Halopseudomonas 0.00 1 1 S 2830842 Halopseudomonas nanhaiensis 0.01 6 0 F 2887365 Marinobacteraceae 0.01 6 6 G 2742 Marinobacter 0.48 259 0 C1 118884 Gammaproteobacteria incertae sedis 0.47 254 0 G 1076625 Candidatus Steffania 0.47 254 254 S 1076626 Candidatus Steffania adelgidicola 0.00 2 0 G 198346 Candidatus Palibaumannia 0.00 2 2 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 1 0 C2 32036 sulfur-oxidizing symbionts 0.00 1 0 G 1541743 Candidatus Ruthturnera 0.00 1 1 S 2738852 Candidatus Ruthia endofausta 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 F 412032 Celerinatantimonadaceae 0.00 1 0 G 412033 Celerinatantimonas 0.00 1 1 S 412034 Celerinatantimonas diazotrophica 0.43 233 0 O 135614 Lysobacterales 0.42 228 0 F 32033 Lysobacteraceae 0.40 217 0 G 338 Xanthomonas 0.40 217 217 S 29447 Xanthomonas albilineans 0.01 7 5 G 83618 Pseudoxanthomonas 0.00 2 0 G1 2645906 unclassified Pseudoxanthomonas 0.00 2 2 S 2969308 Pseudoxanthomonas sp. JBR18 0.00 2 1 G 83614 Luteimonas 0.00 1 1 S 2565782 Luteimonas yindakuii 0.00 1 1 G 68 Lysobacter 0.00 1 1 G 40323 Stenotrophomonas 0.01 5 1 F 1775411 Rhodanobacteraceae 0.00 2 2 G 231454 Dyella 0.00 1 0 G 323413 Dokdonella 0.00 1 0 S 323415 Dokdonella koreensis 0.00 1 1 S1 1300342 Dokdonella koreensis DS-123 0.00 1 0 G 1453544 Tahibacter 0.00 1 1 S 2976241 Tahibacter amnicola 0.23 125 0 O 135613 Chromatiales 0.21 116 1 F 1046 Chromatiaceae 0.11 62 1 G 85072 Allochromatium 0.11 61 61 S 553982 Allochromatium tepidum 0.05 27 0 G 156885 Thioflavicoccus 0.05 27 0 S 80679 Thioflavicoccus mobilis 0.05 27 27 S1 765912 Thioflavicoccus mobilis 8321 0.02 12 10 G 61593 Thiorhodovibrio 0.00 2 2 S 77007 Thiorhodovibrio winogradskyi 0.02 11 11 G 1056 Thiocapsa 0.00 2 0 G 67575 Rheinheimera 0.00 2 0 G1 115860 unclassified Rheinheimera 0.00 2 2 S 1763998 Rheinheimera sp. F8 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.01 7 0 F 72276 Ectothiorhodospiraceae 0.01 5 2 G 1335745 Spiribacter 0.01 3 3 S 2182432 Spiribacter halobius 0.00 1 1 G 85108 Halorhodospira 0.00 1 0 G 133193 Alkalilimnicola 0.00 1 0 S 351052 Alkalilimnicola ehrlichii 0.00 1 1 S1 187272 Alkalilimnicola ehrlichii MLHE-1 0.00 1 0 F 2035710 Thioalkalibacteraceae 0.00 1 0 G 2035712 Guyparkeria 0.00 1 1 S 47960 Guyparkeria halophila 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 393764 Candidatus Endoriftia 0.00 1 1 S 393765 Candidatus Endoriftia persephone 0.17 92 1 O 135619 Oceanospirillales 0.14 74 0 F 135620 Oceanospirillaceae 0.08 42 0 G 459520 Neptuniibacter 0.08 42 42 S 651666 Neptuniibacter halophilus 0.04 21 0 G 28253 Marinomonas 0.04 21 21 S 2773454 Marinomonas algicola 0.02 11 10 G 515417 Amphritea 0.00 1 0 G1 981604 environmental samples 0.00 1 1 S 981605 uncultured Amphritea sp. 0.01 8 1 F 28256 Halomonadaceae 0.01 6 1 F1 114403 Zymobacter group 0.01 4 0 G 235572 Candidatus Portiera 0.01 4 4 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 2745 Halomonas 0.00 1 1 G1 2609666 unclassified Halomonas 0.01 4 0 F 2823145 Pleioneaceae 0.01 4 0 G 1502941 Pleionea 0.01 4 4 S 3070815 Pleionea litopenaei 0.01 3 0 F 224379 Hahellaceae 0.01 3 3 G 158481 Hahella 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.00 1 0 F 2066474 Endozoicomonadaceae 0.00 1 0 G 305899 Endozoicomonas 0.00 1 0 G1 2644528 unclassified Endozoicomonas 0.00 1 1 S 3035692 Endozoicomonas sp. 8E 0.07 37 0 O 118969 Legionellales 0.05 26 0 F 444 Legionellaceae 0.05 26 0 G 445 Legionella 0.04 21 0 S 446 Legionella pneumophila 0.04 21 18 S1 91891 Legionella pneumophila subsp. pneumophila 0.01 3 3 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.01 5 5 S 450 Legionella longbeachae 0.02 11 5 F 118968 Coxiellaceae 0.01 6 0 G 254245 Aquicella 0.01 5 5 S 254247 Aquicella siphonis 0.00 1 1 S 254246 Aquicella lusitana 0.05 29 0 O 72273 Thiotrichales 0.04 22 9 F 135616 Piscirickettsiaceae 0.01 6 0 G 2781121 Thiosulfatimonas 0.01 6 6 S 2675054 Thiosulfatimonas sediminis 0.01 5 5 G 2039723 Thiomicrorhabdus 0.00 2 0 G 933 Thiomicrospira 0.00 2 0 G1 2643099 unclassified Thiomicrospira 0.00 2 2 S 3035472 Thiomicrospira sp. R3 0.01 4 0 F 135617 Thiotrichaceae 0.01 4 4 G 1030 Thiothrix 0.00 2 0 F 34064 Francisellaceae 0.00 2 1 G 262 Francisella 0.00 1 1 S 2249302 Francisella marina 0.00 1 0 F 2056687 Fastidiosibacteraceae 0.00 1 0 G 2056696 Cysteiniphilum 0.00 1 0 G1 2610889 unclassified Cysteiniphilum 0.00 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.04 21 0 O 3084968 Thiohalomonadales 0.04 21 0 F 3084969 Thiohalomonadaceae 0.04 21 0 G 2034504 Sulfurivermis 0.04 21 21 S 1972068 Sulfurivermis fontis 0.03 15 0 O 1706369 Cellvibrionales 0.01 7 0 F 1706373 Microbulbiferaceae 0.01 7 0 G 48073 Microbulbifer 0.01 6 6 S 86173 Microbulbifer elongatus 0.00 1 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 2745199 