8.64 28 28 U 0 unclassified 91.36 296 2 R 1 root 87.65 284 0 R1 131567 cellular organisms 87.65 284 14 D 2 Bacteria 53.09 172 0 P 1224 Pseudomonadota 43.83 142 15 C 1236 Gammaproteobacteria 17.59 57 0 O 135614 Lysobacterales 17.59 57 0 F 32033 Lysobacteraceae 17.59 57 0 G 338 Xanthomonas 17.59 57 57 S 29447 Xanthomonas albilineans 15.43 50 3 O 91347 Enterobacterales 12.04 39 3 F 543 Enterobacteriaceae 4.63 15 0 G 561 Escherichia 4.63 15 11 S 562 Escherichia coli 0.62 2 2 S1 1322345 Escherichia coli ATCC 25922 0.62 2 2 S1 2079157 Escherichia coli O2:H1 1.85 6 0 G 547 Enterobacter 1.85 6 0 G1 354276 Enterobacter cloacae complex 1.23 4 4 S 299767 Enterobacter ludwigii 0.31 1 1 S 61645 Enterobacter asburiae 0.31 1 1 S 158836 Enterobacter hormaechei 1.85 6 0 F1 2890311 Klebsiella/Raoultella group 1.85 6 0 G 570 Klebsiella 1.85 6 4 S 573 Klebsiella pneumoniae 0.62 2 2 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 1.85 6 0 G 590 Salmonella 1.85 6 1 S 28901 Salmonella enterica 1.54 5 0 S1 59201 Salmonella enterica subsp. enterica 0.62 2 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.31 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.31 1 1 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.31 1 1 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.31 1 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.31 1 1 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.62 2 0 F1 191675 Enterobacteriaceae incertae sedis 0.62 2 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.31 1 0 F3 146507 aphid secondary symbionts 0.31 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.31 1 0 G 1906661 Candidatus Gullanella 0.31 1 1 S 1070130 Candidatus Gullanella endobia 0.31 1 0 G 2815296 Jejubacter 0.31 1 1 S 2579935 Jejubacter calystegiae 1.54 5 0 F 1903409 Erwiniaceae 1.23 4 0 G 551 Erwinia 1.23 4 4 S 1922217 Candidatus Erwinia haradaeae 0.31 1 0 G 32199 Buchnera 0.31 1 1 S 9 Buchnera aphidicola 0.31 1 0 F 1903411 Yersiniaceae 0.31 1 1 G 1927833 Candidatus Fukatsuia 0.31 1 0 F 1903414 Morganellaceae 0.31 1 0 G 581 Morganella 0.31 1 1 S 582 Morganella morganii 0.31 1 0 F 2812006 Bruguierivoracaceae 0.31 1 0 G 84565 Sodalis 0.31 1 1 S 2697027 Sodalis ligni 1.54 5 0 O 135623 Vibrionales 1.54 5 1 F 641 Vibrionaceae 0.93 3 2 G 662 Vibrio 0.31 1 0 G1 717610 Vibrio harveyi group 0.31 1 1 S 669 Vibrio harveyi 0.31 1 0 G 657 Photobacterium 0.31 1 1 S 553611 Photobacterium leiognathi 1.23 4 0 O 72274 Pseudomonadales 1.23 4 1 F 135621 Pseudomonadaceae 0.93 3 0 G 286 Pseudomonas 0.62 2 0 G1 136841 Pseudomonas aeruginosa group 0.62 2 2 S 287 Pseudomonas aeruginosa 0.31 1 0 G1 136845 Pseudomonas putida group 0.31 1 1 S 303 Pseudomonas putida 1.23 4 0 O 135622 Alteromonadales 1.23 4 0 F 267888 Pseudoalteromonadaceae 1.23 4 0 G 2834759 Flocculibacter 1.23 4 4 S 2744479 Flocculibacter collagenilyticus 0.62 2 0 O 135619 Oceanospirillales 0.31 1 0 F 135620 Oceanospirillaceae 0.31 1 0 G 267849 Nitrincola 0.31 1 1 S 2614693 