Microbulbifer sp. YPW1 0.01 4 3 F 1706372 Halieaceae 0.00 1 0 G 2847769 Aequoribacter 0.00 1 1 S 2518989 Aequoribacter fuscus 0.01 3 0 F 1706375 Spongiibacteraceae 0.01 3 0 G 1084558 Oceanicoccus 0.01 3 3 S 716816 Oceanicoccus sagamiensis 0.00 1 1 F 1706371 Cellvibrionaceae 0.02 11 0 O 3060226 Steroidobacterales 0.02 11 0 F 2689614 Steroidobacteraceae 0.02 11 0 G 469322 Steroidobacter 0.02 11 11 S 465721 Steroidobacter denitrificans 0.02 9 0 O 135615 Cardiobacteriales 0.01 7 0 F 868 Cardiobacteriaceae 0.01 6 0 G 2717 Cardiobacterium 0.01 5 0 G1 2648856 unclassified Cardiobacterium 0.01 5 5 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 1 1 S 2718 Cardiobacterium hominis 0.00 1 0 G 869 Dichelobacter 0.00 1 1 S 870 Dichelobacter nodosus 0.00 2 0 F 3018589 Ignatzschineriaceae 0.00 1 1 G 112008 Ignatzschineria 0.00 1 0 G 582472 Wohlfahrtiimonas 0.00 1 1 S 400946 Wohlfahrtiimonas chitiniclastica 0.01 7 0 O 135618 Methylococcales 0.01 7 1 F 403 Methylococcaceae 0.01 3 0 G 3135206 Candidatus Methylocalor 0.01 3 3 S 3108543 Candidatus Methylocalor cossyra 0.00 2 0 G 1295378 Methylogaea 0.00 2 2 S 1295382 Methylogaea oryzae 0.00 1 0 G 2822410 Methylotuvimicrobium 0.00 1 0 S 271065 Methylotuvimicrobium alcaliphilum 0.00 1 1 S1 1091494 Methylotuvimicrobium alcaliphilum 20Z 0.00 2 0 O 1240482 Orbales 0.00 2 0 F 1240483 Orbaceae 0.00 2 0 G 2894762 Zophobihabitans 0.00 2 2 S 1635327 Zophobihabitans entericus 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.00 1 0 O 2887327 Kangiellales 0.00 1 0 F 1920240 Kangiellaceae 0.00 1 1 G 261963 Kangiella 2.61 1418 32 C 28211 Alphaproteobacteria 1.53 831 4 O 204457 Sphingomonadales 1.47 797 13 F 41297 Sphingomonadaceae 0.76 414 301 G 13687 Sphingomonas 0.16 89 1 G1 196159 unclassified Sphingomonas 0.16 86 86 S 3062169 Sphingomonas sp. C3-2 0.00 1 1 S 1517554 Sphingomonas sp. HMP9 0.00 1 1 S 2653203 Sphingomonas sp. CL5.1 0.02 9 9 S 2698679 Sphingomonas changnyeongensis 0.02 9 9 S 1176646 Sphingomonas daechungensis 0.00 2 2 S 563996 Sphingomonas hankookensis 0.00 1 1 S 2071607 Sphingomonas rhizophila 0.00 1 1 S 13689 Sphingomonas paucimobilis 0.00 1 1 S 1609977 Sphingomonas hengshuiensis 0.00 1 1 S 2698828 Sphingomonas lacunae 0.67 366 318 G 165696 Novosphingobium 0.06 31 31 S 13688 Novosphingobium capsulatum 0.02 9 9 S 2728851 Novosphingobium olei 0.01 6 3 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 1609758 Novosphingobium sp. P6W 0.00 1 1 S 3079861 Novosphingobium sp. ZN18A2 0.00 1 1 S 3109595 Novosphingobium sp. RL4 0.00 1 1 S 158500 Novosphingobium resinovorum 0.00 1 1 S 2698673 Novosphingobium decolorationis 0.00 2 2 G 1227948 Sphingomicrobium 0.00 1 0 G 2709686 Novosphingopyxis 0.00 1 1 S 2762729 Novosphingopyxis iocasae 0.00 1 0 G 165695 Sphingobium 0.00 1 1 S 1592790 Sphingobium phenoxybenzoativorans 0.05 29 1 F 335929 Erythrobacteraceae 0.03 19 19 G 2800681 Aurantiacibacter 0.01 7 6 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 1 0 G 1041 Erythrobacter 0.00 1 0 G1 2633097 unclassified Erythrobacter 0.00 1 1 S 2653850 Erythrobacter sp. 3-20A1M 0.00 1 0 G 2676755 Croceibacterium 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 1 0 G 2827482 Caenibius 0.00 1 0 G1 2827483 unclassified Caenibius 0.00 1 1 S 2872646 Caenibius sp. WL 0.00 1 0 F 2820280 Sphingosinicellaceae 0.00 1 0 G 2883109 Sandaracinobacteroides 0.00 1 1 S 2759707 Sandaracinobacteroides saxicola 0.69 373 12 O 356 Hyphomicrobiales 0.22 118 0 F 118882 Brucellaceae 0.22 118 111 F1 2826938 Brucella/Ochrobactrum group 0.01 7 4 G 234 Brucella 0.00 2 2 S 94625 Brucella intermedia 0.00 1 0 S 29459 Brucella melitensis 0.00 1 0 S1 645169 Brucella melitensis bv. 2 0.00 1 1 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.19 106 3 F 82115 Rhizobiaceae 0.13 72 57 F1 227290 Rhizobium/Agrobacterium group 0.02 13 11 G 379 Rhizobium 0.00 2 0 S 56730 Rhizobium gallicum 0.00 2 0 S1 142627 Rhizobium gallicum bv. gallicum 0.00 2 2 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.00 2 0 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 1 S 358 Agrobacterium tumefaciens 0.00 1 1 S 1183413 Agrobacterium salinitolerans 0.05 27 0 F1 227292 Sinorhizobium/Ensifer group 0.05 27 0 G 28105 Sinorhizobium 0.05 27 2 S 382 Sinorhizobium meliloti 0.04 24 24 S1 1041157 Sinorhizobium meliloti WSM1022 0.00 1 1 S1 693982 Sinorhizobium meliloti AK83 0.01 3 3 G 34019 Liberibacter 0.00 1 1 G 323620 Shinella 0.08 44 5 F 119045 Methylobacteriaceae 0.07 39 1 G 407 Methylobacterium 0.07 38 0 G1 2615210 unclassified Methylobacterium 0.07 38 38 S 2984843 Methylobacterium sp. FF17 0.06 33 0 F 2813035 Parvibaculaceae 0.06 33 0 G 256616 Parvibaculum 0.06 33 0 S 256618 Parvibaculum lavamentivorans 0.06 33 33 S1 402881 Parvibaculum lavamentivorans DS-1 0.05 29 0 F 69277 Phyllobacteriaceae 0.05 25 0 G 68287 Mesorhizobium 0.03 16 0 G1 325217 unclassified Mesorhizobium 0.03 16 16 S 2082387 Mesorhizobium sp. Pch-S 0.02 9 9 S 2725666 Mesorhizobium terrae 0.01 3 0 G 2911176 Aquibium 0.01 3 3 S 1670800 Aquibium oceanicum 0.00 1 0 G 31988 Aminobacter 0.00 1 0 G1 2644704 unclassified Aminobacter 0.00 1 1 S 2774562 Aminobacter sp. SR38 0.01 8 0 F 2831106 Devosiaceae 0.01 8 5 G 46913 Devosia 0.01 3 3 S 2774137 Devosia rhizoryzae 0.01 7 1 F 45401 Hyphomicrobiaceae 0.01 4 0 G 1484898 Methyloceanibacter 0.01 4 0 G1 2617503 unclassified Methyloceanibacter 0.01 4 4 S 2170729 Methyloceanibacter sp. wino2 0.00 1 1 G 81 Hyphomicrobium 0.00 1 0 G 1068 Rhodomicrobium 0.00 1 1 S 2498452 Rhodomicrobium lacus 0.01 4 2 F 335928 Xanthobacteraceae 0.00 1 0 G 99 Ancylobacter 0.00 1 1 S 223390 Ancylobacter polymorphus 0.00 1 0 G 556257 Pseudolabrys 0.00 1 0 G1 2638514 unclassified Pseudolabrys 0.00 1 1 S 2562284 Pseudolabrys sp. FHR47 0.01 3 1 F 255475 Aurantimonadaceae 0.00 2 0 G 182269 Aurantimonas 0.00 2 0 G1 2638230 unclassified Aurantimonas 0.00 2 2 S 2906072 Aurantimonas sp. HBX-1 0.00 2 0 F 772 Bartonellaceae 0.00 2 1 G 773 Bartonella 0.00 1 0 G1 2645622 unclassified Bartonella 0.00 1 1 S 3057550 Bartonella sp. TP 0.00 2 0 F 2821832 Stappiaceae 0.00 1 1 G 152161 Stappia 0.00 1 0 G 1406135 Breoghania 0.00 1 0 G1 2624130 unclassified Breoghania 0.00 1 1 S 2304600 Breoghania sp. L-A4 0.00 1 0 F 45404 Beijerinckiaceae 0.00 1 0 G 184923 Methylocapsa 0.00 1 0 G1 2639413 unclassified Methylocapsa 0.00 1 1 S 3041435 Methylocapsa sp. D3K7 0.00 1 0 F 3149309 Methylopilaceae 0.00 1 0 G 2041902 Chenggangzhangella 0.00 1 1 S 1437009 Chenggangzhangella methanolivorans 0.00 1 0 F 3142785 Terrirubraceae 0.00 1 0 G 3142786 Terrirubrum 0.00 1 1 S 2895980 Terrarubrum flagellatum 0.00 1 0 F 41294 Nitrobacteraceae 0.00 1 0 G 374 Bradyrhizobium 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 3139728 Bradyrhizobium sp. 27S5 0.00 1 1 F 31993 Methylocystaceae 0.17 94 1 O 204441 Rhodospirillales 0.09 49 0 F 2844601 Stellaceae 0.09 49 0 G 93 Stella 0.09 49 49 S 94 Stella humosa 0.08 41 0 F 2690195 Elioraeaceae 0.08 41 0 G 457933 Elioraea 0.08 41 41 S 2843330 Elioraea tepida 0.00 2 0 F 41295 Rhodospirillaceae 0.00 2 0 G 1263978 Candidatus Endolissoclinum 0.00 2 2 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 1543705 Nitrospirillum 0.00 1 0 S 3144925 Nitrospirillum viridazoti 0.00 1 1 S1 1441467 Nitrospirillum viridazoti CBAmc 0.06 33 0 O 2800060 Hyphomonadales 0.06 33 0 F 69657 Hyphomonadaceae 0.06 33 33 G 85 Hyphomonas 0.05 26 0 O 204458 Caulobacterales 0.05 26 0 F 76892 Caulobacteraceae 0.04 23 17 G 41275 Brevundimonas 0.01 6 0 G1 2622653 unclassified Brevundimonas 0.01 3 3 S 2560058 Brevundimonas sp. Bb-A 0.01 3 3 S 2591463 Brevundimonas sp. M20 0.00 2 0 G 20 Phenylobacterium 0.00 2 0 S 284016 Phenylobacterium zucineum 0.00 2 2 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 69666 Caulobacter mirabilis 0.02 13 0 O 510684 Sneathiellales 0.02 13 0 F 510685 Sneathiellaceae 0.02 13 0 G 510690 Sneathiella 0.02 13 13 S 2950108 Sneathiella marina 0.01 6 2 O 204455 Rhodobacterales 0.00 2 1 F 31989 Paracoccaceae 0.00 1 0 G 265 Paracoccus 0.00 1 1 S 659350 Paracoccus stylophorae 0.00 2 0 F 2854170 Roseobacteraceae 0.00 1 1 G 74030 Roseovarius 0.00 1 0 G 335927 Thalassovita 0.00 1 1 S 53501 Thalassovita gelatinovora 0.01 3 0 O 2066490 Emcibacterales 0.01 3 0 F 2066491 Emcibacteraceae 0.01 3 0 G 2943291 Pseudemcibacter 0.01 3 3 S 2857064 Pseudemcibacter aquimaris 0.00 2 0 O 766 Rickettsiales 0.00 1 0 F 775 Rickettsiaceae 0.00 1 0 F1 33988 Rickettsieae 0.00 1 0 G 780 Rickettsia 0.00 1 0 G1 114277 spotted fever group 0.00 1 0 S 781 Rickettsia conorii 0.00 1 1 S1 369822 Rickettsia conorii subsp. raoultii 0.00 1 0 F 942 Anaplasmataceae 0.00 1 1 G 768 Anaplasma 0.00 2 0 O 1921002 Holosporales 0.00 2 0 F 44746 Holosporaceae 0.00 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 0 O 2800059 Maricaulales 0.00 1 0 F 2800061 Maricaulaceae 0.00 1 0 G 2004661 Hyphobacterium 0.00 1 0 G1 2638931 unclassified Hyphobacterium 0.00 1 1 S 2749086 Hyphobacterium sp. CCMP332 0.00 1 0 O 1191478 Magnetococcales 0.00 1 0 F 1191479 Magnetococcaceae 0.00 1 0 G 162171 Magnetococcus 0.00 1 0 S 1124597 Magnetococcus marinus 0.00 1 1 S1 156889 Magnetococcus marinus MC-1 0.00 1 0 O 2493627 Minwuiales 0.00 1 0 F 2493628 Minwuiaceae 0.00 1 0 G 2493629 Minwuia 0.00 1 1 G1 2618799 unclassified Minwuia 1.85 1008 259 C 28216 Betaproteobacteria 1.27 688 26 O 80840 Burkholderiales 0.90 492 115 F 80864 Comamonadaceae 0.53 286 282 G 80865 Delftia 0.01 3 3 S 180282 Delftia tsuruhatensis 0.00 1 1 S 558537 Delftia lacustris 0.09 49 2 G 28065 Rhodoferax 0.09 47 47 S 2798804 Rhodoferax lithotrophicus 0.04 24 2 G 52972 Polaromonas 0.04 22 1 G1 2638319 unclassified Polaromonas 0.04 21 21 S 