Nitrincola iocasae 0.31 1 0 F 2823145 Pleioneaceae 0.31 1 0 G 1502941 Pleionea 0.31 1 1 S 3070815 Pleionea litopenaei 0.31 1 0 O 72273 Thiotrichales 0.31 1 0 F 2056687 Fastidiosibacteraceae 0.31 1 0 G 2056696 Cysteiniphilum 0.31 1 0 G1 2610889 unclassified Cysteiniphilum 0.31 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.31 1 0 O 2887326 Moraxellales 0.31 1 0 F 468 Moraxellaceae 0.31 1 1 G 475 Moraxella 0.31 1 0 O 1706369 Cellvibrionales 0.31 1 0 F 1706371 Cellvibrionaceae 0.31 1 1 G 2425 Teredinibacter 0.31 1 0 O 135625 Pasteurellales 0.31 1 1 F 712 Pasteurellaceae 0.31 1 0 O 135615 Cardiobacteriales 0.31 1 0 F 868 Cardiobacteriaceae 0.31 1 0 G 2717 Cardiobacterium 0.31 1 0 G1 2648856 unclassified Cardiobacterium 0.31 1 1 S 2866573 Cardiobacterium sp. Marseille-Q4385 4.63 15 0 C 28211 Alphaproteobacteria 3.70 12 0 O 204441 Rhodospirillales 3.70 12 0 F 2844601 Stellaceae 3.70 12 0 G 93 Stella 3.70 12 12 S 94 Stella humosa 0.62 2 0 O 204458 Caulobacterales 0.62 2 0 F 76892 Caulobacteraceae 0.62 2 0 G 41275 Brevundimonas 0.62 2 0 G1 2622653 unclassified Brevundimonas 0.62 2 2 S 2560058 Brevundimonas sp. Bb-A 0.31 1 1 O 356 Hyphomicrobiales 4.63 15 2 C 28216 Betaproteobacteria 1.85 6 0 O 80840 Burkholderiales 1.54 5 0 F 119060 Burkholderiaceae 0.62 2 0 G 47670 Lautropia 0.62 2 2 S 47671 Lautropia mirabilis 0.62 2 0 G 48736 Ralstonia 0.62 2 0 G1 3116862 Ralstonia solanacearum species complex 0.62 2 2 S 305 Ralstonia solanacearum 0.31 1 0 G 2680021 Ephemeroptericola 0.31 1 1 S 2268024 Ephemeroptericola cinctiostellae 0.31 1 1 F 75682 Oxalobacteraceae 1.85 6 1 O 206351 Neisseriales 1.54 5 1 F 481 Neisseriaceae 1.23 4 2 G 482 Neisseria 0.31 1 1 S 485 Neisseria gonorrhoeae 0.31 1 1 S 487 Neisseria meningitidis 0.31 1 0 O 32003 Nitrosomonadales 0.31 1 0 F 206379 Nitrosomonadaceae 0.31 1 1 G 914 Nitrosomonas 24.38 79 8 D1 1783272 Terrabacteria group 14.51 47 3 P 1239 Bacillota 12.35 40 3 C 91061 Bacilli 5.86 19 1 O 1385 Bacillales 3.70 12 1 F 186817 Bacillaceae 1.85 6 1 G 1386 Bacillus 0.93 3 0 G1 653685 Bacillus subtilis group 0.62 2 0 G2 1938374 Bacillus amyloliquefaciens group 0.31 1 1 S 1390 Bacillus amyloliquefaciens 0.31 1 1 S 492670 Bacillus velezensis 0.31 1 1 S 1423 Bacillus subtilis 0.31 1 0 G1 86661 Bacillus cereus group 0.31 1 1 S 1392 Bacillus anthracis 0.31 1 0 G1 1792192 Bacillus altitudinis complex 0.31 1 1 S 293387 Bacillus altitudinis 0.31 1 0 G 2837504 Heyndrickxia 0.31 1 1 S 1398 Heyndrickxia coagulans 0.31 1 0 G 2675232 Neobacillus 0.31 1 0 G1 2675272 unclassified Neobacillus 0.31 1 1 S 3070683 Neobacillus sp. OS1-33 0.31 1 0 G 84406 Virgibacillus 0.31 1 1 S 447199 Virgibacillus salarius 0.31 1 0 G 129337 Geobacillus 0.31 1 0 G1 1505648 Geobacillus thermoleovorans group 0.31 1 1 S 33938 Geobacillus thermocatenulatus 0.31 1 0 G 400634 Lysinibacillus 0.31 1 1 S 28031 Lysinibacillus fusiformis 0.93 3 0 F 90964 Staphylococcaceae 0.93 3 0 G 1279 Staphylococcus 0.62 2 2 S 1280 Staphylococcus aureus 