296591 Polaromonas sp. JS666 0.02 11 6 G 283 Comamonas 0.01 5 5 S 2743470 Comamonas antarctica 0.01 3 3 G 34072 Variovorax 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 1 S 65656 Hydrogenophaga taeniospiralis 0.00 1 0 G 238749 Diaphorobacter 0.00 1 0 G1 2649760 unclassified Diaphorobacter 0.00 1 1 S 2714925 Diaphorobacter sp. HDW4B 0.19 105 5 F 119060 Burkholderiaceae 0.06 32 2 G 32008 Burkholderia 0.04 23 1 G1 111527 pseudomallei group 0.03 15 1 S 57975 Burkholderia thailandensis 0.03 14 14 S1 1249664 Burkholderia thailandensis 34 0.01 7 6 S 28450 Burkholderia pseudomallei 0.00 1 1 S1 1437000 Burkholderia pseudomallei MSHR1153 0.01 7 0 G1 87882 Burkholderia cepacia complex 0.01 6 6 S 488447 Burkholderia contaminans 0.00 1 0 S 101571 Burkholderia ubonensis 0.00 1 1 S1 1249668 Burkholderia ubonensis MSMB22 0.06 30 8 G 48736 Ralstonia 0.04 22 0 G1 3116862 Ralstonia solanacearum species complex 0.04 22 22 S 305 Ralstonia solanacearum 0.02 12 0 G 106589 Cupriavidus 0.02 12 12 S 164546 Cupriavidus taiwanensis 0.01 8 1 G 1822464 Paraburkholderia 0.01 6 6 S 2571748 Paraburkholderia acidisoli 0.00 1 1 S 2547399 Paraburkholderia pallida 0.01 8 0 G 2038280 Robbsia 0.01 8 0 G1 2636574 unclassified Robbsia 0.01 8 8 S 3149231 Robbsia sp. KACC 23696 0.01 4 0 G 2018044 Candidatus Vallotia 0.01 4 4 S 1177213 Candidatus Vallotia tarda 0.01 4 0 G 2571159 Mycetohabitans 0.01 4 4 S 417203 Mycetohabitans endofungorum 0.00 2 0 G 44013 Polynucleobacter 0.00 1 1 S 576610 Polynucleobacter necessarius 0.00 1 1 S 2081042 Polynucleobacter corsicus 0.07 36 11 F 75682 Oxalobacteraceae 0.02 13 0 G 963 Herbaspirillum 0.02 13 13 S 863372 Herbaspirillum huttiense 0.01 6 2 F1 2895353 Telluria group 0.01 3 0 G 149698 Massilia 0.01 3 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 1 1 S 3064278 Massilia sp. R2A-15 0.00 1 1 S 3126507 Massilia sp. W12 0.00 1 0 G 1522432 Pseudoduganella 0.00 1 1 S 864828 Pseudoduganella umbonata 0.01 3 3 G 29580 Janthinobacterium 0.00 2 0 G 401469 Undibacterium 0.00 2 0 G1 2630295 unclassified Undibacterium 0.00 2 2 S 3048609 Undibacterium sp. CCC3.4 0.00 1 0 G 1344552 Noviherbaspirillum 0.00 1 0 G1 2617509 unclassified Noviherbaspirillum 0.00 1 1 S 2601898 Noviherbaspirillum sp. UKPF54 0.04 21 0 F 506 Alcaligenaceae 0.03 14 0 G 290425 Advenella 0.03 14 14 S 1481665 Advenella alkanexedens 0.01 3 0 G 1472344 Basilea 0.01 3 0 S 1472345 Basilea psittacipulmonis 0.01 3 3 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 2 0 G 305976 Pusillimonas 0.00 2 0 G1 2640016 unclassified Pusillimonas 0.00 2 2 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 1 0 G 222 Achromobacter 0.00 1 1 S 217204 Achromobacter insolitus 0.00 1 0 G 29574 Taylorella 0.00 1 0 S 29575 Taylorella equigenitalis 0.00 1 1 S1 743973 Taylorella equigenitalis ATCC 35865 0.01 5 0 O1 224471 Burkholderiales genera incertae sedis 0.01 3 3 G 32012 Thiomonas 0.00 2 0 G 114248 Tepidimonas 0.00 2 2 S 307486 Tepidimonas taiwanensis 0.01 3 0 F 2975441 Sphaerotilaceae 0.00 2 0 G 34102 Sphaerotilus 0.00 2 2 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 G 93681 Roseateles 0.04 23 0 O 32003 Nitrosomonadales 0.03 19 4 F 32011 Methylophilaceae 0.02 10 10 G 16 Methylophilus 0.01 4 0 G 359407 Methylotenera 0.01 4 0 S 359408 Methylotenera mobilis 0.01 4 4 S1 583345 Methylotenera mobilis JLW8 0.00 1 0 G 404 Methylobacillus 0.00 1 0 S 405 Methylobacillus flagellatus 0.00 1 1 S1 265072 Methylobacillus flagellatus KT 0.00 2 1 F 206379 Nitrosomonadaceae 0.00 1 0 G 914 Nitrosomonas 0.00 1 1 S 44577 Nitrosomonas ureae 0.00 2 0 F 2008790 Thiobacillaceae 0.00 1 0 G 919 Thiobacillus 0.00 1 0 G1 2646513 unclassified Thiobacillus 0.00 1 1 S 3110231 Thiobacillus sp. SCUT-2 0.00 1 0 G 1938335 Sulfuritortus 0.00 1 1 S 1914471 Sulfuritortus calidifontis 0.04 21 0 C1 119066 Betaproteobacteria incertae sedis 0.04 20 0 G 1301080 Candidatus Nasuia 0.04 20 20 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 G 1381133 Candidatus Profftella 0.00 1 1 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.02 12 0 O 206351 Neisseriales 0.02 12 4 F 481 Neisseriaceae 0.01 4 2 G 482 Neisseria 0.00 1 1 S 486 Neisseria lactamica 0.00 1 1 S 487 Neisseria meningitidis 0.01 4 0 G 2593687 Aquella 0.01 4 4 S 2067065 Aquella oligotrophica 0.01 5 0 O 206389 Rhodocyclales 0.01 4 0 F 2008794 Zoogloeaceae 0.01 4 0 G 2891324 Pseudothauera 0.01 4 4 S 2184083 Pseudothauera hydrothermalis 0.00 1 1 F 2008795 Azonexaceae 0.01 6 0 C 1807140 Acidithiobacillia 0.01 6 0 O 225057 Acidithiobacillales 0.01 6 0 F 225058 Acidithiobacillaceae 0.01 6 6 G 119977 Acidithiobacillus 10.80 5872 17 D1 1783272 Terrabacteria group 10.12 5504 32 P 1239 Bacillota 10.00 5435 9 C 91061 Bacilli 9.58 5207 0 O 186826 Lactobacillales 9.46 5141 0 F 81852 Enterococcaceae 9.46 5141 0 G 1350 Enterococcus 9.45 5140 5140 S 1351 Enterococcus faecalis 0.00 1 0 S 1352 Enterococcus faecium 0.00 1 1 S1 1328870 Enterococcus faecium UC7251 0.05 28 0 F 186828 Carnobacteriaceae 0.05 28 27 G 29393 Dolosigranulum 0.00 1 1 S 29394 Dolosigranulum pigrum 0.04 22 1 F 33958 Lactobacillaceae 0.02 13 6 G 46255 Weissella 0.00 2 2 S 1249 Weissella paramesenteroides 0.00 2 2 S 137591 Weissella cibaria 0.00 2 2 S 155866 Weissella soli 0.00 1 1 S 1162633 Weissella diestrammenae 0.00 2 1 G 2742598 Limosilactobacillus 0.00 1 1 S 1613 Limosilactobacillus fermentum 0.00 2 1 G 2759736 Lacticaseibacillus 0.00 1 1 S 3025672 Lacticaseibacillus pabuli 0.00 1 0 G 1578 Lactobacillus 0.00 1 1 S 267818 Lactobacillus kefiranofaciens 0.00 1 0 G 2767887 Ligilactobacillus 0.00 1 1 S 1624 Ligilactobacillus salivarius 0.00 1 0 G 2767842 Lactiplantibacillus 0.00 1 1 S 1590 Lactiplantibacillus plantarum 0.00 1 1 G 1243 Leuconostoc 0.03 15 0 F 1300 Streptococcaceae 0.03 15 6 G 1301 Streptococcus 0.01 3 2 S 1308 Streptococcus thermophilus 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 0 G1 119603 Streptococcus dysgalactiae group 0.00 1 0 S 1334 Streptococcus dysgalactiae 0.00 1 0 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 1 1 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.00 1 1 S 1307 Streptococcus suis 0.00 1 1 S 1310 Streptococcus sobrinus 0.00 1 0 S 1311 Streptococcus agalactiae 0.00 1 1 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 1 1 S 1313 Streptococcus pneumoniae 0.00 1 0 G1 671232 Streptococcus anginosus group 0.00 1 1 S 1328 Streptococcus anginosus 0.00 1 0 F 186827 Aerococcaceae 0.00 1 0 G 2862144 Ruoffia 0.00 1 1 S 87458 Ruoffia tabacinasalis 0.40 219 6 O 1385 Bacillales 0.30 163 14 F 186817 Bacillaceae 0.12 67 0 G 1386 Bacillus 0.05 26 0 G1 653685 Bacillus subtilis group 0.03 15 0 G2 1938374 Bacillus amyloliquefaciens group 0.02 11 11 S 492670 Bacillus velezensis 0.01 3 3 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S 659243 Bacillus siamensis 0.01 8 8 S 1423 Bacillus subtilis 0.01 3 3 S 1648923 Bacillus paralicheniformis 0.04 23 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.04 23 23 S 2841656 Bacillus sp. ZHX3 0.03 17 0 G1 86661 Bacillus cereus group 0.01 8 6 S 1428 Bacillus thuringiensis 0.00 1 1 S1 180850 Bacillus thuringiensis serovar indiana 0.00 1 1 S1 412694 Bacillus thuringiensis str. Al Hakam 0.01 5 5 S 1392 Bacillus anthracis 0.00 2 2 S 1396 Bacillus cereus 0.00 1 1 S 2026186 Bacillus paranthracis 0.00 1 0 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.00 1 1 S 2672567 Bacillus aquiflavi 0.04 21 12 G 400634 Lysinibacillus 0.02 9 9 S 2086577 Lysinibacillus timonensis 0.03 18 18 G 1055323 Aeribacillus 0.02 13 11 G 2837504 Heyndrickxia 0.00 1 1 S 1398 Heyndrickxia coagulans 0.00 1 1 S 38875 Heyndrickxia oleronia 0.01 7 0 G 2005375 Alkalicoccus 0.01 7 7 S 1667239 Alkalicoccus halolimnae 0.01 7 7 G 2893057 Shouchella 0.01 6 0 G 175304 Lentibacillus 0.01 6 6 S 1472767 Lentibacillus amyloliquefaciens 0.01 6 0 G 2893056 Halalkalibacter 0.01 6 6 S 199441 Halalkalibacter krulwichiae 0.00 1 0 G 2685905 Salicibibacter 0.00 1 1 S 2743001 Salicibibacter cibi 0.00 1 0 G 84406 Virgibacillus 0.00 1 1 S 447199 Virgibacillus salarius 0.00 1 0 G 150247 Anoxybacillus 0.00 1 0 S 33934 Anoxybacillus flavithermus 0.00 1 1 S1 491915 Anoxybacillus flavithermus WK1 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.06 34 0 F 90964 Staphylococcaceae 0.06 34 12 G 1279 Staphylococcus 0.03 18 18 S 1280 Staphylococcus aureus 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 1 0 G1 2815305 Staphylococcus intermedius group 0.00 1 1 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 29388 Staphylococcus capitis 0.00 1 1 S 28035 Staphylococcus lugdunensis 0.02 10 0 F 186822 Paenibacillaceae 0.01 7 0 G 44249 Paenibacillus 0.01 5 0 G1 185978 unclassified Paenibacillus 0.01 3 3 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 2 2 S 715179 Paenibacillus sp. sptzw28 0.00 1 1 S 1406 Paenibacillus polymyxa 0.00 1 1 S 2918900 Paenibacillus aurantius 0.01 3 2 G 55080 Brevibacillus 0.00 1 1 S 1393 Brevibacillus brevis 0.01 4 0 O1 539002 Bacillales incertae sedis 0.01 4 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.01 4 4 G 33986 Exiguobacterium 0.00 2 0 F 539738 Gemellaceae 0.00 2 2 G 1378 Gemella 0.06 31 0 C 186801 Clostridia 0.05 28 0 O 186802 Eubacteriales 0.02 10 0 F 31979 Clostridiaceae 0.02 9 0 G 1485 Clostridium 0.01 6 6 S 1502 Clostridium perfringens 0.00 2 0 G1 2614128 unclassified Clostridium 0.00 2 2 S 2483110 Clostridium sp. JN-1 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 0 G 1434026 Oceanirhabdus 0.00 1 0 G1 2675010 unclassified Oceanirhabdus 0.00 1 1 S 2999116 Oceanirhabdus sp. W0125-5 0.01 6 0 F 2937909 Desulfitobacteriaceae 0.01 6 6 G 56112 Dehalobacter 0.01 5 0 F 