0.31 1 1 S 1286 Staphylococcus simulans 0.31 1 0 F 186820 Listeriaceae 0.31 1 0 G 1637 Listeria 0.31 1 0 S 1638 Listeria ivanovii 0.31 1 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.31 1 1 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.31 1 0 F 186822 Paenibacillaceae 0.31 1 1 G 44249 Paenibacillus 0.31 1 0 F 539738 Gemellaceae 0.31 1 1 G 1378 Gemella 5.56 18 0 O 186826 Lactobacillales 3.09 10 0 F 1300 Streptococcaceae 2.78 9 5 G 1301 Streptococcus 0.62 2 1 S 1308 Streptococcus thermophilus 0.31 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.62 2 2 S 1314 Streptococcus pyogenes 0.31 1 0 G 1357 Lactococcus 0.31 1 1 S 1359 Lactococcus cremoris 1.54 5 1 F 33958 Lactobacillaceae 0.31 1 1 G 46255 Weissella 0.31 1 0 G 2742598 Limosilactobacillus 0.31 1 1 S 1613 Limosilactobacillus fermentum 0.31 1 0 G 2759736 Lacticaseibacillus 0.31 1 1 S 1597 Lacticaseibacillus paracasei 0.31 1 0 G 2767887 Ligilactobacillus 0.31 1 1 S 89059 Ligilactobacillus acidipiscis 0.93 3 0 F 81852 Enterococcaceae 0.93 3 0 G 1350 Enterococcus 0.93 3 3 S 1351 Enterococcus faecalis 0.93 3 0 C 909932 Negativicutes 0.62 2 0 O 1843489 Veillonellales 0.62 2 0 F 31977 Veillonellaceae 0.62 2 1 G 29465 Veillonella 0.31 1 1 S 423477 Veillonella rogosae 0.31 1 0 O 909929 Selenomonadales 0.31 1 0 F 1843491 Selenomonadaceae 0.31 1 0 G 970 Selenomonas 0.31 1 0 G1 2637378 unclassified Selenomonas 0.31 1 1 S 1884263 Selenomonas sp. oral taxon 920 0.31 1 0 C 186801 Clostridia 0.31 1 0 O 186802 Eubacteriales 0.31 1 0 F 216572 Oscillospiraceae 0.31 1 0 G 35829 Acetivibrio 0.31 1 1 S 1677857 Acetivibrio saccincola 4.94 16 1 P 201174 Actinomycetota 4.01 13 1 C 1760 Actinomycetes 1.54 5 1 O 85009 Propionibacteriales 1.23 4 1 F 31957 Propionibacteriaceae 0.93 3 0 G 1912216 Cutibacterium 0.93 3 3 S 1747 Cutibacterium acnes 0.93 3 0 O 85006 Micrococcales 0.62 2 0 F 1268 Micrococcaceae 0.62 2 0 G 32207 Rothia 0.62 2 2 S 2047 Rothia dentocariosa 0.31 1 0 F 2805591 Tropherymataceae 0.31 1 0 G 2038 Tropheryma 0.31 1 1 S 2039 Tropheryma whipplei 0.93 3 0 O 85007 Mycobacteriales 0.93 3 0 F 1653 Corynebacteriaceae 0.93 3 2 G 1716 Corynebacterium 0.31 1 1 S 61592 Corynebacterium durum 0.31 1 0 O 85011 Kitasatosporales 0.31 1 0 F 2062 Streptomycetaceae 0.31 1 1 G 1883 Streptomyces 0.31 1 0 C 84998 Coriobacteriia 0.31 1 0 O 1643822 Eggerthellales 0.31 1 0 F 1643826 Eggerthellaceae 0.31 1 0 G 2005386 Arabiibacter 0.31 1 1 S 1870985 Arabiibacter massiliensis 0.31 1 0 C 1497346 Thermoleophilia 0.31 1 0 O 588674 Thermoleophilales 0.31 1 0 F 320796 Thermoleophilaceae 0.31 1 0 G 192992 Thermoleophilum 0.31 1 1 S 29539 Thermoleophilum album 1.23 4 3 P 544448 Mycoplasmatota 0.31 1 0 O 2790996 Mycoplasmoidales 0.31 1 0 F 2790998 Mycoplasmoidaceae 0.31 1 0 G 2791001 Malacoplasma 0.31 1 0 S 28227 Malacoplasma penetrans 0.31 1 1 S1 272633 Malacoplasma penetrans HF-2 0.93 3 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.93 3 1 P 1117 Cyanobacteriota 0.62 2 2 C 