216572 Oscillospiraceae 0.00 2 0 G 216851 Faecalibacterium 0.00 2 2 S 853 Faecalibacterium prausnitzii 0.00 2 0 G 1263 Ruminococcus 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.00 1 1 S 2564099 Ruminococcus bovis 0.00 1 0 G 946234 Flavonifractor 0.00 1 1 S 292800 Flavonifractor plautii 0.01 4 0 F 186806 Eubacteriaceae 0.01 4 4 G 33951 Acetobacterium 0.00 2 0 F 186807 Peptococcaceae 0.00 2 0 G 2924872 Acididesulfobacillus 0.00 2 2 S 1561005 Acididesulfobacillus acetoxydans 0.00 1 1 F 3085642 Butyricicoccaceae 0.00 2 1 O 3085636 Lachnospirales 0.00 1 0 F 3018741 Cellulosilyticaceae 0.00 1 1 G 698776 Cellulosilyticum 0.00 1 0 O 53433 Halanaerobiales 0.00 1 0 F 53434 Halobacteroidaceae 0.00 1 0 G 28186 Acetohalobium 0.00 1 0 S 28187 Acetohalobium arabaticum 0.00 1 1 S1 574087 Acetohalobium arabaticum DSM 5501 0.01 6 0 C 1737404 Tissierellia 0.01 6 0 O 1737405 Tissierellales 0.01 6 0 F 1570339 Peptoniphilaceae 0.01 6 1 G 162289 Peptoniphilus 0.01 4 4 S 54005 Peptoniphilus harei 0.00 1 1 S 3036303 Peptoniphilus genitalis 0.55 300 1 P 201174 Actinomycetota 0.52 285 22 C 1760 Actinomycetes 0.29 159 7 O 85009 Propionibacteriales 0.28 151 5 F 31957 Propionibacteriaceae 0.26 144 2 G 1912216 Cutibacterium 0.26 142 142 S 1747 Cutibacterium acnes 0.00 1 1 G 29404 Microlunatus 0.00 1 0 G 1912215 Acidipropionibacterium 0.00 1 1 S 1748 Acidipropionibacterium acidipropionici 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 1 G 1839 Nocardioides 0.11 58 0 O 85007 Mycobacteriales 0.06 35 0 F 1653 Corynebacteriaceae 0.06 35 17 G 1716 Corynebacterium 0.01 5 0 S 1717 Corynebacterium diphtheriae 0.01 5 5 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.01 3 0 S 441501 Corynebacterium massiliense 0.01 3 3 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 2 2 S 38289 Corynebacterium jeikeium 0.00 1 1 S 1719 Corynebacterium pseudotuberculosis 0.00 1 1 S 161895 Corynebacterium phocae 0.00 1 1 S 108486 Corynebacterium falsenii 0.00 1 1 S 53374 Corynebacterium coyleae 0.00 1 1 S 2055947 Corynebacterium heidelbergense 0.00 1 1 S 2768834 Corynebacterium zhongnanshanii 0.00 1 1 S 679663 Corynebacterium canis 0.00 1 1 S 43771 Corynebacterium urealyticum 0.02 11 0 F 85025 Nocardiaceae 0.02 9 0 G 1827 Rhodococcus 0.02 9 9 S 37919 Rhodococcus opacus 0.00 1 0 G 1817 Nocardia 0.00 1 1 S 37332 Nocardia seriolae 0.00 1 0 G 2979332 Prescottella 0.00 1 1 S 43767 Prescottella equi 0.02 9 0 F 1762 Mycobacteriaceae 0.02 9 0 G 1763 Mycobacterium 0.01 7 0 G1 77643 Mycobacterium tuberculosis complex 0.01 7 7 S 1773 Mycobacterium tuberculosis 0.00 1 0 G1 2993898 Mycobacterium ulcerans group 0.00 1 1 S 133549 Mycobacterium shottsii 0.00 1 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2675523 Mycobacterium sp. DL440 0.00 2 0 F 2805586 Lawsonellaceae 0.00 2 0 G 1847725 Lawsonella 0.00 2 2 S 1528099 Lawsonella clevelandensis 0.00 1 0 F 85026 Gordoniaceae 0.00 1 1 G 2053 Gordonia 0.04 23 0 O 85011 Kitasatosporales 0.04 23 2 F 2062 Streptomycetaceae 0.04 21 2 G 1883 Streptomyces 0.03 14 7 G1 2593676 unclassified Streptomyces 0.00 2 2 S 2987533 Streptomyces sp. BPPL-273 0.00 1 1 S 2898276 Streptomyces sp. MRC013 0.00 1 1 S 2903645 Streptomyces sp. NBC_00310 0.00 1 1 S 3075198 Streptomyces sp. ITFR-16 0.00 1 1 S 2903660 Streptomyces sp. NBC_00525 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 2 0 G1 629295 Streptomyces griseus group 0.00 2 0 G2 1482561 Streptomyces anulatus subgroup 0.00 2 2 S 1892 Streptomyces anulatus 0.00 1 1 S 83656 Streptomyces tsukubensis 0.00 1 1 S 40318 Streptomyces nodosus 0.00 1 1 S 2599401 Streptomyces qinzhouensis 0.03 15 2 O 85006 Micrococcales 0.02 9 0 F 85023 Microbacteriaceae 0.01 8 8 G 33882 Microbacterium 0.00 1 0 G 76634 Mycetocola 0.00 1 1 S 2079792 Mycetocola zhujimingii 0.01 3 1 F 1268 Micrococcaceae 0.00 1 0 G 32207 Rothia 0.00 1 1 S 43675 Rothia mucilaginosa 0.00 1 1 G 57493 Kocuria 0.00 1 0 F 85019 Brevibacteriaceae 0.00 1 0 G 1696 Brevibacterium 0.00 1 0 G1 2614124 unclassified Brevibacterium 0.00 1 1 S 2777556 Brevibacterium sp. SMBL_HHYL_HB1 0.01 7 0 O 2037 Actinomycetales 0.01 7 1 F 2049 Actinomycetaceae 0.01 6 6 G 2529408 Schaalia 0.00 1 0 O 85008 Micromonosporales 0.00 1 0 F 28056 Micromonosporaceae 0.00 1 0 G 1873 Micromonospora 0.00 1 1 S 2749844 Micromonospora ferruginea 0.02 11 0 C 1497346 Thermoleophilia 0.02 11 1 O 588673 Solirubrobacterales 0.01 7 1 F 2600303 Baekduiaceae 0.01 6 6 G 2600304 Baekduia 0.00 2 0 F 2758916 Paraconexibacteraceae 0.00 2 2 G 2758920 Paraconexibacter 0.00 1 0 F 320583 Conexibacteraceae 0.00 1 0 G 191494 Conexibacter 0.00 1 0 G1 2627773 unclassified Conexibacter 0.00 1 1 S 2812560 Conexibacter sp. SYSU D00693 0.00 1 0 C 84992 Acidimicrobiia 0.00 1 0 O 84993 Acidimicrobiales 0.00 1 0 F 2448023 Ilumatobacteraceae 0.00 1 0 G 682522 Ilumatobacter 0.00 1 0 S 467094 Ilumatobacter coccineus 0.00 1 1 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 1 G 42255 Rubrobacter 0.00 1 0 C 84998 Coriobacteriia 0.00 1 0 O 1643822 Eggerthellales 0.00 1 0 F 1643826 Eggerthellaceae 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.04 22 0 P 200795 Chloroflexota 0.03 18 0 C 32061 Chloroflexia 0.03 18 0 O 32064 Chloroflexales 0.03 18 0 O1 1508594 Chloroflexineae 0.03 18 0 F 1106 Chloroflexaceae 0.03 18 0 G 1107 Chloroflexus 0.03 18 0 S 152260 Chloroflexus aggregans 0.03 18 18 S1 326427 Chloroflexus aggregans DSM 9485 0.00 2 0 C 301297 Dehalococcoidia 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 1 0 O 1202465 Dehalococcoidales 0.00 1 0 F 1202464 Dehalococcoidaceae 0.00 1 1 G 670486 Dehalogenimonas 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.03 19 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.03 19 0 P 1117 Cyanobacteriota 0.03 19 6 C 3028117 Cyanophyceae 0.01 8 0 C1 1301283 Oscillatoriophycideae 0.01 8 0 O 1150 Oscillatoriales 0.01 7 0 F 2934961 Sirenicapillariaceae 0.01 7 0 G 2596745 Limnospira 0.01 7 0 S 147322 Limnospira indica 0.01 7 7 S1 2760438 Limnospira indica BM01 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.00 2 2 O 307595 Gloeobacterales 0.00 2 1 O 1890424 Synechococcales 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 0 G1 2626047 unclassified Synechococcus 0.00 1 1 S 321327 Synechococcus sp. JA-3-3Ab 0.00 1 0 O 1161 Nostocales 0.00 1 0 F 1892259 Aphanizomenonaceae 0.00 1 0 G 752201 Sphaerospermopsis 0.00 1 0 S 984207 Sphaerospermopsis torques-reginae 0.00 1 1 S1 984208 Sphaerospermopsis torques-reginae ITEP-024 0.01 8 3 P 544448 Mycoplasmatota 0.01 4 0 C 31969 Mollicutes 0.01 4 0 O 2085 Mycoplasmatales 0.01 4 0 F 2092 Mycoplasmataceae 0.01 4 3 G 2093 Mycoplasma 0.00 1 0 G1 2683645 unclassified Mycoplasma 0.00 1 1 S 2967302 Mycoplasma sp. 1018B 0.00 1 0 O 2790996 Mycoplasmoidales 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2767358 Mycoplasmopsis 0.00 1 1 S 28903 Mycoplasmopsis bovis 0.00 2 0 P 67819 Armatimonadota 0.00 2 0 C 1663419 Fimbriimonadia 0.00 2 0 O 1663425 Fimbriimonadales 0.00 2 0 F 1663426 Fimbriimonadaceae 0.00 2 0 G 1005038 Fimbriimonas 0.00 2 0 S 1005039 Fimbriimonas ginsengisoli 0.00 2 2 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 4.84 2634 0 D1 1783270 FCB group 4.83 2625 0 D2 68336 Bacteroidota/Chlorobiota group 4.82 2621 0 P 976 Bacteroidota 4.76 2590 0 C 768503 Cytophagia 4.76 2590 1 O 768507 Cytophagales 4.72 2568 0 F 89373 Cytophagaceae 4.72 2568 0 G 107 Spirosoma 4.72 2566 2566 S 2666025 Spirosoma endbachense 0.00 2 2 S 1211326 Spirosoma aerolatum 0.02 12 0 F 2762286 Fulvivirgaceae 0.02 12 0 G 1433993 Chryseolinea 0.02 12 12 S 2321403 Chryseolinea soli 0.02 9 0 F 563798 Cyclobacteriaceae 0.01 8 0 G 246875 Algoriphagus 0.01 6 6 S 388413 Algoriphagus machipongonensis 0.00 2 2 S 1727163 Algoriphagus sanaruensis 0.00 1 0 G 280472 Aquiflexum 0.00 1 0 S 280473 Aquiflexum balticum 0.00 1 1 S1 758820 Aquiflexum balticum DSM 16537 0.04 24 0 C 117743 Flavobacteriia 0.04 24 0 O 200644 Flavobacteriales 0.03 18 0 F 49546 Flavobacteriaceae 0.03 16 0 G 286104 Winogradskyella 0.03 16 16 S 2686077 Winogradskyella forsetii 0.00 1 1 G 237 Flavobacterium 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.01 6 0 F 2762318 Weeksellaceae 0.01 6 0 F1 2782232 Chryseobacterium group 0.01 6 5 G 59732 Chryseobacterium 0.00 1 1 S 651561 Chryseobacterium arthrosphaerae 0.01 4 0 C 200643 Bacteroidia 0.01 3 0 O 171549 Bacteroidales 0.00 2 0 F 171552 Prevotellaceae 0.00 2 1 G 838 Prevotella 0.00 1 1 S 28131 Prevotella intermedia 0.00 1 0 F 815 Bacteroidaceae 0.00 1 0 G 816 Bacteroides 0.00 1 1 S 818 Bacteroides thetaiotaomicron 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 0 F 558415 Marinilabiliaceae 0.00 1 0 G 3129724 Xiashengella 0.00 1 1 S 2949635 Xiashengella succiniciproducens 0.01 3 0 C 117747 Sphingobacteriia 0.01 3 0 O 200666 Sphingobacteriales 0.01 3 0 F 84566 Sphingobacteriaceae 0.00 1 1 G 28453 Sphingobacterium 0.00 1 0 G 376469 Olivibacter 0.00 1 0 G1 2632301 unclassified Olivibacter 0.00 1 1 S 2592345 Olivibacter sp. LS-1 0.00 1 0 G 423349 Mucilaginibacter 0.00 1 0 G1 2617802 unclassified Mucilaginibacter 0.00 1 1 S 2703789 Mucilaginibacter sp. 14171R-50 0.01 4 0 P 1853220 Rhodothermota 0.01 4 0 C 1853222 Rhodothermia 0.01 4 1 O 1853224 Rhodothermales 0.01 3 0 F 563843 Rhodothermaceae 0.01 3 0 G 2893090 Rhodocaloribacter 0.01 3 3 S 2558931 Rhodocaloribacter litoris 0.02 9 0 P 456828 Candidatus Cloacimonadota 0.02 9 0 C 3039863 Candidatus Cloacimonadia 0.02 9 0 O 3039864 Candidatus Cloacimonadales 0.02 9 0 F 3039865 Candidatus Cloacimonadaceae 0.02 9 0 G 456826 Candidatus Cloacimonas 0.02 9 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.02 9 9 