3028117 Cyanophyceae 0.31 1 0 P 200795 Chloroflexota 0.31 1 0 C 388447 Ktedonobacteria 0.31 1 0 O 388448 Ktedonobacterales 0.31 1 0 F 2692416 Ktedonosporobacteraceae 0.31 1 0 G 2692417 Ktedonosporobacter 0.31 1 1 S 2509675 Ktedonosporobacter rubrisoli 2.16 7 0 D1 1783270 FCB group 2.16 7 0 D2 68336 Bacteroidota/Chlorobiota group 1.85 6 0 P 976 Bacteroidota 1.23 4 0 C 200643 Bacteroidia 1.23 4 0 O 171549 Bacteroidales 0.93 3 0 F 815 Bacteroidaceae 0.93 3 0 G 816 Bacteroides 0.93 3 3 S 817 Bacteroides fragilis 0.31 1 0 F 2005520 Dysgonomonadaceae 0.31 1 0 G 156973 Dysgonomonas 0.31 1 1 G1 2630389 unclassified Dysgonomonas 0.62 2 0 C 117743 Flavobacteriia 0.62 2 0 O 200644 Flavobacteriales 0.31 1 1 F 49546 Flavobacteriaceae 0.31 1 0 O1 313602 Flavobacteriales incertae sedis 0.31 1 0 G 336809 Candidatus Karelsulcia 0.31 1 1 S 336810 Candidatus Karelsulcia muelleri 0.31 1 0 P 1853220 Rhodothermota 0.31 1 0 C 1853222 Rhodothermia 0.31 1 0 O 1853224 Rhodothermales 0.31 1 0 F 563843 Rhodothermaceae 0.31 1 0 G 29548 Rhodothermus 0.31 1 0 S 29549 Rhodothermus marinus 0.31 1 1 S1 762570 Rhodothermus marinus SG0.5JP17-172 1.54 5 0 P 200940 Thermodesulfobacteriota 1.23 4 0 C 3031651 Desulfuromonadia 1.23 4 0 O 69541 Desulfuromonadales 1.23 4 0 F 213421 Desulfuromonadaceae 1.23 4 4 G 890 Desulfuromonas 0.31 1 0 C 3031449 Desulfovibrionia 0.31 1 0 O 213115 Desulfovibrionales 0.31 1 0 F 194924 Desulfovibrionaceae 0.31 1 1 G 2035811 Pseudodesulfovibrio 1.23 4 0 P 32066 Fusobacteriota 1.23 4 0 C 203490 Fusobacteriia 1.23 4 0 O 203491 Fusobacteriales 0.93 3 0 F 1129771 Leptotrichiaceae 0.93 3 0 G 32067 Leptotrichia 0.31 1 1 S 157691 Leptotrichia shahii 0.31 1 1 S 554406 Leptotrichia hongkongensis 0.31 1 0 G1 2633022 unclassified Leptotrichia 0.31 1 1 S 1785996 Leptotrichia sp. oral taxon 847 0.31 1 0 F 203492 Fusobacteriaceae 0.31 1 0 G 848 Fusobacterium 0.31 1 1 S 851 Fusobacterium nucleatum 0.62 2 0 D1 1783257 PVC group 0.62 2 0 P 203682 Planctomycetota 0.31 1 1 C 203683 Planctomycetia 0.31 1 0 C 2897345 Candidatus Uabimicrobiia 0.31 1 0 O 2897347 Candidatus Uabimicrobiales 0.31 1 0 F 2897348 Candidatus Uabimicrobiaceae 0.31 1 0 G 2897349 Candidatus Uabimicrobium 0.31 1 1 S 2596890 Candidatus Uabimicrobium amorphum 0.31 1 0 D1 2323 Bacteria incertae sedis 0.31 1 0 D2 1783234 Bacteria candidate phyla 0.31 1 0 P 95818 Candidatus Saccharibacteria 0.31 1 0 C 2093818 Candidatus Saccharimonadia 0.31 1 0 O 2093819 Candidatus Nanosynbacterales 0.31 1 0 F 2093822 Candidatus Nanosynbacteraceae 0.31 1 0 G 2093823 Candidatus Nanosynbacter 0.31 1 1 S 2093824 Candidatus Nanosynbacter lyticus 3.09 10 0 D 10239 Viruses 3.09 10 0 D1 2731341 Duplodnaviria 3.09 10 0 K 2731360 Heunggongvirae 3.09 10 0 P 2731618 Uroviricota 3.09 10 0 C 2731619 Caudoviricetes 3.09 10 0 F 2946170 Straboviridae 3.09 10 0 F1 1198136 Tevenvirinae 3.09 10 0 G 10663 Tequatrovirus 3.09 10 0 S 2844199 Tequatrovirus gee4507 3.09 10 10 S1 2502306 Escherichia phage vB_EcoM_G4507