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 0.31 167 0 P 508458 Synergistota 0.31 167 0 C 649775 Synergistia 0.31 167 0 O 649776 Synergistales 0.31 167 0 F 649777 Synergistaceae 0.31 167 0 G 81411 Aminomonas 0.31 167 0 S 81412 Aminomonas paucivorans 0.31 167 167 S1 584708 Aminomonas paucivorans DSM 12260 0.08 46 0 D1 1783257 PVC group 0.07 39 0 P 203682 Planctomycetota 0.07 39 3 C 203683 Planctomycetia 0.05 27 0 O 2691354 Pirellulales 0.05 27 0 F 2691357 Pirellulaceae 0.04 21 0 G 265487 Blastopirellula 0.04 21 0 G1 2647022 unclassified Blastopirellula 0.04 21 21 S 2943192 Blastopirellula sp. J2-11 0.01 5 0 G 2795605 Aureliella 0.01 5 5 S 2527968 Aureliella helgolandensis 0.00 1 1 G 2714594 Bremerella 0.01 7 0 O 112 Planctomycetales 0.01 7 0 F 126 Planctomycetaceae 0.01 7 0 G 2795865 Thalassoglobus 0.01 7 7 S 2527994 Thalassoglobus polymorphus 0.00 1 0 O 2691355 Gemmatales 0.00 1 1 F 1914233 Gemmataceae 0.00 1 0 O 2691356 Isosphaerales 0.00 1 1 F 1763524 Isosphaeraceae 0.01 4 0 P 74201 Verrucomicrobiota 0.01 3 0 P1 326457 Verrucomicrobiota incertae sedis 0.01 3 0 G 1541670 Methylacidimicrobium 0.01 3 3 G1 2730358 unclassified Methylacidimicrobium 0.00 1 0 C 414999 Opitutia 0.00 1 0 O 415000 Opitutales 0.00 1 1 F 134623 Opitutaceae 0.01 3 0 P 134625 Kiritimatiellota 0.01 3 0 C 2907184 Tichowtungiia 0.01 3 0 O 2907185 Tichowtungiales 0.01 3 0 F 2907186 Tichowtungiaceae 0.01 3 0 G 2907187 Tichowtungia 0.01 3 3 S 2697043 Tichowtungia aerotolerans 0.08 42 7 P 200940 Thermodesulfobacteriota 0.04 21 0 C 3031449 Desulfovibrionia 0.04 21 0 O 213115 Desulfovibrionales 0.04 21 1 F 194924 Desulfovibrionaceae 0.03 17 17 G 2035811 Pseudodesulfovibrio 0.01 3 0 G 3126915 Taurinivorans 0.01 3 3 S 2787751 Taurinivorans muris 0.01 6 0 C 3031451 Desulfobulbia 0.01 6 0 O 3024411 Desulfobulbales 0.01 6 0 F 213121 Desulfobulbaceae 0.01 6 0 G 893 Desulfobulbus 0.01 6 6 S 1986146 Desulfobulbus oralis 0.01 6 0 C 3031651 Desulfuromonadia 0.01 6 0 O 69541 Desulfuromonadales 0.01 6 0 F 213421 Desulfuromonadaceae 0.01 6 6 G 890 Desulfuromonas 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 0 O 188710 Thermodesulfobacteriales 0.00 1 0 F 3031464 Thermodesulfatatoraceae 0.00 1 0 G 241192 Thermodesulfatator 0.00 1 0 S 171695 Thermodesulfatator indicus 0.00 1 1 S1 667014 Thermodesulfatator indicus DSM 15286 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213465 Syntrophobacteraceae 0.00 1 0 G 29526 Syntrophobacter 0.00 1 0 S 119484 Syntrophobacter fumaroxidans 0.00 1 1 S1 335543 Syntrophobacter fumaroxidans MPOB 0.07 39 0 P 29547 Campylobacterota 0.07 39 0 C 3031852 Epsilonproteobacteria 0.07 39 0 O 213849 Campylobacterales 0.07 38 0 F 72293 Helicobacteraceae 0.07 38 0 G 209 Helicobacter 0.06 31 31 S 213 Helicobacter cinaedi 0.01 7 7 S 210 Helicobacter pylori 0.00 1 0 F 2771471 Sulfurimonadaceae 0.00 1 1 G 202746 Sulfurimonas 0.03 15 0 D1 2323 Bacteria incertae sedis 0.03 15 0 D2 1783234 Bacteria candidate phyla 0.03 14 14 P 95818 Candidatus Saccharibacteria 0.00 1 0 P 1383058 Candidatus Fervidibacterota 0.00 1 0 G 1448928 Candidatus Fervidibacter 0.00 1 1 S 1448929 Candidatus Fervidibacter sacchari 0.03 14 0 P 203691 Spirochaetota 0.03 14 0 C 203692 Spirochaetia 0.03 14 0 O 136 Spirochaetales 0.02 12 0 F 2845253 Treponemataceae 0.02 12 0 G 157 Treponema 0.01 7 7 S 165 Treponema saccharophilum 0.01 5 5 S 162 Treponema phagedenis 0.00 2 0 F 1643685 Borreliaceae 0.00 2 2 G 64895 Borreliella 0.02 11 0 P 3018035 Bdellovibrionota 0.02 11 0 C 3031419 Bacteriovoracia 0.02 11 0 O 2024979 Bacteriovoracales 0.02 11 0 F 263369 Bacteriovoracaceae 0.02 11 0 G 263370 Peredibacter 0.02 11 11 S 28202 Peredibacter starrii 0.02 10 0 P 57723 Acidobacteriota 0.02 9 0 C 533205 Holophagae 0.02 9 0 O 574975 Holophagales 0.02 9 0 F 574976 Holophagaceae 0.01 7 7 G 44675 Geothrix 0.00 2 0 G 3074468 Mesoterricola 0.00 2 2 S 2927980 Mesoterricola sediminis 0.00 1 0 C 204432 Terriglobia 0.00 1 0 O 204433 Terriglobales 0.00 1 0 F 204434 Acidobacteriaceae 0.00 1 0 G 940557 Granulicella 0.00 1 0 S 940614 Granulicella mallensis 0.00 1 1 S1 682795 Granulicella mallensis MP5ACTX8 0.01 8 0 P 2818505 Myxococcota 0.01 8 0 P1 3031711 Polyangia 0.01 8 0 O 3031712 Polyangiales 0.01 5 0 F 49 Polyangiaceae 0.01 5 0 G 50 Chondromyces 0.01 5 5 S 52 Chondromyces crocatus 0.01 3 0 F 1055686 Sandaracinaceae 0.01 3 0 G 1055688 Sandaracinus 0.01 3 3 S 927083 Sandaracinus amylolyticus 0.01 3 0 P 32066 Fusobacteriota 0.01 3 0 C 203490 Fusobacteriia 0.01 3 0 O 203491 Fusobacteriales 0.01 3 0 F 1129771 Leptotrichiaceae 0.01 3 3 G 32067 Leptotrichia 0.00 2 0 P 200918 Thermotogota 0.00 2 1 C 188708 Thermotogae 0.00 1 0 O 1643946 Kosmotogales 0.00 1 0 F 1643948 Kosmotogaceae 0.00 1 0 G 651456 Kosmotoga 0.00 1 0 S 651457 Kosmotoga olearia 0.00 1 1 S1 521045 Kosmotoga olearia TBF 19.5.1